|
GPI Lipid Anchor Project | |
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Query sequence LmjF.04.1160 (length 60 amino acids):
MDVRRTPTPT TLTQYIIKSQ PPHSRGDFTL LMMAIQTSVK VIEKNIRRAG MKGMLGYIAG
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -63.25 (PValue = 5.001476e-01)
Components of the Score Function:
Profile Score...............................................: -11.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.04
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Query sequence LmjF.08.1265 (length 60 amino acids):
MPLPLTSLAR ASASPCAVAG STTTGTAVAA GSSSGADCYV IVWVEGRERP VYACTAPLPS
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -64.19 (PValue = 5.190821e-01)
Components of the Score Function:
Profile Score...............................................: -16.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.13
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.09
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Query sequence LmjF.04.1080 (length 60 amino acids):
MSSRQMRRLQ DLVDRATGLD ADDFDDDDAV PRTMQVRKSV HHRQQKKSKK KTGAAASPPP
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -86.00 (PValue = 8.668659e-01)
Components of the Score Function:
Profile Score...............................................: -20.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.36
Term 4 Volume Compensation (-1, 1, 2).....................: -5.92
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.20
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Query sequence LmjF.04.1210 (length 60 amino acids):
MPEISSEVAP AIKSIFQGRF FLTKLLGKGG FGEVYAAIQT SSNEMVAVKM EKNNGRNSFL
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -54.54 (PValue = 3.301785e-01)
Components of the Score Function:
Profile Score...............................................: -5.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.35
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.93
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Query sequence LmjF.04.1165 (length 60 amino acids):
MWGGGRLMLQ RTTAVSKGGA DPDERIPAFI PVTRDTAPMR LSVLSATSWG THTHTQAHAH
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -64.52 (PValue = 5.258958e-01)
Components of the Score Function:
Profile Score...............................................: -10.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.85
Term 14 Hydrophobicity of Tail [26..end]...................: -3.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.80
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Query sequence LmjF.04.1040 (length 60 amino acids):
MCITHQHQAV DGAARAVDRR HSTPSPHLPL PLPLPLPAQT TQHIFSHVIE SDAAAEVQSD
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -70.52 (PValue = 6.436816e-01)
Components of the Score Function:
Profile Score...............................................: -17.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.70
Term 4 Volume Compensation (-1, 1, 2).....................: -1.06
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.19
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.18
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Query sequence LmjF.04.0850 (length 60 amino acids):
MQQPCFFAAR CGAQRISRLA TAAAATVSSS PAIMRCAMSS SSSSSTSSNG LLTVHASATA
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -14.80 (PValue = 1.242994e-02)
Components of the Score Function:
Profile Score...............................................: 11.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.83
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Query sequence LmjF.04.0840 (length 60 amino acids):
MSAPPSQPHS MWVRRGHSTH DAAAALFEEM SHAARTGGGA GALPTSLLTA APRSHVQHLR
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -44.23 (PValue = 1.734744e-01)
Components of the Score Function:
Profile Score...............................................: -4.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.36
Term 4 Volume Compensation (-1, 1, 2).....................: -1.82
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.20
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Query sequence LmjF.10.1228 (length 60 amino acids):
MESSLTAGGE MRMNSCRLCA SPSVTLFHTD KMREYYRCHQ CSLVFVPDRF MLSSAEEKAV
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.97 (PValue = 6.333771e-01)
Components of the Score Function:
Profile Score...............................................: -8.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.65
Term 4 Volume Compensation (-1, 1, 2).....................: -1.52
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.24
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Query sequence LmjF.04.0260 (length 60 amino acids):
MALLSPASSA SAPPSSRDKA SYCLQQAQAA KAAGNAALQA GNPRGASFEY KKVYLYLAEY
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -33.38 (PValue = 7.539187e-02)
Components of the Score Function:
Profile Score...............................................: -13.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.26
Term 4 Volume Compensation (-1, 1, 2).....................: -0.75
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.34
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Query sequence LmjF.04.0210 (length 60 amino acids):
MPAFAFRSNP HKRGAAAVLL LLAIAVVATL TVSAQTIDDY PPVACDGTVP NCLECRKVGM
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -66.27 (PValue = 5.610125e-01)
Components of the Score Function:
Profile Score...............................................: -11.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.17
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Query sequence LmjF.04.0035 (length 60 amino acids):
MGPRAAGFLI GGFVTAMASA VLLQYDVLRK QELTTRKTEE VVVQADMIVH RFHVIEAGLR
The site with the best score is shown in black.
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Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.35 (PValue = 3.636228e-01)
Components of the Score Function:
Profile Score...............................................: -17.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.98
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0460 (length 60 amino acids):
MSLPSAQEAA APSVTTTAHK APAEISQDNP LYSLSPLDGR YKRDTAALRA YFSEYALFKY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -61.33 (PValue = 4.612559e-01)
Components of the Score Function:
Profile Score...............................................: -8.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.23
Term 9 Volume Limitation [3..8]...........................: -1.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0400 (length 60 amino acids):
MEYDDGEYGR ESSVEALAQS QESEQVASAA SGLPESSSSA GSAKPSFRIL STRQLAQWAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -36.36 (PValue = 9.616504e-02)
Components of the Score Function:
Profile Score...............................................: 5.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0390 (length 60 amino acids):
MTVLLALAIC LAASTACAEM LLAPSDSKIP FTTFGQLQQV CAATQAGSTP VAMYTATMTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -44.96 (PValue = 1.825138e-01)
Components of the Score Function:
Profile Score...............................................: -1.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0320 (length 60 amino acids):
MTHANPPANR PPRRPLPFSP TPAQTHPSER IHLTRRHDRS LIAFVARIKD REGDNAHVIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -67.93 (PValue = 5.940607e-01)
Components of the Score Function:
Profile Score...............................................: -28.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -23.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0290 (length 60 amino acids):
MRSSRHLCGL PTVRTVAATG WRYHRHGAPE KVLQYERYRV PFDRTSGQVV VKMLAAPVHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -61.82 (PValue = 4.711051e-01)
Components of the Score Function:
Profile Score...............................................: -5.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.53
Term 9 Volume Limitation [3..8]...........................: -1.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0200 (length 60 amino acids):
MSVKHLLMAA MLVAVACSVA MASDASSWSS SSAPAHGSVS LVTMPTAPSS KSSISSSSAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -53.35 (PValue = 3.090249e-01)
Components of the Score Function:
Profile Score...............................................: 1.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0130 (length 60 amino acids):
MGPFAPRCCA LALLCSVLVL AAVLVRAESF TVTRDVTMSS TSFDDYTMVL DLSSSSADVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -41.27 (PValue = 1.402775e-01)
Components of the Score Function:
Profile Score...............................................: -0.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.15
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0127 (length 60 amino acids):
MLESDNGARP LHDGTVLISP DASPNLTRRA TNHYSAENTE APPLVDLLMR ASETIREERG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -81.21 (PValue = 8.135265e-01)
Components of the Score Function:
Profile Score...............................................: -19.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.65
Term 14 Hydrophobicity of Tail [26..end]...................: -3.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1240 (length 60 amino acids):
MGLLNTKPCS LIPAKEAFER EKKIYDKAIL SFDGVNGYDV YNCSVPFTYD GKTYIFGRVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -50.36 (PValue = 2.593003e-01)
Components of the Score Function:
Profile Score...............................................: -6.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.39
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.06
Term 14 Hydrophobicity of Tail [26..end]...................: -1.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1230 (length 60 amino acids):
MGSNASHTEP QVPRECTMVA KRKEFELTKV IQEATFLTFK GLDTHDVYNC CVPFKISGTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -64.27 (PValue = 5.207364e-01)
Components of the Score Function:
Profile Score...............................................: -16.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1170 (length 60 amino acids):
MEEDLAYKII VIGSVSVGKS NITSRFCDGA FYPDLVPTLG MDFKYSSCNT LEKRPRCVRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -61.16 (PValue = 4.577514e-01)
Components of the Score Function:
Profile Score...............................................: -5.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.05
Term 4 Volume Compensation (-1, 1, 2).....................: -1.41
Term 5 Volume Compensation (-1, 2)........................: -2.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.50
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1160 (length 60 amino acids):
MANPNTPGGD CDYIFKIIVI GDSGVGKSSL TVRLSEDVFY KDYASTIAID FRMHQMNYMD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -94.56 (PValue = 9.308826e-01)
Components of the Score Function:
Profile Score...............................................: -13.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.04
Term 14 Hydrophobicity of Tail [26..end]...................: -5.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -65.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1040 (length 60 amino acids):
MTQASASEVV SVGRRSTAIG KESSLAAPSL SIATTPFSLR TGAALPREIL AWLQSLQLGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -27.63 (PValue = 4.560791e-02)
Components of the Score Function:
Profile Score...............................................: 0.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.51
Term 9 Volume Limitation [3..8]...........................: -1.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0990 (length 60 amino acids):
MSRTKETARA KRTITSKKSK KAPSAVSGVK MSHRRWRPGT CAIREIRKFQ KSTSLLIQCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.47 (PValue = 3.111189e-01)
Components of the Score Function:
Profile Score...............................................: -12.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.97
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0930 (length 60 amino acids):
MASASVGEDA AQLSKQHQAT LHKPNGDWPN KAAPVVTPRP NTTAHKCSLR SQTAGCSPQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -73.73 (PValue = 7.016016e-01)
Components of the Score Function:
Profile Score...............................................: -10.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.43
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0550 (length 60 amino acids):
MPRNRLVVAC NASTAGRQAQ SLALSVSLST TLRSSTALAL TKSLVDITTR RGSRHSLLHT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -51.74 (PValue = 2.815397e-01)
Components of the Score Function:
Profile Score...............................................: -0.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.65
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0830 (length 60 amino acids):
MYRKDVHDDA TATRSSRPIV VVTINADESE QEDIDGEDTI LFGSDVVDAT RSDGDARQSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -67.74 (PValue = 5.903324e-01)
Components of the Score Function:
Profile Score...............................................: -12.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.76
Term 4 Volume Compensation (-1, 1, 2).....................: -2.33
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.89
Term 14 Hydrophobicity of Tail [26..end]...................: -3.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0760 (length 60 amino acids):
MTGTPPLWRR LQPLQPTLPL FAGSNHSARK TTTEHAAAAP RRMSYSFVVV PPPVPAATPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -41.65 (PValue = 1.442790e-01)
Components of the Score Function:
Profile Score...............................................: -8.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0680 (length 60 amino acids):
MRTSDARPAS PSAAPPQSRK YQLSQRPLQL PRPPPRRFLE HPHHNLLPCT SDVKRLMENE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -90.60 (PValue = 9.055957e-01)
Components of the Score Function:
Profile Score...............................................: -14.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0465 (length 60 amino acids):
MSVDSSSTHR RRCVAARLVR LAAAGAAVTV AVGTAAAWAH AGALQHRCVH DAMQARVRQS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -63.70 (PValue = 5.092376e-01)
Components of the Score Function:
Profile Score...............................................: -13.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.77
Term 14 Hydrophobicity of Tail [26..end]...................: -3.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0450 (length 60 amino acids):
MPSGNGCRAN QRREREMKKT QGAGVKHTSE DMKKHEQSKN AIQCKVCLQG FPRTVRRPEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -75.37 (PValue = 7.289586e-01)
Components of the Score Function:
Profile Score...............................................: -12.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.12
Term 14 Hydrophobicity of Tail [26..end]...................: -1.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0360 (length 60 amino acids):
MRPRRFVHPE AATLFSKWPW VRRVPIFGEA VEGYGPKVIV ALGATNLLCR GLADRILTGQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -8.54 (PValue = 5.817729e-03)
Components of the Score Function:
Profile Score...............................................: 0.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -2.08
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0330 (length 60 amino acids):
MGTTRASGPV VTSTCSAESG GRGITTTLCA SFEFPLRLQS TDGVAVAVAP SGDATFLQNI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -45.96 (PValue = 1.952865e-01)
Components of the Score Function:
Profile Score...............................................: -13.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0250 (length 60 amino acids):
MRQRSSFSAV SSAAMFKNTL TTQRAQKGDY GFNVFHNSNP QHGGSYARHE RRMREDEVED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -103.91 (PValue = 9.688779e-01)
Components of the Score Function:
Profile Score...............................................: -19.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.95
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.46
Term 14 Hydrophobicity of Tail [26..end]...................: -4.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0220 (length 60 amino acids):
MSYRARQSEF PNWSPQEEGV ATNRTSASVT DDDLRRDFDS EVLELGHDKS LSRKERAARK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -96.72 (PValue = 9.420111e-01)
Components of the Score Function:
Profile Score...............................................: -25.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.87
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -1.74
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.25
Term 14 Hydrophobicity of Tail [26..end]...................: -4.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0180 (length 60 amino acids):
MALVHTTYPQ CLSLVEADTA EAEVQQALED GANTLYFSHH FNYTDVPPSI AALREQLEVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -50.87 (PValue = 2.673440e-01)
Components of the Score Function:
Profile Score...............................................: -3.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.72
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.53
Term 9 Volume Limitation [3..8]...........................: -0.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0160 (length 60 amino acids):
MTTEGNSASM SGPPPLYDFE AEAHQLTREQ LEERVLQMRA ANVVLQTSVL RLREFLATLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -44.06 (PValue = 1.714618e-01)
Components of the Score Function:
Profile Score...............................................: -15.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.51
Term 4 Volume Compensation (-1, 1, 2).....................: -4.25
Term 5 Volume Compensation (-1, 2)........................: -0.97
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1150 (length 60 amino acids):
MGGKNSTQRQ GAQLRNGNGG GSTAPGRQAP SNMPPHLADQ YDNNSTRQRN QPPGNANNTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -60.52 (PValue = 4.449649e-01)
Components of the Score Function:
Profile Score...............................................: -4.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.47
Term 4 Volume Compensation (-1, 1, 2).....................: -0.14
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.40
Term 14 Hydrophobicity of Tail [26..end]...................: -3.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0120 (length 60 amino acids):
MNQMHELSHG VSAMPFSKTK RHNPYASKVL APEDSVEFNS MLNSPLSTHQ SPLNWEARAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -59.31 (PValue = 4.208871e-01)
Components of the Score Function:
Profile Score...............................................: -9.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.31
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1630 (length 60 amino acids):
MTTTMDPDAP SVLTSEVYNA AEAIFNMLQN KEKLVSFLDC TTLLRGMGMN PTHDDMDKLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -82.70 (PValue = 8.316275e-01)
Components of the Score Function:
Profile Score...............................................: -11.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -2.08
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1550 (length 60 amino acids):
MAAPDTSVPP TADTASAVNN GDDVVAFVVG DGQHKLYFSK RALMRHAPFF RAYFTEHAAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -67.46 (PValue = 5.846858e-01)
Components of the Score Function:
Profile Score...............................................: -14.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.60
Term 14 Hydrophobicity of Tail [26..end]...................: -2.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1530 (length 60 amino acids):
MAPLTTFPSP RGPAAATASS QESVSVIVRL KGAPKFSSST ALLSYTVEDG TLATPRVSCR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -48.96 (PValue = 2.375573e-01)
Components of the Score Function:
Profile Score...............................................: -1.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.32
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.74
Term 14 Hydrophobicity of Tail [26..end]...................: -2.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1460 (length 60 amino acids):
MPESEEERRL RKEKRRSAAR KAEEAEKKGA AASAEASSPS RIPSQTTATA SATTTAPSGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -46.08 (PValue = 1.968956e-01)
Components of the Score Function:
Profile Score...............................................: 0.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1430 (length 60 amino acids):
MERRRHYEVL CIADFSSAEE VRLAYKSLAL KYHPDKNLGD PTAAERFRAV CRAYEVLSNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -62.57 (PValue = 4.862587e-01)
Components of the Score Function:
Profile Score...............................................: -15.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1360 (length 60 amino acids):
MMSGKDAFII PLQDADPSLF GSPADRSSVN GGTATTQTQR GSPSRQGAAM GGGLHLQSSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.45 (PValue = 3.285295e-01)
Components of the Score Function:
Profile Score...............................................: -2.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.94
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1320 (length 60 amino acids):
MPSGVAPSFT GQPPPSLLEA PHISDKSTPP AVLSRANVTK NSPPANSNHM KQIARVRLNP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -46.95 (PValue = 2.086802e-01)
Components of the Score Function:
Profile Score...............................................: -13.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.93
Term 5 Volume Compensation (-1, 2)........................: -1.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1280 (length 60 amino acids):
MSPQTASAPK APAPPLPLWQ TLGVSGFAGM FGWCFTHPFE MWKNTVMMAA PGTSQLDSLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -69.54 (PValue = 6.252185e-01)
Components of the Score Function:
Profile Score...............................................: -10.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1250 (length 60 amino acids):
MSVTGPSSAA ATPARGGRTS AADRPHREPQ HGLGAGSTIT ISRGDDSGSG DRLLTGAKHD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -60.73 (PValue = 4.492150e-01)
Components of the Score Function:
Profile Score...............................................: 4.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.46
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1240 (length 60 amino acids):
MPLEHINLAR DRLNSAAAAS SGRGGGSGEA AARQGGEKFA ATPEEMRVIQ EKMKDPVFAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -85.31 (PValue = 8.600401e-01)
Components of the Score Function:
Profile Score...............................................: -16.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.51
Term 4 Volume Compensation (-1, 1, 2).....................: -2.35
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0960 (length 60 amino acids):
MRHRESLFVL TDFALYPTGM AVLRCSAVTA ASRPLAFVLA PYTEPSFNLL DYLGTCTDTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -49.40 (PValue = 2.442378e-01)
Components of the Score Function:
Profile Score...............................................: -2.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0930 (length 60 amino acids):
MSRYTVTENT NRSAACQPAA AGAGATATTS PSPEVYFKKQ VLKLGMDGTS LSRLVVVTDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -31.90 (PValue = 6.648707e-02)
Components of the Score Function:
Profile Score...............................................: -11.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0860 (length 60 amino acids):
MLFGRDLCSL PTPHRPTHTQ KKNTKTRTIH VSPALSHTRA TMPQVSQPLP MAGDYLVTTF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -54.38 (PValue = 3.273316e-01)
Components of the Score Function:
Profile Score...............................................: -8.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.78
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0840 (length 60 amino acids):
MSHPAFSSGQ PPGMIGSAGG TGSALLPNIT AELRGEFYPL LSTLASCESG ISATYVMELF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -50.78 (PValue = 2.659897e-01)
Components of the Score Function:
Profile Score...............................................: -13.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -2.12
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.96
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0820 (length 60 amino acids):
MELAQVVHAL QRAATVPLAV EVLLQYNNPL SEKEATQLRK FRHLQREQLE GGLKVEEPSE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -92.17 (PValue = 9.164225e-01)
Components of the Score Function:
Profile Score...............................................: -17.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0800 (length 60 amino acids):
MLLRRATRLA RVYGGGATTA FVPGSSSSSS SSSSTASVGA DYLRGRSIGA KALLGRRARQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -38.05 (PValue = 1.098984e-01)
Components of the Score Function:
Profile Score...............................................: 2.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0700 (length 60 amino acids):
MPTELLDDST QDAEEEFIFN EYAIDDSLDP LNRLLMYYQS DFSLQRLVLV RELASTAQFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -49.03 (PValue = 2.386192e-01)
Components of the Score Function:
Profile Score...............................................: -10.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.63
Term 4 Volume Compensation (-1, 1, 2).....................: -7.27
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0560 (length 60 amino acids):
MFLKHPVISS LKIYFSSVHC KAYIGRIIFL GEMTESFIIL ALPYLQQSQD SLQSAQYEAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -61.07 (PValue = 4.559429e-01)
Components of the Score Function:
Profile Score...............................................: -14.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.27
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4930 (length 60 amino acids):
MRFFFFAVAG WGGGGNPVRC TLPPVRDAVV HFLSTFLCLS SLHFDVLRSF INRRPTLPKP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -83.18 (PValue = 8.371721e-01)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4910 (length 60 amino acids):
MPLPPVESGP AAMTRRNFLV EMNRLRVSQY MPTRKQLEEE DLRIATIRQE EKRAKHAEWA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -93.70 (PValue = 9.259201e-01)
Components of the Score Function:
Profile Score...............................................: -23.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.31
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.23
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0470 (length 60 amino acids):
MSRTTSTDFV TEAGGHPFSS PGVSPMATMQ NAEDMDLDTL RRSVQVQKQL DVPPPPTAQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.73 (PValue = 6.095832e-01)
Components of the Score Function:
Profile Score...............................................: -7.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.64
Term 4 Volume Compensation (-1, 1, 2).....................: -4.72
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.67
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.26
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0450 (length 60 amino acids):
MASFLSTTAL LVALLVAMVP WACVPTVYAS TPHHGYASCD SSVVQSSGYI SIPGVNKTLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -36.66 (PValue = 9.847195e-02)
Components of the Score Function:
Profile Score...............................................: -8.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0240 (length 60 amino acids):
MVPARHIIHY FADRHTAAVA TAFFIYVLII GWCGNTGTRE VQQRTEAVFR RLHSTADASS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -59.79 (PValue = 4.303420e-01)
Components of the Score Function:
Profile Score...............................................: -14.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0180 (length 60 amino acids):
MTKSSQHQHK SSSFTPSSTN LFVRYLPREV DDNRLREIFS AFGKITSSMV MRDIYNGQSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -56.35 (PValue = 3.635477e-01)
Components of the Score Function:
Profile Score...............................................: 5.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5750 (length 60 amino acids):
MNLDQLSQFL ATVVRRHTAR EESIGAKRRL VPLYRGDTDD DGARPLPVAS LKTLYTDFEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -40.75 (PValue = 1.349742e-01)
Components of the Score Function:
Profile Score...............................................: -12.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.18
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.07
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5730 (length 60 amino acids):
MHSVSLAGLC AELSRIQVDL LQRRGAPLLL AHEGIQLLRE QLPAIELPSC VHTQISMLVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -50.19 (PValue = 2.565213e-01)
Components of the Score Function:
Profile Score...............................................: -15.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.83
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5490 (length 60 amino acids):
MQEETPLTSL KEAVPAGRIV ARLSATLQQT EQACAELSRL ESLLSSLSSG AADLVRASTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -56.36 (PValue = 3.638126e-01)
Components of the Score Function:
Profile Score...............................................: -1.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.54
Term 4 Volume Compensation (-1, 1, 2).....................: -2.04
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.53
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5430 (length 60 amino acids):
MWHTARLCCA VAAETVEKCL RDIHQGRIAA ALPRLNELKA ASCTVQGIDY ARALCFLFDK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -54.52 (PValue = 3.297779e-01)
Components of the Score Function:
Profile Score...............................................: -12.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: -0.99
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5190 (length 60 amino acids):
MDDVKRGDDL STPRALVSST TELHPGGVAS RDDDDMSELV PLLQRSRSQR FPPPSFALAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -50.18 (PValue = 2.563409e-01)
Components of the Score Function:
Profile Score...............................................: -9.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5170 (length 60 amino acids):
MASIEIPPED RQHIDYLADL FAVIIAIEQI EKANRRDLIN PNQYDSTVRR LLEKYKNTVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -69.64 (PValue = 6.270674e-01)
Components of the Score Function:
Profile Score...............................................: -3.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.86
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.99
Term 9 Volume Limitation [3..8]...........................: -2.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.96
Term 14 Hydrophobicity of Tail [26..end]...................: -2.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5040 (length 60 amino acids):
MLRRTLRRLM PSDAIGSVHP DVLWGYQQGQ YAGPGWANFV KSLPLETLAM QGGSTMANLN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -68.29 (PValue = 6.010982e-01)
Components of the Score Function:
Profile Score...............................................: -9.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4890 (length 60 amino acids):
MVCAPHDAQC FCWPFCVSAA GSCSHCPFTS PVSRGAPKSS RTPSSRGRRH TRTRQIQTKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -69.79 (PValue = 6.300259e-01)
Components of the Score Function:
Profile Score...............................................: -13.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.61
Term 14 Hydrophobicity of Tail [26..end]...................: -3.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4820 (length 60 amino acids):
MNPTSMEELL AANAAAAHEL RGVAVLDVPA FDPDGPSRVS ISNRNDSSAM MSEAMRRRAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -72.46 (PValue = 6.792618e-01)
Components of the Score Function:
Profile Score...............................................: 2.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.37
Term 14 Hydrophobicity of Tail [26..end]...................: -4.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4790 (length 60 amino acids):
MLSESDESTY SVHEAHRDDR GAVSKQVGNE TEPETSSPLA RYYPLGTKER HAFDEHMRHL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -92.15 (PValue = 9.163150e-01)
Components of the Score Function:
Profile Score...............................................: -19.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.50
Term 4 Volume Compensation (-1, 1, 2).....................: -7.28
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.51
Term 14 Hydrophobicity of Tail [26..end]...................: -3.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4760 (length 60 amino acids):
MYVRIHETYS GPPPPLLTLP PAHLFLFASS AAMSLRGSCV RLQQTALEVS TLHRLLRHCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.96 (PValue = 6.684406e-02)
Components of the Score Function:
Profile Score...............................................: -7.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4730 (length 60 amino acids):
MAVHISSNTV VASLWGSEDV TAIPLQSSGQ FLSLRLSPTT AIADNTVTSV AFHPVDETCF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -62.39 (PValue = 4.825998e-01)
Components of the Score Function:
Profile Score...............................................: -6.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.60
Term 9 Volume Limitation [3..8]...........................: -1.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.30
Term 14 Hydrophobicity of Tail [26..end]...................: -3.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4720 (length 60 amino acids):
MSDETVCIEA GERLYVLYGS ETGNAESIAK RLHHDATTTH GFPDAECMTL NQAVAMKLFD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -55.88 (PValue = 3.547593e-01)
Components of the Score Function:
Profile Score...............................................: -8.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.78
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4700 (length 60 amino acids):
MNPATKDVAS AEEESPVVCT AKQYIFDLHS YAWKESDCLI RIPRPHKGMG HGGMRVCYAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.58 (PValue = 3.309873e-01)
Components of the Score Function:
Profile Score...............................................: -3.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4610 (length 60 amino acids):
MDISYQLWSL VEQARRSATT PPASITLPSR RTRTTEETQA TDSLLTTSQA LDRAADMAID
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -51.11 (PValue = 2.712678e-01)
Components of the Score Function:
Profile Score...............................................: 1.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.37
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4580 (length 60 amino acids):
MSHSEAPRQD VLAAATCNKL PQRVWVDDED VAVEQETPAF FKESHVKPAW ALSDTTRADT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -72.12 (PValue = 6.731259e-01)
Components of the Score Function:
Profile Score...............................................: -11.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.87
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4330 (length 60 amino acids):
MPSTRRSISS QPRRTGTVTA DPASRSPTRS TCRTRQEKGK PCYEVVETRE EVTTYIVTAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -67.83 (PValue = 5.919860e-01)
Components of the Score Function:
Profile Score...............................................: -27.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.58
Term 4 Volume Compensation (-1, 1, 2).....................: -3.66
Term 5 Volume Compensation (-1, 2)........................: -0.52
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.93
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4230 (length 60 amino acids):
MFALWRGHKL VHLVFFYKAH HTLFQHFSRA SCITLYSAAK NKRTRMSEDL FKEALQSLSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -55.89 (PValue = 3.549860e-01)
Components of the Score Function:
Profile Score...............................................: -10.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.32
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3190 (length 60 amino acids):
MPPAPPPALL PIEEPPIGTQ PAAHLASGTT SQNTSSNATG GAVVCDNCKT RGHLRRNCPK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -80.42 (PValue = 8.033445e-01)
Components of the Score Function:
Profile Score...............................................: -13.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.99
Term 14 Hydrophobicity of Tail [26..end]...................: -3.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3210 (length 60 amino acids):
MTETIKWKNV AIQDEVVPRP SDIKLPDDLA ELIYMAKLAE EAERFDEMLL CIRKYVRLNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -62.67 (PValue = 4.882604e-01)
Components of the Score Function:
Profile Score...............................................: -23.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.66
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4170 (length 60 amino acids):
MSSPSNFKKL QVVSLSKDFR NSTSVVEAQL PEEVPEGMVR VSVKYAGVNA SDLNFTNGSY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -66.04 (PValue = 5.564348e-01)
Components of the Score Function:
Profile Score...............................................: -16.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.97
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4100 (length 60 amino acids):
MAKRPFGFHR VRCWRTRRLL RTPLALAVLV AVSLVAVLWF SVYENTGVTE ISSDRRFFLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.42 (PValue = 4.631501e-01)
Components of the Score Function:
Profile Score...............................................: -7.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4000 (length 60 amino acids):
MPIHQYEGWS YERLRQQRNR AHFLLEDPYR YVTVLLISKP GRPEELKCID SPCYHAAGPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.25 (PValue = 4.798427e-01)
Components of the Score Function:
Profile Score...............................................: -16.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3900 (length 60 amino acids):
MLGEGLDIGF YAEDAYAAYV TDLATSLHLV PHCRNARGAT LEVVFTGPFH DLSAYEEAVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -67.47 (PValue = 5.850178e-01)
Components of the Score Function:
Profile Score...............................................: -12.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.42
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3880 (length 60 amino acids):
MMGPRSRLQP GPSAAVSPLL NTPSPFFFWC LLLSHLASLL AAFLTETKKS KTQLIFVSRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.54 (PValue = 3.301986e-01)
Components of the Score Function:
Profile Score...............................................: -17.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.19
Term 4 Volume Compensation (-1, 1, 2).....................: -3.05
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3780 (length 60 amino acids):
MDAIKTYTYK SGAVYEGTFN GNMRSGRGHW THPQGERYEG EYKDNKQNGL GIYIFSETGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -67.90 (PValue = 5.933399e-01)
Components of the Score Function:
Profile Score...............................................: -26.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.53
Term 4 Volume Compensation (-1, 1, 2).....................: -1.20
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3530 (length 60 amino acids):
MQIFVKTLTG KTIALEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EEGRTLSDYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -74.69 (PValue = 7.177227e-01)
Components of the Score Function:
Profile Score...............................................: -27.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3340 (length 60 amino acids):
MSSSREFITT GGGPAPISRR CVATLHVLFF VLATISAVSL RAPIWLIGGL VYCSKHRNAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -53.02 (PValue = 3.032954e-01)
Components of the Score Function:
Profile Score...............................................: -4.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.11
Term 5 Volume Compensation (-1, 2)........................: -1.91
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.39
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3050 (length 60 amino acids):
MMRIKQKAFV GKKICIAWEV LHDGKGWKAQ GKALQILRFY AFSSEVYLMC RIRDADDKKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -113.83 (PValue = 9.888513e-01)
Components of the Score Function:
Profile Score...............................................: -14.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.39
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.36
Term 14 Hydrophobicity of Tail [26..end]...................: -5.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -40.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -83.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3040 (length 60 amino acids):
MRVARFRLSV CQRAHTRRSC LQCLLLGLTI LLKQPPPPLL AFFLYSASVV CSHVSPSNAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -46.49 (PValue = 2.024047e-01)
Components of the Score Function:
Profile Score...............................................: -8.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.41
Term 4 Volume Compensation (-1, 1, 2).....................: -3.10
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.67
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2950 (length 60 amino acids):
MFRFGRLCTP KAASVQRRFL NIHEYQSKQI IKDNGGRVEF GIACKTIEEV EAACAKIKTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -63.68 (PValue = 5.088603e-01)
Components of the Score Function:
Profile Score...............................................: -13.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2930 (length 60 amino acids):
MYATVPILTL GPYSLALVVG LLLYWNTSLI VSRVLAAFIV SMIAMKVDLA FHLFFSCCHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -60.26 (PValue = 4.397049e-01)
Components of the Score Function:
Profile Score...............................................: -18.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.73
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.74
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2910 (length 60 amino acids):
MLSSAHRAAF ARPTATLWAS ARSFGAGPTR LLLGLEQVQD VPTSTDRKPT GMHRGPGKRQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -94.70 (PValue = 9.316380e-01)
Components of the Score Function:
Profile Score...............................................: -14.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.33
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.40
Term 14 Hydrophobicity of Tail [26..end]...................: -4.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2780 (length 60 amino acids):
MSTTPTSHGA PYHQQLQSHI EALLILFIRD FCAEGASPTR SGYRASHLQA IAQTFYVLQI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.05 (PValue = 6.182943e-02)
Components of the Score Function:
Profile Score...............................................: -4.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2350 (length 57 amino acids):
MVKVGINGFG RIGRMVFRAA QARPEIEIVG INDLLDPEYI AYSLRYNSTH GRFNGTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -78.52 (PValue = 7.772360e-01)
Components of the Score Function:
Profile Score...............................................: -17.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.32
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2460 (length 60 amino acids):
MLQGILGSVP STGIREAENV LRQSWPSLLE LKDEAQTRFC AEAESFLKAQ LTNRPVPSDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.46 (PValue = 5.648112e-01)
Components of the Score Function:
Profile Score...............................................: -11.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.17
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.85
Term 14 Hydrophobicity of Tail [26..end]...................: -3.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2340 (length 60 amino acids):
MILLAFICGA LWVIWSVASF LMYRPRQISG ATVVVTGACT EMGRRLCMQL YARGARVIAW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -52.18 (PValue = 2.890540e-01)
Components of the Score Function:
Profile Score...............................................: -8.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.09
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2170 (length 60 amino acids):
MPAPKNKLKS FGKNRREIRS ATTTYDEHGN WVGTPHQDKM RLVANKMFAN YYDTLQQLGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -65.32 (PValue = 5.419755e-01)
Components of the Score Function:
Profile Score...............................................: -18.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1940 (length 60 amino acids):
MTGQSAALQG SNSALPWYRM GFHTLAEFNT YATFVLLGMS IMMVTSAVTS APDFVTKYFI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -58.11 (PValue = 3.974027e-01)
Components of the Score Function:
Profile Score...............................................: -6.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1930 (length 60 amino acids):
MTSTSAPAVD FSCAICLDTA TEPVVTRCGH LFCWECLDHW LHSAAGAPEC PVCKGRVDER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -76.11 (PValue = 7.408464e-01)
Components of the Score Function:
Profile Score...............................................: -11.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.12
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.38
Term 14 Hydrophobicity of Tail [26..end]...................: -3.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1800 (length 60 amino acids):
MSENVAAAQR RWQAGMHEVE AYLNALDSAR ADSAKAGLYH RAQQCMQHME KIIRLLAKRI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -58.01 (PValue = 3.954209e-01)
Components of the Score Function:
Profile Score...............................................: -20.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1760 (length 60 amino acids):
MSKLFRTVGA KGFQPFDWAN AAQYASGTTP MMKEPACYIN GAWVASALSD KTVTVEDPCT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -64.90 (PValue = 5.336075e-01)
Components of the Score Function:
Profile Score...............................................: -5.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.67
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1090 (length 60 amino acids):
MVSFLRTFAV LCIIAGVLLQ GGTARAPPRA VRAFETKFNS VSQACRGVLE TECPSDGLAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -52.65 (PValue = 2.969771e-01)
Components of the Score Function:
Profile Score...............................................: -6.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1150 (length 60 amino acids):
MHLCASSFSL SFSSVLCQLH RALRNTPHTH LSPSSTAFVC LALCAASACC PVPSRASSEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -57.70 (PValue = 3.893111e-01)
Components of the Score Function:
Profile Score...............................................: -2.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.53
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1350 (length 60 amino acids):
MSRVRVMIDR NQRISLSASA FFFLTHAPLR HGELLPKQRV QRRRRSAMPK LCVEYSKSGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -70.06 (PValue = 6.351052e-01)
Components of the Score Function:
Profile Score...............................................: 1.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -5.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1330 (length 60 amino acids):
MMSARRWCAT TPPHGTGSSG SQSIDEEAVV RAAKWSSSKF EERLGFCAGE TITEERLKRH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -86.79 (PValue = 8.742719e-01)
Components of the Score Function:
Profile Score...............................................: -6.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.87
Term 14 Hydrophobicity of Tail [26..end]...................: -3.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1190 (length 60 amino acids):
MRRAKCHVFV RCAQPAAALT PVRTIIAAKG IVENRIVKHY TNRTVEESKA ERMESVKKTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -63.99 (PValue = 5.152006e-01)
Components of the Score Function:
Profile Score...............................................: -5.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -1.30
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1020 (length 60 amino acids):
MLARFVCVFA IVAAFGLLSP VSADTAHPHH SRSHTVTIES GTLPEAKAFA PLRLGAGEWV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -43.15 (PValue = 1.607328e-01)
Components of the Score Function:
Profile Score...............................................: -11.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0920 (length 60 amino acids):
MVQEWWVSAA QEAVISRKAT SRAERIVTEA DDPRSGTSHF YDSDARLCLV CNARLEGSYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -50.09 (PValue = 2.549089e-01)
Components of the Score Function:
Profile Score...............................................: -5.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.84
Term 9 Volume Limitation [3..8]...........................: -0.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0880 (length 60 amino acids):
MHRAHTYLLC IAAHLLLSPP PPSSPSRFVF ASSSLSCPGC AFSWVTRFVS SMLRRTLCCG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -36.56 (PValue = 9.772594e-02)
Components of the Score Function:
Profile Score...............................................: 5.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0840 (length 60 amino acids):
MIYKAYGSPE NNSGNTHMYS MYAPPNAYVQ GQGGSRTMYG YAGTGGHGSG HPFGYHANPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -53.41 (PValue = 3.100899e-01)
Components of the Score Function:
Profile Score...............................................: -5.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.27
Term 14 Hydrophobicity of Tail [26..end]...................: -2.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0670 (length 60 amino acids):
MADALPSALF IALAILFLFW GTVQTLSLKW ADTIEASDGF TGPTSGQGGS HAVHFRLLYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -32.34 (PValue = 6.903083e-02)
Components of the Score Function:
Profile Score...............................................: 2.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -22.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0650 (length 60 amino acids):
MPTATAAKAA ARPPVRTSVE RLLLHPFVVF LVTFSVRAAL FTSRYSVEPY ISSPVIPHPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -62.20 (PValue = 4.788775e-01)
Components of the Score Function:
Profile Score...............................................: -21.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0560 (length 60 amino acids):
MQSGAALLEP PLSMHCKYTL RILPFSLPPV VSPQLCRNSW FCTHILAAAL AFSVAISSNM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -44.38 (PValue = 1.752446e-01)
Components of the Score Function:
Profile Score...............................................: -4.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.63
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0520 (length 60 amino acids):
MENIKEEICL VANIIDRLLE ANGSLRADVL EPLIQRLRVA AGELSRIDQQ SKSDPVLSSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -50.57 (PValue = 2.626027e-01)
Components of the Score Function:
Profile Score...............................................: -6.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.42
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0340 (length 60 amino acids):
MHLRVYMVDG KRVYTLKKVD PEGKPTLSAH PARFSPDDKL SRHRVTIKRR FKVLPSERRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -76.59 (PValue = 7.483399e-01)
Components of the Score Function:
Profile Score...............................................: -14.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -5.37
Term 4 Volume Compensation (-1, 1, 2).....................: -6.91
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0280 (length 60 amino acids):
MALPFSGFVG TASLSLSLFR RCCLLLSQQL QERAHAHTHT HTQSLTFCHR TMASSATSSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -62.08 (PValue = 4.763580e-01)
Components of the Score Function:
Profile Score...............................................: -8.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.73
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0190 (length 60 amino acids):
MVNFTVDQVR ELMDYPDQIR NMSVIAHVDH GKSTLSDSLV GAAGIIKMEE AGDKRIMDTR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -72.32 (PValue = 6.767484e-01)
Components of the Score Function:
Profile Score...............................................: -6.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.91
Term 14 Hydrophobicity of Tail [26..end]...................: -4.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0170 (length 60 amino acids):
MSCSSPALAR VSFFCSWSLF IAPSPGAEIA ARLAGRGGVE IFLRAALSAF AYPNRAEAHE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -53.18 (PValue = 3.061222e-01)
Components of the Score Function:
Profile Score...............................................: -12.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.97
Term 14 Hydrophobicity of Tail [26..end]...................: -4.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.3010 (length 60 amino acids):
MPPLSRLDAV CDTATTATTN LEDLQELCRR VQLLRKGVND ICNRKIPALE SSIEQFHETH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -79.56 (PValue = 7.917420e-01)
Components of the Score Function:
Profile Score...............................................: -22.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.09
Term 4 Volume Compensation (-1, 1, 2).....................: -2.56
Term 5 Volume Compensation (-1, 2)........................: -1.63
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.96
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2700 (length 60 amino acids):
MSAMVLSIGI PPQERVRLCA VAAADVCQRA VAHMKAAAQC EAHDAAAEPY IRAVYVHRAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -54.65 (PValue = 3.321927e-01)
Components of the Score Function:
Profile Score...............................................: -6.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.12
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.3005 (length 60 amino acids):
MSSSIIIRDL ETCDLGEVLE LLSHLTSAPA LSQEELEQLH ARRVLAGVRT RVAVSSTTQK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -69.51 (PValue = 6.246250e-01)
Components of the Score Function:
Profile Score...............................................: -18.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2970 (length 60 amino acids):
MRCGTALVPS LAIRRFPSVR ARTNSLGTRW HCRRCTDLHE KSTQISRHTH TVSRAKAHIY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.30 (PValue = 5.617461e-01)
Components of the Score Function:
Profile Score...............................................: -15.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.67
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2680 (length 60 amino acids):
MQRFTARYVV SAAASASARR LPSRFGMYWA QRCPSRFAAT KFHLSAADET AAAAKPWVAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -42.40 (PValue = 1.523370e-01)
Components of the Score Function:
Profile Score...............................................: -3.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.27
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2650 (length 60 amino acids):
MSFVVRSLLP HSMRQMCVLV AVTALLAVAH LPTPSRGSVE WVLQQVQVLH RHGSRSAIPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -71.94 (PValue = 6.699254e-01)
Components of the Score Function:
Profile Score...............................................: -14.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.75
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.75
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2620 (length 60 amino acids):
MVDAVSRYDD DEEDDALPFE GLDKASALQE CRVFNKIPLD EEGSIRAMTQ VLYLLSIGVR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -14.81 (PValue = 1.244643e-02)
Components of the Score Function:
Profile Score...............................................: -10.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2950 (length 60 amino acids):
MKEVMQRNRN RRRGPPEGRS VQNVLSTDGI PPGMFAVIDP LSKRLFIPLE SMLDTRAMHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -70.73 (PValue = 6.477303e-01)
Components of the Score Function:
Profile Score...............................................: -16.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.47
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.94
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.74
Term 14 Hydrophobicity of Tail [26..end]...................: -2.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2820 (length 60 amino acids):
MSFTEEFDGA IGIDLGTTYS CTAVFVRGQA EVIPNDMGNR TTPSCVAFYN DDVLVGDAAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -52.89 (PValue = 3.010185e-01)
Components of the Score Function:
Profile Score...............................................: -19.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -17.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2740 (length 60 amino acids):
MNYEGHLKGH RGWVTSLACP QQAGSYIKVV STSRDGTAIS WKANPDRHSV DSDYGLPNHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -87.95 (PValue = 8.846077e-01)
Components of the Score Function:
Profile Score...............................................: -8.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.32
Term 4 Volume Compensation (-1, 1, 2).....................: -1.76
Term 5 Volume Compensation (-1, 2)........................: -0.86
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.64
Term 14 Hydrophobicity of Tail [26..end]...................: -2.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2550 (length 60 amino acids):
MAAKTVRALH LEGNKLFEAG RFSEAARAFR DSVDRFQADR LSTQSAVAEF VKVAGNLCVC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -42.48 (PValue = 1.532166e-01)
Components of the Score Function:
Profile Score...............................................: -5.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2540 (length 60 amino acids):
MSTAGLSRAY AVLRQLDVLR AESITNPLPM SGDRRSRARR KERGGSDVGR SLFPSREELA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -51.81 (PValue = 2.827820e-01)
Components of the Score Function:
Profile Score...............................................: -3.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -2.14
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2420 (length 60 amino acids):
MFRRVSTRVL PTACSAAHNL NLRFCLSINV PTIAESISTG KVVNWTKKVG DAVAEDEVIC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -58.01 (PValue = 3.954720e-01)
Components of the Score Function:
Profile Score...............................................: -13.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.35
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2410 (length 60 amino acids):
MTPLAPSSFK GQLLLALMLS IGLKVLTFSL STILTRLLLP YQNGVYFTFN VYNDAVLFIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -38.77 (PValue = 1.161936e-01)
Components of the Score Function:
Profile Score...............................................: -9.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.65
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2385 (length 60 amino acids):
MNPPDIRDDP ALPQPTAEVA PVLEVDADGI RVREAVHLFL SRLIDPLLRA DPNLAVAGTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -44.69 (PValue = 1.791365e-01)
Components of the Score Function:
Profile Score...............................................: -14.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2270 (length 60 amino acids):
MAVAQSAFGN GTEDSAVLSS TPDTAAAPYG LADGMAQLSR VLHRPWLSGV YMEVTPGMAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -56.67 (PValue = 3.696856e-01)
Components of the Score Function:
Profile Score...............................................: -6.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2130 (length 60 amino acids):
MTQVPGATVK LSEMPKEMEN FAIFCAQEGL AKLRTAQELA SFIRKEFEKK YGPTWNCFVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -81.79 (PValue = 8.207659e-01)
Components of the Score Function:
Profile Score...............................................: -23.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.34
Term 4 Volume Compensation (-1, 1, 2).....................: -3.07
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2390 (length 60 amino acids):
MSDDAKSRVQ VSLRIRPVKK GVRHRTKVVV RGAEGGSVVV DDEQRTKRAY HFDHVFSGDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -66.39 (PValue = 5.635493e-01)
Components of the Score Function:
Profile Score...............................................: -17.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.45
Term 14 Hydrophobicity of Tail [26..end]...................: -2.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0090 (length 60 amino acids):
MRRSHMTPIM VALLLLLASV ASSVSVVTTE GGLAVDAIGY PNNVVRLTAK PADKWTYQPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -80.33 (PValue = 8.021759e-01)
Components of the Score Function:
Profile Score...............................................: -18.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.70
Term 14 Hydrophobicity of Tail [26..end]...................: -5.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0080 (length 60 amino acids):
MQRFSVRSAS AVATVGAART FWDPFGHQPE SMFLDRKDLC QMYPTQKPKT TGGGFGYERG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -92.16 (PValue = 9.163562e-01)
Components of the Score Function:
Profile Score...............................................: -17.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.55
Term 4 Volume Compensation (-1, 1, 2).....................: -4.75
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0010 (length 60 amino acids):
MLRCSPQLLR LRLSGVFACT AALYGRTGAF HPFSQKDEDD LLQVVKTKPR HVLRHVRQQV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -70.85 (PValue = 6.498640e-01)
Components of the Score Function:
Profile Score...............................................: -21.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.24
Term 4 Volume Compensation (-1, 1, 2).....................: -1.80
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2850 (length 60 amino acids):
MQTMAKPATS DPERGFSDDG YSAFRRLLLI ELSVLRRRYG LLSEDHHDGA GGHALPTSAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -41.32 (PValue = 1.407469e-01)
Components of the Score Function:
Profile Score...............................................: -5.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.51
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2820 (length 60 amino acids):
MPRLLHGSQR AGEEHEAEKL TKSLPRTASD LAAQSLANLW RRLFQSYVHF TQPGCLPFVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -63.28 (PValue = 5.007315e-01)
Components of the Score Function:
Profile Score...............................................: -16.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.68
Term 4 Volume Compensation (-1, 1, 2).....................: -4.92
Term 5 Volume Compensation (-1, 2)........................: -7.87
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2810 (length 60 amino acids):
MDAAMDSEGF ALGPVAASRH ANPAVAASLP RLTATMVKQS SQSMRDSYEA ELYRFKSTKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.35 (PValue = 4.415074e-01)
Components of the Score Function:
Profile Score...............................................: -9.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.08
Term 14 Hydrophobicity of Tail [26..end]...................: -4.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2790 (length 60 amino acids):
MSGSFALRKL LFDIDDEEDV NRRGYHYAGA YAPLLHSVAV LQPAAVLPKS GLPFACLCLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -35.93 (PValue = 9.289527e-02)
Components of the Score Function:
Profile Score...............................................: -3.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.19
Term 9 Volume Limitation [3..8]...........................: -0.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2450 (length 60 amino acids):
MWSPSNKRDS LINSDDTFFP FLFHFPGSHP RQMLSSFFAS RSRGSWIPAV DISEQDDGYI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -80.38 (PValue = 8.027830e-01)
Components of the Score Function:
Profile Score...............................................: -17.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.60
Term 14 Hydrophobicity of Tail [26..end]...................: -3.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2440 (length 60 amino acids):
MGSGNTKQPT AALTPTPSSS NEIQMHPGCK KTVDIFSSAD HAEAFTAAAR LPAEAAPRPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -50.94 (PValue = 2.684981e-01)
Components of the Score Function:
Profile Score...............................................: -4.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2230 (length 60 amino acids):
MRRPVDMRTA TVLGAGELGK ACACALAANR SVDFVTLLTR DAAMAAPEKA TATLPSMYSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.26 (PValue = 2.272409e-01)
Components of the Score Function:
Profile Score...............................................: -3.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2150 (length 60 amino acids):
MVLKRMDNTS IEDGLQAATL REIMVLDEVS AGTSNRDRVE RDAFRCGRAV FRPTTAAQSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -60.96 (PValue = 4.538816e-01)
Components of the Score Function:
Profile Score...............................................: -13.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.55
Term 14 Hydrophobicity of Tail [26..end]...................: -2.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2060 (length 60 amino acids):
MPSVDVLQLL QLAYHGSKDE RTQATTELEA VMQSPETGPT CLLTLLRTGV EPSLPAEQSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -32.89 (PValue = 7.233626e-02)
Components of the Score Function:
Profile Score...............................................: -7.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -3.03
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1510 (length 60 amino acids):
MKLVVDELYR SRMLMAGVYV GLAISSTYGF SIFTEHLRNK YSFNQADITT ISTVGNCCGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.46 (PValue = 5.448355e-01)
Components of the Score Function:
Profile Score...............................................: -10.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1500 (length 60 amino acids):
MKLVVDELYR SRMLMAGVYV GLAISSTYGF SIFTEHLRNK YSFNQADITT ISTVGNCCGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.46 (PValue = 5.448355e-01)
Components of the Score Function:
Profile Score...............................................: -10.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1960 (length 60 amino acids):
MSLCDQCEIG CRRVGIKDIE DASAVNADFH FSAIFQPTDP HHHQTEFAKV EGSEKYVEEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -77.09 (PValue = 7.561540e-01)
Components of the Score Function:
Profile Score...............................................: -21.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.40
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.97
Term 14 Hydrophobicity of Tail [26..end]...................: -2.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1930 (length 60 amino acids):
MSLASPSSLP PIALATQRLR TFAAQEEQAH GLTTSTALEE WATQSFEAET ERINRELVQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -68.31 (PValue = 6.015365e-01)
Components of the Score Function:
Profile Score...............................................: -9.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.67
Term 14 Hydrophobicity of Tail [26..end]...................: -1.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1830 (length 60 amino acids):
MKRTIVAWTR KFDVCVLGGG PAGIAAAVRA YELGKKACII EESRIGGADF WNGALQSKTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -51.06 (PValue = 2.704910e-01)
Components of the Score Function:
Profile Score...............................................: -0.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1790 (length 60 amino acids):
MEVPATRPEV TTTGIYGEEL NIVRQHLLRS ELCWCGDLTS RTQVLVVGSA LCAASRKLSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -27.64 (PValue = 4.566095e-02)
Components of the Score Function:
Profile Score...............................................: 7.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1730 (length 60 amino acids):
MATPRSAKKA ARKSSTKSAK AGLIFPVGRV GGMMRRGQYA RRIGASGAVY LAAVLEYLTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -20.53 (PValue = 2.301637e-02)
Components of the Score Function:
Profile Score...............................................: -2.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1710 (length 60 amino acids):
MQRAADGVFE NAYERGAVQG RAQLSSNSDC EGDNEDEDDD VDTSVKPPPA EVTALCWCAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -58.80 (PValue = 4.107326e-01)
Components of the Score Function:
Profile Score...............................................: -13.81
Term 0 Contents and Windows of DE in Region [-11..1]......: -0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1630 (length 60 amino acids):
MQEFPRRTAR KTRREVTGES LTTVSSTSTA TKDEDAQRSE RVENDLSGAL PQTSAAAASS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -47.34 (PValue = 2.141577e-01)
Components of the Score Function:
Profile Score...............................................: 2.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.17
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1605 (length 60 amino acids):
MRLRHACVTL TIAFFVLFLP LLFGGRTSSL RCPAPTPQPS LVHVCVCVFL CVAAVCVAPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -17.62 (PValue = 1.696508e-02)
Components of the Score Function:
Profile Score...............................................: 2.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1390 (length 60 amino acids):
MPQMTENICS VQGAGNTAPQ ADSPCHSVSS ALPATNGLVS NDLTNSSFSE HPLSESSGGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -59.69 (PValue = 4.283424e-01)
Components of the Score Function:
Profile Score...............................................: 0.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1270 (length 60 amino acids):
MTTQQPEWTQ AASDLMARMA ALARKKANGY LDPVHLAYVM FEDENSLASR VVRKLGAASV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -41.06 (PValue = 1.380707e-01)
Components of the Score Function:
Profile Score...............................................: -1.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.82
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1170 (length 60 amino acids):
MITATADAGS AAKAAAAPPA RMFDCLDAAS KERVTMLLSH YQVLLPVEQA SFMQELERYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -72.24 (PValue = 6.753388e-01)
Components of the Score Function:
Profile Score...............................................: -16.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.50
Term 14 Hydrophobicity of Tail [26..end]...................: -3.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0500 (length 60 amino acids):
MASSEGNSTS ANLDDVADEQ RCSRCFCAYL EPTEIHAVGD DLFSDTGASS VSGRRSRSSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -79.75 (PValue = 7.944039e-01)
Components of the Score Function:
Profile Score...............................................: -3.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.62
Term 14 Hydrophobicity of Tail [26..end]...................: -3.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1040 (length 60 amino acids):
MLTAVRPGAA GINQHAPQHA GDAARRRQSA WRTSHRRSSA FGGGNTHSSS RDSAIEVHGI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -34.10 (PValue = 8.005142e-02)
Components of the Score Function:
Profile Score...............................................: -5.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0960 (length 60 amino acids):
MSGRCFSKSL ESDVDSAAAA ESSLSATEVS TDGYRTGKQP RHVAFLLEKD LKETDTEEVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -93.92 (PValue = 9.272132e-01)
Components of the Score Function:
Profile Score...............................................: -24.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0865 (length 60 amino acids):
MDDPKQTLYI RGLPDKSSAN EVRRALYLYC TQFGPVKAVL YSKSKEFYGQ AFVVFTDVGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -50.92 (PValue = 2.681305e-01)
Components of the Score Function:
Profile Score...............................................: -10.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -3.67
Term 5 Volume Compensation (-1, 2)........................: -1.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0800 (length 60 amino acids):
MSFGGFGTGA GAGGFGAKPA TTAGFGVTPS TGAGTGAAAP ASGGRGFGGF GTGATTTTAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -40.30 (PValue = 1.305132e-01)
Components of the Score Function:
Profile Score...............................................: 3.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.01
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0730 (length 60 amino acids):
MLARTSSPGG ARPGSRRHNN ANALVHNPLN FSVQDRRLNT RLLKETQRRK AQLLGMTRHD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -96.53 (PValue = 9.410949e-01)
Components of the Score Function:
Profile Score...............................................: -21.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.05
Term 4 Volume Compensation (-1, 1, 2).....................: -4.51
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.11
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.22
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0680 (length 60 amino acids):
MRLCCLFRCL HSNGFAAHPP TRQPFTLSCP LSALPHTKEL SSSANAKPNM LPGRGRGSFQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.47 (PValue = 2.772239e-01)
Components of the Score Function:
Profile Score...............................................: -3.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.69
Term 14 Hydrophobicity of Tail [26..end]...................: -2.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0550 (length 60 amino acids):
MSALMECPPE ATEIAQCCAA IKAATPLTLS TPLAVAESQP TGGSTMRPKR PAHHDASVTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -48.88 (PValue = 2.363723e-01)
Components of the Score Function:
Profile Score...............................................: 3.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.68
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0540 (length 60 amino acids):
MVRIRSLAKE LRQLELQKQT ASLPPPRAAS SDDVLDDATR SATSSRKPEA PSCSSSPRDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -73.04 (PValue = 6.894884e-01)
Components of the Score Function:
Profile Score...............................................: -0.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.01
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.29
Term 14 Hydrophobicity of Tail [26..end]...................: -3.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0470 (length 60 amino acids):
MQTCISRHHT SKLTLVGTYV GSKVAKAVLM SAATGKLTPE IVGEALMSSS TIRGHVQREA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -68.19 (PValue = 5.990276e-01)
Components of the Score Function:
Profile Score...............................................: 5.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0410 (length 60 amino acids):
MLSLLIDQCG ADASDLPQLV RLNELIRAEE EGTGGGSIVA HTLVATQAPP SPPLAAPTVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -40.15 (PValue = 1.290162e-01)
Components of the Score Function:
Profile Score...............................................: -0.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0400 (length 60 amino acids):
MEESYVEGNL GPVFSNAEPL SLPIVARILH EKRIGAEETD KIKGVLIQSC SEAVNILQED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -67.22 (PValue = 5.800877e-01)
Components of the Score Function:
Profile Score...............................................: -20.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6420 (length 60 amino acids):
MLEFLLRGYL VYLSFVQPVI YGAQLCRSPD PDALQVTNVT LTLIFAWLLE VADVLFLTPF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -21.27 (PValue = 2.479227e-02)
Components of the Score Function:
Profile Score...............................................: -5.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.29
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6380 (length 60 amino acids):
MNIREKTVYN ALPKLPGFSF AELQHPATHG RRQYCTIDEE GTRTVKDAAA LDGSAVAAGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -55.22 (PValue = 3.425359e-01)
Components of the Score Function:
Profile Score...............................................: 0.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.45
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.11
Term 14 Hydrophobicity of Tail [26..end]...................: -0.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0250 (length 60 amino acids):
MSLPVIDIAP LYSDNKADLL RVAHAIDEAC RTWGFFYITG HHIPKERIEQ LTTMASKFFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -77.56 (PValue = 7.632039e-01)
Components of the Score Function:
Profile Score...............................................: -23.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.64
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.21
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0190 (length 60 amino acids):
MEHYEDSFES ATTAMNEEEE AMSVRTSSTA ATSGDSVDAG DDGSVGDVDD AISGGKGMSD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -65.00 (PValue = 5.355942e-01)
Components of the Score Function:
Profile Score...............................................: -7.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0150 (length 60 amino acids):
MMSMRPTTGM APPPTGMAFS ATGSSHTGPM RPTTTMGGGT TLGRIQAQVQ EGTFTSTVYG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -52.55 (PValue = 2.953155e-01)
Components of the Score Function:
Profile Score...............................................: -8.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.42
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0050 (length 60 amino acids):
MRRPEPWQRL LSHVRHTIAT PFVLRIGTGP PGSLPPVAAA PHPPSALPTI AANYSELSAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -46.30 (PValue = 1.999213e-01)
Components of the Score Function:
Profile Score...............................................: -4.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0030 (length 60 amino acids):
MHRFRVCALG AAFCVARRWR SGGGPGDRRV RTDWYRCYPS LMEEKDRDMY HCYYPYLFDH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -84.94 (PValue = 8.562055e-01)
Components of the Score Function:
Profile Score...............................................: -25.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.59
Term 4 Volume Compensation (-1, 1, 2).....................: -3.39
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6910 (length 60 amino acids):
MSFMQTGPQS MLKDGSTFLD DPVLKNIEAC RELSKITRSS MGPNGLCKMV INHLNKLFVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -33.36 (PValue = 7.523363e-02)
Components of the Score Function:
Profile Score...............................................: -7.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6830 (length 60 amino acids):
MSCECDDKSP LLDNEKGALY HGVAQANPGE EYDWRQLHST SIFVDNHTFN SLEEVQGSLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -39.46 (PValue = 1.224829e-01)
Components of the Score Function:
Profile Score...............................................: -11.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6670 (length 60 amino acids):
MSWWSFWSRR SDSKEAATSD NDNRATKTAE PAEMQSFTAA ELAQFTGENG TPIYMSVKGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -67.43 (PValue = 5.841204e-01)
Components of the Score Function:
Profile Score...............................................: -14.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.88
Term 4 Volume Compensation (-1, 1, 2).....................: -3.75
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.29
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.91
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6620 (length 60 amino acids):
MVSFDSVPPD TAAIAAVSAS VFRYVQTVAP SALHVFACVV YVIIMICASH VHPRVVNTTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -33.50 (PValue = 7.609788e-02)
Components of the Score Function:
Profile Score...............................................: -9.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.56
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6560 (length 60 amino acids):
MELSFPDKYY EVAKYFDYYV GNLEESPLLS DAQRLMFYAL RQQADHGQCT TAAPSFWNSR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -77.51 (PValue = 7.623816e-01)
Components of the Score Function:
Profile Score...............................................: -15.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.89
Term 14 Hydrophobicity of Tail [26..end]...................: -3.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6540 (length 60 amino acids):
MSADRPNRCC PTEKGAAQCE YNPAGNDLYM VGPYNSKAGV VLVCDIFGLL PNSKRFADVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -46.58 (PValue = 2.037000e-01)
Components of the Score Function:
Profile Score...............................................: -10.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6345 (length 60 amino acids):
MYLCDLLFLF DKFQSSLPFS TLSLLYYPPL RVLSFHGCTH ILRHGFVMCE RIDSSRLERQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -88.94 (PValue = 8.928999e-01)
Components of the Score Function:
Profile Score...............................................: -13.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.28
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.38
Term 14 Hydrophobicity of Tail [26..end]...................: -3.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6250 (length 60 amino acids):
MLYDEEECIK VIVVGDGNVG KTCMLRRFVR GDFVEQYRKT IGAEFMEKDV FLRSSKTMVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.90 (PValue = 6.320691e-01)
Components of the Score Function:
Profile Score...............................................: -14.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.37
Term 14 Hydrophobicity of Tail [26..end]...................: -3.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6180 (length 60 amino acids):
MCVVHALTST QTVCMMSADP NSFEAIRPKL TAQTLQDIEG LDPQKYGFGR EECCGPIPTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -79.89 (PValue = 7.962158e-01)
Components of the Score Function:
Profile Score...............................................: -19.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.76
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.87
Term 14 Hydrophobicity of Tail [26..end]...................: -2.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6170 (length 60 amino acids):
MAQPCNSLSE FPYAEAAKSL AKRTSLTNQG APPPWTKSIM ESTAVCTEDK VFVIGGMDTC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -44.82 (PValue = 1.807401e-01)
Components of the Score Function:
Profile Score...............................................: -2.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6130 (length 60 amino acids):
MSTRRAHETP IAASSAASTV SSATSSKRPT PQLSSFAIRL RGSKGSSCPA QKTPVSDLCV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -33.21 (PValue = 7.428351e-02)
Components of the Score Function:
Profile Score...............................................: 2.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6110 (length 60 amino acids):
MLNTAFSTAD GRRLPRDLTD QQKRDIEEAF RVLDVKGVST ITPNDLKVAL RALGYEPDKD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -79.27 (PValue = 7.878436e-01)
Components of the Score Function:
Profile Score...............................................: -20.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.93
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6000 (length 60 amino acids):
MADALPSGDR TTATTVGAAA SHRAEEERQQ AEKMALSQQL SEVERQLSEA SQSVVALEKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.10 (PValue = 3.588875e-01)
Components of the Score Function:
Profile Score...............................................: -17.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.20
Term 4 Volume Compensation (-1, 1, 2).....................: -2.89
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5910 (length 60 amino acids):
MLRNALSCFL EQLELARLTE TLPSNIDYAE LVAMVQQRLQ GAPGKTLGVF EHLRAKEIRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.73 (PValue = 1.923976e-01)
Components of the Score Function:
Profile Score...............................................: -13.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.55
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5845 (length 60 amino acids):
MLRFVPRRLA IGAYSMFMIE QKNNPKLKGL SVGDRGKMTS KLYKSLSASD KAALDKRAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -54.48 (PValue = 3.292090e-01)
Components of the Score Function:
Profile Score...............................................: -0.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5840 (length 60 amino acids):
MLRITDLRCS VRRAKVFEIF CREQLLTNMS LRELTQTERH KAMSQLFKKL SEEQLLALKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -57.90 (PValue = 3.932968e-01)
Components of the Score Function:
Profile Score...............................................: -11.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.66
Term 4 Volume Compensation (-1, 1, 2).....................: -4.75
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5830 (length 60 amino acids):
MRCFSTKSTA PTKGFHDNAS GKGSNSVPVK SSALFIEALS KRRTIYSLGN KLSQSHSEVI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -61.19 (PValue = 4.583698e-01)
Components of the Score Function:
Profile Score...............................................: -12.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.85
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.00
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1040 (length 60 amino acids):
MMMEVVVALR LLTIHVLAAL LLVLWSLPLA EGPWPLSVQA ARRSTDAHAE RPSIHPRKYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -82.99 (PValue = 8.349485e-01)
Components of the Score Function:
Profile Score...............................................: -9.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.78
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.29
Term 14 Hydrophobicity of Tail [26..end]...................: -3.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0380 (length 60 amino acids):
MASKLDIIVL GATGFTGRLT CRYLARTAEL KGRWGIAGRS QAKLAALKAE LDINVPTFVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -39.81 (PValue = 1.257923e-01)
Components of the Score Function:
Profile Score...............................................: -11.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.30
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.70
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0270 (length 60 amino acids):
MSPQLIDRVN ASENLIQDIF KRYAPSEIGV AFNGGKDSVV MFELLRRAVT APVLAQCCIF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -32.53 (PValue = 7.018481e-02)
Components of the Score Function:
Profile Score...............................................: -5.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0160 (length 60 amino acids):
MPGGLTRKER RRWETSRRLE LQMSRLNSNA AVAKEMIEES AAQRRGTASD VVDGDAVAAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -43.22 (PValue = 1.615426e-01)
Components of the Score Function:
Profile Score...............................................: -11.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0010 (length 60 amino acids):
MRRVLLCTLR GCLHRGLTLR PESTVDPARY PLGYVPVDGS ESIDLVYALL KRGHFVAPLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -37.56 (PValue = 1.057874e-01)
Components of the Score Function:
Profile Score...............................................: -11.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.64
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1690 (length 60 amino acids):
MFDIREKDVR LEVLSKSPVR PISETHRFGL LVLGLFGMIC GSFGSYTFNL VSGSLQERYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -76.22 (PValue = 7.426198e-01)
Components of the Score Function:
Profile Score...............................................: -6.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1600 (length 60 amino acids):
MPNLASVRVT PVLPHGAYES KAPHRTGASY VDVISSTERE VMEQCLQEQL AVVANLVVDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -33.90 (PValue = 7.871755e-02)
Components of the Score Function:
Profile Score...............................................: -8.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.74
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1550 (length 60 amino acids):
MEQSSSPPAS PSPSPVVLPT WRVGHAVTSS SRCCTAYRGR YVVYAATDNS IALVDVLAEH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -23.22 (PValue = 3.009777e-02)
Components of the Score Function:
Profile Score...............................................: -8.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1520 (length 60 amino acids):
MSTLSYQQQY QQILADLAEV QREDVYVSAV RVPMDAKARH AYYAQYWLSL YVRYVRLARQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -57.52 (PValue = 3.859475e-01)
Components of the Score Function:
Profile Score...............................................: -15.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -3.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1410 (length 60 amino acids):
MQRQSSTKSG CRNASELSPV RSSAYEMRNR ESPPPMRSGS PLSPSAIFVK RAVSNGRPHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -56.12 (PValue = 3.592203e-01)
Components of the Score Function:
Profile Score...............................................: -5.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1400 (length 60 amino acids):
MPLLPPHLLE ALVAECGETT LPELAHLWKR ETELAQAAAC GDALAARAIA EGGRAPLNCV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.92 (PValue = 1.948050e-01)
Components of the Score Function:
Profile Score...............................................: -5.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.47
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1350 (length 60 amino acids):
MPRVSVFLSY ADSFVGTRLL RQFQQYPSHY DIYGCVWDAA AAEQLNAAAS AAQQQLQQPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -67.15 (PValue = 5.785195e-01)
Components of the Score Function:
Profile Score...............................................: -14.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1310 (length 60 amino acids):
MQLGGPAASH HVGGARHCRL VVLSVAVLLV VLFSHGVEHA QGFAFVPVVN TFARPEGSGH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -80.93 (PValue = 8.099390e-01)
Components of the Score Function:
Profile Score...............................................: -12.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.28
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1240 (length 60 amino acids):
MHQKKRKTRH TRTLRPCPLH GSSAKVTVDR LSSVMSHLET CMHLDTQPAL HTRKLCSCNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -46.63 (PValue = 2.042527e-01)
Components of the Score Function:
Profile Score...............................................: 0.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -1.30
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.81
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0990 (length 60 amino acids):
MARRDRVPRH KSHTHKRNKN AKLSPFQREQ KRAKMANQAP TAQTMGSLDS IPHSQRHIFE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -71.01 (PValue = 6.528930e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.13
Term 14 Hydrophobicity of Tail [26..end]...................: -3.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0670 (length 60 amino acids):
MICASTSYAF NLFSGSLRDK YNFDSRQMST INTVGMVFAY FLLPYGTIYD YLGPLPVYIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -40.56 (PValue = 1.330987e-01)
Components of the Score Function:
Profile Score...............................................: -16.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0830 (length 60 amino acids):
MSRTFEDNGC ELPSSAAQRV YVNNMNTLQA TTSLPERTPY SLLERNTEAP GSSTANYVGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -63.58 (PValue = 5.068114e-01)
Components of the Score Function:
Profile Score...............................................: -4.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.66
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0820 (length 60 amino acids):
MGVDVGESAI GVDAVARPIG YGPFSAAAKA RLAREKAHKA VETCDSAAAA ASATVMKNVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -40.61 (PValue = 1.335451e-01)
Components of the Score Function:
Profile Score...............................................: 2.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0590 (length 60 amino acids):
MDLLHFISLV IDLRDYPGYA TCIRATEYPG LALCEYNAVA GMRYTVPLGY AASAVYFYLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -47.19 (PValue = 2.120129e-01)
Components of the Score Function:
Profile Score...............................................: -3.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0490 (length 60 amino acids):
MSPAADTTHS TTKPCAPNRS SIPETCSRAP NGTRASAADE VTLLTAPQFA KSTKDTRSTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -46.77 (PValue = 2.062191e-01)
Components of the Score Function:
Profile Score...............................................: -9.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.17
Term 14 Hydrophobicity of Tail [26..end]...................: -3.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0470 (length 60 amino acids):
MDGIVSRGAR LTFLNADFAE SEACSSALNV SLQPHQGNAT WVYFARGKLA YSNSITLVSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -33.50 (PValue = 7.613377e-02)
Components of the Score Function:
Profile Score...............................................: -3.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0440 (length 60 amino acids):
MLVTMEDYQI IESIGEGSFG KVYKARIKGT GQIVAMKFIV KKGKNEKELK NLRSEIEILT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -72.06 (PValue = 6.721620e-01)
Components of the Score Function:
Profile Score...............................................: -16.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.23
Term 4 Volume Compensation (-1, 1, 2).....................: -4.69
Term 5 Volume Compensation (-1, 2)........................: -3.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0280 (length 60 amino acids):
MREAICIHIG QAGCQVGNAC WELFCLEHGI QPDGSMPSDK CIGVEDDAFN TFFSETGAGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.88 (PValue = 5.532048e-01)
Components of the Score Function:
Profile Score...............................................: -13.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0180 (length 60 amino acids):
MCALPVMEGA RGSTLQVCGE RHTMSLSLAT ALYADATRLY RLGDLHHARG AAEEALLSLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -44.35 (PValue = 1.749982e-01)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.78
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.23
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0160 (length 60 amino acids):
MSAGDTPVSL FLQACNQEGV KTPNPKLVEF FQSHETFDSI LEIDLSNNYI GNRGLLAVLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -23.54 (PValue = 3.104592e-02)
Components of the Score Function:
Profile Score...............................................: -10.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0030 (length 60 amino acids):
MAEPRIKQLR CAATEVPEDQ RNHLQHLYES IEQLSRRCRH LENASERKSV VIEDLRAHVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -44.02 (PValue = 1.709421e-01)
Components of the Score Function:
Profile Score...............................................: -0.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.18
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1380 (length 60 amino acids):
MVQPEQHIVY AIHEYAIPGS GFLRLKAGDI IHVDEADASG WWLGTNLRGQ KGVFPSTYTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -50.85 (PValue = 2.669906e-01)
Components of the Score Function:
Profile Score...............................................: -7.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1100 (length 60 amino acids):
MIGEFFLLLT AGLALYGWYF CKSFNTTRPT DPPVVHGAMP FVGHIIQFGK DPLDFMLNAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -67.90 (PValue = 5.933441e-01)
Components of the Score Function:
Profile Score...............................................: -17.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1000 (length 60 amino acids):
MDTVKHVYYF GGSKADGNRD MKMLLGGKGA NLAEMVNIGI PVPPGFTITT KVCAAYQQSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -52.62 (PValue = 2.964728e-01)
Components of the Score Function:
Profile Score...............................................: -14.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.32
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0970 (length 60 amino acids):
MSSKTPKLFN KWSFEGLETS ELALRDHIST TAAYVPHTSG RWQKRRFYKA RMPIVERLAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -64.63 (PValue = 5.279929e-01)
Components of the Score Function:
Profile Score...............................................: -8.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -6.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.19
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0890 (length 60 amino acids):
MTPLPQQPPT PPAASPYITP ESKEKGDAGI YAALDAMQLS RALHGVTSSR LDQQQLQQVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -51.39 (PValue = 2.758369e-01)
Components of the Score Function:
Profile Score...............................................: -2.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.45
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0740 (length 60 amino acids):
MSTSRDDAAG EACLLPPHGP ANMMSTYMTR YDYDYNRDPS LTGSDGGSGG GFEQEISGEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -44.88 (PValue = 1.815357e-01)
Components of the Score Function:
Profile Score...............................................: -3.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0720 (length 60 amino acids):
MPPKRYPNRL LVLCASINDV TAWPFWKFLQ MKKIRGVTDM ALLAFNSDGG SFEARIDGDK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -72.43 (PValue = 6.787799e-01)
Components of the Score Function:
Profile Score...............................................: -3.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.66
Term 14 Hydrophobicity of Tail [26..end]...................: -2.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0710 (length 60 amino acids):
MTLIDQHETT VQQVIDKIDF LRGEREARYT EFKQETQQRE AELQHLRNER SDLSLQVQEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.40 (PValue = 6.225433e-01)
Components of the Score Function:
Profile Score...............................................: -16.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0520 (length 60 amino acids):
MYTFTISGAY GIEEAVMGGG VLLTIVSIVV IPVIMGAPIV LVVAELAAAV PSNAGFLMWI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -33.53 (PValue = 7.632561e-02)
Components of the Score Function:
Profile Score...............................................: -2.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0510 (length 60 amino acids):
MPTAFVGVSA VPPLERQKQR LANMDPSVYT VFEECRYKSL LAICHLARLI DAAIRGPDES
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -75.89 (PValue = 7.373380e-01)
Components of the Score Function:
Profile Score...............................................: -26.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.62
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.12
Term 14 Hydrophobicity of Tail [26..end]...................: -2.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0380 (length 60 amino acids):
MFKKKISSLT TTVASAAAAT TATAKVKATT SAHTPVKRGS KAKTLALIEK HRKILDEARR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -76.04 (PValue = 7.397761e-01)
Components of the Score Function:
Profile Score...............................................: -7.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -56.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0360 (length 60 amino acids):
MVALPAFKFV FLAIRQVTRP VAKQIVSRAN TKRALTYCVC MGLGRVSLGL SGVIAEWTRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -34.88 (PValue = 8.535417e-02)
Components of the Score Function:
Profile Score...............................................: -2.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.72
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.54
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0280 (length 60 amino acids):
MRDSPMPPPR PAPWAKGGGS VRLRHSFSIR TILAGAPLTT PSVTSDATSR IQDKEVRLLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -40.81 (PValue = 1.355904e-01)
Components of the Score Function:
Profile Score...............................................: -4.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.54
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0270 (length 60 amino acids):
MFYDVNKGYV TRVAVVFATA FGMSYAVYKL VLQPMQQRRP LAKRWCWCAP PVPITLVEKN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -64.07 (PValue = 5.166819e-01)
Components of the Score Function:
Profile Score...............................................: -25.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -1.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0050 (length 60 amino acids):
MEYLLPVETC FRCGHRYAFR LSRFGCVFSC ACDECIDVLK VAAVFSAAVR GRTAAVPFVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -34.73 (PValue = 8.427527e-02)
Components of the Score Function:
Profile Score...............................................: 6.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2460 (length 60 amino acids):
MREENNVPAE WAPRDTHRLD PLQLLPPSQR HCGQSSAAES GQGCHSPSRG KPEVHSTRVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.84 (PValue = 3.540251e-01)
Components of the Score Function:
Profile Score...............................................: -3.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2400 (length 60 amino acids):
MPVCIECGHG VPRIIKPDTE TVERCGMCGR ICDICYEFGD VQIWIDVVLL RHRAWAHVLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -58.29 (PValue = 4.008521e-01)
Components of the Score Function:
Profile Score...............................................: -14.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.00
Term 4 Volume Compensation (-1, 1, 2).....................: -3.00
Term 5 Volume Compensation (-1, 2)........................: -3.26
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2360 (length 60 amino acids):
MGRTNAKKQE AREERLSKLP QSDRLTKIAI IKKKEGRVLD AAEKHALKMS SEHGEILRLW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -55.84 (PValue = 3.541380e-01)
Components of the Score Function:
Profile Score...............................................: -9.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2320 (length 60 amino acids):
MEAAATPEAN PAALALRKVH PAARWVAGLF SPMSLRDQGY CADMFQCILW GSLAVSFPVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -9.08 (PValue = 6.235787e-03)
Components of the Score Function:
Profile Score...............................................: -4.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.70
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2290 (length 60 amino acids):
MQTATAPFIL RSLYKDAYIS DMQIARPITE LMMNTIGAQL TNKYDTHIPA IACSLYTLFS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -41.99 (PValue = 1.479039e-01)
Components of the Score Function:
Profile Score...............................................: -10.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2280 (length 60 amino acids):
MPLTAPPRRH GNIKVFLNGR IFVGPDWRIM TLSVVLISVC SLVFVFFTNE IVAARITVGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -39.73 (PValue = 1.250561e-01)
Components of the Score Function:
Profile Score...............................................: -7.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.36
Term 4 Volume Compensation (-1, 1, 2).....................: -1.21
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2235 (length 60 amino acids):
MWCGTPVEAA VLPGEVAHLY SRARQGGILF HLGEDVPTPP PQISSSSFLC LSTCVYACVW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -38.04 (PValue = 1.098363e-01)
Components of the Score Function:
Profile Score...............................................: 1.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.46
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2220 (length 60 amino acids):
MPRQPTKNRI NMHDIVEQPL SAIPDAVDAV LRRPEPLDEL EVQSIFFESS YILLRAEEAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.69 (PValue = 2.336529e-01)
Components of the Score Function:
Profile Score...............................................: -17.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.71
Term 4 Volume Compensation (-1, 1, 2).....................: -0.86
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2200 (length 60 amino acids):
MSSYEIQPIV KGTKRDPSLR KYNKAAGAGP FGAAPASLRT KKSALAQSAA APPGEAVDAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -50.72 (PValue = 2.650123e-01)
Components of the Score Function:
Profile Score...............................................: -6.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2140 (length 60 amino acids):
MFARSAIRRW VNKDTKVIVQ GMTGKAGTFH TKEAMAYGTK VVGGVSPKKA GTTALGVPVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -11.99 (PValue = 8.950156e-03)
Components of the Score Function:
Profile Score...............................................: -2.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.15
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0920 (length 60 amino acids):
MQKQQQSFTM LQRAPRDGGS DSHVEACVGQ TPESCGVLLK GSRSLSPAPC FPSDSISPSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -40.90 (PValue = 1.364659e-01)
Components of the Score Function:
Profile Score...............................................: 4.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0890 (length 60 amino acids):
MKRLSSHHAI VCGAASATAA STRFGDVVGG GSSCTATSPL FAAQRGRFYR PLVNQGINLW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -46.83 (PValue = 2.070974e-01)
Components of the Score Function:
Profile Score...............................................: -11.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2090 (length 60 amino acids):
MMRKTSVCAI AATRRALVGN GPTFHTGGDN NNISDIQNAF PMNERGIRSS SPFPEPNTAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -42.60 (PValue = 1.545236e-01)
Components of the Score Function:
Profile Score...............................................: 5.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1960 (length 60 amino acids):
MPPPTHTDFF SFLDSPITER SIAKGKAALL AHAYTNTRKL ENRLTPLTAL SISTKEDAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -75.29 (PValue = 7.277114e-01)
Components of the Score Function:
Profile Score...............................................: -16.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.00
Term 4 Volume Compensation (-1, 1, 2).....................: -2.40
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.86
Term 14 Hydrophobicity of Tail [26..end]...................: -2.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1900 (length 60 amino acids):
MFSPRTHAHT HTHNCKIPSS SRSSLIAAHG SLPRSLPRTS AAKRIIASAP VRRNGMINMQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -71.40 (PValue = 6.601162e-01)
Components of the Score Function:
Profile Score...............................................: -5.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.76
Term 14 Hydrophobicity of Tail [26..end]...................: -3.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1890 (length 60 amino acids):
MMGSLFVEKC TPQLYTQGAP QQHTTARMSS SVRDPPQATT CSTATPEHPV VELQPALRQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -45.13 (PValue = 1.845831e-01)
Components of the Score Function:
Profile Score...............................................: -0.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.76
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1690 (length 60 amino acids):
MLAQCSLFVQ PRVFKGLVMR SHAPVACWAA SLPWMTQQQR RRSSFASATP AAPSTDAGKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.32 (PValue = 3.629970e-01)
Components of the Score Function:
Profile Score...............................................: -3.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.71
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1450 (length 60 amino acids):
MLWWTARLLF GAGGTQGGVK KLSAVKAEYC DWALKENTRA LIGSIHHPLV TEYLIRLHEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -66.56 (PValue = 5.669642e-01)
Components of the Score Function:
Profile Score...............................................: -17.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.69
Term 4 Volume Compensation (-1, 1, 2).....................: -0.95
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.85
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1445 (length 60 amino acids):
MSAQDRARPQ SGTAVEEEPN KQAPESLFQR CVRKWMGFSD YLSTSLLGGP RCIKLAHVIN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -41.16 (PValue = 1.391050e-01)
Components of the Score Function:
Profile Score...............................................: -5.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1310 (length 60 amino acids):
MGPRKSNAFA SGKDDGAAAG KVRKVGGNGV GGSSATNSGS HKHGGAAAAT MADIYTNEER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -71.12 (PValue = 6.549680e-01)
Components of the Score Function:
Profile Score...............................................: 0.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.24
Term 14 Hydrophobicity of Tail [26..end]...................: -3.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1290 (length 60 amino acids):
MLPRSLPFRC WHLFSCFCPA PIPSPIPLLR TRTHAPCNPF SLVLLCSLTL FHSPCKKCSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -55.79 (PValue = 3.531620e-01)
Components of the Score Function:
Profile Score...............................................: -11.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.16
Term 4 Volume Compensation (-1, 1, 2).....................: -4.51
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.76
Term 14 Hydrophobicity of Tail [26..end]...................: -4.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1200 (length 60 amino acids):
MTSARSYPPL YPAGVFVVRS KQELAPLVAR LRAARRLKPG RNVTVFDGEH FAEVADALEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.30 (PValue = 2.743648e-01)
Components of the Score Function:
Profile Score...............................................: -8.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.82
Term 4 Volume Compensation (-1, 1, 2).....................: -3.22
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1140 (length 60 amino acids):
MPKGPRTAEV SRRLVDAYVT TLRQHLPTYC IRQLDKLPRA EEHQLTRLRQ SYPGTPAELL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -71.17 (PValue = 6.558546e-01)
Components of the Score Function:
Profile Score...............................................: -22.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.00
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -2.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1030 (length 60 amino acids):
MHLDQVLAAA TVAKAHAHIN KHQCALAVRR LRLIALTLRQ MPRPAPSQLL LTAIQSLCLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -25.11 (PValue = 3.609028e-02)
Components of the Score Function:
Profile Score...............................................: -16.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.03
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0960 (length 60 amino acids):
MPREIITLQA GQCGNQVGSE FWRQLCLEHG IRLDGVVEPY AVGGEDRKDV FFYQADDDHY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -105.87 (PValue = 9.740806e-01)
Components of the Score Function:
Profile Score...............................................: -18.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.50
Term 14 Hydrophobicity of Tail [26..end]...................: -4.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -28.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -71.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0760 (length 60 amino acids):
MACLSEPSFL LRHIRRCGAD EPRQTSQHTT ASTTGATSDS SYTTEVFLKV GVPASFVPAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -24.19 (PValue = 3.304662e-02)
Components of the Score Function:
Profile Score...............................................: -3.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0660 (length 60 amino acids):
MLRRTCASRG HATSNLFAPP HSGRWFNPPH QWTMSDTFVP AFFLGFSPMA ICVYLYHAAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -58.93 (PValue = 4.133133e-01)
Components of the Score Function:
Profile Score...............................................: -5.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.29
Term 4 Volume Compensation (-1, 1, 2).....................: -2.68
Term 5 Volume Compensation (-1, 2)........................: -2.53
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0590 (length 60 amino acids):
MSPSAAPTRG TPDSCRCCHD TTRSSPLLGH VSACCLNDSC ESTAHRNSAC LLFQSGVSSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -31.14 (PValue = 6.227556e-02)
Components of the Score Function:
Profile Score...............................................: -11.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0550 (length 60 amino acids):
MTGTQAAHAG GAANSRRGVS QRTSTAAAFS PSSNMRPAVA HPTAVDAAAK QRAQRRLRAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -64.67 (PValue = 5.288619e-01)
Components of the Score Function:
Profile Score...............................................: -7.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.13
Term 14 Hydrophobicity of Tail [26..end]...................: -2.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0170 (length 60 amino acids):
MLRASAGSIQ FTPVYECTTP NAPYAYLVDI DGVRILFDCG WNDEFDTSFL NKLKPHLPTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -43.15 (PValue = 1.607758e-01)
Components of the Score Function:
Profile Score...............................................: -5.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.75
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.24
Term 9 Volume Limitation [3..8]...........................: -2.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3990 (length 60 amino acids):
MRKSTSVYTL RSHRCFITLR AVIPILIFIC LCGAVGTIFL TSSHQSALGW TREPTTSAPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -56.19 (PValue = 3.606196e-01)
Components of the Score Function:
Profile Score...............................................: 0.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3930 (length 60 amino acids):
MCIQDPGGDN KGAMELDTMS LSQLYATGYR MYRKKHQPDS KQNFTLPTSP PDFDGDAPID
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -64.06 (PValue = 5.165689e-01)
Components of the Score Function:
Profile Score...............................................: -10.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.33
Term 4 Volume Compensation (-1, 1, 2).....................: -3.75
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3850 (length 60 amino acids):
MRTAVGSGAG ASAAARAIPT AVPLTVADID ALARRDGVVS SDAVVSQQGT VASSRSVAEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -26.07 (PValue = 3.949854e-02)
Components of the Score Function:
Profile Score...............................................: 1.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3000 (length 60 amino acids):
MANGYSILGV PVDVSIWTLM MIITALVVLA GLMAGLIISV FSLDKDRLKV LAQRSETVEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -82.35 (PValue = 8.274994e-01)
Components of the Score Function:
Profile Score...............................................: -27.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.02
Term 14 Hydrophobicity of Tail [26..end]...................: -3.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3700 (length 60 amino acids):
MLRTLEGAAV EFDVDRQASA DRVIIRNRLT PITAESYRQR PPVDFLSPAM LSWAGPRAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -62.47 (PValue = 4.842236e-01)
Components of the Score Function:
Profile Score...............................................: -14.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3690 (length 60 amino acids):
MSSDTSPPGG YRPPLQAAAS IPSSIADVGR KNSSSPLRSC GLADAASMWD ETRSVSSSVR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.41 (PValue = 4.627846e-01)
Components of the Score Function:
Profile Score...............................................: -6.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.59
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3660 (length 60 amino acids):
MRSAVTCIKS PGAALFTDTA TCRTITLSRP DALNVMSLPM VQDLHRLYIT EPHPNEDAVY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -94.63 (PValue = 9.312472e-01)
Components of the Score Function:
Profile Score...............................................: -23.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.02
Term 4 Volume Compensation (-1, 1, 2).....................: -3.51
Term 5 Volume Compensation (-1, 2)........................: -3.76
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -66.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3610 (length 60 amino acids):
MAPPKASLPA RIFAGDFMGI NWNRVSWMAP YNNFYPITMC GGWGGRMWSS FIQYGRFDNR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -72.38 (PValue = 6.778522e-01)
Components of the Score Function:
Profile Score...............................................: -8.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.86
Term 14 Hydrophobicity of Tail [26..end]...................: -4.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3512 (length 60 amino acids):
MDAPVNVFLR FGLSHSERLN HLLERVGTAQ AAFRIVGPRQ QEGVARTPAH PHDGADCARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.74 (PValue = 4.493134e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3500 (length 60 amino acids):
MDAPVNVFLR FGLSHSERLN HLLERVGTAQ AAFRIVGPRQ QEGVARTPAH PHDGADCARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.74 (PValue = 4.493134e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3490 (length 60 amino acids):
MLRKCPLRRW RPEKRLPLRF RDVPEEFTDL RTADSRPVLF TAKRPAPLRD VTRLSDVLLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -48.29 (PValue = 2.276786e-01)
Components of the Score Function:
Profile Score...............................................: -18.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.07
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3340 (length 60 amino acids):
MLNKVIQDIY HLRRVHAVLP DAVLGDTLKN KLLRLSLQPS LQELKHRAQQ ACVSAHEDNQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -101.60 (PValue = 9.616815e-01)
Components of the Score Function:
Profile Score...............................................: -22.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.63
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.72
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3240 (length 60 amino acids):
MPRIQLQSVN HFSAWLHDEI LTEVPFGLSL RLRPLPMQGS TAVSGGGFVL ARPHVGHVIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -30.27 (PValue = 5.776008e-02)
Components of the Score Function:
Profile Score...............................................: 1.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.28
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.40
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3150 (length 60 amino acids):
MASMVRHYSL SNPPPVEGAL DGRETVHEAE ILEVQALQAE RDGECGRGVL LMERALQIRC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -54.81 (PValue = 3.351223e-01)
Components of the Score Function:
Profile Score...............................................: -6.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.35
Term 4 Volume Compensation (-1, 1, 2).....................: -1.20
Term 5 Volume Compensation (-1, 2)........................: -3.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.93
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2890 (length 60 amino acids):
MEERGDALMA EAEKQLKKRS WFSSSDAKVD EAHDTFLQAA TQYKAAGNFA KVAQAYKRAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.15 (PValue = 4.375932e-01)
Components of the Score Function:
Profile Score...............................................: -1.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.47
Term 14 Hydrophobicity of Tail [26..end]...................: -2.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2880 (length 60 amino acids):
MKPGPSPNSP HLELGSSETA PRFSSKPSFS EALLLSAKAC APSVQPTSTP TRSPPGEVAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -56.99 (PValue = 3.757270e-01)
Components of the Score Function:
Profile Score...............................................: -12.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2830 (length 60 amino acids):
MNVLALSGES DFHSRGAGGQ SYAETVNANP TSSSSRSSPR MEVHETNNAG EFVVAPAAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -48.64 (PValue = 2.328208e-01)
Components of the Score Function:
Profile Score...............................................: -6.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2810 (length 60 amino acids):
MAKGTVKRKA TPSSLRKKKA QQRIRKQIRT KLQKKKPSWK TALAKVYTGG DTTLKDKKKD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -81.00 (PValue = 8.108018e-01)
Components of the Score Function:
Profile Score...............................................: -5.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.66
Term 14 Hydrophobicity of Tail [26..end]...................: -3.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2760 (length 60 amino acids):
MSRPSALRKP LLYTPASSTG RPASSPRRRQ RQPLQPRGSA STIADSPRRL ISYYLSKAAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -44.35 (PValue = 1.749175e-01)
Components of the Score Function:
Profile Score...............................................: -5.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2750 (length 60 amino acids):
MEPEPPPELV QRALAACRVV LHEVSRRVES TVPNAAAKAE LLDGVKAAES AVARSERLFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -57.19 (PValue = 3.795313e-01)
Components of the Score Function:
Profile Score...............................................: -6.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.94
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.81
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2710 (length 60 amino acids):
MTKFLKPGKV VIVTAGRYAG HKAVIVQNSD VVTKERPYGR ALLAGIKKYP KKVVRGMSKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -68.03 (PValue = 5.960558e-01)
Components of the Score Function:
Profile Score...............................................: -22.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.84
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1920 (length 60 amino acids):
MSRVPISEEQ AQQMVAKQQA QQERMEALEE QKENMLRAFV SAEGRERLKR IAQVKAGRSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -66.59 (PValue = 5.675743e-01)
Components of the Score Function:
Profile Score...............................................: -12.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.22
Term 14 Hydrophobicity of Tail [26..end]...................: -2.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2600 (length 60 amino acids):
MVMAGKEDAA AAYCANLAAA YERLAHVLAV PLIDQELYSC LFLHPLLHEH CAEARGFSVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -86.99 (PValue = 8.761289e-01)
Components of the Score Function:
Profile Score...............................................: -25.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.21
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.10
Term 9 Volume Limitation [3..8]...........................: -1.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1690 (length 60 amino acids):
MTYVYRFVPV SRWYRLLTPK IILSDSIAGF IVGVMIVPTC LSWSSLAGLP FSCGLIAALV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -15.63 (PValue = 1.364838e-02)
Components of the Score Function:
Profile Score...............................................: -6.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.45
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.58
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2570 (length 60 amino acids):
MREARSPARV SAPMDATVAN SKETEASHTG EDAACERLYR NATKQAEQRE RGLQALREAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.50 (PValue = 3.117757e-01)
Components of the Score Function:
Profile Score...............................................: -7.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1710 (length 60 amino acids):
MSERGTKVTA SPSARCRGGY PAAGEVAAAE AGYAVAKAES LVAEAAELMA SAAPPRRKLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -72.11 (PValue = 6.729952e-01)
Components of the Score Function:
Profile Score...............................................: -9.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.10
Term 14 Hydrophobicity of Tail [26..end]...................: -2.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2490 (length 60 amino acids):
MDERKDKYEQ LLAKVDWHAP HPPKGYQYGA GRGAKGFITT AELTTGVNTT AKMTRDENDF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -95.20 (PValue = 9.343190e-01)
Components of the Score Function:
Profile Score...............................................: -6.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.74
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.52
Term 14 Hydrophobicity of Tail [26..end]...................: -5.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -76.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2380 (length 60 amino acids):
MEGYALGNGI QGADPPGGAG VWSSGAPTPL SFTPPLVSAV HLPCAPPAAV SSPTSNNGFG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.66 (PValue = 3.507863e-01)
Components of the Score Function:
Profile Score...............................................: -5.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.99
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2280 (length 60 amino acids):
MLRTTHVSWA STAKGYMNRV MVYAHRRRKA RYLAPKNAHV RSPLAHKMPE EYGNTWDPRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -85.91 (PValue = 8.659932e-01)
Components of the Score Function:
Profile Score...............................................: -14.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.61
Term 4 Volume Compensation (-1, 1, 2).....................: -4.68
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.30
Term 14 Hydrophobicity of Tail [26..end]...................: -4.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2270 (length 60 amino acids):
MWSFLNDVRE SVRQVVAPPP SRSSIASTTT TATSTTANTR EMGFEEAVDQ LTTGLLYLWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -28.96 (PValue = 5.140149e-02)
Components of the Score Function:
Profile Score...............................................: -7.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2170 (length 60 amino acids):
MNPTVPRGTE WGLVHCDFFH HARANTSRLL VSHRTTDTVG QMLMSLKDGL LTSAPSKKPH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -74.14 (PValue = 7.085136e-01)
Components of the Score Function:
Profile Score...............................................: -9.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -3.42
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.17
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -4.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2160 (length 60 amino acids):
MFSRTQDAGG ADSGVILPFR MGGKSTVVMS DYHICKYDAI LGVLVCIGDD ASVLVLGKEM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -44.86 (PValue = 1.812306e-01)
Components of the Score Function:
Profile Score...............................................: -14.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.98
Term 4 Volume Compensation (-1, 1, 2).....................: -4.02
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2090 (length 60 amino acids):
MSSITGAAYS SPEYTHCIRD SRFRHNVYEP EADTFLFLDA LDKDAELLRS IRPDRCVEVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -67.56 (PValue = 5.867788e-01)
Components of the Score Function:
Profile Score...............................................: -16.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.42
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1840 (length 60 amino acids):
MDTLTHLSHT LREAMSDIVP ESHPEHPFNL IPELCRKFYD LGWATGTGGG ISIKMGENYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -71.70 (PValue = 6.655907e-01)
Components of the Score Function:
Profile Score...............................................: -2.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.98
Term 14 Hydrophobicity of Tail [26..end]...................: -2.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1770 (length 60 amino acids):
MGTHVSKVKS VNMDAWAEST MLVAESIGNA RGRLLYEYNM PPSARVTNTT ETAVAERVIR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -42.49 (PValue = 1.533543e-01)
Components of the Score Function:
Profile Score...............................................: -10.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1730 (length 60 amino acids):
MVQGLSSAKA VLALLSEAEN LVVLFALKRL SSLMDTFWHE VSAKLPLIEE LAASEKLADE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -40.98 (PValue = 1.373135e-01)
Components of the Score Function:
Profile Score...............................................: -11.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.54
Term 4 Volume Compensation (-1, 1, 2).....................: -2.04
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1590 (length 60 amino acids):
MESLQMRWVE CPLLDAANLV LHSPSSSEDD DDDDPIDLLN RREGHCSAVV YPATPIDMSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -55.26 (PValue = 3.433113e-01)
Components of the Score Function:
Profile Score...............................................: 1.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1560 (length 60 amino acids):
MDIPLRLRLA YANYLGEVYC DRKPVRCDAQ PPSRHSPYTG KGAESDGRHW LSSLVASVGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -7.62 (PValue = 5.152201e-03)
Components of the Score Function:
Profile Score...............................................: -3.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1520 (length 60 amino acids):
MADNEVDVIL QNYFAAIAEK DSDALKLYED NKRMRRLVEQ TLKAREELEA QHCTTQLLVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -53.25 (PValue = 3.073571e-01)
Components of the Score Function:
Profile Score...............................................: -23.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.58
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1515 (length 60 amino acids):
MAPKAQPDRM AGGPSSSSKS TTDPMLQGAY EQDESNDLEG STEEIAAFEA RLQQQQQQHG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -84.14 (PValue = 8.477659e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.96
Term 14 Hydrophobicity of Tail [26..end]...................: -5.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1510 (length 60 amino acids):
MVSIPLLYSG VLGFTGVVAG AVGSHALKAK TAEERNAFII GSQYQLMHSI AALGAIGLSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -10.15 (PValue = 7.139274e-03)
Components of the Score Function:
Profile Score...............................................: -4.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.24
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1210 (length 60 amino acids):
MQYHVQLALA PSCAASDFDG GDGVSGTASS PSLVASPSST SAQANSSPAH HQQSDSGSGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -66.31 (PValue = 5.619498e-01)
Components of the Score Function:
Profile Score...............................................: -1.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1130 (length 60 amino acids):
MASSRNRSPS SPSTESSYES QQDQCQQQES YRTEHLETQA RSDSDMQKAA RQHRAGSSVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -65.22 (PValue = 5.399954e-01)
Components of the Score Function:
Profile Score...............................................: -6.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0835 (length 60 amino acids):
MNELEYFVLS THGKRCDIMR YMQQLRDLDE WIEYHLSHLR SIAAERVAYQ KAQARQKQSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -89.64 (PValue = 8.984022e-01)
Components of the Score Function:
Profile Score...............................................: -20.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.99
Term 14 Hydrophobicity of Tail [26..end]...................: -3.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0780 (length 60 amino acids):
MGYDMSIYIF GGLVTTGLFE VGGDVDFVGI LDVEPGFAEA GEILRRSSSE LRRLGLRSRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -57.39 (PValue = 3.833382e-01)
Components of the Score Function:
Profile Score...............................................: -21.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0710 (length 60 amino acids):
MSTMASELEQ AQAILASERR SLGLIHRPLR TTLLFLSYSI QGTVHYTEVA LSRPLFNTVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 22 had the best score.
Total Score.................................................: -42.89 (PValue = 1.578388e-01)
Components of the Score Function:
Profile Score...............................................: -5.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -28.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.56
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0575 (length 60 amino acids):
MSRTKETARA KRTITSKKSK KAPSAVSGVK MSHRRWRPGT CAIREIRKFQ KSTSLLIQCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.47 (PValue = 3.111189e-01)
Components of the Score Function:
Profile Score...............................................: -12.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0970 (length 60 amino acids):
MAVAYPSEED ESVLVGFTEF FTQQEGVHAL LRITEQDVQT VRSACSSVLA HLSSTSRLIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -19.90 (PValue = 2.156132e-02)
Components of the Score Function:
Profile Score...............................................: 5.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.08
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0930 (length 60 amino acids):
MGFRESKPKL SQTAEKPEKS QITPSDKARL QLKLQRDNVQ AAIRKYERVA LLEHEKAKEF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -103.10 (PValue = 9.664821e-01)
Components of the Score Function:
Profile Score...............................................: -26.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.50
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.72
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.00
Term 14 Hydrophobicity of Tail [26..end]...................: -4.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0880 (length 60 amino acids):
MHGFLVHGQA SRGLMSAEVK KGYTGCRSYL MSAEDLGKGG RLTHSEILIA NEAIIKQRRE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -88.37 (PValue = 8.882511e-01)
Components of the Score Function:
Profile Score...............................................: -16.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.49
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0790 (length 60 amino acids):
MVQRSALVRL ACLVAVLYSS CLSAPLSSTI AAAAPAAARD TAISSRHNTS VTAASPSPLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -37.98 (PValue = 1.093283e-01)
Components of the Score Function:
Profile Score...............................................: -0.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0710 (length 60 amino acids):
MFPIFFFLSS VTMQSRQYCR TPQPPPQQPW CSSAGAGVPK PDAYAAFTSS SSLLPSPALT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -29.95 (PValue = 5.612177e-02)
Components of the Score Function:
Profile Score...............................................: -11.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.40
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.18
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -14.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0690 (length 60 amino acids):
MSLALLPMVL RKDDSLVLAV YNEQAASLTE LNGEANRYTG DYRECEVAFN PARPTCFAHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -66.49 (PValue = 5.655321e-01)
Components of the Score Function:
Profile Score...............................................: -10.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.35
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.96
Term 14 Hydrophobicity of Tail [26..end]...................: -2.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0640 (length 60 amino acids):
MVPLLFHSSP LPSPLPPLDP ISLLPTDTDK DVLLRPHSRW LVRKDRTRIF LMQSARVALP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -54.33 (PValue = 3.264028e-01)
Components of the Score Function:
Profile Score...............................................: -4.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.79
Term 4 Volume Compensation (-1, 1, 2).....................: -4.81
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -3.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0490 (length 60 amino acids):
MKCCRVFVFV LLMLFTACAT CSILFPVFRK VVAGTDTTNT VYFWYRQSST PAKETPDVEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.68 (PValue = 3.327274e-01)
Components of the Score Function:
Profile Score...............................................: 2.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0460 (length 60 amino acids):
MVHSYGYKSG TRHLFAKKFR KHGVPSVSTI LTNIKVGDYV DVVADSAVRE GMPHKYYHGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -68.26 (PValue = 6.003786e-01)
Components of the Score Function:
Profile Score...............................................: -4.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.16
Term 14 Hydrophobicity of Tail [26..end]...................: -4.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0440 (length 60 amino acids):
MNVSFLFSLP CNLAEFKGAA KLLADAAALP LRECGAKGGV AVPGLFCGCD PEGRPLGSGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -62.45 (PValue = 4.839694e-01)
Components of the Score Function:
Profile Score...............................................: -4.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.48
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0400 (length 60 amino acids):
MAPERCFPHG FLRRLQRATF LFFSMLAALY ATTSLYYVVR ISVVEEPDLY HQIGSNVKGF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -79.95 (PValue = 7.970483e-01)
Components of the Score Function:
Profile Score...............................................: -20.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.44
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0390 (length 60 amino acids):
MGLLGLRKFI DSCGCTRLLP LPLSDAEAAE EVKRRLRVEG YYEITGEDAD ADSGALYTNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -69.18 (PValue = 6.183498e-01)
Components of the Score Function:
Profile Score...............................................: -11.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.99
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0260 (length 60 amino acids):
MKQGKSTMER LRDASHVSDL PTIIKLIMKR NIDIKKPDAH GRTSLHYACM NDNKVLISYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -35.74 (PValue = 9.149721e-02)
Components of the Score Function:
Profile Score...............................................: -9.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.18
Term 4 Volume Compensation (-1, 1, 2).....................: -2.86
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0220 (length 60 amino acids):
MEHALLQVVH LYPPKTLLRY DSAAHTEKLR HQPHLYAASS CEDCEIVATD EQVGAYTDLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -47.60 (PValue = 2.177942e-01)
Components of the Score Function:
Profile Score...............................................: -16.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0140 (length 60 amino acids):
MPKNMGKGGK SFKAGNSKGN MQNQKRDLTY ANPDEGEEYA QVKKALGNLR LELQLAGGST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -45.24 (PValue = 1.859802e-01)
Components of the Score Function:
Profile Score...............................................: -7.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0110 (length 60 amino acids):
MPEEVVLMMD LKGVLTSSPF PAARRLAENM MRCVFERASS HIIVKRIQER PVPFLAKKYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -68.13 (PValue = 5.978601e-01)
Components of the Score Function:
Profile Score...............................................: -11.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.17
Term 9 Volume Limitation [3..8]...........................: -2.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.00
Term 14 Hydrophobicity of Tail [26..end]...................: -1.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2630 (length 60 amino acids):
MLRRCLAQAS TALRCGSTAA LAAPFAPFGC GATRTAAVDA VACSRLASST AAYPTLRTSC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -41.74 (PValue = 1.452286e-01)
Components of the Score Function:
Profile Score...............................................: 0.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2490 (length 60 amino acids):
MRMRPFTAST AATPTAAGAA PASSMSSPAP LRKARESATG SAGSYFLGSS TFSVYEEMAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.56 (PValue = 3.676299e-01)
Components of the Score Function:
Profile Score...............................................: -0.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.22
Term 14 Hydrophobicity of Tail [26..end]...................: -2.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2470 (length 60 amino acids):
MGRTAEAIAP SKGHFRHHYS LSDEIGKGAY AVVFRCIHRE TKAVYAVKIV DKRKAGPKDI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -94.35 (PValue = 9.296983e-01)
Components of the Score Function:
Profile Score...............................................: -18.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.36
Term 4 Volume Compensation (-1, 1, 2).....................: -2.15
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2210 (length 60 amino acids):
MPPKVSKLPP QRRDTAHHLP DDDINLFFRV LRFLSAHPHL ATLDTATVRL DGADHSPSTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.14 (PValue = 6.366140e-01)
Components of the Score Function:
Profile Score...............................................: -13.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.09
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.05
Term 14 Hydrophobicity of Tail [26..end]...................: -3.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2240 (length 60 amino acids):
MEGRWPPTLV TSPVHVYTSE VARGSSHPCW SAIPPGQLNA YDTATQVELA FYYTAACLSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.86 (PValue = 4.120587e-01)
Components of the Score Function:
Profile Score...............................................: -12.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.74
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2440 (length 60 amino acids):
MRAPNAHPHS PCALYSLPLL LTASFLQLQR HQWDARDRDT HAQISVSLKP HNMVWNVRGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -72.07 (PValue = 6.722958e-01)
Components of the Score Function:
Profile Score...............................................: -10.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.90
Term 4 Volume Compensation (-1, 1, 2).....................: -1.22
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.98
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.47
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2430 (length 60 amino acids):
MMSEASTSVD GEEAMPLPER FQQLRHSLHG HWGTSAEADL LRAMQQLHTR LVARSAQTHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -65.77 (PValue = 5.511473e-01)
Components of the Score Function:
Profile Score...............................................: -15.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.67
Term 9 Volume Limitation [3..8]...........................: -0.76
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.51
Term 14 Hydrophobicity of Tail [26..end]...................: -3.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2350 (length 60 amino acids):
MPISSSLVAF ERVIIAEDSV SPSVAPALQK MLSLLPRHDA KVSYQLEQDV FHFFIENDIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -75.20 (PValue = 7.261573e-01)
Components of the Score Function:
Profile Score...............................................: -27.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2337 (length 60 amino acids):
MDTDLLLTLS SFCRVRMQAR PVFFTESRTF VDDVDTFIKY WQRSRSEQTA TLLAFLKVVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -27.21 (PValue = 4.387436e-02)
Components of the Score Function:
Profile Score...............................................: -1.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.58
Term 4 Volume Compensation (-1, 1, 2).....................: -4.64
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2130 (length 60 amino acids):
MVTSALTAVS SASGAGAGTA TTESMHMVKE ASLHNTWAAN FNNTETLRET VSTSNGAYTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -66.98 (PValue = 5.752381e-01)
Components of the Score Function:
Profile Score...............................................: -17.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1940 (length 60 amino acids):
MQVNSLLERM RKVRQEKAAA AAAAAATATA AAPLAVTNAT ATVPAANAAS RDAPVSSAAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -49.27 (PValue = 2.423764e-01)
Components of the Score Function:
Profile Score...............................................: -1.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.15
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.77
Term 14 Hydrophobicity of Tail [26..end]...................: -1.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1930 (length 60 amino acids):
MSAHNPKAVA AIPVAVIPPG IRRATLSMEA HERNHLAIGM GGEKYLVVHP TYSLAPHLYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -55.13 (PValue = 3.408924e-01)
Components of the Score Function:
Profile Score...............................................: -10.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.17
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1910 (length 60 amino acids):
MAEPITNENL QILLTKLMTD RFCSQESSDL DACIQNFVPQ HIDGSYVDQS LQRRGIRRCK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -78.80 (PValue = 7.812219e-01)
Components of the Score Function:
Profile Score...............................................: -17.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.16
Term 14 Hydrophobicity of Tail [26..end]...................: -3.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1840 (length 60 amino acids):
MGNRVSTAAA PFSLEDLEAL ARAPSLFDTL PNDAGNSAGS GASVLFRKEI IAEMERQYAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -85.96 (PValue = 8.664837e-01)
Components of the Score Function:
Profile Score...............................................: -11.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -1.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.68
Term 14 Hydrophobicity of Tail [26..end]...................: -5.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1805 (length 60 amino acids):
MAPIIHRNLT APELVQWALK LEKDTKLSAR GALCVLSYAK TGRSPRDKRV VDTDDVHENV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -81.03 (PValue = 8.112573e-01)
Components of the Score Function:
Profile Score...............................................: -31.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1740 (length 60 amino acids):
MLCVSVAKDG FAIVLTGLDT KRRAPPHQQR LSRNVCFHQT KAKEFVARFH QPCFLAWSHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -82.49 (PValue = 8.291810e-01)
Components of the Score Function:
Profile Score...............................................: -17.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.02
Term 14 Hydrophobicity of Tail [26..end]...................: -1.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1690 (length 60 amino acids):
MPRPYKKSKG DVGTAKYSRP CKFFLRGSCS NQRCPYLHVR NQTVKRSVSH KEVAAQQGNG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.97 (PValue = 5.750463e-01)
Components of the Score Function:
Profile Score...............................................: -11.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.29
Term 4 Volume Compensation (-1, 1, 2).....................: -3.72
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1620 (length 60 amino acids):
MSAPSSVPPH KMANLHKLQR AWTLWYDSPS TYNTENWEMS LVPIMTVHSV EEFFVMLRYM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -47.61 (PValue = 2.178659e-01)
Components of the Score Function:
Profile Score...............................................: -13.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1580 (length 60 amino acids):
MQSTHSPDTP MDRVSEGGAS FSDDAVMVNK VGEAQVKDMV DRPITPGTDK LVDATRCRPC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -71.82 (PValue = 6.676802e-01)
Components of the Score Function:
Profile Score...............................................: -18.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.88
Term 14 Hydrophobicity of Tail [26..end]...................: -4.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1540 (length 60 amino acids):
MPLIEAHLPA LRPYIRYPVV AATGSFDVGR LQQYATVCPA TYVIETITEA LAELTRRMKW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.27 (PValue = 3.435346e-01)
Components of the Score Function:
Profile Score...............................................: -4.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.05
Term 14 Hydrophobicity of Tail [26..end]...................: -3.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0830 (length 60 amino acids):
MPSANAHFSL SAGSAEETRR SIDSDCPLFN CFGVLSGGVI IDPIDGSFME FTDAAVYTPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -57.22 (PValue = 3.801359e-01)
Components of the Score Function:
Profile Score...............................................: -10.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.60
Term 9 Volume Limitation [3..8]...........................: -0.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: -0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0870 (length 60 amino acids):
MAYHQSQQMQ KEFRLPMVPG LSCGEEMMRR NYDRRQIHGV KLDCATAIAG VPADRTLTGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -55.46 (PValue = 3.469531e-01)
Components of the Score Function:
Profile Score...............................................: -9.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.10
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0840 (length 60 amino acids):
MLRIGRRSLA VVTAAAITDA ATKLNALLDI KHRTHPAPQG EIKRFLKTEV MPVLAGTELD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -58.62 (PValue = 4.071988e-01)
Components of the Score Function:
Profile Score...............................................: -18.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.58
Term 4 Volume Compensation (-1, 1, 2).....................: -3.37
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.97
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1370 (length 60 amino acids):
MSSSPADAHS SAFPDTTSVA AAFSRDDFFE CPRCHRHCKS RTWFLKHLEA CSKSASSSST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -79.47 (PValue = 7.905731e-01)
Components of the Score Function:
Profile Score...............................................: -4.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.71
Term 4 Volume Compensation (-1, 1, 2).....................: -4.81
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.35
Term 9 Volume Limitation [3..8]...........................: -5.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.67
Term 14 Hydrophobicity of Tail [26..end]...................: -2.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1295 (length 60 amino acids):
MTHATLNAVS GFLSTISSRS AQSQRTHRPC LPYVLDAMEH HFSEMDILFG GTVTPSALTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -26.48 (PValue = 4.104443e-02)
Components of the Score Function:
Profile Score...............................................: 4.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.61
Term 4 Volume Compensation (-1, 1, 2).....................: -5.95
Term 5 Volume Compensation (-1, 2)........................: -5.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.22
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1265 (length 60 amino acids):
MHFSAALMTL AASACLVFAY HCARLSGTSF VWLSSFVALL TFLARLPRTL RSKGAAVCDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -29.58 (PValue = 5.434593e-02)
Components of the Score Function:
Profile Score...............................................: 4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.35
Term 9 Volume Limitation [3..8]...........................: -1.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -1.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1070 (length 60 amino acids):
MRHSLYRLCQ CAKLSFTILV LAVSILSCVD VLARAQADDA APEILYVRGC RDGAAEARET
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -68.30 (PValue = 6.011943e-01)
Components of the Score Function:
Profile Score...............................................: -14.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.80
Term 9 Volume Limitation [3..8]...........................: -1.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.25
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0990 (length 60 amino acids):
MKRGREEDKE AEVGGSRVGP SDRRSAATST EHKPRRLLKG ADVGLPLHES VIEETCEVEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -62.03 (PValue = 4.753412e-01)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.87
Term 14 Hydrophobicity of Tail [26..end]...................: -2.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0950 (length 60 amino acids):
MDISRSSQHS ATKESATDSS FVETQRAGSS LYIGPEMVPE EANRRSAHPN KSMKTSREQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -91.07 (PValue = 9.089497e-01)
Components of the Score Function:
Profile Score...............................................: -4.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.79
Term 5 Volume Compensation (-1, 2)........................: -4.72
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.80
Term 14 Hydrophobicity of Tail [26..end]...................: -2.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -74.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0930 (length 60 amino acids):
MRRVLQSSLD RRSAMCGWTA AVTMTSASRA FMDLYNPTPE HAALRETVAK FSREVVDKHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -85.92 (PValue = 8.660732e-01)
Components of the Score Function:
Profile Score...............................................: -18.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.66
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.16
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0890 (length 60 amino acids):
MRLPCPTHIP LSSAETHFVG TVAAACPLGL VRVGVFSLRQ ERIDSDTCRG STSPPPPQSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -64.70 (PValue = 5.294387e-01)
Components of the Score Function:
Profile Score...............................................: -2.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.38
Term 14 Hydrophobicity of Tail [26..end]...................: -4.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0780 (length 60 amino acids):
MQPLSGTIFR RSGGLLPSAQ STSTLAHWRR RLSTLGHRFA AARAAHASAP ASSALSAHDF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -43.31 (PValue = 1.625726e-01)
Components of the Score Function:
Profile Score...............................................: 0.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0730 (length 60 amino acids):
MRFAVSCVAG AVGAWVWRRP SGQDAECYQG IQNAITFRNP QRQGRVFSQR YEPYQLGEII
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.68 (PValue = 4.085092e-01)
Components of the Score Function:
Profile Score...............................................: -21.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0610 (length 60 amino acids):
MVDRLPALTP SKGTETKSSL KKKTDDYALC QEYAAYIAQL RGLLEETTGQ PPAGVRTAEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -70.78 (PValue = 6.487161e-01)
Components of the Score Function:
Profile Score...............................................: -9.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.28
Term 4 Volume Compensation (-1, 1, 2).....................: -1.06
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2070 (length 60 amino acids):
MGIVRSRLHK RKITGGKTKI HRKRMKAELG RLPANTRLGA RRVSPVRARG GNFKIRALRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -53.44 (PValue = 3.107043e-01)
Components of the Score Function:
Profile Score...............................................: -8.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.31
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0470 (length 60 amino acids):
MLRAHSDLEK WGSVSPAVYS MPLVHRLGVA CTSAVFALVL LTQRYYLRRY GQTISAVHTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -60.62 (PValue = 4.469942e-01)
Components of the Score Function:
Profile Score...............................................: -18.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0300 (length 60 amino acids):
MMRRVPVLLS AAYLPEWIAA AKKELKNRDP STLTIHSING FDIKPLYLAD DVESHPALPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -68.23 (PValue = 5.998331e-01)
Components of the Score Function:
Profile Score...............................................: -15.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.71
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0270 (length 60 amino acids):
MHFVAGGAAR RVGRVSDDEY ETSSYEETES SDLLSDNSED YVPLTFEYIS SNPKRRAGAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -77.44 (PValue = 7.613182e-01)
Components of the Score Function:
Profile Score...............................................: -10.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.40
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.06
Term 14 Hydrophobicity of Tail [26..end]...................: -3.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0170 (length 60 amino acids):
MQDQWKIDVE SEDHRSRRDM TEKSITRYVK GEVERQVTSS STSSSVFVSD CTWIMGASAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -31.62 (PValue = 6.491635e-02)
Components of the Score Function:
Profile Score...............................................: 8.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0080 (length 60 amino acids):
MALLEWARQD ATMKSSLELY CGPASKDLMI MDIPANVAVD AYLWEGLLVA ESMLEADGTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -39.45 (PValue = 1.224124e-01)
Components of the Score Function:
Profile Score...............................................: -12.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -1.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0030 (length 60 amino acids):
MDSQGPFLVI PTKRGAVPTL TPAQANAILE PSERILATSV FEAMDFVKPC IEAGMQLSTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -67.73 (PValue = 5.900244e-01)
Components of the Score Function:
Profile Score...............................................: -19.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0010 (length 60 amino acids):
MESKVPLFLY FMVTNHPEVK QYTELLCHQV DQANRRLKDE NFGDVYQEFG KDAGLAIKLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -24.63 (PValue = 3.447252e-02)
Components of the Score Function:
Profile Score...............................................: -7.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.78
Term 4 Volume Compensation (-1, 1, 2).....................: -1.22
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.08
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2340 (length 60 amino acids):
MRAMFSPSLK RLAHKDFDAW GYHIQWPQNQ ILSPLTGKVD FVVEDIKFAY NAWCLLRLAM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -46.06 (PValue = 1.966798e-01)
Components of the Score Function:
Profile Score...............................................: -20.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.19
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2290 (length 60 amino acids):
MLEEDRQALR KMKADFEALA DRANSDFQGY NTFERRMNHY NTVYTAATRN TSKAAEYPGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -70.48 (PValue = 6.431071e-01)
Components of the Score Function:
Profile Score...............................................: -6.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1920 (length 60 amino acids):
MAESAVLTPL SARHTVSPRD RSALATGIST LSSPTEETIE VDGATTTPSL PPETRVNVTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.39 (PValue = 3.456773e-01)
Components of the Score Function:
Profile Score...............................................: -7.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.05
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1870 (length 60 amino acids):
MFYSGWKLLA PAFMNVGALS AELRHSNATG DAAAAYLTQD LLLGNDYTDG SASATPQRQH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -71.74 (PValue = 6.662893e-01)
Components of the Score Function:
Profile Score...............................................: -6.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.14
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.14
Term 14 Hydrophobicity of Tail [26..end]...................: -4.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1860 (length 60 amino acids):
MSDSHQLYEV AGRALPLPPK RTPPRYSTIT RSEEQEYRII SRANSPSRAE TLRDGKISPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -42.88 (PValue = 1.577107e-01)
Components of the Score Function:
Profile Score...............................................: -7.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.32
Term 4 Volume Compensation (-1, 1, 2).....................: -3.04
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.02
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1830 (length 60 amino acids):
MRLTPLRCSA AAFHFTSLLL QGSGGGYRFF EDMYPKHDPA PRYRYYEDQM QSPTVRSLEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -62.46 (PValue = 4.840304e-01)
Components of the Score Function:
Profile Score...............................................: -2.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.62
Term 4 Volume Compensation (-1, 1, 2).....................: -3.51
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1660 (length 60 amino acids):
MIALSRCCLR YVPRRPPAFG TVVGGGTRPR RTGAPAPRQR NQETAANTET VAEAEVVAAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -50.77 (PValue = 2.657953e-01)
Components of the Score Function:
Profile Score...............................................: -10.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1380 (length 60 amino acids):
MANLCLGEDF SEELTCAVCL DSWKDPVELM PCGHIFCKAC ATGLKECPVC RDPIRSTKVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -71.16 (PValue = 6.556104e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -1.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1550 (length 60 amino acids):
MYVMQQHAQE AEALNVHLLD DASQLTELGQ YLPAHIFGTV LPLVGDEIAS GAAELNAQVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -45.41 (PValue = 1.881571e-01)
Components of the Score Function:
Profile Score...............................................: -18.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -0.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1500 (length 60 amino acids):
MKIFKDVLTG SEVVCDNDCP FDVEGDIMYV VNGRYIDVGG EDYGISANVD EDAAEGATGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -70.37 (PValue = 6.408640e-01)
Components of the Score Function:
Profile Score...............................................: -15.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1490 (length 60 amino acids):
MKATPILSTD TAEQARLKLR HQHPEYTEEE QQQTDSKKTW AASEEAENED DYVDDDDEDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -111.94 (PValue = 9.861246e-01)
Components of the Score Function:
Profile Score...............................................: -15.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.79
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.73
Term 14 Hydrophobicity of Tail [26..end]...................: -5.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -80.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1430 (length 60 amino acids):
MKRSTTVLQP APANSQQVSE SVSRRRVATS SNRSISLDGA TSAPTAVKVN TNTAAGASPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -53.73 (PValue = 3.158078e-01)
Components of the Score Function:
Profile Score...............................................: -5.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1290 (length 60 amino acids):
MRLLPLSHSS SSAPIKQWPS GTRAVRSPQL RQMDSFYSNQ VRREEAHALR AQLSAFVDHH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -70.13 (PValue = 6.363604e-01)
Components of the Score Function:
Profile Score...............................................: -10.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.82
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1280 (length 60 amino acids):
MPACLAYYTG AMCFTIIHFL AWAFALVATP TAQFQTPGHG CYTMWGYRKF CGDVPYDLTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -68.60 (PValue = 6.071151e-01)
Components of the Score Function:
Profile Score...............................................: -17.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1130 (length 60 amino acids):
MYRELHQRNF KSVNEELDFL RKDFVASRKT LALLHEDKVR LERELMARVF DMNELQRKLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -88.10 (PValue = 8.859562e-01)
Components of the Score Function:
Profile Score...............................................: -26.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.23
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1125 (length 60 amino acids):
MSSYNDSDAA ERPMRLNRYI PSPILSPIPT SPSYYSHREG RDRSSNLQAG AGDAQQRRWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -85.78 (PValue = 8.646920e-01)
Components of the Score Function:
Profile Score...............................................: -3.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.52
Term 14 Hydrophobicity of Tail [26..end]...................: -5.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0950 (length 60 amino acids):
MANDGRIFEE LLDAEVAVNM EKLREASRMG IPPAYRGVVY RYLLGVAFTD KSSEMTMEEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -64.05 (PValue = 5.163268e-01)
Components of the Score Function:
Profile Score...............................................: -15.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.06
Term 14 Hydrophobicity of Tail [26..end]...................: -2.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0760 (length 60 amino acids):
MRKSAAGSGV ANGTFRPPTM SSEGTPAERK PRTHPLLPAT LAAAVPRFMT GWRALSNGSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -50.30 (PValue = 2.583282e-01)
Components of the Score Function:
Profile Score...............................................: -9.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0690 (length 60 amino acids):
MLRRSRVTRF IVPSSSSPEL PRFLTEREKP ILSTSGDLYA FVVEYDHRST IPRLGHGPVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -67.40 (PValue = 5.836261e-01)
Components of the Score Function:
Profile Score...............................................: -26.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.73
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0660 (length 60 amino acids):
MWQNALIEIS NRAGKKATHP VLNKLQKAVA TDLSISRVHS GKSTGSLFSV KADALRDSRN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -53.88 (PValue = 3.183235e-01)
Components of the Score Function:
Profile Score...............................................: -5.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0552 (length 60 amino acids):
MSTDLECGSE ALGRYTCKDA PRPSVCCTNG CCATSPYDLD MYTGLPLWLR IAVAILAGFV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -19.31 (PValue = 2.028423e-02)
Components of the Score Function:
Profile Score...............................................: -6.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.19
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0490 (length 60 amino acids):
MVRFSTPLVL ASPSLSTLHP LSLPRTHTRN DTCMQAHNST VAHSVSRAPF SLPPSTHPPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.78 (PValue = 3.530075e-01)
Components of the Score Function:
Profile Score...............................................: -4.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.90
Term 14 Hydrophobicity of Tail [26..end]...................: -4.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0430 (length 60 amino acids):
MCDRADDSRT RVQAIMCAMH EVGEGDAATK TPPPFCLFSL LLGSSGFRGV ATAGPTERLC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -42.88 (PValue = 1.576816e-01)
Components of the Score Function:
Profile Score...............................................: 0.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0370 (length 60 amino acids):
MLRHVCSSAV VAYSAGLAPV SCRRDGSTSY FSAVPRAPPD AIMGIAADFA KDMCPSKVNL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.71 (PValue = 3.516179e-01)
Components of the Score Function:
Profile Score...............................................: -2.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.87
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0340 (length 60 amino acids):
MARDERFSWC PVLLVIALYT GSVLLFTTSM LSTSTVMRTV ATEPCCDTKV PPADQVVLIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -29.23 (PValue = 5.265490e-02)
Components of the Score Function:
Profile Score...............................................: -4.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0980 (length 60 amino acids):
MSAMDEPSDD ELRTNALNDP GLFLDIEDDD EDVVLSAGLP TPAVLLQRQQ QQQQQNATSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -92.12 (PValue = 9.160937e-01)
Components of the Score Function:
Profile Score...............................................: -19.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.52
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0190 (length 60 amino acids):
MDYRSPFELR QQLLEEARAS QSTLPPKKWK SKTKGSSGGN SDSCAAPLPR QCTVGKDGSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.75 (PValue = 3.712725e-01)
Components of the Score Function:
Profile Score...............................................: 3.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0100 (length 60 amino acids):
MSGECVYDLV SASDSLGAGG NVVNVKPAAT AKKSRRAPPP TASTFGIHGT SAVVANAGGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -46.85 (PValue = 2.073166e-01)
Components of the Score Function:
Profile Score...............................................: -3.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1210 (length 60 amino acids):
MSHPYATNEP LHGAGDDAEH AVSNVVSPLS GAAPPVAAMT PSPEEHADGS DNAHPAASSC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.55 (PValue = 3.304540e-01)
Components of the Score Function:
Profile Score...............................................: -1.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.19
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1150 (length 60 amino acids):
MRHLLREVKL PFMDVHLIET YLFHLAQGTP AKESIGNEST SNVPLLGDRA SPKAGICREV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.43 (PValue = 3.464881e-01)
Components of the Score Function:
Profile Score...............................................: -4.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1130 (length 60 amino acids):
MSAASKSIDA MLKPLLVGGR WMSNRFVMAP LTRCRADDNH VPTAAMVKHY SDRASMGLIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -30.59 (PValue = 5.938984e-02)
Components of the Score Function:
Profile Score...............................................: 0.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -19.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0995 (length 60 amino acids):
MCACVRVCAY IYIYIAISRY VSLSLYVQIY RRVGMHVLSA HLYSLGHVCV CVYICMCVYP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -48.79 (PValue = 2.350154e-01)
Components of the Score Function:
Profile Score...............................................: -10.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.28
Term 4 Volume Compensation (-1, 1, 2).....................: -1.71
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.19
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1830 (length 60 amino acids):
MPFAAQPLPY PHDALASKGM SKEQVTFHHE KHHKGYAVKL TAAAESNSAL ASKSLVDIIK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -31.65 (PValue = 6.506004e-02)
Components of the Score Function:
Profile Score...............................................: -5.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1800 (length 60 amino acids):
MRGNLYSRGF DPMKSRSERR KEKQAKLSKT KRVIRLKRRL GRIAARKFAG QEDSHMTALM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.03 (PValue = 5.960104e-01)
Components of the Score Function:
Profile Score...............................................: -15.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1760 (length 60 amino acids):
MRVGAAAISA IAASPFPVDG ATKAAKSSPA FPMRALVVAG THDSDAVEGN NDDEAIFELF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.82 (PValue = 2.356013e-01)
Components of the Score Function:
Profile Score...............................................: -8.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1520 (length 60 amino acids):
MDALHMFRYR RPPKKEIYAK LLALCAFGVF CAVVGFNVAH LPLPSAKRGV LDVSIPAADH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -41.84 (PValue = 1.462602e-01)
Components of the Score Function:
Profile Score...............................................: -6.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -3.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.40
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1450 (length 60 amino acids):
MKWLGRLMRR KKRTPLPPKP YVDTASTGRH MLDARLYGSA DLAQIDPEKP HWQDMRFESR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -105.99 (PValue = 9.743830e-01)
Components of the Score Function:
Profile Score...............................................: -22.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.67
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.85
Term 14 Hydrophobicity of Tail [26..end]...................: -5.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -67.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1390 (length 60 amino acids):
MIIGAPAKRW ATESVPELLA SPQTDLAAVL LSDAVADYLH SIDSVGAARV NRRGGDGSEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -75.05 (PValue = 7.238235e-01)
Components of the Score Function:
Profile Score...............................................: -16.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.23
Term 14 Hydrophobicity of Tail [26..end]...................: -3.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1380 (length 60 amino acids):
MDTSARRCFV EVYTDGCDEP RLLQLEPTVK FHNVLRRFDK DGDLYWGDHR IDPQTTPVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -49.35 (PValue = 2.434873e-01)
Components of the Score Function:
Profile Score...............................................: -8.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1260 (length 60 amino acids):
MSTFALEPLP LFQPITAASE QRITQVLDTL RAQHKSAFPL LFQRALDRGT ADLPTPQNDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -60.34 (PValue = 4.413474e-01)
Components of the Score Function:
Profile Score...............................................: -4.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1140 (length 60 amino acids):
MDFEAVARAT HAAMARERGA GHLFQQREQE LEKQAGTSAV PQQSALASGP ALASSSERFC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -58.91 (PValue = 4.130188e-01)
Components of the Score Function:
Profile Score...............................................: 2.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0960 (length 60 amino acids):
MSALPHIQKE FRNLTKDPPA GFRVELKDNS FFTWIVWFTG PEGTPYAGGQ YKASLTFPKE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -70.47 (PValue = 6.429233e-01)
Components of the Score Function:
Profile Score...............................................: -6.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0870 (length 60 amino acids):
MEQALIEAAI LKALSSAERV LSTDVAESIR VDHQDIVGAG KSLEADNYIR SEMEQRMVLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -82.33 (PValue = 8.272856e-01)
Components of the Score Function:
Profile Score...............................................: -26.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.74
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0840 (length 60 amino acids):
MRGRGGRGGR GGSFGGFSQQ PTNTISIRVS EIQQPVTEDV MRRVFQSVGV SCNSIQITPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -61.92 (PValue = 4.732384e-01)
Components of the Score Function:
Profile Score...............................................: -1.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0700 (length 60 amino acids):
MSGAGNLRSN RRREMDYMRL CNSTRKVYPS DTVAEFWVEF KGPEGTPYED GTWMLHVQLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -47.47 (PValue = 2.159397e-01)
Components of the Score Function:
Profile Score...............................................: -16.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1130 (length 60 amino acids):
MTSILDPRQP IEPLQRAMMV AKDSTLATAM LNVFGGYVMG FGFSLFGSMI SAETSTQAMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -57.87 (PValue = 3.927057e-01)
Components of the Score Function:
Profile Score...............................................: -9.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.10
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1190 (length 60 amino acids):
MRSREASRAA AEPAPTPSSE PLWQRPADAV AVPASVQRFY THFMTLLTQQ GRCGPATIAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -63.98 (PValue = 5.149900e-01)
Components of the Score Function:
Profile Score...............................................: -18.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1150 (length 60 amino acids):
MPPLHSRATR QLVKERSKIE GPRSLHRGIH YQENEAHASS YMQNAKKKRA DHRDLLVHHQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.14 (PValue = 6.365519e-01)
Components of the Score Function:
Profile Score...............................................: -14.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.14
Term 4 Volume Compensation (-1, 1, 2).....................: -1.56
Term 5 Volume Compensation (-1, 2)........................: -2.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0580 (length 60 amino acids):
MPEMSDVWLL GVVLTGETTF WLCEPTHLKP LAEDWKAINC RWLYPVLENL SDFADVSGFE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -63.64 (PValue = 5.080955e-01)
Components of the Score Function:
Profile Score...............................................: -25.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0530 (length 60 amino acids):
MLVRSITKCV VPLIKATSYT SSYIVEHPPT PVRLTSMLPL HNKSMPTPLL DPERLQEISC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -64.62 (PValue = 5.278268e-01)
Components of the Score Function:
Profile Score...............................................: -7.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.48
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.60
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0480 (length 60 amino acids):
MNASGATASE GKNPPRDART VSFHPESTFH EQHNAASQRF SHTSEPGWES RESNSGYAAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -69.99 (PValue = 6.338218e-01)
Components of the Score Function:
Profile Score...............................................: -10.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.85
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0290 (length 60 amino acids):
MRLCTRDVNA QGRLSKSPCV PLSQIDVGFL CTSMEAWPPL LPSFSREAVE AMNRFVQGFI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -56.95 (PValue = 3.749089e-01)
Components of the Score Function:
Profile Score...............................................: -11.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.20
Term 4 Volume Compensation (-1, 1, 2).....................: -1.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0250 (length 60 amino acids):
MPPQIPTTRA DSRGMSPRTP RGAHSTEAAR PSARSHLKNA SVANPLLPLH SLHPVVRPSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -37.99 (PValue = 1.093849e-01)
Components of the Score Function:
Profile Score...............................................: -4.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0200 (length 60 amino acids):
MPSTSVHHML NELVDLSHSI AALLEQGQVL SLTAAPSAAD RQQEASLKTQ EIERIVRRVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -45.44 (PValue = 1.885214e-01)
Components of the Score Function:
Profile Score...............................................: -13.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0165 (length 60 amino acids):
MLRTTRFARC ASAAAGKKFS FSEKMQRLQA DPEHALSGPE YAFMRDRLAE YRKLQQTYAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -77.67 (PValue = 7.648947e-01)
Components of the Score Function:
Profile Score...............................................: -23.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0100 (length 60 amino acids):
MADGPPRFFT KPEEYVGVNN HRRTLFLDMD ETLVHCYFEK PTFFIDTNED FFQFTLEDDP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -92.05 (PValue = 9.156824e-01)
Components of the Score Function:
Profile Score...............................................: -11.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -3.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0060 (length 60 amino acids):
MMTHPKLLPS QELVLHQVSV DSFSPATASV LKFPASPLLP RSPFSNTCAG KTSETTVPCS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -48.10 (PValue = 2.250167e-01)
Components of the Score Function:
Profile Score...............................................: 7.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.06
Term 14 Hydrophobicity of Tail [26..end]...................: -2.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.72
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1390 (length 60 amino acids):
MSFFKRTISL DSIGVVYDEL HPRSRDGAAA HGAEREQSER RVFSPVLTPS LNVARIDDVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -46.00 (PValue = 1.959247e-01)
Components of the Score Function:
Profile Score...............................................: -14.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1230 (length 60 amino acids):
MSDAPHRQSS TPASSFLPPE PLCVADILSE LLPFLLAAPQ PRDGCPPSSS AQEPAESPVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -27.99 (PValue = 4.712377e-02)
Components of the Score Function:
Profile Score...............................................: 13.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1200 (length 60 amino acids):
MRCAEQQPAP HGTESPSASP KVTEDSAEAS SNTDALRRGR QQRTSSPCPT PTSKAQMTRM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -67.52 (PValue = 5.859405e-01)
Components of the Score Function:
Profile Score...............................................: -10.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.47
Term 14 Hydrophobicity of Tail [26..end]...................: -4.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1020 (length 60 amino acids):
MSMLPRSNSA TVAPQPASGG GAPAFSVSMS SSRWPQRGAS PPLTTSSQVP PSAESSSANS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -62.93 (PValue = 4.935916e-01)
Components of the Score Function:
Profile Score...............................................: -2.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.32
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0860 (length 60 amino acids):
MNSYVKRYVG TDQRVTQLVG FKRASERRLV VVCALSALGI YCAVYLYEEK ERNRRHASIK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -111.08 (PValue = 9.847433e-01)
Components of the Score Function:
Profile Score...............................................: -34.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.42
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.72
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.74
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1010 (length 60 amino acids):
MFQVSSSGGM RKLPGKHNSP IAVSVPGGLT RVASARQGKR RASRVFYVGC LSAVALMLVC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -19.45 (PValue = 2.059199e-02)
Components of the Score Function:
Profile Score...............................................: -4.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.92
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0105 (length 60 amino acids):
MSALLSFPSR SSAAPLAMRG CRRTFTASAA AAISPSASSS TSANGRLLVG GAKAMERSGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -40.95 (PValue = 1.370292e-01)
Components of the Score Function:
Profile Score...............................................: -1.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.78
Term 14 Hydrophobicity of Tail [26..end]...................: -3.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0070 (length 60 amino acids):
MPSEILQRLY EGLGFPRDLV TQYLTDLAQA AEVPTFSDVT ELLDEAGPFQ SFLVRSCFEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -54.53 (PValue = 3.300088e-01)
Components of the Score Function:
Profile Score...............................................: -9.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0010 (length 60 amino acids):
MLYSLFSPFP SSVVCTCCWL ISPIVFVTRS KLKCSIVSSI QLRCLPDLFL PRHIFVLHRK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -61.12 (PValue = 4.569881e-01)
Components of the Score Function:
Profile Score...............................................: -9.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.14
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0730 (length 60 amino acids):
MDASSTLPSA SVAASSLVSS PFVPCIEDSA HTRRVGRHPV LFQRTLDAVS YRYLTASSRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -50.47 (PValue = 2.609268e-01)
Components of the Score Function:
Profile Score...............................................: -6.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0690 (length 60 amino acids):
MSSKLINAVC TMATRECVAE LALFHRALRM LHPTLPLYLG CSSEIRDAAE AATDATSQLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -49.04 (PValue = 2.387880e-01)
Components of the Score Function:
Profile Score...............................................: -6.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0580 (length 60 amino acids):
MAQRARRLSM AVLMAFVVCV LLFAGGVTRA ALTAAQNSIT AEFLRSFAVS IPGLASVWTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -43.53 (PValue = 1.651377e-01)
Components of the Score Function:
Profile Score...............................................: -6.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.67
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0540 (length 60 amino acids):
MTSPTHSHAS TTGSRRHHTP LLQERSNSLT RRQEMLKLQN GPPSTLHYPA SPQQEEADAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -91.26 (PValue = 9.102875e-01)
Components of the Score Function:
Profile Score...............................................: -11.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.66
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.70
Term 14 Hydrophobicity of Tail [26..end]...................: -4.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -68.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0440 (length 60 amino acids):
MDESMWFIQT KAMVLQSWYD DAEIEDDGVD DVLMEGEQAI VSTVHRPNTS LRAARQGTAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -69.20 (PValue = 6.187515e-01)
Components of the Score Function:
Profile Score...............................................: -1.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0320 (length 60 amino acids):
MVVTRHHTPT QQEPRASMLT GASAYGGGVG ALSGNHEGHG ASAQEMVVGS PNSQEVAELP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -52.59 (PValue = 2.958874e-01)
Components of the Score Function:
Profile Score...............................................: -8.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0174 (length 60 amino acids):
MSAYVLSTPL EARVAKCASL RAANAVPVVV EEAQARGGKA YFSALARETT VAQLVAAVRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.44 (PValue = 6.390272e-02)
Components of the Score Function:
Profile Score...............................................: -11.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1640 (length 60 amino acids):
MHDFLEEFEG FAKVLVESLW REGGLPPTAR PSSATTTCAR YGNVLVHVWP DGKLGMWMQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -45.30 (PValue = 1.867912e-01)
Components of the Score Function:
Profile Score...............................................: 2.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1480 (length 60 amino acids):
MCEICGSLCC CRPLHRPPSP LLLVLLSHLS LSLFLTSGSG AMGVCCSDCK RSDAEKNTKL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -74.04 (PValue = 7.069114e-01)
Components of the Score Function:
Profile Score...............................................: -14.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1427 (length 60 amino acids):
MSIAADMAYP AEAAAAADVS EVSDITLEAA RKQKIHNLKL KTACLSNEEF IQDLHVSDWS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -70.10 (PValue = 6.359128e-01)
Components of the Score Function:
Profile Score...............................................: -31.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1390 (length 60 amino acids):
MEYAQKSARL PRSAEEKEQW KRVIVILEHC PLQTIQTDRG FELLSDRHRS YHARHNQDPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -94.54 (PValue = 9.307727e-01)
Components of the Score Function:
Profile Score...............................................: -10.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.78
Term 14 Hydrophobicity of Tail [26..end]...................: -3.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1180 (length 60 amino acids):
MTVISAGVVN KQGRIVLARQ FTDISRVRIE GLLSAFPRLL ESSMSKQVTY IDAGTVRYVY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -50.17 (PValue = 2.562979e-01)
Components of the Score Function:
Profile Score...............................................: -3.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -1.35
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1110 (length 60 amino acids):
MELSRLLHRY HSGSSTVSAP ATASSNELRG TRREEGLPPP PAAAAAAAAG NSTVAKAQAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.44 (PValue = 1.886121e-01)
Components of the Score Function:
Profile Score...............................................: -4.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.78
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1100 (length 60 amino acids):
MTRAMNNITA WEKRREEYQQ WRRENLKGST YYRLSRPLDA LGGAKTEAEE NGVLPCLYNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -32.76 (PValue = 7.156212e-02)
Components of the Score Function:
Profile Score...............................................: -7.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1070 (length 60 amino acids):
MALSSQWSQA VVVRATPKGE IIVPQQPNNG TARAMAAAGN PIIVRARTAA NFGEGVTRNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -60.03 (PValue = 4.352361e-01)
Components of the Score Function:
Profile Score...............................................: -3.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.82
Term 14 Hydrophobicity of Tail [26..end]...................: -2.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1770 (length 60 amino acids):
MVYCPGGYSE HQDVPPEAHW CVFKQDRKYV PINFSGPPAA VSIRELCRSK PLEVALITAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -29.88 (PValue = 5.579086e-02)
Components of the Score Function:
Profile Score...............................................: -7.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.55
Term 4 Volume Compensation (-1, 1, 2).....................: -0.77
Term 5 Volume Compensation (-1, 2)........................: -2.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.58
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2490 (length 60 amino acids):
MALIECAESL SSSTKAKLQD AGILYVSEVV SLLSSTGYRA GDEGDSKPAS ALRHLSTALK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -30.21 (PValue = 5.744691e-02)
Components of the Score Function:
Profile Score...............................................: -4.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.19
Term 14 Hydrophobicity of Tail [26..end]...................: -0.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2400 (length 60 amino acids):
MGSHSKKSGR GGGGAHARQA RQRQQGQLKV LKKDLGVPDL KDVAQRLTQT AQRRTHSVLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.32 (PValue = 4.813334e-01)
Components of the Score Function:
Profile Score...............................................: -9.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2380 (length 60 amino acids):
MGQDQSRAKA CQLGQAETGG TDRSVSAGSA SAAPWEAPVS LAGVEGFQVV RLLPDSPAHK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -28.01 (PValue = 4.721448e-02)
Components of the Score Function:
Profile Score...............................................: 0.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.49
Term 14 Hydrophobicity of Tail [26..end]...................: -2.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2300 (length 60 amino acids):
MRVLVCGGVG YIGTHFVREL LRYSPHDVII ADSLEATHGS DVHVDTEKNY AARNPGANLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -67.64 (PValue = 5.882834e-01)
Components of the Score Function:
Profile Score...............................................: -17.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -0.86
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2290 (length 60 amino acids):
MDEDKRLATP PDARGDSPSS SNARLHLWSS FDSDEVPLTV EPTPLGARTG NGGQNVRPTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -66.30 (PValue = 5.617688e-01)
Components of the Score Function:
Profile Score...............................................: -14.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.05
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2240 (length 60 amino acids):
MNTRRKMIQA KPDVPSTHWH LMSEDFYPLF EADKRQHVEY WYNMAATGVQ RDIFRRICNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -58.40 (PValue = 4.030207e-01)
Components of the Score Function:
Profile Score...............................................: -7.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.95
Term 4 Volume Compensation (-1, 1, 2).....................: -3.36
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2230 (length 60 amino acids):
MRDGAENDSL SFAEAIVSAM DAQPVVPPAL LRNLQEPPFI WNRHPSHGIV LCLLQHRGIY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -67.04 (PValue = 5.764215e-01)
Components of the Score Function:
Profile Score...............................................: -26.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.75
Term 4 Volume Compensation (-1, 1, 2).....................: -2.23
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2190 (length 60 amino acids):
MRTRRCSRSQ SSQHVDSENN FYTATREDAA PASTALKRGD PAFAVPSTKT HVNAALLVEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -22.30 (PValue = 2.748848e-02)
Components of the Score Function:
Profile Score...............................................: -8.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2170 (length 60 amino acids):
MGAFALCVES AARDIRSLLT LHRVHPQVHS DIQRILGSLL RKNYENMTAP VPMDLIDPPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -69.40 (PValue = 6.225016e-01)
Components of the Score Function:
Profile Score...............................................: -7.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.23
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2050 (length 60 amino acids):
MTSVPSSATG VAEQQAMPSA DTIQQLQEAF CFVRHEREDV RKMAIRGIAE HSKENRDLWF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -82.75 (PValue = 8.322399e-01)
Components of the Score Function:
Profile Score...............................................: -20.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.19
Term 14 Hydrophobicity of Tail [26..end]...................: -3.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1810 (length 60 amino acids):
MSRQLLQRCS KKHLVIHMDI NKTIIQVDQA GGRTMDDVLN SNVAANTFGL VDPTDNKWRP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -85.56 (PValue = 8.624828e-01)
Components of the Score Function:
Profile Score...............................................: -16.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.53
Term 14 Hydrophobicity of Tail [26..end]...................: -5.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1650 (length 60 amino acids):
MAFQFPCGAE FLFVTQYLLQ FDDTVKFKLR REGRRTVLQV STVNIPPFSY TTVDFADESE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -80.61 (PValue = 8.057976e-01)
Components of the Score Function:
Profile Score...............................................: -19.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.17
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1630 (length 60 amino acids):
MHSEALVISY FLRSCSLKVS LPPKMLRRTF LSAERRIPFY PINSNNPIVF FDISIGSQPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -61.78 (PValue = 4.704213e-01)
Components of the Score Function:
Profile Score...............................................: -12.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.91
Term 5 Volume Compensation (-1, 2)........................: -1.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1575 (length 60 amino acids):
MQCRALCRRL LGFPKRGGLW RSVRSGKVAD GMRTSNPQCS ARHATTSSLT FNSAAASFTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -36.88 (PValue = 1.002765e-01)
Components of the Score Function:
Profile Score...............................................: -1.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1560 (length 60 amino acids):
MTNEQTTTFL VYVTLAVFNF ASSIIQGVAG IGDAILIQVL WLLACNLSDD FNRTPLGDSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -49.53 (PValue = 2.462322e-01)
Components of the Score Function:
Profile Score...............................................: -11.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.71
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1540 (length 60 amino acids):
MHLLYQKNPN NAPAQKILAA AAYAGVEITA EPCDENKTST DADFLNFCDP CGEYPVLELG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -46.15 (PValue = 1.978363e-01)
Components of the Score Function:
Profile Score...............................................: -14.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1510 (length 60 amino acids):
MRDVVTLFIE ASVAKGEWQA ALSALKLPLA SQSSSSSSTT TSAGSSFAEE VASNLFRLSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -32.34 (PValue = 6.903402e-02)
Components of the Score Function:
Profile Score...............................................: 6.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1470 (length 60 amino acids):
MTVNNSNNNN NGERLGSGTA RLFVGQLNFD ATEHDLRQIF SFYGHVIHTN VLRDADGKST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -57.67 (PValue = 3.887474e-01)
Components of the Score Function:
Profile Score...............................................: -5.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.63
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.81
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1410 (length 60 amino acids):
MHIGLAAAVP SPTTAPQWLQ DIENQLLIRN AIELKPSQSI FDSYTTLHVS VLHLQTVEDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -56.22 (PValue = 3.612536e-01)
Components of the Score Function:
Profile Score...............................................: -14.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.11
Term 14 Hydrophobicity of Tail [26..end]...................: -2.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1370 (length 60 amino acids):
MSIIYVDELA IRLPSDVRNT FNPLCAFGSS NNSSANTHNN NRCSAPVMGL REVQSGHVLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -25.36 (PValue = 3.694724e-02)
Components of the Score Function:
Profile Score...............................................: 1.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.07
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1290 (length 60 amino acids):
MPLPQPLRGR REEDETSSDN LSVASGGSCT FIPFAMVEPT TTDKSIRAPI LNSANRSCVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -65.39 (PValue = 5.433256e-01)
Components of the Score Function:
Profile Score...............................................: -5.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1280 (length 60 amino acids):
MSMTQNIVRR IFGDRKLPES LSNEEYDKYM QDNFPKWMKE FEDGGFLEKT KLPPIKSEEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -87.78 (PValue = 8.831852e-01)
Components of the Score Function:
Profile Score...............................................: -13.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1270 (length 60 amino acids):
MQIAPRTSAP VVHRFGLLRQ APLIAIRQHT SLWRFAASTA SVGTLLLSHS SSGGGSAVAC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -46.17 (PValue = 1.980955e-01)
Components of the Score Function:
Profile Score...............................................: -8.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.85
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1050 (length 60 amino acids):
MIPRNVPYEH SPPPRDNIVT VVMPGVISCR SMLSRYTGGD PLTVLCNWSD VNPTDPLYIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -52.58 (PValue = 2.957478e-01)
Components of the Score Function:
Profile Score...............................................: -7.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.73
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1280 (length 60 amino acids):
MRDAAATERE RLPSPADGDV DSLYEDGTEA ETAKQRSTVS TTTLLLALPW LGCTLFLVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -14.26 (PValue = 1.169353e-02)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.09
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1260 (length 60 amino acids):
MSQQLSFHDV SNDAIQHMQA SEALQKHLEN AQLAHRVCVA KALKANEPPV EKCALTWGEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -68.51 (PValue = 6.052669e-01)
Components of the Score Function:
Profile Score...............................................: -17.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.68
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1228 (length 60 amino acids):
MRDAAATERE RLPSPADGDV DSLYEDGTEA ETAKQRSTVS TTTLLLALPW LGCTLFLVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -14.26 (PValue = 1.169353e-02)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.09
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0343 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0950 (length 60 amino acids):
MRAFQVPPLG ADDQLLKAAS SERPGSGTAD GVVAPLKTHR SANELSAIVA DLHRTSHSAH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -50.58 (PValue = 2.627847e-01)
Components of the Score Function:
Profile Score...............................................: -13.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -4.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0870 (length 60 amino acids):
MGNPFEDLRP ALRSEEDEIR KGVFSQALRN LQQASLEERR RWCKAIREAT TRGGAKTKKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -89.67 (PValue = 8.986813e-01)
Components of the Score Function:
Profile Score...............................................: -18.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.04
Term 4 Volume Compensation (-1, 1, 2).....................: -1.52
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.33
Term 14 Hydrophobicity of Tail [26..end]...................: -3.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0840 (length 60 amino acids):
MWLRCSCRLF FHIPPPSLAA PARRVAPRTL RSHGRSQGSE PANAKVATSN PRTPDSFDSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -71.32 (PValue = 6.585805e-01)
Components of the Score Function:
Profile Score...............................................: -15.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.31
Term 14 Hydrophobicity of Tail [26..end]...................: -3.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0808 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0796 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0750 (length 60 amino acids):
MWMRMHPVER WTLLVDLGRR GAYLIEKPAQ LSPSAAREVA DKSTPISSDN RGSASVLGSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -42.54 (PValue = 1.538338e-01)
Components of the Score Function:
Profile Score...............................................: -11.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.06
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.23
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0720 (length 60 amino acids):
MAATKSAVSA AKRKAAKKVS RKSPEYTTLR KSCAPGAIAI ILAGRFRGRR AVILKQLPHN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -50.25 (PValue = 2.574815e-01)
Components of the Score Function:
Profile Score...............................................: -12.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.23
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0560 (length 60 amino acids):
MIAVETSLTA EDLPNSLEDL RLAIELSVPH GRTHGGYSGA DAGSWRNSVP TNVQQVWKKH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -78.10 (PValue = 7.711425e-01)
Components of the Score Function:
Profile Score...............................................: -11.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0550 (length 60 amino acids):
MTAVDVATLM EDDISVCLGG FTKELVYQQL LHCSEEGSLL RLLTVELVAN DGRTLVLAAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -35.24 (PValue = 8.787794e-02)
Components of the Score Function:
Profile Score...............................................: -8.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -8.56
Term 9 Volume Limitation [3..8]...........................: -1.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0510 (length 60 amino acids):
MPSAPLGRGP PHPFSPFNDE ADDDAHEESW RLYGSTVALA DCRVSTLLPS PPPQLTRSAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.63 (PValue = 2.327212e-01)
Components of the Score Function:
Profile Score...............................................: -4.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0380 (length 60 amino acids):
MIRYSKQQLL SLRPAAIEHV MRGRVVDHPP FLKIPESFAP LLSLPFAMEY VNVDAAMQLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -57.90 (PValue = 3.932586e-01)
Components of the Score Function:
Profile Score...............................................: -10.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0350 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0333 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0260 (length 60 amino acids):
MLRRSFAPLL TRASAVCLQG WGKTGSGSGW GSAGDSTSAG GWGSAGDSTS AGGWGSAGDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -41.64 (PValue = 1.441688e-01)
Components of the Score Function:
Profile Score...............................................: 2.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0020 (length 60 amino acids):
MGEVLVTATT ISGDTVALDT SAENVYGFQP GQIVHFTKSL RNGKVALIRG ISEGLLWFAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -41.77 (PValue = 1.454841e-01)
Components of the Score Function:
Profile Score...............................................: -8.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.14
Term 4 Volume Compensation (-1, 1, 2).....................: -2.09
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.40
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0010 (length 60 amino acids):
MRRCTVARYY WSRYRIPSQM PKFDGPAPVA APQNMNSTKT NEFIDPIDDK FPVTIRGNLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -54.65 (PValue = 3.322817e-01)
Components of the Score Function:
Profile Score...............................................: -15.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.92
Term 4 Volume Compensation (-1, 1, 2).....................: -3.33
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1130 (length 60 amino acids):
MSVSPLCDQL KRIEKAYFYQ PGKMTEVHAM SGTVSPHIEK RDYSRPFCLV SGNGNRPLAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -62.56 (PValue = 4.860232e-01)
Components of the Score Function:
Profile Score...............................................: -8.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1100 (length 60 amino acids):
MRRLTAPALS TPCVRSICGA APVMYFPPVP FASVSKEEQI KKNTKIAIEM IRRYKGEAPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -74.20 (PValue = 7.095768e-01)
Components of the Score Function:
Profile Score...............................................: -18.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1060 (length 60 amino acids):
MATSRAALCA VAVVCVVLAA ACAPARAIYV GTPAAALFEE FKRTYQRAYG TLTEEQQRLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.01 (PValue = 4.749161e-01)
Components of the Score Function:
Profile Score...............................................: -10.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.44
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0920 (length 60 amino acids):
MFSRGAAATA MAKVSRLVSP RLRIIHRDYL TRRGGRTHQR CSAVAVDYTP TYFATYKSDP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.67 (PValue = 4.480779e-01)
Components of the Score Function:
Profile Score...............................................: -8.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.63
Term 14 Hydrophobicity of Tail [26..end]...................: -3.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0760 (length 60 amino acids):
MACKLGVAIY VVLQLIAFVA VMVGTGVDMF YNKPEHSSGA RVCITLWGLK TDCRKPKITD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -74.51 (PValue = 7.147348e-01)
Components of the Score Function:
Profile Score...............................................: -8.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.95
Term 9 Volume Limitation [3..8]...........................: -0.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0720 (length 60 amino acids):
MACKLGVAIY VVLQLIAFVA VMVGTGVDMF YNKPEHSSGA RVCITLWGLK TDCRKPKITD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -74.51 (PValue = 7.147348e-01)
Components of the Score Function:
Profile Score...............................................: -8.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.95
Term 9 Volume Limitation [3..8]...........................: -0.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0560 (length 60 amino acids):
MQPRRMAGHF NPTPQANSLA ATHYAHTPEL RHMADGAAMS LSGQRIPLLK PTLSKWSRQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -32.09 (PValue = 6.757163e-02)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0450 (length 60 amino acids):
MREHIDTLLS LRIRDVVQQV VTISLFLSVV LVGWRGAAVI TNCEASIVVV LSGSMEPGYH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -40.94 (PValue = 1.369330e-01)
Components of the Score Function:
Profile Score...............................................: -4.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.05
Term 14 Hydrophobicity of Tail [26..end]...................: -3.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0320 (length 60 amino acids):
MAAMASRALI SSPSHLLQKF DSCRTIFMCC DIQEKLRNRI PNFQAAVDVS NSMATIHNTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -55.39 (PValue = 3.457808e-01)
Components of the Score Function:
Profile Score...............................................: -12.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.66
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0240 (length 60 amino acids):
MRRSAWVFVA PWVPPPRHDV KVTMPPPPGG EVGGSYGVST GYSDRLARTP YWKRMALSTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -67.80 (PValue = 5.914080e-01)
Components of the Score Function:
Profile Score...............................................: -14.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.39
Term 14 Hydrophobicity of Tail [26..end]...................: -1.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0200 (length 60 amino acids):
MSHASTFAAG ELPIRVLTFN LWGIFNSRMR EARMKVFATK IEHYDVILLQ EQFSVEDFDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -70.65 (PValue = 6.461972e-01)
Components of the Score Function:
Profile Score...............................................: -26.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.44
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0060 (length 60 amino acids):
MGNTCTKTGE VVDNRSNGTS GNKRFNRYRT KQYAKPEDVP SPPANNERVA DLKKMTVVKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -67.78 (PValue = 5.910703e-01)
Components of the Score Function:
Profile Score...............................................: -23.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0015 (length 60 amino acids):
HEQQHFYSQR SKPICFLPPY LHNGQGQPEA PEEGAADNIR GITRGGVKRI SSEVYEEVRR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -74.78 (PValue = 7.192414e-01)
Components of the Score Function:
Profile Score...............................................: -23.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.77
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0010 (length 60 amino acids):
MREENNVPAE WAPRDTHRLD PLQLLPPSQR HCGQSSAAES GEGCHSRSRG KPEVHSTRAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -61.21 (PValue = 4.588354e-01)
Components of the Score Function:
Profile Score...............................................: -7.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1830 (length 60 amino acids):
MFTSKSEYDR GVNTFSPEGR IFQIEYAVEA IKLGSTSLGI RTPKGVVLAA EKRVPSTLVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -32.48 (PValue = 6.985993e-02)
Components of the Score Function:
Profile Score...............................................: -6.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.03
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1569 (length 60 amino acids):
MEPSILNMQD YAAASSWRRR DQLRGLLSNH ADLVTSCIPL AAQGVLFTSA QIALHNTEKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -57.53 (PValue = 3.861817e-01)
Components of the Score Function:
Profile Score...............................................: -12.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.75
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1555 (length 60 amino acids):
MQGTWSVLKK NCLNFVPGLA LFASQSRDAF ATWLKIYNRG YTYGPQEFYE QAEVYTPDYW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -79.88 (PValue = 7.961557e-01)
Components of the Score Function:
Profile Score...............................................: -18.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.17
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.83
Term 14 Hydrophobicity of Tail [26..end]...................: -3.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1550 (length 60 amino acids):
MHRPSRKHVN KSGHIRYSKK IGLGFKTPAK ALNGKYIDRK CPFTSNVVIR GRILRGVVHS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -42.96 (PValue = 1.586432e-01)
Components of the Score Function:
Profile Score...............................................: -20.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.16
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Query sequence LmjF.21.1370 (length 60 amino acids):
MDDSRKADEQ ERGVDTMEKS VAVKVPLPAL LDIKAEALRS NPSFVVTCFS TLLTAVLLGL
Best predicted site is shown in red.
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Prediction of potential C-terminal GPI-Modification Sites
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Use of the prediction function for METAZOA
Potential GPI-modification site was found.
Quality of the site ............... : S
Sequence position of the omega-site : 41
Score of the best site ............ : 0.95 (PValue = 1.424197e-03)
Last modified 17th June, 2005