snp_strain_expt <- count_expt_snps(parasite_expt)##
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|=================================================================| 100%## Get all possible snp categories
snp_strain_sets <- get_snp_sets(snp_strain_expt)## The factor Lp001 has 6 rows.## The factor s1022 has 4 rows.## The factor s1320 has only 1 row.## The factor s2189 has 4 rows.## The factor s2271 has only 1 row.## The factor s2272 has 4 rows.## The factor s2504 has 4 rows.## The factor s5397 has 4 rows.## The factor s5430 has 4 rows.## The factor s5433 has only 1 row.##
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|=================================================================| 100%snp_strain_summary <- snps_vs_genes(parasite_expt, snp_strain_sets)
snp_strain_genes <- snps_vs_intersections(parasite_expt, snp_strain_sets)## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000043, SCAF000050, SCAF000057, SCAF000073, SCAF000092, SCAF000095, SCAF000118, SCAF000125, SCAF000147, SCAF000164, SCAF000175, SCAF000199, SCAF000213, SCAF000219, SCAF000240, SCAF000252, SCAF000254, SCAF000275, SCAF000280, SCAF000290, SCAF000323, SCAF000344, SCAF000348, SCAF000351, SCAF000355, SCAF000365, SCAF000372, SCAF000380, SCAF000383, SCAF000387, SCAF000435, SCAF000462, SCAF000499, SCAF000509, SCAF000516, SCAF000525, SCAF000538, SCAF000557, SCAF000609, SCAF000631, SCAF000633, SCAF000635, SCAF000660, SCAF000667, SCAF000675, SCAF000678, SCAF000694, SCAF000699, SCAF000712, SCAF000718, SCAF000733, SCAF000741, SCAF000742, SCAF000746, SCAF000752, SCAF000756, SCAF000759, SCAF000765, SCAF000770, SCAF000777, SCAF000794, SCAF000795, SCAF000802, SCAF000803, SCAF000810
## - in 'y': SCAF000017, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000044, SCAF000048, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000075, SCAF000076, SCAF000078, SCAF000084, SCAF000096, SCAF000110, SCAF000114, SCAF000117, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000146, SCAF000153, SCAF000165, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000201, SCAF000202, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000239, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000286, SCAF000288, SCAF000292, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000424, SCAF000426, SCAF000446, SCAF000459, SCAF000463, SCAF000465, SCAF000483, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000543, SCAF000544, SCAF000555, SCAF000569, SCAF000575, SCAF000582, SCAF000585, SCAF000588, SCAF000591, SCAF000593, SCAF000598, SCAF000603, SCAF000610, SCAF000611, SCAF000618, SCAF000627, SCAF000644, SCAF000645, SCAF000650, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000720, SCAF000722, SCAF000734, SCAF000737, SCAF000761, SCAF000762, SCAF000772, SCAF000780, SCAF000781, SCAF000789, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000002, SCAF000004, SCAF000005, SCAF000009, SCAF000013, SCAF000015, SCAF000022, SCAF000029, SCAF000031, SCAF000032, SCAF000040, SCAF000043, SCAF000046, SCAF000050, SCAF000054, SCAF000058, SCAF000066, SCAF000073, SCAF000082, SCAF000083, SCAF000085, SCAF000086, SCAF000088, SCAF000090, SCAF000095, SCAF000101, SCAF000103, SCAF000109, SCAF000113, SCAF000118, SCAF000134, SCAF000139, SCAF000141, SCAF000147, SCAF000150, SCAF000152, SCAF000156, SCAF000160, SCAF000167, SCAF000168, SCAF000169, SCAF000179, SCAF000180, SCAF000184, SCAF000190, SCAF000192, SCAF000204, SCAF000210, SCAF000214, SCAF000218, SCAF000219, SCAF000221, SCAF000236, SCAF000242, SCAF000244, SCAF000251, SCAF000252, SCAF000254, SCAF000258, SCAF000260, SCAF000262, SCAF000263, SCAF000270, SCAF000272, SCAF000275, SCAF000276, SCAF000277, SCAF000278, SCAF000282, SCAF000289, SCAF000293, SCAF000297, SCAF000299, SCAF000306, SCAF000307, SCAF000315, SCAF000323, SCAF000325, SCAF000336, SCAF000342, SCAF000344, SCAF000348, SCAF000351, SCAF000352, SCAF000357, SCAF000359, SCAF000361, SCAF000366, SCAF000377, SCAF000378, SCAF000379, SCAF000382, SCAF000383, SCAF000387, SCAF000390, SCAF000393, SCAF000395, SCAF000398, SCAF000399, SCAF000413, SCAF000415, SCAF000416, SCAF000418, SCAF000423, SCAF000431, SCAF000433, SCAF000438, SCAF000441, SCAF000449, SCAF000450, SCAF000452, SCAF000455, SCAF000457, SCAF000462, SCAF000464, SCAF000466, SCAF000472, SCAF000473, SCAF000475, SCAF000478, SCAF000485, SCAF000487, SCAF000489, SCAF000499, SCAF000502, SCAF000504, SCAF000506, SCAF000510, SCAF000519, SCAF000523, SCAF000534, SCAF000545, SCAF000559, SCAF000579, SCAF000583, SCAF000584, SCAF000595, SCAF000596, SCAF000602, SCAF000604, SCAF000606, SCAF000608, SCAF000609, SCAF000613, SCAF000615, SCAF000623, SCAF000624, SCAF000631, SCAF000633, SCAF000635, SCAF000658, SCAF000662, SCAF000663, SCAF000665, SCAF000670, SCAF000675, SCAF000676, SCAF000677, SCAF000678, SCAF000683, SCAF000684, SCAF000686, SCAF000687, SCAF000693, SCAF000694, SCAF000702, SCAF000703, SCAF000706, SCAF000710, SCAF000715, SCAF000718, SCAF000729, SCAF000730, SCAF000733, SCAF000736, SCAF000739, SCAF000740, SCAF000742, SCAF000746, SCAF000747, SCAF000749, SCAF000750, SCAF000751, SCAF000752, SCAF000753, SCAF000754, SCAF000755, SCAF000756, SCAF000757, SCAF000758, SCAF000759, SCAF000764, SCAF000765, SCAF000766, SCAF000768, SCAF000769, SCAF000770, SCAF000771, SCAF000773, SCAF000777, SCAF000786, SCAF000793, SCAF000794, SCAF000795, SCAF000800, SCAF000802, SCAF000810, SCAF000811, SCAF000814, SCAF000819
## - in 'y': SCAF000001, SCAF000025, SCAF000044, SCAF000064, SCAF000068, SCAF000074, SCAF000076, SCAF000132, SCAF000136, SCAF000166, SCAF000171, SCAF000174, SCAF000202, SCAF000211, SCAF000230, SCAF000237, SCAF000249, SCAF000250, SCAF000265, SCAF000271, SCAF000286, SCAF000301, SCAF000314, SCAF000321, SCAF000328, SCAF000358, SCAF000368, SCAF000483, SCAF000496, SCAF000511, SCAF000515, SCAF000532, SCAF000539, SCAF000543, SCAF000544, SCAF000554, SCAF000575, SCAF000582, SCAF000591, SCAF000598, SCAF000601, SCAF000603, SCAF000649, SCAF000707, SCAF000722, SCAF000724, SCAF000737, SCAF000761, SCAF000779, SCAF000781, SCAF000789, SCAF000797, SCAF000799, SCAF000806
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000050, SCAF000060, SCAF000073, SCAF000258, SCAF000342, SCAF000411, SCAF000439, SCAF000518, SCAF000658, SCAF000665, SCAF000678, SCAF000718, SCAF000746, SCAF000794, SCAF000795
## - in 'y': 21, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000770
## - in 'y': 10, 12, 14, 16, 17, 18, 19, 21, 23, 24, 25, 26, 28, 29, 31, 33, 35, 20.2, 03, 04, 05, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000037, SCAF000393, SCAF000746
## - in 'y': 11, 12, 14, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 20.2, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000002, SCAF000046, SCAF000049, SCAF000050, SCAF000066, SCAF000082, SCAF000118, SCAF000138, SCAF000150, SCAF000151, SCAF000154, SCAF000167, SCAF000189, SCAF000195, SCAF000204, SCAF000218, SCAF000234, SCAF000243, SCAF000244, SCAF000246, SCAF000254, SCAF000289, SCAF000293, SCAF000306, SCAF000311, SCAF000332, SCAF000345, SCAF000348, SCAF000359, SCAF000361, SCAF000369, SCAF000375, SCAF000386, SCAF000387, SCAF000391, SCAF000407, SCAF000418, SCAF000444, SCAF000450, SCAF000455, SCAF000456, SCAF000458, SCAF000464, SCAF000478, SCAF000504, SCAF000517, SCAF000521, SCAF000523, SCAF000530, SCAF000609, SCAF000612, SCAF000632, SCAF000640, SCAF000662, SCAF000663, SCAF000665, SCAF000671, SCAF000678, SCAF000718, SCAF000733, SCAF000740, SCAF000742, SCAF000743, SCAF000746, SCAF000747, SCAF000757, SCAF000766, SCAF000768, SCAF000770, SCAF000773, SCAF000775, SCAF000776, SCAF000787, SCAF000794, SCAF000803, SCAF000810
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000038, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000074, SCAF000075, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000172, SCAF000176, SCAF000188, SCAF000191, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000237, SCAF000245, SCAF000248, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000295, SCAF000302, SCAF000310, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000397, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000492, SCAF000495, SCAF000500, SCAF000511, SCAF000512, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000576, SCAF000582, SCAF000585, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000627, SCAF000637, SCAF000649, SCAF000650, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000722, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000058, SCAF000088, SCAF000224, SCAF000275, SCAF000383, SCAF000595, SCAF000648, SCAF000676, SCAF000740, SCAF000742, SCAF000775, SCAF000794, SCAF000814
## - in 'y': 28, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000009, SCAF000278, SCAF000438, SCAF000794
## - in 'y': 10, 11, 12, 13, 16, 21, 22, 23, 24, 34, 35, 02, 03, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000083, SCAF000088, SCAF000254, SCAF000258, SCAF000262, SCAF000282, SCAF000306, SCAF000379, SCAF000383, SCAF000458, SCAF000565, SCAF000623, SCAF000733, SCAF000803
## - in 'y': SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000146, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000118, SCAF000154, SCAF000258, SCAF000376, SCAF000458, SCAF000584, SCAF000612, SCAF000658, SCAF000742, SCAF000766, SCAF000803
## - in 'y': 10, 11, 13, 15, 17, 19, 21, 22, 23, 24, 25, 29, 20.2, 02, 05, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000009, SCAF000023, SCAF000032, SCAF000050, SCAF000054, SCAF000111, SCAF000147, SCAF000150, SCAF000152, SCAF000180, SCAF000219, SCAF000223, SCAF000236, SCAF000246, SCAF000255, SCAF000270, SCAF000275, SCAF000307, SCAF000332, SCAF000348, SCAF000378, SCAF000379, SCAF000382, SCAF000404, SCAF000406, SCAF000444, SCAF000466, SCAF000467, SCAF000474, SCAF000482, SCAF000613, SCAF000615, SCAF000621, SCAF000635, SCAF000670, SCAF000676, SCAF000678, SCAF000694, SCAF000705, SCAF000710, SCAF000740, SCAF000746, SCAF000747, SCAF000750, SCAF000765, SCAF000766, SCAF000770, SCAF000794, SCAF000800, SCAF000810, SCAF000819
## - in 'y': SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000078, SCAF000080, SCAF000096, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000188, SCAF000191, SCAF000194, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000229, SCAF000230, SCAF000235, SCAF000237, SCAF000239, SCAF000248, SCAF000249, SCAF000250, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000288, SCAF000301, SCAF000310, SCAF000314, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000446, SCAF000447, SCAF000459, SCAF000463, SCAF000465, SCAF000483, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000582, SCAF000585, SCAF000591, SCAF000592, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000644, SCAF000645, SCAF000649, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000734, SCAF000738, SCAF000761, SCAF000772, SCAF000779, SCAF000783, SCAF000789, SCAF000791, SCAF000799, SCAF000804, SCAF000805, SCAF000812, SCAF000813, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000029, SCAF000036, SCAF000050, SCAF000054, SCAF000086, SCAF000101, SCAF000109, SCAF000147, SCAF000163, SCAF000169, SCAF000177, SCAF000180, SCAF000192, SCAF000221, SCAF000226, SCAF000232, SCAF000240, SCAF000246, SCAF000260, SCAF000325, SCAF000350, SCAF000357, SCAF000379, SCAF000383, SCAF000387, SCAF000398, SCAF000408, SCAF000411, SCAF000435, SCAF000441, SCAF000443, SCAF000449, SCAF000458, SCAF000464, SCAF000497, SCAF000513, SCAF000550, SCAF000565, SCAF000612, SCAF000615, SCAF000620, SCAF000635, SCAF000660, SCAF000678, SCAF000683, SCAF000694, SCAF000740, SCAF000746, SCAF000755, SCAF000765, SCAF000773, SCAF000784, SCAF000794, SCAF000803
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000025, SCAF000028, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000062, SCAF000063, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000110, SCAF000114, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000230, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000417, SCAF000426, SCAF000434, SCAF000446, SCAF000459, SCAF000461, SCAF000465, SCAF000483, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000522, SCAF000532, SCAF000539, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000575, SCAF000576, SCAF000577, SCAF000588, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000601, SCAF000603, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000707, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000734, SCAF000735, SCAF000760, SCAF000761, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000789, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000275, SCAF000348, SCAF000474, SCAF000678, SCAF000754, SCAF000803
## - in 'y': 10, 16, 22, 20.2, 03, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000050, SCAF000058, SCAF000066, SCAF000073, SCAF000088, SCAF000090, SCAF000101, SCAF000118, SCAF000139, SCAF000147, SCAF000163, SCAF000195, SCAF000218, SCAF000277, SCAF000282, SCAF000297, SCAF000348, SCAF000351, SCAF000379, SCAF000383, SCAF000387, SCAF000390, SCAF000475, SCAF000487, SCAF000518, SCAF000551, SCAF000612, SCAF000620, SCAF000665, SCAF000670, SCAF000675, SCAF000676, SCAF000677, SCAF000678, SCAF000689, SCAF000702, SCAF000715, SCAF000765, SCAF000778, SCAF000795, SCAF000802, SCAF000803, SCAF000810
## - in 'y': SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000096, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000227, SCAF000230, SCAF000233, SCAF000235, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000301, SCAF000302, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000397, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000434, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000495, SCAF000496, SCAF000511, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000627, SCAF000644, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000782, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000805, SCAF000806, SCAF000812, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000047, SCAF000073, SCAF000082, SCAF000147, SCAF000293, SCAF000387, SCAF000678, SCAF000778
## - in 'y': 16, 26, 02, 05, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000782, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000612, SCAF000718
## - in 'y': 11, 12, 13, 15, 16, 17, 18, 23, 24, 28, 32, 33, 34, 20.1, 20.2, 02, 03, 04, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000387
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 31, 33, 34, 35, 20.1, 20.2, 02, 03, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000002, SCAF000004, SCAF000005, SCAF000009, SCAF000018, SCAF000019, SCAF000022, SCAF000023, SCAF000029, SCAF000030, SCAF000031, SCAF000036, SCAF000042, SCAF000043, SCAF000047, SCAF000049, SCAF000052, SCAF000054, SCAF000056, SCAF000057, SCAF000060, SCAF000066, SCAF000067, SCAF000069, SCAF000070, SCAF000073, SCAF000081, SCAF000085, SCAF000086, SCAF000090, SCAF000091, SCAF000092, SCAF000095, SCAF000101, SCAF000103, SCAF000109, SCAF000111, SCAF000112, SCAF000139, SCAF000144, SCAF000147, SCAF000148, SCAF000150, SCAF000151, SCAF000152, SCAF000154, SCAF000155, SCAF000156, SCAF000158, SCAF000159, SCAF000163, SCAF000164, SCAF000167, SCAF000168, SCAF000169, SCAF000170, SCAF000175, SCAF000177, SCAF000178, SCAF000180, SCAF000183, SCAF000185, SCAF000189, SCAF000190, SCAF000192, SCAF000195, SCAF000196, SCAF000198, SCAF000204, SCAF000212, SCAF000215, SCAF000218, SCAF000219, SCAF000221, SCAF000222, SCAF000223, SCAF000224, SCAF000226, SCAF000228, SCAF000236, SCAF000238, SCAF000240, SCAF000241, SCAF000242, SCAF000244, SCAF000246, SCAF000247, SCAF000251, SCAF000254, SCAF000255, SCAF000257, SCAF000258, SCAF000260, SCAF000262, SCAF000263, SCAF000269, SCAF000274, SCAF000275, SCAF000276, SCAF000277, SCAF000278, SCAF000279, SCAF000283, SCAF000289, SCAF000290, SCAF000294, SCAF000297, SCAF000298, SCAF000299, SCAF000305, SCAF000307, SCAF000308, SCAF000311, SCAF000312, SCAF000315, SCAF000318, SCAF000324, SCAF000325, SCAF000327, SCAF000329, SCAF000331, SCAF000332, SCAF000334, SCAF000339, SCAF000341, SCAF000343, SCAF000344, SCAF000345, SCAF000348, SCAF000349, SCAF000351, SCAF000352, SCAF000353, SCAF000354, SCAF000356, SCAF000360, SCAF000361, SCAF000362, SCAF000365, SCAF000369, SCAF000373, SCAF000375, SCAF000379, SCAF000382, SCAF000384, SCAF000385, SCAF000390, SCAF000392, SCAF000393, SCAF000394, SCAF000395, SCAF000398, SCAF000399, SCAF000404, SCAF000406, SCAF000411, SCAF000412, SCAF000418, SCAF000419, SCAF000422, SCAF000423, SCAF000427, SCAF000429, SCAF000431, SCAF000437, SCAF000441, SCAF000449, SCAF000450, SCAF000455, SCAF000457, SCAF000458, SCAF000462, SCAF000464, SCAF000466, SCAF000467, SCAF000475, SCAF000476, SCAF000478, SCAF000479, SCAF000481, SCAF000482, SCAF000484, SCAF000485, SCAF000487, SCAF000494, SCAF000497, SCAF000498, SCAF000499, SCAF000501, SCAF000502, SCAF000504, SCAF000509, SCAF000510, SCAF000513, SCAF000514, SCAF000516, SCAF000519, SCAF000521, SCAF000534, SCAF000546, SCAF000550, SCAF000551, SCAF000557, SCAF000565, SCAF000571, SCAF000581, SCAF000589, SCAF000595, SCAF000596, SCAF000602, SCAF000606, SCAF000608, SCAF000609, SCAF000612, SCAF000613, SCAF000620, SCAF000621, SCAF000631, SCAF000632, SCAF000633, SCAF000635, SCAF000640, SCAF000642, SCAF000647, SCAF000648, SCAF000660, SCAF000664, SCAF000665, SCAF000667, SCAF000669, SCAF000674, SCAF000675, SCAF000677, SCAF000683, SCAF000684, SCAF000685, SCAF000689, SCAF000691, SCAF000692, SCAF000693, SCAF000694, SCAF000699, SCAF000701, SCAF000702, SCAF000703, SCAF000705, SCAF000706, SCAF000710, SCAF000712, SCAF000715, SCAF000718, SCAF000721, SCAF000728, SCAF000730, SCAF000736, SCAF000741, SCAF000743, SCAF000745, SCAF000747, SCAF000749, SCAF000750, SCAF000751, SCAF000754, SCAF000755, SCAF000757, SCAF000759, SCAF000764, SCAF000765, SCAF000767, SCAF000768, SCAF000769, SCAF000770, SCAF000771, SCAF000773, SCAF000774, SCAF000775, SCAF000776, SCAF000777, SCAF000778, SCAF000784, SCAF000786, SCAF000790, SCAF000793, SCAF000794, SCAF000795, SCAF000796, SCAF000803, SCAF000807, SCAF000809, SCAF000810, SCAF000811, SCAF000817, SCAF000819, SCAF000820
## - in 'y': SCAF000038, SCAF000076, SCAF000096, SCAF000136, SCAF000146, SCAF000166, SCAF000201, SCAF000245, SCAF000314, SCAF000321, SCAF000364, SCAF000388, SCAF000397, SCAF000446, SCAF000495, SCAF000500, SCAF000543, SCAF000575, SCAF000592, SCAF000610, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000724, SCAF000782, SCAF000791
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000736, SCAF000776, SCAF000795, SCAF000810
## - in 'y': 13, 19, 20.2, 02, 04, SCAF000001, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000627, SCAF000637, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000085, SCAF000090, SCAF000195, SCAF000204, SCAF000274, SCAF000277, SCAF000307, SCAF000343, SCAF000348, SCAF000444, SCAF000524, SCAF000613, SCAF000640, SCAF000677, SCAF000715, SCAF000736
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000096, SCAF000097, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000146, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000288, SCAF000295, SCAF000301, SCAF000303, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000722, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000805, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000029, SCAF000244, SCAF000449, SCAF000694
## - in 'y': 14, 02, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000124, SCAF000128, SCAF000136, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000637, SCAF000644, SCAF000645, SCAF000649, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000002, SCAF000005, SCAF000009, SCAF000013, SCAF000022, SCAF000029, SCAF000032, SCAF000036, SCAF000037, SCAF000050, SCAF000054, SCAF000057, SCAF000070, SCAF000082, SCAF000085, SCAF000086, SCAF000090, SCAF000092, SCAF000095, SCAF000101, SCAF000103, SCAF000109, SCAF000111, SCAF000118, SCAF000138, SCAF000139, SCAF000141, SCAF000143, SCAF000147, SCAF000148, SCAF000152, SCAF000161, SCAF000163, SCAF000164, SCAF000167, SCAF000168, SCAF000169, SCAF000175, SCAF000179, SCAF000190, SCAF000195, SCAF000199, SCAF000204, SCAF000207, SCAF000208, SCAF000212, SCAF000213, SCAF000214, SCAF000216, SCAF000218, SCAF000219, SCAF000221, SCAF000223, SCAF000247, SCAF000251, SCAF000252, SCAF000254, SCAF000258, SCAF000263, SCAF000268, SCAF000270, SCAF000272, SCAF000275, SCAF000279, SCAF000280, SCAF000282, SCAF000284, SCAF000297, SCAF000307, SCAF000325, SCAF000327, SCAF000334, SCAF000336, SCAF000346, SCAF000348, SCAF000350, SCAF000351, SCAF000353, SCAF000355, SCAF000359, SCAF000361, SCAF000362, SCAF000376, SCAF000377, SCAF000380, SCAF000381, SCAF000382, SCAF000387, SCAF000389, SCAF000395, SCAF000398, SCAF000412, SCAF000418, SCAF000422, SCAF000427, SCAF000431, SCAF000443, SCAF000449, SCAF000451, SCAF000455, SCAF000462, SCAF000464, SCAF000467, SCAF000473, SCAF000474, SCAF000481, SCAF000493, SCAF000510, SCAF000516, SCAF000520, SCAF000525, SCAF000526, SCAF000571, SCAF000584, SCAF000602, SCAF000608, SCAF000613, SCAF000615, SCAF000621, SCAF000629, SCAF000631, SCAF000635, SCAF000640, SCAF000657, SCAF000658, SCAF000662, SCAF000665, SCAF000667, SCAF000670, SCAF000676, SCAF000677, SCAF000685, SCAF000687, SCAF000693, SCAF000694, SCAF000696, SCAF000703, SCAF000710, SCAF000715, SCAF000718, SCAF000721, SCAF000733, SCAF000736, SCAF000739, SCAF000740, SCAF000741, SCAF000747, SCAF000751, SCAF000752, SCAF000754, SCAF000755, SCAF000756, SCAF000757, SCAF000759, SCAF000765, SCAF000766, SCAF000767, SCAF000768, SCAF000770, SCAF000771, SCAF000773, SCAF000778, SCAF000786, SCAF000793, SCAF000794, SCAF000795, SCAF000809, SCAF000810, SCAF000811
## - in 'y': SCAF000001, SCAF000017, SCAF000025, SCAF000028, SCAF000039, SCAF000044, SCAF000065, SCAF000068, SCAF000074, SCAF000096, SCAF000110, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000191, SCAF000200, SCAF000203, SCAF000230, SCAF000253, SCAF000267, SCAF000271, SCAF000286, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000321, SCAF000328, SCAF000358, SCAF000459, SCAF000463, SCAF000511, SCAF000515, SCAF000532, SCAF000539, SCAF000543, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000582, SCAF000585, SCAF000588, SCAF000591, SCAF000598, SCAF000603, SCAF000610, SCAF000618, SCAF000619, SCAF000644, SCAF000645, SCAF000650, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000682, SCAF000707, SCAF000722, SCAF000727, SCAF000734, SCAF000761, SCAF000772, SCAF000781, SCAF000782, SCAF000797, SCAF000799, SCAF000805, SCAF000806, SCAF000812, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000009, SCAF000032, SCAF000047, SCAF000050, SCAF000060, SCAF000088, SCAF000111, SCAF000118, SCAF000139, SCAF000145, SCAF000147, SCAF000155, SCAF000175, SCAF000178, SCAF000180, SCAF000199, SCAF000219, SCAF000251, SCAF000257, SCAF000258, SCAF000274, SCAF000275, SCAF000290, SCAF000297, SCAF000298, SCAF000312, SCAF000325, SCAF000333, SCAF000355, SCAF000387, SCAF000408, SCAF000418, SCAF000423, SCAF000442, SCAF000455, SCAF000504, SCAF000513, SCAF000531, SCAF000584, SCAF000615, SCAF000624, SCAF000634, SCAF000635, SCAF000663, SCAF000665, SCAF000677, SCAF000703, SCAF000710, SCAF000728, SCAF000733, SCAF000736, SCAF000752, SCAF000765, SCAF000777, SCAF000794, SCAF000795, SCAF000796, SCAF000810
## - in 'y': SCAF000001, SCAF000003, SCAF000017, SCAF000025, SCAF000028, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000074, SCAF000076, SCAF000089, SCAF000096, SCAF000110, SCAF000115, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000165, SCAF000166, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000229, SCAF000230, SCAF000239, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000388, SCAF000397, SCAF000403, SCAF000417, SCAF000447, SCAF000459, SCAF000463, SCAF000465, SCAF000483, SCAF000495, SCAF000500, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000582, SCAF000585, SCAF000588, SCAF000592, SCAF000593, SCAF000598, SCAF000603, SCAF000610, SCAF000618, SCAF000619, SCAF000645, SCAF000649, SCAF000650, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000735, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000806, SCAF000812, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000092, SCAF000147, SCAF000185, SCAF000204, SCAF000236, SCAF000393, SCAF000398, SCAF000415, SCAF000449, SCAF000455, SCAF000504, SCAF000521, SCAF000584, SCAF000635, SCAF000658, SCAF000660, SCAF000677, SCAF000728, SCAF000736, SCAF000752, SCAF000802
## - in 'y': SCAF000001, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000096, SCAF000097, SCAF000110, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000058, SCAF000179, SCAF000293, SCAF000334, SCAF000336, SCAF000381, SCAF000466, SCAF000513, SCAF000733
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000200, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000805, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000085, SCAF000088, SCAF000147, SCAF000155, SCAF000158, SCAF000204, SCAF000219, SCAF000236, SCAF000258, SCAF000262, SCAF000307, SCAF000315, SCAF000325, SCAF000352, SCAF000355, SCAF000387, SCAF000389, SCAF000409, SCAF000431, SCAF000475, SCAF000481, SCAF000621, SCAF000631, SCAF000635, SCAF000665, SCAF000667, SCAF000677, SCAF000689, SCAF000691, SCAF000718, SCAF000725, SCAF000733, SCAF000736, SCAF000765, SCAF000768, SCAF000769, SCAF000770, SCAF000793, SCAF000794
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000038, SCAF000039, SCAF000048, SCAF000051, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000230, SCAF000233, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000582, SCAF000585, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000783, SCAF000789, SCAF000791, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000009, SCAF000019, SCAF000022, SCAF000023, SCAF000026, SCAF000029, SCAF000036, SCAF000037, SCAF000042, SCAF000043, SCAF000047, SCAF000049, SCAF000050, SCAF000054, SCAF000056, SCAF000058, SCAF000066, SCAF000067, SCAF000070, SCAF000085, SCAF000086, SCAF000090, SCAF000092, SCAF000095, SCAF000101, SCAF000103, SCAF000109, SCAF000111, SCAF000112, SCAF000113, SCAF000118, SCAF000125, SCAF000138, SCAF000139, SCAF000140, SCAF000141, SCAF000144, SCAF000147, SCAF000148, SCAF000151, SCAF000152, SCAF000154, SCAF000155, SCAF000156, SCAF000158, SCAF000159, SCAF000160, SCAF000163, SCAF000167, SCAF000168, SCAF000169, SCAF000175, SCAF000177, SCAF000180, SCAF000185, SCAF000189, SCAF000190, SCAF000192, SCAF000196, SCAF000198, SCAF000204, SCAF000219, SCAF000223, SCAF000240, SCAF000241, SCAF000242, SCAF000244, SCAF000247, SCAF000251, SCAF000254, SCAF000255, SCAF000263, SCAF000269, SCAF000270, SCAF000275, SCAF000276, SCAF000277, SCAF000279, SCAF000280, SCAF000282, SCAF000283, SCAF000289, SCAF000290, SCAF000293, SCAF000294, SCAF000297, SCAF000298, SCAF000299, SCAF000306, SCAF000307, SCAF000315, SCAF000323, SCAF000325, SCAF000331, SCAF000332, SCAF000334, SCAF000341, SCAF000342, SCAF000344, SCAF000348, SCAF000351, SCAF000352, SCAF000354, SCAF000355, SCAF000360, SCAF000362, SCAF000373, SCAF000377, SCAF000379, SCAF000382, SCAF000383, SCAF000387, SCAF000392, SCAF000393, SCAF000394, SCAF000395, SCAF000396, SCAF000398, SCAF000399, SCAF000409, SCAF000413, SCAF000418, SCAF000422, SCAF000423, SCAF000431, SCAF000438, SCAF000441, SCAF000449, SCAF000450, SCAF000454, SCAF000457, SCAF000458, SCAF000462, SCAF000464, SCAF000466, SCAF000467, SCAF000472, SCAF000474, SCAF000476, SCAF000481, SCAF000484, SCAF000485, SCAF000497, SCAF000499, SCAF000504, SCAF000510, SCAF000513, SCAF000516, SCAF000519, SCAF000520, SCAF000526, SCAF000550, SCAF000557, SCAF000565, SCAF000581, SCAF000589, SCAF000604, SCAF000606, SCAF000608, SCAF000609, SCAF000612, SCAF000613, SCAF000615, SCAF000620, SCAF000621, SCAF000630, SCAF000631, SCAF000633, SCAF000635, SCAF000642, SCAF000664, SCAF000665, SCAF000667, SCAF000669, SCAF000670, SCAF000676, SCAF000684, SCAF000691, SCAF000693, SCAF000694, SCAF000696, SCAF000699, SCAF000701, SCAF000702, SCAF000705, SCAF000706, SCAF000708, SCAF000710, SCAF000718, SCAF000721, SCAF000725, SCAF000730, SCAF000733, SCAF000736, SCAF000741, SCAF000742, SCAF000743, SCAF000745, SCAF000747, SCAF000750, SCAF000751, SCAF000754, SCAF000757, SCAF000758, SCAF000759, SCAF000764, SCAF000765, SCAF000766, SCAF000767, SCAF000768, SCAF000770, SCAF000771, SCAF000774, SCAF000776, SCAF000777, SCAF000778, SCAF000784, SCAF000786, SCAF000787, SCAF000794, SCAF000795, SCAF000796, SCAF000803, SCAF000807, SCAF000809, SCAF000810, SCAF000819
## - in 'y': SCAF000025, SCAF000028, SCAF000038, SCAF000053, SCAF000065, SCAF000074, SCAF000084, SCAF000096, SCAF000128, SCAF000136, SCAF000146, SCAF000174, SCAF000230, SCAF000239, SCAF000249, SCAF000271, SCAF000286, SCAF000288, SCAF000301, SCAF000314, SCAF000321, SCAF000328, SCAF000388, SCAF000463, SCAF000500, SCAF000515, SCAF000539, SCAF000543, SCAF000569, SCAF000592, SCAF000598, SCAF000645, SCAF000653, SCAF000656, SCAF000673, SCAF000680, SCAF000682, SCAF000727, SCAF000772, SCAF000789
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000147, SCAF000192, SCAF000204, SCAF000241, SCAF000355, SCAF000475, SCAF000615, SCAF000648, SCAF000736, SCAF000754
## - in 'y': SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000002, SCAF000018, SCAF000019, SCAF000050, SCAF000058, SCAF000073, SCAF000147, SCAF000150, SCAF000152, SCAF000154, SCAF000159, SCAF000160, SCAF000164, SCAF000168, SCAF000169, SCAF000185, SCAF000192, SCAF000228, SCAF000236, SCAF000275, SCAF000277, SCAF000280, SCAF000311, SCAF000344, SCAF000348, SCAF000382, SCAF000393, SCAF000395, SCAF000398, SCAF000449, SCAF000455, SCAF000457, SCAF000464, SCAF000473, SCAF000498, SCAF000504, SCAF000506, SCAF000513, SCAF000604, SCAF000608, SCAF000612, SCAF000631, SCAF000635, SCAF000648, SCAF000670, SCAF000691, SCAF000693, SCAF000694, SCAF000715, SCAF000718, SCAF000733, SCAF000736, SCAF000758, SCAF000765, SCAF000785, SCAF000795, SCAF000800, SCAF000810
## - in 'y': SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000039, SCAF000048, SCAF000051, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000096, SCAF000110, SCAF000114, SCAF000119, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000174, SCAF000176, SCAF000188, SCAF000194, SCAF000201, SCAF000202, SCAF000203, SCAF000211, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000388, SCAF000400, SCAF000446, SCAF000461, SCAF000465, SCAF000483, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000532, SCAF000539, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000582, SCAF000585, SCAF000591, SCAF000592, SCAF000598, SCAF000603, SCAF000618, SCAF000619, SCAF000627, SCAF000645, SCAF000649, SCAF000650, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000713, SCAF000717, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000812, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000380, SCAF000795
## - in 'y': 10, 12, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 31, 34, 20.2, 02, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000035
## - in 'y': 10, 13, 14, 15, 16, 17, 18, 19, 21, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000047, SCAF000118, SCAF000139, SCAF000349
## - in 'y': 10, 02, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000014, SCAF000112, SCAF000151, SCAF000293, SCAF000315, SCAF000675, SCAF000745, SCAF000778, SCAF000811
## - in 'y': 14, 02, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000014, SCAF000054, SCAF000066, SCAF000118, SCAF000184, SCAF000315, SCAF000642, SCAF000660, SCAF000678
## - in 'y': 10, 13, 14, 15, 16, 19, 25, 31, 05, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000244, SCAF000481, SCAF000525, SCAF000629, SCAF000694, SCAF000773
## - in 'y': SCAF000001, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000054, SCAF000299, SCAF000455, SCAF000677, SCAF000764, SCAF000810
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000388, SCAF000397, SCAF000400, SCAF000420, SCAF000421, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000449, SCAF000736
## - in 'y': 15, 16, 17, 02, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000019, SCAF000026, SCAF000043, SCAF000067, SCAF000085, SCAF000090, SCAF000092, SCAF000101, SCAF000111, SCAF000144, SCAF000147, SCAF000148, SCAF000163, SCAF000177, SCAF000185, SCAF000198, SCAF000212, SCAF000219, SCAF000223, SCAF000241, SCAF000242, SCAF000247, SCAF000255, SCAF000262, SCAF000274, SCAF000275, SCAF000325, SCAF000327, SCAF000343, SCAF000348, SCAF000351, SCAF000362, SCAF000375, SCAF000385, SCAF000393, SCAF000399, SCAF000412, SCAF000418, SCAF000445, SCAF000467, SCAF000476, SCAF000482, SCAF000513, SCAF000514, SCAF000525, SCAF000557, SCAF000589, SCAF000595, SCAF000606, SCAF000609, SCAF000621, SCAF000635, SCAF000647, SCAF000669, SCAF000693, SCAF000694, SCAF000702, SCAF000710, SCAF000718, SCAF000721, SCAF000728, SCAF000743, SCAF000747, SCAF000754, SCAF000759, SCAF000764, SCAF000765, SCAF000767, SCAF000768, SCAF000770, SCAF000784, SCAF000787, SCAF000795, SCAF000809, SCAF000810
## - in 'y': SCAF000010, SCAF000025, SCAF000028, SCAF000038, SCAF000044, SCAF000048, SCAF000053, SCAF000063, SCAF000065, SCAF000068, SCAF000074, SCAF000076, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000114, SCAF000115, SCAF000121, SCAF000128, SCAF000136, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000191, SCAF000201, SCAF000203, SCAF000206, SCAF000230, SCAF000235, SCAF000239, SCAF000248, SCAF000249, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000288, SCAF000295, SCAF000301, SCAF000303, SCAF000314, SCAF000321, SCAF000328, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000446, SCAF000459, SCAF000463, SCAF000477, SCAF000495, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000582, SCAF000588, SCAF000592, SCAF000598, SCAF000600, SCAF000601, SCAF000610, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000682, SCAF000707, SCAF000717, SCAF000720, SCAF000724, SCAF000734, SCAF000737, SCAF000760, SCAF000772, SCAF000779, SCAF000782, SCAF000789, SCAF000791, SCAF000798, SCAF000799
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000236, SCAF000427, SCAF000677
## - in 'y': 16, 17, 18, 19, 22, 25, 20.2, 05, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000049, SCAF000152, SCAF000163, SCAF000240, SCAF000275, SCAF000277, SCAF000290, SCAF000312, SCAF000325, SCAF000348, SCAF000351, SCAF000382, SCAF000393, SCAF000395, SCAF000399, SCAF000431, SCAF000457, SCAF000466, SCAF000467, SCAF000476, SCAF000482, SCAF000504, SCAF000513, SCAF000596, SCAF000608, SCAF000609, SCAF000613, SCAF000633, SCAF000694, SCAF000701, SCAF000715, SCAF000747, SCAF000755, SCAF000757, SCAF000764, SCAF000765, SCAF000770, SCAF000784, SCAF000810
## - in 'y': SCAF000001, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000039, SCAF000048, SCAF000063, SCAF000064, SCAF000068, SCAF000074, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000096, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000201, SCAF000211, SCAF000229, SCAF000230, SCAF000237, SCAF000239, SCAF000245, SCAF000249, SCAF000250, SCAF000253, SCAF000264, SCAF000265, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000347, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000417, SCAF000446, SCAF000459, SCAF000463, SCAF000465, SCAF000483, SCAF000495, SCAF000496, SCAF000500, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000592, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000761, SCAF000762, SCAF000772, SCAF000780, SCAF000782, SCAF000789, SCAF000791, SCAF000797, SCAF000799, SCAF000804, SCAF000805, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000262
## - in 'y': 12, 13, 14, 16, 19, 24, 28, 30, 32, 34, 35, 04, 05, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000665
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 22, 23, 25, 26, 27, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000047, SCAF000073, SCAF000164, SCAF000195, SCAF000254, SCAF000294, SCAF000348, SCAF000778, SCAF000795
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000420, SCAF000421, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000029, SCAF000088, SCAF000139, SCAF000633, SCAF000770
## - in 'y': 12, 18, 25, 01, 06, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000637, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000058
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 20.1, 20.2, 01, 03, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000224
## - in 'y': 11, 12, 13, 15, 16, 18, 19, 21, 23, 25, 26, 27, 28, 29, 30, 32, 33, 34, 35, 20.2, 01, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000282, SCAF000770
## - in 'y': 12, 14, 15, 16, 17, 18, 19, 21, 23, 24, 25, 26, 27, 33, 35, 01, 04, 05, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000118, SCAF000282, SCAF000455, SCAF000648, SCAF000740, SCAF000742, SCAF000766
## - in 'y': 10, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 35, 20.2, 01, 03, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000662, SCAF000694, SCAF000733
## - in 'y': 12, 14, 15, 17, 19, 23, 24, 31, 01, 05, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000050, SCAF000082, SCAF000147, SCAF000284
## - in 'y': 10, 13, 16, 17, 18, 22, 26, 28, 30, 33, 01, 04, 05, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000383, SCAF000648, SCAF000676
## - in 'y': 12, 17, 18, 19, 22, 27, 30, 33, 34, 20.2, 01, 03, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000218, SCAF000658, SCAF000746
## - in 'y': 11, 12, 13, 14, 15, 17, 18, 19, 22, 23, 24, 27, 29, 31, 32, 01, 03, 04, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000088, SCAF000247, SCAF000387
## - in 'y': 10, 11, 12, 13, 16, 18, 19, 26, 28, 01, 03, 04, 05, 06, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000204, SCAF000633
## - in 'y': 12, 14, 15, 19, 22, 23, 25, 32, 33, 34, 01, 04, 05, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000418, SCAF000450
## - in 'y': 11, 12, 13, 14, 15, 16, 18, 21, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 20.2, 01, 04, 05, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000029, SCAF000218, SCAF000658
## - in 'y': 14, 21, 23, 24, 30, 33, 01, 03, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000297
## - in 'y': 10, 12, 15, 16, 17, 19, 23, 26, 29, 30, 34, 01, 03, 05, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000262, SCAF000404, SCAF000412, SCAF000429
## - in 'y': 12, 16, 18, 25, 01, 03, 06, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000749
## - in 'y': 11, 12, 14, 15, 18, 19, 21, 22, 23, 25, 26, 27, 28, 29, 30, 32, 33, 01, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000736, SCAF000803
## - in 'y': 13, 16, 26, 27, 30, 20.2, 01, 05, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000052, SCAF000111, SCAF000270, SCAF000383
## - in 'y': 11, 12, 13, 14, 15, 16, 18, 22, 24, 28, 30, 01, 03, 04, 05, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000678, SCAF000694, SCAF000742
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 27, 29, 30, 32, 35, 20.2, 01, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000254
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 19, 21, 26, 34, 20.2, 01, 03, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000005, SCAF000765
## - in 'y': 11, 13, 16, 17, 01, 08, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000009, SCAF000101
## - in 'y': 10, 12, 13, 17, 18, 23, 24, 25, 26, 31, 34, 01, 03, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000667, SCAF000764
## - in 'y': 10, 13, 14, 16, 17, 21, 23, 24, 26, 28, 34, 35, 20.2, 01, 02, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000241
## - in 'y': 10, 12, 14, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 28, 30, 31, 32, 33, 34, 20.1, 20.2, 01, 02, 05, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000088, SCAF000118, SCAF000361, SCAF000662
## - in 'y': 12, 13, 14, 15, 18, 19, 21, 22, 23, 32, 20.2, 01, 02, 05, 06, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000332, SCAF000525, SCAF000745, SCAF000794
## - in 'y': 10, 11, 13, 14, 17, 19, 21, 24, 25, 28, 30, 32, 34, 01, 02, 04, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000147, SCAF000740, SCAF000742, SCAF000807
## - in 'y': 11, 12, 13, 14, 15, 18, 21, 22, 23, 24, 29, 30, 31, 20.2, 01, 02, 04, 05, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000640
## - in 'y': 10, 11, 12, 13, 15, 17, 18, 19, 21, 22, 23, 24, 29, 32, 01, 02, 04, 05, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000154, SCAF000254, SCAF000365, SCAF000458, SCAF000674, SCAF000733
## - in 'y': 11, 14, 15, 16, 17, 18, 21, 22, 23, 25, 27, 29, 30, 31, 01, 02, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000196, SCAF000254
## - in 'y': 10, 12, 13, 14, 16, 19, 21, 23, 26, 28, 29, 33, 20.2, 01, 02, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000270
## - in 'y': 10, 11, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 27, 28, 29, 32, 33, 20.2, 01, 02, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000473, SCAF000584
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 30, 33, 34, 35, 20.2, 01, 02, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000258
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 05, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000455, SCAF000676
## - in 'y': 10, 12, 14, 16, 17, 22, 23, 24, 25, 26, 20.2, 01, 02, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000252
## - in 'y': 11, 12, 13, 15, 16, 18, 21, 22, 23, 24, 26, 31, 32, 35, 20.2, 01, 02, 04, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000147, SCAF000275
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 24, 25, 26, 29, 30, 01, 02, 05, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000154
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 22, 23, 24, 25, 26, 27, 29, 30, 31, 32, 33, 35, 20.2, 01, 02, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000318
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 27, 29, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000348
## - in 'y': 10, 12, 13, 14, 16, 25, 26, 28, 29, 35, 01, 02, 04, 05, 06, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000262, SCAF000348, SCAF000411, SCAF000765, SCAF000794
## - in 'y': 18, 19, 33, 01, 02, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000619, SCAF000627, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000066
## - in 'y': 18, 21, 01, 02, 05, 08, SCAF000001, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000090, SCAF000118, SCAF000398, SCAF000752, SCAF000756
## - in 'y': 21, 01, 02, 03, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000036, SCAF000759
## - in 'y': 21, 33, 20.2, 01, 02, 03, 05, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000118, SCAF000662
## - in 'y': 10, 11, 12, 13, 14, 15, 17, 18, 19, 21, 22, 23, 24, 25, 27, 28, 31, 32, 33, 35, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000584
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000118, SCAF000658
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 35, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000386, SCAF000648
## - in 'y': 10, 11, 16, 17, 18, 19, 21, 26, 27, 29, 30, 32, 20.2, 01, 02, 03, 05, 06, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000014, SCAF000088, SCAF000293, SCAF000498, SCAF000718, SCAF000733, SCAF000794
## - in 'y': 11, 12, 14, 18, 19, 24, 25, 26, 27, 32, 33, 01, 02, 03, 06, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000088, SCAF000662
## - in 'y': 11, 14, 15, 17, 18, 19, 21, 22, 24, 26, 27, 28, 29, 30, 32, 34, 35, 20.2, 01, 02, 03, 05, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000088
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000612
## - in 'y': 10, 11, 12, 13, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000504
## - in 'y': 10, 12, 13, 14, 15, 16, 22, 25, 26, 29, 30, 20.2, 01, 02, 03, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000344
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 18, 19, 21, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 20.1, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000383, SCAF000387, SCAF000701, SCAF000787
## - in 'y': 10, 11, 13, 14, 15, 16, 18, 21, 26, 20.2, 01, 02, 03, 05, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000196, SCAF000759
## - in 'y': 10, 11, 12, 13, 15, 16, 17, 18, 19, 21, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000037, SCAF000525
## - in 'y': 10, 12, 13, 16, 17, 19, 23, 24, 28, 35, 01, 02, 03, 04, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000029, SCAF000387
## - in 'y': 16, 19, 30, 32, 01, 02, 03, 04, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000348
## - in 'y': 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 24, 25, 26, 27, 29, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000029, SCAF000152, SCAF000342, SCAF000807
## - in 'y': 12, 13, 14, 16, 17, 18, 19, 21, 24, 25, 27, 28, 29, 30, 33, 34, 20.2, 01, 02, 03, 04, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000565
## - in 'y': 10, 11, 12, 16, 17, 18, 19, 22, 23, 24, 26, 28, 31, 32, 20.2, 01, 02, 03, 04, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000029
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000551
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000766, SCAF000787
## - in 'y': 10, 11, 13, 15, 16, 18, 19, 21, 22, 23, 24, 25, 27, 28, 29, 31, 32, 33, 20.2, 01, 02, 03, 04, 05, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000177
## - in 'y': 10, 12, 13, 14, 15, 16, 17, 18, 19, 21, 23, 24, 25, 26, 27, 29, 30, 31, 32, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000445
## - in 'y': 10, 11, 12, 13, 15, 16, 22, 23, 26, 27, 28, 31, 33, 34, 20.2, 01, 02, 03, 04, 05, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000050
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000687
## - in 'y': 10, 11, 12, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000147, SCAF000740
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000118, SCAF000282, SCAF000662
## - in 'y': 10, 13, 14, 15, 16, 18, 19, 21, 22, 24, 27, 28, 29, 32, 33, 20.2, 01, 02, 03, 04, 05, 06, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000060, SCAF000450, SCAF000795
## - in 'y': 10, 11, 12, 14, 15, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000125
## - in 'y': 10, 11, 12, 13, 14, 15, 17, 18, 19, 21, 23, 24, 25, 26, 27, 28, 30, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000807
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 19, 21, 22, 23, 24, 25, 26, 28, 29, 30, 31, 32, 33, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000438
## - in 'y': 11, 12, 13, 14, 15, 16, 17, 18, 19, 22, 24, 25, 26, 27, 29, 30, 31, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000218, SCAF000663
## - in 'y': 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 30, 32, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000770
## - in 'y': 12, 13, 14, 15, 16, 17, 18, 19, 22, 23, 25, 26, 27, 28, 29, 31, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000521
## - in 'y': 11, 12, 13, 14, 15, 16, 17, 18, 21, 22, 23, 24, 26, 27, 29, 30, 34, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000118
## - in 'y': 10, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000210, SCAF000284
## - in 'y': 10, 13, 14, 16, 17, 18, 19, 21, 23, 24, 25, 26, 27, 28, 30, 31, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000090
## - in 'y': 10, 11, 12, 14, 15, 16, 18, 19, 21, 22, 23, 24, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000262
## - in 'y': 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 24, 26, 27, 28, 29, 30, 31, 32, 33, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000733
## - in 'y': 10, 11, 12, 13, 14, 15, 18, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000678
## - in 'y': 10, 11, 12, 13, 14, 15, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 31, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000387
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 19, 21, 22, 23, 24, 25, 27, 28, 30, 31, 32, 33, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000795
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 21, 22, 23, 24, 25, 26, 27, 28, 29, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000306
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000740
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000678
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 22, 23, 24, 25, 26, 27, 28, 29, 31, 33, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000147
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000376
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000329
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000745
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000474
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 30, 31, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000693
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 32, 33, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000056
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000595
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000444
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000112
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000244
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 27, 28, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000411, SCAF000425
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000474
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000450
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000810
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 32, 33, 34, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000794
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000745
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): The 2 combined objects have no sequence levels in common. (Use
## suppressWarnings() to suppress this warning.)
## Warning in .Seqinfo.mergexy(x, y): The 2 combined objects have no sequence levels in common. (Use
## suppressWarnings() to suppress this warning.)## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000383
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): The 2 combined objects have no sequence levels in common. (Use
## suppressWarnings() to suppress this warning.)
## Warning in .Seqinfo.mergexy(x, y): The 2 combined objects have no sequence levels in common. (Use
## suppressWarnings() to suppress this warning.)## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000473
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 20.1, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): The 2 combined objects have no sequence levels in common. (Use
## suppressWarnings() to suppress this warning.)snp_cond_sets <- get_snp_sets(snp_strain_expt, factor="state")## The factor chronic has 14 rows.## The factor failure has 3 rows.## The factor responder has 3 rows.## The factor self_heal has 13 rows.##
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|=================================================================| 100%snp_cond_summary <- snps_vs_genes(parasite_expt, snp_cond_sets)
snp_cond_genes <- snps_vs_intersections(parasite_expt, snp_cond_sets)## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000002, SCAF000005, SCAF000019, SCAF000026, SCAF000043, SCAF000047, SCAF000049, SCAF000067, SCAF000073, SCAF000085, SCAF000090, SCAF000092, SCAF000101, SCAF000111, SCAF000139, SCAF000144, SCAF000147, SCAF000148, SCAF000152, SCAF000154, SCAF000163, SCAF000164, SCAF000185, SCAF000195, SCAF000198, SCAF000212, SCAF000219, SCAF000223, SCAF000236, SCAF000240, SCAF000241, SCAF000242, SCAF000255, SCAF000262, SCAF000275, SCAF000277, SCAF000290, SCAF000294, SCAF000312, SCAF000325, SCAF000327, SCAF000343, SCAF000348, SCAF000349, SCAF000351, SCAF000362, SCAF000375, SCAF000382, SCAF000385, SCAF000387, SCAF000393, SCAF000395, SCAF000399, SCAF000412, SCAF000418, SCAF000431, SCAF000445, SCAF000457, SCAF000466, SCAF000467, SCAF000476, SCAF000482, SCAF000504, SCAF000513, SCAF000514, SCAF000525, SCAF000557, SCAF000565, SCAF000589, SCAF000595, SCAF000596, SCAF000606, SCAF000608, SCAF000609, SCAF000613, SCAF000621, SCAF000633, SCAF000635, SCAF000640, SCAF000647, SCAF000665, SCAF000669, SCAF000677, SCAF000693, SCAF000694, SCAF000701, SCAF000702, SCAF000710, SCAF000715, SCAF000718, SCAF000721, SCAF000728, SCAF000740, SCAF000743, SCAF000745, SCAF000747, SCAF000749, SCAF000754, SCAF000755, SCAF000757, SCAF000758, SCAF000759, SCAF000764, SCAF000765, SCAF000767, SCAF000768, SCAF000770, SCAF000778, SCAF000784, SCAF000794, SCAF000795, SCAF000809, SCAF000810
## - in 'y': SCAF000025, SCAF000028, SCAF000038, SCAF000039, SCAF000048, SCAF000068, SCAF000074, SCAF000076, SCAF000080, SCAF000084, SCAF000096, SCAF000121, SCAF000128, SCAF000132, SCAF000136, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000174, SCAF000188, SCAF000201, SCAF000230, SCAF000239, SCAF000249, SCAF000265, SCAF000286, SCAF000288, SCAF000301, SCAF000314, SCAF000321, SCAF000328, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000446, SCAF000459, SCAF000463, SCAF000495, SCAF000496, SCAF000500, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000573, SCAF000575, SCAF000582, SCAF000592, SCAF000598, SCAF000610, SCAF000619, SCAF000645, SCAF000649, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000717, SCAF000720, SCAF000724, SCAF000734, SCAF000737, SCAF000772, SCAF000782, SCAF000789, SCAF000791, SCAF000799, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000058, SCAF000090, SCAF000118, SCAF000241, SCAF000254, SCAF000270, SCAF000282, SCAF000297, SCAF000306, SCAF000383, SCAF000386, SCAF000429, SCAF000444, SCAF000612, SCAF000633, SCAF000658, SCAF000667, SCAF000678, SCAF000729, SCAF000745, SCAF000764, SCAF000770, SCAF000794
## - in 'y': SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000071, SCAF000074, SCAF000076, SCAF000078, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000197, SCAF000200, SCAF000202, SCAF000203, SCAF000206, SCAF000227, SCAF000229, SCAF000230, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000403, SCAF000417, SCAF000420, SCAF000424, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000495, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000780, SCAF000781, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000009, SCAF000088, SCAF000101, SCAF000147, SCAF000154, SCAF000196, SCAF000262, SCAF000275, SCAF000293, SCAF000348, SCAF000411, SCAF000445, SCAF000450, SCAF000742, SCAF000759, SCAF000765, SCAF000778, SCAF000795, SCAF000811
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000358, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000014, SCAF000088, SCAF000252, SCAF000270, SCAF000361, SCAF000612, SCAF000662, SCAF000718
## - in 'y': SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000065, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000014, SCAF000054, SCAF000066, SCAF000112, SCAF000118, SCAF000151, SCAF000184, SCAF000254, SCAF000315, SCAF000318, SCAF000348, SCAF000642, SCAF000660, SCAF000675, SCAF000745, SCAF000794
## - in 'y': SCAF000001, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000048, SCAF000053, SCAF000062, SCAF000063, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000211, SCAF000229, SCAF000230, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000554, SCAF000569, SCAF000573, SCAF000575, SCAF000582, SCAF000585, SCAF000588, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000619, SCAF000627, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000118, SCAF000662
## - in 'y': 12, 17, 18, 19, 21, 24, 25, 28, 32, 20.2, 02, 03, 05, 07, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000052, SCAF000612, SCAF000694
## - in 'y': 12, 13, 18, 26, 32, 01, 05, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000015, SCAF000088, SCAF000139, SCAF000387, SCAF000770
## - in 'y': 12, 21, 30, 01, 06, 08, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000014, SCAF000029, SCAF000050, SCAF000056, SCAF000088, SCAF000111, SCAF000118, SCAF000147, SCAF000152, SCAF000196, SCAF000204, SCAF000218, SCAF000254, SCAF000258, SCAF000270, SCAF000332, SCAF000342, SCAF000344, SCAF000383, SCAF000418, SCAF000450, SCAF000473, SCAF000474, SCAF000521, SCAF000584, SCAF000595, SCAF000633, SCAF000658, SCAF000662, SCAF000678, SCAF000694, SCAF000733, SCAF000742, SCAF000745, SCAF000759, SCAF000766, SCAF000770, SCAF000787
## - in 'y': 01, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000097, SCAF000110, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000400, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000503, SCAF000511, SCAF000512, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000645, SCAF000649, SCAF000650, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000779, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000066, SCAF000444, SCAF000474, SCAF000678, SCAF000687
## - in 'y': 12, 01, 05, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000044, SCAF000048, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000019, SCAF000029, SCAF000379, SCAF000383, SCAF000408, SCAF000612, SCAF000658
## - in 'y': 10, 12, 13, 14, 16, 18, 19, 22, 30, 33, 35, 20.2, 01, 02, 03, 05, 06, 07, 09, SCAF000001, SCAF000003, SCAF000011, SCAF000017, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000282, SCAF000693
## - in 'y': 10, 11, 12, 13, 14, 15, 16, 18, 19, 21, 24, 25, 26, 27, 28, 29, 30, 31, 32, 34, 35, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000027, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).## Warning in .Seqinfo.mergexy(x, y): Each of the 2 combined objects has sequence levels not in the other:
## - in 'x': SCAF000254
## - in 'y': 10, 11, 12, 13, 15, 16, 17, 18, 19, 21, 23, 25, 26, 27, 28, 29, 33, 34, 20.2, 01, 02, 03, 04, 05, 06, 07, 08, 09, SCAF000001, SCAF000003, SCAF000010, SCAF000011, SCAF000017, SCAF000021, SCAF000025, SCAF000028, SCAF000033, SCAF000038, SCAF000039, SCAF000041, SCAF000044, SCAF000048, SCAF000051, SCAF000053, SCAF000062, SCAF000063, SCAF000064, SCAF000065, SCAF000068, SCAF000071, SCAF000074, SCAF000075, SCAF000076, SCAF000078, SCAF000080, SCAF000084, SCAF000089, SCAF000096, SCAF000097, SCAF000110, SCAF000114, SCAF000115, SCAF000117, SCAF000119, SCAF000121, SCAF000122, SCAF000124, SCAF000128, SCAF000132, SCAF000136, SCAF000137, SCAF000142, SCAF000146, SCAF000153, SCAF000165, SCAF000166, SCAF000171, SCAF000172, SCAF000174, SCAF000176, SCAF000188, SCAF000191, SCAF000194, SCAF000197, SCAF000200, SCAF000201, SCAF000202, SCAF000203, SCAF000206, SCAF000209, SCAF000211, SCAF000227, SCAF000229, SCAF000230, SCAF000233, SCAF000235, SCAF000237, SCAF000239, SCAF000245, SCAF000248, SCAF000249, SCAF000250, SCAF000253, SCAF000261, SCAF000264, SCAF000265, SCAF000266, SCAF000267, SCAF000271, SCAF000286, SCAF000287, SCAF000288, SCAF000292, SCAF000295, SCAF000301, SCAF000302, SCAF000303, SCAF000310, SCAF000314, SCAF000316, SCAF000319, SCAF000321, SCAF000328, SCAF000347, SCAF000358, SCAF000364, SCAF000368, SCAF000388, SCAF000397, SCAF000400, SCAF000403, SCAF000417, SCAF000420, SCAF000421, SCAF000424, SCAF000426, SCAF000434, SCAF000446, SCAF000447, SCAF000459, SCAF000461, SCAF000463, SCAF000465, SCAF000470, SCAF000477, SCAF000483, SCAF000492, SCAF000495, SCAF000496, SCAF000500, SCAF000503, SCAF000511, SCAF000512, SCAF000515, SCAF000522, SCAF000532, SCAF000539, SCAF000541, SCAF000543, SCAF000544, SCAF000554, SCAF000555, SCAF000569, SCAF000573, SCAF000575, SCAF000576, SCAF000577, SCAF000582, SCAF000585, SCAF000588, SCAF000590, SCAF000591, SCAF000592, SCAF000593, SCAF000598, SCAF000599, SCAF000600, SCAF000601, SCAF000603, SCAF000605, SCAF000610, SCAF000611, SCAF000618, SCAF000619, SCAF000627, SCAF000637, SCAF000643, SCAF000644, SCAF000645, SCAF000649, SCAF000650, SCAF000652, SCAF000653, SCAF000654, SCAF000656, SCAF000666, SCAF000673, SCAF000680, SCAF000682, SCAF000697, SCAF000700, SCAF000707, SCAF000713, SCAF000717, SCAF000720, SCAF000722, SCAF000723, SCAF000724, SCAF000727, SCAF000734, SCAF000735, SCAF000737, SCAF000738, SCAF000760, SCAF000761, SCAF000762, SCAF000772, SCAF000779, SCAF000780, SCAF000781, SCAF000782, SCAF000783, SCAF000789, SCAF000791, SCAF000797, SCAF000798, SCAF000799, SCAF000804, SCAF000805, SCAF000806, SCAF000812, SCAF000813, SCAF000815, SCAF000816, SCAF000818
## Make sure to always combine/compare objects based on the same reference
## genome (use suppressWarnings() to suppress this warning).snp_strain_norm <- normalize_expt(snp_strain_expt, transform="log2", convert="cpm", filter=TRUE)## This function will replace the expt$expressionset slot with:## log2(cpm(hpgl(data)))## It backs up the current data into a slot named:
## expt$backup_expressionset. It will also save copies of each step along the way
## in expt$normalized with the corresponding libsizes. Keep the libsizes in mind
## when invoking limma. The appropriate libsize is the non-log(cpm(normalized)).
## This is most likely kept at:
## 'new_expt$normalized$intermediate_counts$normalization$libsizes'
## A copy of this may also be found at:
## new_expt$best_libsize## Leaving the data unnormalized. This is necessary for DESeq, but
## EdgeR/limma might benefit from normalization. Good choices include quantile,
## size-factor, tmm, etc.## Not correcting the count-data for batch effects. If batch is
## included in EdgerR/limma's model, then this is probably wise; but in extreme
## batch effects this is a good parameter to play with.## Step 1: performing count filter with option: hpgl## Removing 228809 low-count genes (210906 remaining).## Step 2: not normalizing the data.## Step 3: converting the data with cpm.## Step 4: transforming the data with log2.## transform_counts: Found 5653071 values equal to 0, adding 1 to the matrix.## Step 5: not doing batch correction.snp_strain_norm <- set_expt_conditions(snp_strain_norm, fact="pathogenstrain")
test <- plot_disheat(snp_strain_norm)
des <- snp_strain_norm$design
library(Heatplus)
##hmcols <- colorRampPalette(c("yellow","black","darkblue"))(256)
correlations <- hpgl_cor(exprs(snp_strain_norm))
mydendro <- list(
"clustfun" = hclust,
"lwd" = 2.0)
col_data <- as.data.frame(des[, c("pathogenstrain")])
row_data <- as.data.frame(des[, c("condition")])
colnames(col_data) <- c("strain")
colnames(row_data) <- c("condition")
myannot <- list(
"Col" = list("data" = col_data),
"Row" = list("data" = row_data))
myclust <- list("cuth" = 1.0,
"col" = BrewerClusterCol)
mylabs <- list(
"Row" = list("nrow" = 4),
"Col" = list("nrow" = 4))
hmcols <- colorRampPalette(c("darkblue", "beige"))(333)
map2 <- annHeatmap2(
correlations,
dendrogram=mydendro,
annotation=myannot,
cluster=myclust,
labels=mylabs,
col=hmcols)
num_clusters <- max(map2[["cluster"]][["Row"]][["grp"]])
chosen_palette <- "Dark2"
new_colors <- grDevices::colorRampPalette(
RColorBrewer::brewer.pal(num_clusters, chosen_palette))(num_clusters)## Warning in RColorBrewer::brewer.pal(num_clusters, chosen_palette): n too large, allowed maximum for palette Dark2 is 8
## Returning the palette you asked for with that many colorsmyclust <- list("cuth" = 1.0,
"col" = new_colors)
map2 <- annHeatmap2(
correlations,
dendrogram=mydendro,
annotation=myannot,
cluster=myclust,
labels=mylabs,
scale="none",
col=hmcols)## Warning in breakColors(breaks, col): more colors than classes: ignoring 25
## last colorsplot(map2)
pander::pander(sessionInfo())R version 3.4.3 (2017-11-30)
**Platform:** x86_64-pc-linux-gnu (64-bit)
locale: LC_CTYPE=en_US.UTF-8, LC_NUMERIC=C, LC_TIME=en_US.UTF-8, LC_COLLATE=en_US.UTF-8, LC_MONETARY=en_US.UTF-8, LC_MESSAGES=en_US.UTF-8, LC_PAPER=en_US.UTF-8, LC_NAME=C, LC_ADDRESS=C, LC_TELEPHONE=C, LC_MEASUREMENT=en_US.UTF-8 and LC_IDENTIFICATION=C
attached base packages: stats, graphics, grDevices, utils, datasets, methods and base
other attached packages: hpgltools(v.2017.10), Heatplus(v.2.24.0) and foreach(v.1.4.4)
loaded via a namespace (and not attached): Biobase(v.2.38.0), httr(v.1.3.1), edgeR(v.3.20.8), RMySQL(v.0.10.13.9000), bit64(v.0.9-7), gtools(v.3.5.0), assertthat(v.0.2.0), stats4(v.3.4.3), pander(v.0.6.1), RBGL(v.1.54.0), blob(v.1.1.0), GenomeInfoDbData(v.1.0.0), Rsamtools(v.1.30.0), yaml(v.2.1.16), progress(v.1.1.2), pillar(v.1.1.0), RSQLite(v.2.0), backports(v.1.1.2), lattice(v.0.20-35), limma(v.3.34.8), doSNOW(v.1.0.16), digest(v.0.6.15), GenomicRanges(v.1.30.1), RColorBrewer(v.1.1-2), XVector(v.0.18.0), colorspace(v.1.3-2), htmltools(v.0.3.6), Matrix(v.1.2-12), plyr(v.1.8.4), OrganismDbi(v.1.20.0), XML(v.3.98-1.9), devtools(v.1.13.4), biomaRt(v.2.34.2), zlibbioc(v.1.24.0), scales(v.0.5.0), snow(v.0.4-2), BiocParallel(v.1.12.0), tibble(v.1.4.2), IRanges(v.2.12.0), ggplot2(v.2.2.1), withr(v.2.1.1), SummarizedExperiment(v.1.8.1), GenomicFeatures(v.1.30.3), BiocGenerics(v.0.24.0), lazyeval(v.0.2.1), magrittr(v.1.5), memoise(v.1.1.0), evaluate(v.0.10.1), doParallel(v.1.0.11), xml2(v.1.2.0), graph(v.1.56.0), BiocInstaller(v.1.28.0), tools(v.3.4.3), data.table(v.1.10.4-3), prettyunits(v.1.0.2), matrixStats(v.0.53.0), stringr(v.1.2.0), S4Vectors(v.0.16.0), munsell(v.0.4.3), locfit(v.1.5-9.1), DelayedArray(v.0.4.1), AnnotationDbi(v.1.40.0), Biostrings(v.2.46.0), compiler(v.3.4.3), GenomeInfoDb(v.1.14.0), rlang(v.0.1.6), grid(v.3.4.3), RCurl(v.1.95-4.10), iterators(v.1.0.9), bitops(v.1.0-6), base64enc(v.0.1-3), rmarkdown(v.1.8), gtable(v.0.2.0), codetools(v.0.2-15), DBI(v.0.7), roxygen2(v.6.0.1), R6(v.2.2.2), GenomicAlignments(v.1.14.1), knitr(v.1.19), rtracklayer(v.1.38.3), bit(v.1.1-12), commonmark(v.1.4), rprojroot(v.1.3-2), stringi(v.1.1.6), parallel(v.3.4.3) and Rcpp(v.0.12.15)
message(paste0("This is hpgltools commit: ", get_git_commit()))## If you wish to reproduce this exact build of hpgltools, invoke the following:## > git clone http://github.com/abelew/hpgltools.git## > git reset abb95c558c85a0ca66ab8bbbfb1aa858a05aefb9## R> packrat::restore()## This is hpgltools commit: Tue Feb 20 17:48:37 2018 -0500: abb95c558c85a0ca66ab8bbbfb1aa858a05aefb9this_save <- paste0(gsub(pattern="\\.Rmd", replace="", x=rmd_file), "-v", ver, ".rda.xz")
message(paste0("Saving to ", this_save))## Saving to 01_annotation-v20171110.rda.xztmp <- sm(saveme(filename=this_save))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