 |
GPI Lipid Anchor Project |
 |
big-PI Predictor
The GPI Prediction Server
Version 3.0, June 2005
Please, refer to ...
- Eisenhaber B., Bork P., Eisenhaber F.
"Sequence properties of GPI-anchored proteins near the omega-site:
constraints for the polypeptide binding site of the putative
transamidase"
Protein Engineering (1998) 11, No.12, 1155-1161
- Sunyaev S.R., Eisenhaber F., Rodchenkov I.V., Eisenhaber B., Tumanyan V.G., and Kuznetsov E.N.
"Prediction of potential GPI-modification sites in proprotein sequences"
Protein Engineering (1999) 12, No.5, 387-394
- Eisenhaber B., Bork P., Eisenhaber F.
"Prediction of potential GPI-modification sites in proprotein sequences"
JMB (1999) 292 (3), 741-758
- Eisenhaber B., Bork P., Yuan Y., Loeffler G., Eisenhaber F.
"Automated annotation of GPI anchor sites: case study C.elegans"
TIBS (2000) 25 (7), 340-341
Output of the prediction tool:
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1160 (length 60 amino acids):
MDVRRTPTPT TLTQYIIKSQ PPHSRGDFTL LMMAIQTSVK VIEKNIRRAG MKGMLGYIAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -63.25 (PValue = 5.001476e-01)
Components of the Score Function:
Profile Score...............................................: -11.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1265 (length 60 amino acids):
MPLPLTSLAR ASASPCAVAG STTTGTAVAA GSSSGADCYV IVWVEGRERP VYACTAPLPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -64.19 (PValue = 5.190821e-01)
Components of the Score Function:
Profile Score...............................................: -16.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.13
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1080 (length 60 amino acids):
MSSRQMRRLQ DLVDRATGLD ADDFDDDDAV PRTMQVRKSV HHRQQKKSKK KTGAAASPPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -86.00 (PValue = 8.668659e-01)
Components of the Score Function:
Profile Score...............................................: -20.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.36
Term 4 Volume Compensation (-1, 1, 2).....................: -5.92
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1210 (length 60 amino acids):
MPEISSEVAP AIKSIFQGRF FLTKLLGKGG FGEVYAAIQT SSNEMVAVKM EKNNGRNSFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -54.54 (PValue = 3.301785e-01)
Components of the Score Function:
Profile Score...............................................: -5.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.35
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1165 (length 60 amino acids):
MWGGGRLMLQ RTTAVSKGGA DPDERIPAFI PVTRDTAPMR LSVLSATSWG THTHTQAHAH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -64.52 (PValue = 5.258958e-01)
Components of the Score Function:
Profile Score...............................................: -10.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.85
Term 14 Hydrophobicity of Tail [26..end]...................: -3.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1040 (length 60 amino acids):
MCITHQHQAV DGAARAVDRR HSTPSPHLPL PLPLPLPAQT TQHIFSHVIE SDAAAEVQSD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -70.52 (PValue = 6.436816e-01)
Components of the Score Function:
Profile Score...............................................: -17.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.70
Term 4 Volume Compensation (-1, 1, 2).....................: -1.06
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.19
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0850 (length 60 amino acids):
MQQPCFFAAR CGAQRISRLA TAAAATVSSS PAIMRCAMSS SSSSSTSSNG LLTVHASATA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -14.80 (PValue = 1.242994e-02)
Components of the Score Function:
Profile Score...............................................: 11.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0840 (length 60 amino acids):
MSAPPSQPHS MWVRRGHSTH DAAAALFEEM SHAARTGGGA GALPTSLLTA APRSHVQHLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -44.23 (PValue = 1.734744e-01)
Components of the Score Function:
Profile Score...............................................: -4.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.36
Term 4 Volume Compensation (-1, 1, 2).....................: -1.82
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1228 (length 60 amino acids):
MESSLTAGGE MRMNSCRLCA SPSVTLFHTD KMREYYRCHQ CSLVFVPDRF MLSSAEEKAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.97 (PValue = 6.333771e-01)
Components of the Score Function:
Profile Score...............................................: -8.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.65
Term 4 Volume Compensation (-1, 1, 2).....................: -1.52
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0260 (length 60 amino acids):
MALLSPASSA SAPPSSRDKA SYCLQQAQAA KAAGNAALQA GNPRGASFEY KKVYLYLAEY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -33.38 (PValue = 7.539187e-02)
Components of the Score Function:
Profile Score...............................................: -13.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.26
Term 4 Volume Compensation (-1, 1, 2).....................: -0.75
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0210 (length 60 amino acids):
MPAFAFRSNP HKRGAAAVLL LLAIAVVATL TVSAQTIDDY PPVACDGTVP NCLECRKVGM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -66.27 (PValue = 5.610125e-01)
Components of the Score Function:
Profile Score...............................................: -11.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0035 (length 60 amino acids):
MGPRAAGFLI GGFVTAMASA VLLQYDVLRK QELTTRKTEE VVVQADMIVH RFHVIEAGLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.35 (PValue = 3.636228e-01)
Components of the Score Function:
Profile Score...............................................: -17.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.98
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0460 (length 60 amino acids):
MSLPSAQEAA APSVTTTAHK APAEISQDNP LYSLSPLDGR YKRDTAALRA YFSEYALFKY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -61.33 (PValue = 4.612559e-01)
Components of the Score Function:
Profile Score...............................................: -8.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.23
Term 9 Volume Limitation [3..8]...........................: -1.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0400 (length 60 amino acids):
MEYDDGEYGR ESSVEALAQS QESEQVASAA SGLPESSSSA GSAKPSFRIL STRQLAQWAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -36.36 (PValue = 9.616504e-02)
Components of the Score Function:
Profile Score...............................................: 5.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0390 (length 60 amino acids):
MTVLLALAIC LAASTACAEM LLAPSDSKIP FTTFGQLQQV CAATQAGSTP VAMYTATMTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -44.96 (PValue = 1.825138e-01)
Components of the Score Function:
Profile Score...............................................: -1.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0320 (length 60 amino acids):
MTHANPPANR PPRRPLPFSP TPAQTHPSER IHLTRRHDRS LIAFVARIKD REGDNAHVIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -67.93 (PValue = 5.940607e-01)
Components of the Score Function:
Profile Score...............................................: -28.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -23.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0290 (length 60 amino acids):
MRSSRHLCGL PTVRTVAATG WRYHRHGAPE KVLQYERYRV PFDRTSGQVV VKMLAAPVHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -61.82 (PValue = 4.711051e-01)
Components of the Score Function:
Profile Score...............................................: -5.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.53
Term 9 Volume Limitation [3..8]...........................: -1.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0200 (length 60 amino acids):
MSVKHLLMAA MLVAVACSVA MASDASSWSS SSAPAHGSVS LVTMPTAPSS KSSISSSSAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -53.35 (PValue = 3.090249e-01)
Components of the Score Function:
Profile Score...............................................: 1.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0130 (length 60 amino acids):
MGPFAPRCCA LALLCSVLVL AAVLVRAESF TVTRDVTMSS TSFDDYTMVL DLSSSSADVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -41.27 (PValue = 1.402775e-01)
Components of the Score Function:
Profile Score...............................................: -0.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.15
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0127 (length 60 amino acids):
MLESDNGARP LHDGTVLISP DASPNLTRRA TNHYSAENTE APPLVDLLMR ASETIREERG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -81.21 (PValue = 8.135265e-01)
Components of the Score Function:
Profile Score...............................................: -19.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.65
Term 14 Hydrophobicity of Tail [26..end]...................: -3.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1240 (length 60 amino acids):
MGLLNTKPCS LIPAKEAFER EKKIYDKAIL SFDGVNGYDV YNCSVPFTYD GKTYIFGRVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -50.36 (PValue = 2.593003e-01)
Components of the Score Function:
Profile Score...............................................: -6.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.39
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.06
Term 14 Hydrophobicity of Tail [26..end]...................: -1.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1230 (length 60 amino acids):
MGSNASHTEP QVPRECTMVA KRKEFELTKV IQEATFLTFK GLDTHDVYNC CVPFKISGTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -64.27 (PValue = 5.207364e-01)
Components of the Score Function:
Profile Score...............................................: -16.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1170 (length 60 amino acids):
MEEDLAYKII VIGSVSVGKS NITSRFCDGA FYPDLVPTLG MDFKYSSCNT LEKRPRCVRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -61.16 (PValue = 4.577514e-01)
Components of the Score Function:
Profile Score...............................................: -5.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.05
Term 4 Volume Compensation (-1, 1, 2).....................: -1.41
Term 5 Volume Compensation (-1, 2)........................: -2.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.50
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1160 (length 60 amino acids):
MANPNTPGGD CDYIFKIIVI GDSGVGKSSL TVRLSEDVFY KDYASTIAID FRMHQMNYMD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -94.56 (PValue = 9.308826e-01)
Components of the Score Function:
Profile Score...............................................: -13.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.04
Term 14 Hydrophobicity of Tail [26..end]...................: -5.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -65.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1040 (length 60 amino acids):
MTQASASEVV SVGRRSTAIG KESSLAAPSL SIATTPFSLR TGAALPREIL AWLQSLQLGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -27.63 (PValue = 4.560791e-02)
Components of the Score Function:
Profile Score...............................................: 0.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.51
Term 9 Volume Limitation [3..8]...........................: -1.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0990 (length 60 amino acids):
MSRTKETARA KRTITSKKSK KAPSAVSGVK MSHRRWRPGT CAIREIRKFQ KSTSLLIQCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.47 (PValue = 3.111189e-01)
Components of the Score Function:
Profile Score...............................................: -12.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.97
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0930 (length 60 amino acids):
MASASVGEDA AQLSKQHQAT LHKPNGDWPN KAAPVVTPRP NTTAHKCSLR SQTAGCSPQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -73.73 (PValue = 7.016016e-01)
Components of the Score Function:
Profile Score...............................................: -10.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.43
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0550 (length 60 amino acids):
MPRNRLVVAC NASTAGRQAQ SLALSVSLST TLRSSTALAL TKSLVDITTR RGSRHSLLHT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -51.74 (PValue = 2.815397e-01)
Components of the Score Function:
Profile Score...............................................: -0.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.65
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0830 (length 60 amino acids):
MYRKDVHDDA TATRSSRPIV VVTINADESE QEDIDGEDTI LFGSDVVDAT RSDGDARQSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -67.74 (PValue = 5.903324e-01)
Components of the Score Function:
Profile Score...............................................: -12.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.76
Term 4 Volume Compensation (-1, 1, 2).....................: -2.33
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.89
Term 14 Hydrophobicity of Tail [26..end]...................: -3.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0760 (length 60 amino acids):
MTGTPPLWRR LQPLQPTLPL FAGSNHSARK TTTEHAAAAP RRMSYSFVVV PPPVPAATPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -41.65 (PValue = 1.442790e-01)
Components of the Score Function:
Profile Score...............................................: -8.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0680 (length 60 amino acids):
MRTSDARPAS PSAAPPQSRK YQLSQRPLQL PRPPPRRFLE HPHHNLLPCT SDVKRLMENE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -90.60 (PValue = 9.055957e-01)
Components of the Score Function:
Profile Score...............................................: -14.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0465 (length 60 amino acids):
MSVDSSSTHR RRCVAARLVR LAAAGAAVTV AVGTAAAWAH AGALQHRCVH DAMQARVRQS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -63.70 (PValue = 5.092376e-01)
Components of the Score Function:
Profile Score...............................................: -13.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.77
Term 14 Hydrophobicity of Tail [26..end]...................: -3.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0450 (length 60 amino acids):
MPSGNGCRAN QRREREMKKT QGAGVKHTSE DMKKHEQSKN AIQCKVCLQG FPRTVRRPEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -75.37 (PValue = 7.289586e-01)
Components of the Score Function:
Profile Score...............................................: -12.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.12
Term 14 Hydrophobicity of Tail [26..end]...................: -1.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0360 (length 60 amino acids):
MRPRRFVHPE AATLFSKWPW VRRVPIFGEA VEGYGPKVIV ALGATNLLCR GLADRILTGQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -8.54 (PValue = 5.817729e-03)
Components of the Score Function:
Profile Score...............................................: 0.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -2.08
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0330 (length 60 amino acids):
MGTTRASGPV VTSTCSAESG GRGITTTLCA SFEFPLRLQS TDGVAVAVAP SGDATFLQNI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -45.96 (PValue = 1.952865e-01)
Components of the Score Function:
Profile Score...............................................: -13.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0250 (length 60 amino acids):
MRQRSSFSAV SSAAMFKNTL TTQRAQKGDY GFNVFHNSNP QHGGSYARHE RRMREDEVED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -103.91 (PValue = 9.688779e-01)
Components of the Score Function:
Profile Score...............................................: -19.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.95
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.46
Term 14 Hydrophobicity of Tail [26..end]...................: -4.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0220 (length 60 amino acids):
MSYRARQSEF PNWSPQEEGV ATNRTSASVT DDDLRRDFDS EVLELGHDKS LSRKERAARK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -96.72 (PValue = 9.420111e-01)
Components of the Score Function:
Profile Score...............................................: -25.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.87
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -1.74
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.25
Term 14 Hydrophobicity of Tail [26..end]...................: -4.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0180 (length 60 amino acids):
MALVHTTYPQ CLSLVEADTA EAEVQQALED GANTLYFSHH FNYTDVPPSI AALREQLEVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -50.87 (PValue = 2.673440e-01)
Components of the Score Function:
Profile Score...............................................: -3.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.72
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.53
Term 9 Volume Limitation [3..8]...........................: -0.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0160 (length 60 amino acids):
MTTEGNSASM SGPPPLYDFE AEAHQLTREQ LEERVLQMRA ANVVLQTSVL RLREFLATLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -44.06 (PValue = 1.714618e-01)
Components of the Score Function:
Profile Score...............................................: -15.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.51
Term 4 Volume Compensation (-1, 1, 2).....................: -4.25
Term 5 Volume Compensation (-1, 2)........................: -0.97
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1150 (length 60 amino acids):
MGGKNSTQRQ GAQLRNGNGG GSTAPGRQAP SNMPPHLADQ YDNNSTRQRN QPPGNANNTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -60.52 (PValue = 4.449649e-01)
Components of the Score Function:
Profile Score...............................................: -4.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.47
Term 4 Volume Compensation (-1, 1, 2).....................: -0.14
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.40
Term 14 Hydrophobicity of Tail [26..end]...................: -3.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0120 (length 60 amino acids):
MNQMHELSHG VSAMPFSKTK RHNPYASKVL APEDSVEFNS MLNSPLSTHQ SPLNWEARAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -59.31 (PValue = 4.208871e-01)
Components of the Score Function:
Profile Score...............................................: -9.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.31
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1630 (length 60 amino acids):
MTTTMDPDAP SVLTSEVYNA AEAIFNMLQN KEKLVSFLDC TTLLRGMGMN PTHDDMDKLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -82.70 (PValue = 8.316275e-01)
Components of the Score Function:
Profile Score...............................................: -11.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -2.08
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1550 (length 60 amino acids):
MAAPDTSVPP TADTASAVNN GDDVVAFVVG DGQHKLYFSK RALMRHAPFF RAYFTEHAAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -67.46 (PValue = 5.846858e-01)
Components of the Score Function:
Profile Score...............................................: -14.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.60
Term 14 Hydrophobicity of Tail [26..end]...................: -2.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1530 (length 60 amino acids):
MAPLTTFPSP RGPAAATASS QESVSVIVRL KGAPKFSSST ALLSYTVEDG TLATPRVSCR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -48.96 (PValue = 2.375573e-01)
Components of the Score Function:
Profile Score...............................................: -1.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.32
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.74
Term 14 Hydrophobicity of Tail [26..end]...................: -2.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1460 (length 60 amino acids):
MPESEEERRL RKEKRRSAAR KAEEAEKKGA AASAEASSPS RIPSQTTATA SATTTAPSGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -46.08 (PValue = 1.968956e-01)
Components of the Score Function:
Profile Score...............................................: 0.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1430 (length 60 amino acids):
MERRRHYEVL CIADFSSAEE VRLAYKSLAL KYHPDKNLGD PTAAERFRAV CRAYEVLSNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -62.57 (PValue = 4.862587e-01)
Components of the Score Function:
Profile Score...............................................: -15.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1360 (length 60 amino acids):
MMSGKDAFII PLQDADPSLF GSPADRSSVN GGTATTQTQR GSPSRQGAAM GGGLHLQSSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.45 (PValue = 3.285295e-01)
Components of the Score Function:
Profile Score...............................................: -2.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.94
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1320 (length 60 amino acids):
MPSGVAPSFT GQPPPSLLEA PHISDKSTPP AVLSRANVTK NSPPANSNHM KQIARVRLNP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -46.95 (PValue = 2.086802e-01)
Components of the Score Function:
Profile Score...............................................: -13.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.93
Term 5 Volume Compensation (-1, 2)........................: -1.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1280 (length 60 amino acids):
MSPQTASAPK APAPPLPLWQ TLGVSGFAGM FGWCFTHPFE MWKNTVMMAA PGTSQLDSLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -69.54 (PValue = 6.252185e-01)
Components of the Score Function:
Profile Score...............................................: -10.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1250 (length 60 amino acids):
MSVTGPSSAA ATPARGGRTS AADRPHREPQ HGLGAGSTIT ISRGDDSGSG DRLLTGAKHD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -60.73 (PValue = 4.492150e-01)
Components of the Score Function:
Profile Score...............................................: 4.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.46
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1240 (length 60 amino acids):
MPLEHINLAR DRLNSAAAAS SGRGGGSGEA AARQGGEKFA ATPEEMRVIQ EKMKDPVFAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -85.31 (PValue = 8.600401e-01)
Components of the Score Function:
Profile Score...............................................: -16.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.51
Term 4 Volume Compensation (-1, 1, 2).....................: -2.35
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0960 (length 60 amino acids):
MRHRESLFVL TDFALYPTGM AVLRCSAVTA ASRPLAFVLA PYTEPSFNLL DYLGTCTDTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -49.40 (PValue = 2.442378e-01)
Components of the Score Function:
Profile Score...............................................: -2.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0930 (length 60 amino acids):
MSRYTVTENT NRSAACQPAA AGAGATATTS PSPEVYFKKQ VLKLGMDGTS LSRLVVVTDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -31.90 (PValue = 6.648707e-02)
Components of the Score Function:
Profile Score...............................................: -11.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0860 (length 60 amino acids):
MLFGRDLCSL PTPHRPTHTQ KKNTKTRTIH VSPALSHTRA TMPQVSQPLP MAGDYLVTTF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -54.38 (PValue = 3.273316e-01)
Components of the Score Function:
Profile Score...............................................: -8.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.78
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0840 (length 60 amino acids):
MSHPAFSSGQ PPGMIGSAGG TGSALLPNIT AELRGEFYPL LSTLASCESG ISATYVMELF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -50.78 (PValue = 2.659897e-01)
Components of the Score Function:
Profile Score...............................................: -13.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -2.12
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.96
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0820 (length 60 amino acids):
MELAQVVHAL QRAATVPLAV EVLLQYNNPL SEKEATQLRK FRHLQREQLE GGLKVEEPSE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -92.17 (PValue = 9.164225e-01)
Components of the Score Function:
Profile Score...............................................: -17.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0800 (length 60 amino acids):
MLLRRATRLA RVYGGGATTA FVPGSSSSSS SSSSTASVGA DYLRGRSIGA KALLGRRARQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -38.05 (PValue = 1.098984e-01)
Components of the Score Function:
Profile Score...............................................: 2.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0700 (length 60 amino acids):
MPTELLDDST QDAEEEFIFN EYAIDDSLDP LNRLLMYYQS DFSLQRLVLV RELASTAQFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -49.03 (PValue = 2.386192e-01)
Components of the Score Function:
Profile Score...............................................: -10.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.63
Term 4 Volume Compensation (-1, 1, 2).....................: -7.27
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0560 (length 60 amino acids):
MFLKHPVISS LKIYFSSVHC KAYIGRIIFL GEMTESFIIL ALPYLQQSQD SLQSAQYEAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -61.07 (PValue = 4.559429e-01)
Components of the Score Function:
Profile Score...............................................: -14.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.27
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4930 (length 60 amino acids):
MRFFFFAVAG WGGGGNPVRC TLPPVRDAVV HFLSTFLCLS SLHFDVLRSF INRRPTLPKP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -83.18 (PValue = 8.371721e-01)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4910 (length 60 amino acids):
MPLPPVESGP AAMTRRNFLV EMNRLRVSQY MPTRKQLEEE DLRIATIRQE EKRAKHAEWA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -93.70 (PValue = 9.259201e-01)
Components of the Score Function:
Profile Score...............................................: -23.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.31
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.23
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0470 (length 60 amino acids):
MSRTTSTDFV TEAGGHPFSS PGVSPMATMQ NAEDMDLDTL RRSVQVQKQL DVPPPPTAQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.73 (PValue = 6.095832e-01)
Components of the Score Function:
Profile Score...............................................: -7.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.64
Term 4 Volume Compensation (-1, 1, 2).....................: -4.72
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.67
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.26
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0450 (length 60 amino acids):
MASFLSTTAL LVALLVAMVP WACVPTVYAS TPHHGYASCD SSVVQSSGYI SIPGVNKTLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -36.66 (PValue = 9.847195e-02)
Components of the Score Function:
Profile Score...............................................: -8.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0240 (length 60 amino acids):
MVPARHIIHY FADRHTAAVA TAFFIYVLII GWCGNTGTRE VQQRTEAVFR RLHSTADASS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -59.79 (PValue = 4.303420e-01)
Components of the Score Function:
Profile Score...............................................: -14.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0180 (length 60 amino acids):
MTKSSQHQHK SSSFTPSSTN LFVRYLPREV DDNRLREIFS AFGKITSSMV MRDIYNGQSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -56.35 (PValue = 3.635477e-01)
Components of the Score Function:
Profile Score...............................................: 5.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5750 (length 60 amino acids):
MNLDQLSQFL ATVVRRHTAR EESIGAKRRL VPLYRGDTDD DGARPLPVAS LKTLYTDFEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -40.75 (PValue = 1.349742e-01)
Components of the Score Function:
Profile Score...............................................: -12.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.18
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.07
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5730 (length 60 amino acids):
MHSVSLAGLC AELSRIQVDL LQRRGAPLLL AHEGIQLLRE QLPAIELPSC VHTQISMLVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -50.19 (PValue = 2.565213e-01)
Components of the Score Function:
Profile Score...............................................: -15.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.83
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5490 (length 60 amino acids):
MQEETPLTSL KEAVPAGRIV ARLSATLQQT EQACAELSRL ESLLSSLSSG AADLVRASTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -56.36 (PValue = 3.638126e-01)
Components of the Score Function:
Profile Score...............................................: -1.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.54
Term 4 Volume Compensation (-1, 1, 2).....................: -2.04
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.53
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5430 (length 60 amino acids):
MWHTARLCCA VAAETVEKCL RDIHQGRIAA ALPRLNELKA ASCTVQGIDY ARALCFLFDK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -54.52 (PValue = 3.297779e-01)
Components of the Score Function:
Profile Score...............................................: -12.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: -0.99
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5190 (length 60 amino acids):
MDDVKRGDDL STPRALVSST TELHPGGVAS RDDDDMSELV PLLQRSRSQR FPPPSFALAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -50.18 (PValue = 2.563409e-01)
Components of the Score Function:
Profile Score...............................................: -9.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5170 (length 60 amino acids):
MASIEIPPED RQHIDYLADL FAVIIAIEQI EKANRRDLIN PNQYDSTVRR LLEKYKNTVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -69.64 (PValue = 6.270674e-01)
Components of the Score Function:
Profile Score...............................................: -3.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.86
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.99
Term 9 Volume Limitation [3..8]...........................: -2.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.96
Term 14 Hydrophobicity of Tail [26..end]...................: -2.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5040 (length 60 amino acids):
MLRRTLRRLM PSDAIGSVHP DVLWGYQQGQ YAGPGWANFV KSLPLETLAM QGGSTMANLN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -68.29 (PValue = 6.010982e-01)
Components of the Score Function:
Profile Score...............................................: -9.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4890 (length 60 amino acids):
MVCAPHDAQC FCWPFCVSAA GSCSHCPFTS PVSRGAPKSS RTPSSRGRRH TRTRQIQTKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -69.79 (PValue = 6.300259e-01)
Components of the Score Function:
Profile Score...............................................: -13.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.61
Term 14 Hydrophobicity of Tail [26..end]...................: -3.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4820 (length 60 amino acids):
MNPTSMEELL AANAAAAHEL RGVAVLDVPA FDPDGPSRVS ISNRNDSSAM MSEAMRRRAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -72.46 (PValue = 6.792618e-01)
Components of the Score Function:
Profile Score...............................................: 2.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.37
Term 14 Hydrophobicity of Tail [26..end]...................: -4.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4790 (length 60 amino acids):
MLSESDESTY SVHEAHRDDR GAVSKQVGNE TEPETSSPLA RYYPLGTKER HAFDEHMRHL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -92.15 (PValue = 9.163150e-01)
Components of the Score Function:
Profile Score...............................................: -19.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.50
Term 4 Volume Compensation (-1, 1, 2).....................: -7.28
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.51
Term 14 Hydrophobicity of Tail [26..end]...................: -3.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4760 (length 60 amino acids):
MYVRIHETYS GPPPPLLTLP PAHLFLFASS AAMSLRGSCV RLQQTALEVS TLHRLLRHCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.96 (PValue = 6.684406e-02)
Components of the Score Function:
Profile Score...............................................: -7.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4730 (length 60 amino acids):
MAVHISSNTV VASLWGSEDV TAIPLQSSGQ FLSLRLSPTT AIADNTVTSV AFHPVDETCF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -62.39 (PValue = 4.825998e-01)
Components of the Score Function:
Profile Score...............................................: -6.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.60
Term 9 Volume Limitation [3..8]...........................: -1.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.30
Term 14 Hydrophobicity of Tail [26..end]...................: -3.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4720 (length 60 amino acids):
MSDETVCIEA GERLYVLYGS ETGNAESIAK RLHHDATTTH GFPDAECMTL NQAVAMKLFD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -55.88 (PValue = 3.547593e-01)
Components of the Score Function:
Profile Score...............................................: -8.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.78
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4700 (length 60 amino acids):
MNPATKDVAS AEEESPVVCT AKQYIFDLHS YAWKESDCLI RIPRPHKGMG HGGMRVCYAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.58 (PValue = 3.309873e-01)
Components of the Score Function:
Profile Score...............................................: -3.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4610 (length 60 amino acids):
MDISYQLWSL VEQARRSATT PPASITLPSR RTRTTEETQA TDSLLTTSQA LDRAADMAID
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -51.11 (PValue = 2.712678e-01)
Components of the Score Function:
Profile Score...............................................: 1.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.37
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4580 (length 60 amino acids):
MSHSEAPRQD VLAAATCNKL PQRVWVDDED VAVEQETPAF FKESHVKPAW ALSDTTRADT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -72.12 (PValue = 6.731259e-01)
Components of the Score Function:
Profile Score...............................................: -11.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.87
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4330 (length 60 amino acids):
MPSTRRSISS QPRRTGTVTA DPASRSPTRS TCRTRQEKGK PCYEVVETRE EVTTYIVTAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -67.83 (PValue = 5.919860e-01)
Components of the Score Function:
Profile Score...............................................: -27.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.58
Term 4 Volume Compensation (-1, 1, 2).....................: -3.66
Term 5 Volume Compensation (-1, 2)........................: -0.52
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.93
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4230 (length 60 amino acids):
MFALWRGHKL VHLVFFYKAH HTLFQHFSRA SCITLYSAAK NKRTRMSEDL FKEALQSLSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -55.89 (PValue = 3.549860e-01)
Components of the Score Function:
Profile Score...............................................: -10.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.32
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3190 (length 60 amino acids):
MPPAPPPALL PIEEPPIGTQ PAAHLASGTT SQNTSSNATG GAVVCDNCKT RGHLRRNCPK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -80.42 (PValue = 8.033445e-01)
Components of the Score Function:
Profile Score...............................................: -13.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.99
Term 14 Hydrophobicity of Tail [26..end]...................: -3.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3210 (length 60 amino acids):
MTETIKWKNV AIQDEVVPRP SDIKLPDDLA ELIYMAKLAE EAERFDEMLL CIRKYVRLNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -62.67 (PValue = 4.882604e-01)
Components of the Score Function:
Profile Score...............................................: -23.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.66
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4170 (length 60 amino acids):
MSSPSNFKKL QVVSLSKDFR NSTSVVEAQL PEEVPEGMVR VSVKYAGVNA SDLNFTNGSY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -66.04 (PValue = 5.564348e-01)
Components of the Score Function:
Profile Score...............................................: -16.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.97
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4100 (length 60 amino acids):
MAKRPFGFHR VRCWRTRRLL RTPLALAVLV AVSLVAVLWF SVYENTGVTE ISSDRRFFLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.42 (PValue = 4.631501e-01)
Components of the Score Function:
Profile Score...............................................: -7.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4000 (length 60 amino acids):
MPIHQYEGWS YERLRQQRNR AHFLLEDPYR YVTVLLISKP GRPEELKCID SPCYHAAGPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.25 (PValue = 4.798427e-01)
Components of the Score Function:
Profile Score...............................................: -16.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3900 (length 60 amino acids):
MLGEGLDIGF YAEDAYAAYV TDLATSLHLV PHCRNARGAT LEVVFTGPFH DLSAYEEAVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -67.47 (PValue = 5.850178e-01)
Components of the Score Function:
Profile Score...............................................: -12.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.42
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3880 (length 60 amino acids):
MMGPRSRLQP GPSAAVSPLL NTPSPFFFWC LLLSHLASLL AAFLTETKKS KTQLIFVSRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.54 (PValue = 3.301986e-01)
Components of the Score Function:
Profile Score...............................................: -17.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.19
Term 4 Volume Compensation (-1, 1, 2).....................: -3.05
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3780 (length 60 amino acids):
MDAIKTYTYK SGAVYEGTFN GNMRSGRGHW THPQGERYEG EYKDNKQNGL GIYIFSETGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -67.90 (PValue = 5.933399e-01)
Components of the Score Function:
Profile Score...............................................: -26.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.53
Term 4 Volume Compensation (-1, 1, 2).....................: -1.20
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3530 (length 60 amino acids):
MQIFVKTLTG KTIALEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EEGRTLSDYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -74.69 (PValue = 7.177227e-01)
Components of the Score Function:
Profile Score...............................................: -27.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3340 (length 60 amino acids):
MSSSREFITT GGGPAPISRR CVATLHVLFF VLATISAVSL RAPIWLIGGL VYCSKHRNAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -53.02 (PValue = 3.032954e-01)
Components of the Score Function:
Profile Score...............................................: -4.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.11
Term 5 Volume Compensation (-1, 2)........................: -1.91
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.39
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3050 (length 60 amino acids):
MMRIKQKAFV GKKICIAWEV LHDGKGWKAQ GKALQILRFY AFSSEVYLMC RIRDADDKKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -113.83 (PValue = 9.888513e-01)
Components of the Score Function:
Profile Score...............................................: -14.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.39
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.36
Term 14 Hydrophobicity of Tail [26..end]...................: -5.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -40.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -83.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3040 (length 60 amino acids):
MRVARFRLSV CQRAHTRRSC LQCLLLGLTI LLKQPPPPLL AFFLYSASVV CSHVSPSNAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -46.49 (PValue = 2.024047e-01)
Components of the Score Function:
Profile Score...............................................: -8.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.41
Term 4 Volume Compensation (-1, 1, 2).....................: -3.10
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.67
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2950 (length 60 amino acids):
MFRFGRLCTP KAASVQRRFL NIHEYQSKQI IKDNGGRVEF GIACKTIEEV EAACAKIKTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -63.68 (PValue = 5.088603e-01)
Components of the Score Function:
Profile Score...............................................: -13.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2930 (length 60 amino acids):
MYATVPILTL GPYSLALVVG LLLYWNTSLI VSRVLAAFIV SMIAMKVDLA FHLFFSCCHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -60.26 (PValue = 4.397049e-01)
Components of the Score Function:
Profile Score...............................................: -18.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.73
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.74
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2910 (length 60 amino acids):
MLSSAHRAAF ARPTATLWAS ARSFGAGPTR LLLGLEQVQD VPTSTDRKPT GMHRGPGKRQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -94.70 (PValue = 9.316380e-01)
Components of the Score Function:
Profile Score...............................................: -14.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.33
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.40
Term 14 Hydrophobicity of Tail [26..end]...................: -4.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2780 (length 60 amino acids):
MSTTPTSHGA PYHQQLQSHI EALLILFIRD FCAEGASPTR SGYRASHLQA IAQTFYVLQI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.05 (PValue = 6.182943e-02)
Components of the Score Function:
Profile Score...............................................: -4.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2350 (length 57 amino acids):
MVKVGINGFG RIGRMVFRAA QARPEIEIVG INDLLDPEYI AYSLRYNSTH GRFNGTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -78.52 (PValue = 7.772360e-01)
Components of the Score Function:
Profile Score...............................................: -17.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.32
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2460 (length 60 amino acids):
MLQGILGSVP STGIREAENV LRQSWPSLLE LKDEAQTRFC AEAESFLKAQ LTNRPVPSDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.46 (PValue = 5.648112e-01)
Components of the Score Function:
Profile Score...............................................: -11.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.17
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.85
Term 14 Hydrophobicity of Tail [26..end]...................: -3.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2340 (length 60 amino acids):
MILLAFICGA LWVIWSVASF LMYRPRQISG ATVVVTGACT EMGRRLCMQL YARGARVIAW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -52.18 (PValue = 2.890540e-01)
Components of the Score Function:
Profile Score...............................................: -8.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.09
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2170 (length 60 amino acids):
MPAPKNKLKS FGKNRREIRS ATTTYDEHGN WVGTPHQDKM RLVANKMFAN YYDTLQQLGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -65.32 (PValue = 5.419755e-01)
Components of the Score Function:
Profile Score...............................................: -18.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1940 (length 60 amino acids):
MTGQSAALQG SNSALPWYRM GFHTLAEFNT YATFVLLGMS IMMVTSAVTS APDFVTKYFI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -58.11 (PValue = 3.974027e-01)
Components of the Score Function:
Profile Score...............................................: -6.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1930 (length 60 amino acids):
MTSTSAPAVD FSCAICLDTA TEPVVTRCGH LFCWECLDHW LHSAAGAPEC PVCKGRVDER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -76.11 (PValue = 7.408464e-01)
Components of the Score Function:
Profile Score...............................................: -11.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.12
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.38
Term 14 Hydrophobicity of Tail [26..end]...................: -3.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1800 (length 60 amino acids):
MSENVAAAQR RWQAGMHEVE AYLNALDSAR ADSAKAGLYH RAQQCMQHME KIIRLLAKRI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -58.01 (PValue = 3.954209e-01)
Components of the Score Function:
Profile Score...............................................: -20.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1760 (length 60 amino acids):
MSKLFRTVGA KGFQPFDWAN AAQYASGTTP MMKEPACYIN GAWVASALSD KTVTVEDPCT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -64.90 (PValue = 5.336075e-01)
Components of the Score Function:
Profile Score...............................................: -5.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.67
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1090 (length 60 amino acids):
MVSFLRTFAV LCIIAGVLLQ GGTARAPPRA VRAFETKFNS VSQACRGVLE TECPSDGLAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -52.65 (PValue = 2.969771e-01)
Components of the Score Function:
Profile Score...............................................: -6.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1150 (length 60 amino acids):
MHLCASSFSL SFSSVLCQLH RALRNTPHTH LSPSSTAFVC LALCAASACC PVPSRASSEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -57.70 (PValue = 3.893111e-01)
Components of the Score Function:
Profile Score...............................................: -2.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.53
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1350 (length 60 amino acids):
MSRVRVMIDR NQRISLSASA FFFLTHAPLR HGELLPKQRV QRRRRSAMPK LCVEYSKSGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -70.06 (PValue = 6.351052e-01)
Components of the Score Function:
Profile Score...............................................: 1.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -5.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1330 (length 60 amino acids):
MMSARRWCAT TPPHGTGSSG SQSIDEEAVV RAAKWSSSKF EERLGFCAGE TITEERLKRH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -86.79 (PValue = 8.742719e-01)
Components of the Score Function:
Profile Score...............................................: -6.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.87
Term 14 Hydrophobicity of Tail [26..end]...................: -3.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1190 (length 60 amino acids):
MRRAKCHVFV RCAQPAAALT PVRTIIAAKG IVENRIVKHY TNRTVEESKA ERMESVKKTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -63.99 (PValue = 5.152006e-01)
Components of the Score Function:
Profile Score...............................................: -5.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -1.30
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1020 (length 60 amino acids):
MLARFVCVFA IVAAFGLLSP VSADTAHPHH SRSHTVTIES GTLPEAKAFA PLRLGAGEWV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -43.15 (PValue = 1.607328e-01)
Components of the Score Function:
Profile Score...............................................: -11.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0920 (length 60 amino acids):
MVQEWWVSAA QEAVISRKAT SRAERIVTEA DDPRSGTSHF YDSDARLCLV CNARLEGSYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -50.09 (PValue = 2.549089e-01)
Components of the Score Function:
Profile Score...............................................: -5.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.84
Term 9 Volume Limitation [3..8]...........................: -0.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0880 (length 60 amino acids):
MHRAHTYLLC IAAHLLLSPP PPSSPSRFVF ASSSLSCPGC AFSWVTRFVS SMLRRTLCCG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -36.56 (PValue = 9.772594e-02)
Components of the Score Function:
Profile Score...............................................: 5.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0840 (length 60 amino acids):
MIYKAYGSPE NNSGNTHMYS MYAPPNAYVQ GQGGSRTMYG YAGTGGHGSG HPFGYHANPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -53.41 (PValue = 3.100899e-01)
Components of the Score Function:
Profile Score...............................................: -5.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.27
Term 14 Hydrophobicity of Tail [26..end]...................: -2.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0670 (length 60 amino acids):
MADALPSALF IALAILFLFW GTVQTLSLKW ADTIEASDGF TGPTSGQGGS HAVHFRLLYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -32.34 (PValue = 6.903083e-02)
Components of the Score Function:
Profile Score...............................................: 2.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -22.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0650 (length 60 amino acids):
MPTATAAKAA ARPPVRTSVE RLLLHPFVVF LVTFSVRAAL FTSRYSVEPY ISSPVIPHPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -62.20 (PValue = 4.788775e-01)
Components of the Score Function:
Profile Score...............................................: -21.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0560 (length 60 amino acids):
MQSGAALLEP PLSMHCKYTL RILPFSLPPV VSPQLCRNSW FCTHILAAAL AFSVAISSNM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -44.38 (PValue = 1.752446e-01)
Components of the Score Function:
Profile Score...............................................: -4.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.63
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0520 (length 60 amino acids):
MENIKEEICL VANIIDRLLE ANGSLRADVL EPLIQRLRVA AGELSRIDQQ SKSDPVLSSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -50.57 (PValue = 2.626027e-01)
Components of the Score Function:
Profile Score...............................................: -6.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.42
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0340 (length 60 amino acids):
MHLRVYMVDG KRVYTLKKVD PEGKPTLSAH PARFSPDDKL SRHRVTIKRR FKVLPSERRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -76.59 (PValue = 7.483399e-01)
Components of the Score Function:
Profile Score...............................................: -14.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -5.37
Term 4 Volume Compensation (-1, 1, 2).....................: -6.91
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0280 (length 60 amino acids):
MALPFSGFVG TASLSLSLFR RCCLLLSQQL QERAHAHTHT HTQSLTFCHR TMASSATSSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -62.08 (PValue = 4.763580e-01)
Components of the Score Function:
Profile Score...............................................: -8.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.73
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0190 (length 60 amino acids):
MVNFTVDQVR ELMDYPDQIR NMSVIAHVDH GKSTLSDSLV GAAGIIKMEE AGDKRIMDTR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -72.32 (PValue = 6.767484e-01)
Components of the Score Function:
Profile Score...............................................: -6.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.91
Term 14 Hydrophobicity of Tail [26..end]...................: -4.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0170 (length 60 amino acids):
MSCSSPALAR VSFFCSWSLF IAPSPGAEIA ARLAGRGGVE IFLRAALSAF AYPNRAEAHE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -53.18 (PValue = 3.061222e-01)
Components of the Score Function:
Profile Score...............................................: -12.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.97
Term 14 Hydrophobicity of Tail [26..end]...................: -4.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.3010 (length 60 amino acids):
MPPLSRLDAV CDTATTATTN LEDLQELCRR VQLLRKGVND ICNRKIPALE SSIEQFHETH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -79.56 (PValue = 7.917420e-01)
Components of the Score Function:
Profile Score...............................................: -22.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.09
Term 4 Volume Compensation (-1, 1, 2).....................: -2.56
Term 5 Volume Compensation (-1, 2)........................: -1.63
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.96
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2700 (length 60 amino acids):
MSAMVLSIGI PPQERVRLCA VAAADVCQRA VAHMKAAAQC EAHDAAAEPY IRAVYVHRAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -54.65 (PValue = 3.321927e-01)
Components of the Score Function:
Profile Score...............................................: -6.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.12
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.3005 (length 60 amino acids):
MSSSIIIRDL ETCDLGEVLE LLSHLTSAPA LSQEELEQLH ARRVLAGVRT RVAVSSTTQK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -69.51 (PValue = 6.246250e-01)
Components of the Score Function:
Profile Score...............................................: -18.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2970 (length 60 amino acids):
MRCGTALVPS LAIRRFPSVR ARTNSLGTRW HCRRCTDLHE KSTQISRHTH TVSRAKAHIY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.30 (PValue = 5.617461e-01)
Components of the Score Function:
Profile Score...............................................: -15.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.67
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2680 (length 60 amino acids):
MQRFTARYVV SAAASASARR LPSRFGMYWA QRCPSRFAAT KFHLSAADET AAAAKPWVAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -42.40 (PValue = 1.523370e-01)
Components of the Score Function:
Profile Score...............................................: -3.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.27
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2650 (length 60 amino acids):
MSFVVRSLLP HSMRQMCVLV AVTALLAVAH LPTPSRGSVE WVLQQVQVLH RHGSRSAIPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -71.94 (PValue = 6.699254e-01)
Components of the Score Function:
Profile Score...............................................: -14.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.75
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.75
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2620 (length 60 amino acids):
MVDAVSRYDD DEEDDALPFE GLDKASALQE CRVFNKIPLD EEGSIRAMTQ VLYLLSIGVR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -14.81 (PValue = 1.244643e-02)
Components of the Score Function:
Profile Score...............................................: -10.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2950 (length 60 amino acids):
MKEVMQRNRN RRRGPPEGRS VQNVLSTDGI PPGMFAVIDP LSKRLFIPLE SMLDTRAMHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -70.73 (PValue = 6.477303e-01)
Components of the Score Function:
Profile Score...............................................: -16.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.47
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.94
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.74
Term 14 Hydrophobicity of Tail [26..end]...................: -2.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2820 (length 60 amino acids):
MSFTEEFDGA IGIDLGTTYS CTAVFVRGQA EVIPNDMGNR TTPSCVAFYN DDVLVGDAAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -52.89 (PValue = 3.010185e-01)
Components of the Score Function:
Profile Score...............................................: -19.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -17.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2740 (length 60 amino acids):
MNYEGHLKGH RGWVTSLACP QQAGSYIKVV STSRDGTAIS WKANPDRHSV DSDYGLPNHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -87.95 (PValue = 8.846077e-01)
Components of the Score Function:
Profile Score...............................................: -8.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.32
Term 4 Volume Compensation (-1, 1, 2).....................: -1.76
Term 5 Volume Compensation (-1, 2)........................: -0.86
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.64
Term 14 Hydrophobicity of Tail [26..end]...................: -2.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2550 (length 60 amino acids):
MAAKTVRALH LEGNKLFEAG RFSEAARAFR DSVDRFQADR LSTQSAVAEF VKVAGNLCVC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -42.48 (PValue = 1.532166e-01)
Components of the Score Function:
Profile Score...............................................: -5.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2540 (length 60 amino acids):
MSTAGLSRAY AVLRQLDVLR AESITNPLPM SGDRRSRARR KERGGSDVGR SLFPSREELA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -51.81 (PValue = 2.827820e-01)
Components of the Score Function:
Profile Score...............................................: -3.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -2.14
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2420 (length 60 amino acids):
MFRRVSTRVL PTACSAAHNL NLRFCLSINV PTIAESISTG KVVNWTKKVG DAVAEDEVIC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -58.01 (PValue = 3.954720e-01)
Components of the Score Function:
Profile Score...............................................: -13.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.35
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2410 (length 60 amino acids):
MTPLAPSSFK GQLLLALMLS IGLKVLTFSL STILTRLLLP YQNGVYFTFN VYNDAVLFIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -38.77 (PValue = 1.161936e-01)
Components of the Score Function:
Profile Score...............................................: -9.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.65
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2385 (length 60 amino acids):
MNPPDIRDDP ALPQPTAEVA PVLEVDADGI RVREAVHLFL SRLIDPLLRA DPNLAVAGTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -44.69 (PValue = 1.791365e-01)
Components of the Score Function:
Profile Score...............................................: -14.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2270 (length 60 amino acids):
MAVAQSAFGN GTEDSAVLSS TPDTAAAPYG LADGMAQLSR VLHRPWLSGV YMEVTPGMAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -56.67 (PValue = 3.696856e-01)
Components of the Score Function:
Profile Score...............................................: -6.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2130 (length 60 amino acids):
MTQVPGATVK LSEMPKEMEN FAIFCAQEGL AKLRTAQELA SFIRKEFEKK YGPTWNCFVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -81.79 (PValue = 8.207659e-01)
Components of the Score Function:
Profile Score...............................................: -23.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.34
Term 4 Volume Compensation (-1, 1, 2).....................: -3.07
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2390 (length 60 amino acids):
MSDDAKSRVQ VSLRIRPVKK GVRHRTKVVV RGAEGGSVVV DDEQRTKRAY HFDHVFSGDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -66.39 (PValue = 5.635493e-01)
Components of the Score Function:
Profile Score...............................................: -17.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.45
Term 14 Hydrophobicity of Tail [26..end]...................: -2.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0090 (length 60 amino acids):
MRRSHMTPIM VALLLLLASV ASSVSVVTTE GGLAVDAIGY PNNVVRLTAK PADKWTYQPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -80.33 (PValue = 8.021759e-01)
Components of the Score Function:
Profile Score...............................................: -18.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.70
Term 14 Hydrophobicity of Tail [26..end]...................: -5.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0080 (length 60 amino acids):
MQRFSVRSAS AVATVGAART FWDPFGHQPE SMFLDRKDLC QMYPTQKPKT TGGGFGYERG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -92.16 (PValue = 9.163562e-01)
Components of the Score Function:
Profile Score...............................................: -17.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.55
Term 4 Volume Compensation (-1, 1, 2).....................: -4.75
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0010 (length 60 amino acids):
MLRCSPQLLR LRLSGVFACT AALYGRTGAF HPFSQKDEDD LLQVVKTKPR HVLRHVRQQV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -70.85 (PValue = 6.498640e-01)
Components of the Score Function:
Profile Score...............................................: -21.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.24
Term 4 Volume Compensation (-1, 1, 2).....................: -1.80
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2850 (length 60 amino acids):
MQTMAKPATS DPERGFSDDG YSAFRRLLLI ELSVLRRRYG LLSEDHHDGA GGHALPTSAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -41.32 (PValue = 1.407469e-01)
Components of the Score Function:
Profile Score...............................................: -5.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.51
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2820 (length 60 amino acids):
MPRLLHGSQR AGEEHEAEKL TKSLPRTASD LAAQSLANLW RRLFQSYVHF TQPGCLPFVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -63.28 (PValue = 5.007315e-01)
Components of the Score Function:
Profile Score...............................................: -16.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.68
Term 4 Volume Compensation (-1, 1, 2).....................: -4.92
Term 5 Volume Compensation (-1, 2)........................: -7.87
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2810 (length 60 amino acids):
MDAAMDSEGF ALGPVAASRH ANPAVAASLP RLTATMVKQS SQSMRDSYEA ELYRFKSTKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.35 (PValue = 4.415074e-01)
Components of the Score Function:
Profile Score...............................................: -9.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.08
Term 14 Hydrophobicity of Tail [26..end]...................: -4.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2790 (length 60 amino acids):
MSGSFALRKL LFDIDDEEDV NRRGYHYAGA YAPLLHSVAV LQPAAVLPKS GLPFACLCLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -35.93 (PValue = 9.289527e-02)
Components of the Score Function:
Profile Score...............................................: -3.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.19
Term 9 Volume Limitation [3..8]...........................: -0.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2450 (length 60 amino acids):
MWSPSNKRDS LINSDDTFFP FLFHFPGSHP RQMLSSFFAS RSRGSWIPAV DISEQDDGYI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -80.38 (PValue = 8.027830e-01)
Components of the Score Function:
Profile Score...............................................: -17.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.60
Term 14 Hydrophobicity of Tail [26..end]...................: -3.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2440 (length 60 amino acids):
MGSGNTKQPT AALTPTPSSS NEIQMHPGCK KTVDIFSSAD HAEAFTAAAR LPAEAAPRPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -50.94 (PValue = 2.684981e-01)
Components of the Score Function:
Profile Score...............................................: -4.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2230 (length 60 amino acids):
MRRPVDMRTA TVLGAGELGK ACACALAANR SVDFVTLLTR DAAMAAPEKA TATLPSMYSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.26 (PValue = 2.272409e-01)
Components of the Score Function:
Profile Score...............................................: -3.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2150 (length 60 amino acids):
MVLKRMDNTS IEDGLQAATL REIMVLDEVS AGTSNRDRVE RDAFRCGRAV FRPTTAAQSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -60.96 (PValue = 4.538816e-01)
Components of the Score Function:
Profile Score...............................................: -13.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.55
Term 14 Hydrophobicity of Tail [26..end]...................: -2.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2060 (length 60 amino acids):
MPSVDVLQLL QLAYHGSKDE RTQATTELEA VMQSPETGPT CLLTLLRTGV EPSLPAEQSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -32.89 (PValue = 7.233626e-02)
Components of the Score Function:
Profile Score...............................................: -7.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -3.03
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1510 (length 60 amino acids):
MKLVVDELYR SRMLMAGVYV GLAISSTYGF SIFTEHLRNK YSFNQADITT ISTVGNCCGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.46 (PValue = 5.448355e-01)
Components of the Score Function:
Profile Score...............................................: -10.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1500 (length 60 amino acids):
MKLVVDELYR SRMLMAGVYV GLAISSTYGF SIFTEHLRNK YSFNQADITT ISTVGNCCGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.46 (PValue = 5.448355e-01)
Components of the Score Function:
Profile Score...............................................: -10.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1960 (length 60 amino acids):
MSLCDQCEIG CRRVGIKDIE DASAVNADFH FSAIFQPTDP HHHQTEFAKV EGSEKYVEEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -77.09 (PValue = 7.561540e-01)
Components of the Score Function:
Profile Score...............................................: -21.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.40
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.97
Term 14 Hydrophobicity of Tail [26..end]...................: -2.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1930 (length 60 amino acids):
MSLASPSSLP PIALATQRLR TFAAQEEQAH GLTTSTALEE WATQSFEAET ERINRELVQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -68.31 (PValue = 6.015365e-01)
Components of the Score Function:
Profile Score...............................................: -9.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.67
Term 14 Hydrophobicity of Tail [26..end]...................: -1.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1830 (length 60 amino acids):
MKRTIVAWTR KFDVCVLGGG PAGIAAAVRA YELGKKACII EESRIGGADF WNGALQSKTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -51.06 (PValue = 2.704910e-01)
Components of the Score Function:
Profile Score...............................................: -0.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1790 (length 60 amino acids):
MEVPATRPEV TTTGIYGEEL NIVRQHLLRS ELCWCGDLTS RTQVLVVGSA LCAASRKLSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -27.64 (PValue = 4.566095e-02)
Components of the Score Function:
Profile Score...............................................: 7.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1730 (length 60 amino acids):
MATPRSAKKA ARKSSTKSAK AGLIFPVGRV GGMMRRGQYA RRIGASGAVY LAAVLEYLTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -20.53 (PValue = 2.301637e-02)
Components of the Score Function:
Profile Score...............................................: -2.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1710 (length 60 amino acids):
MQRAADGVFE NAYERGAVQG RAQLSSNSDC EGDNEDEDDD VDTSVKPPPA EVTALCWCAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -58.80 (PValue = 4.107326e-01)
Components of the Score Function:
Profile Score...............................................: -13.81
Term 0 Contents and Windows of DE in Region [-11..1]......: -0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1630 (length 60 amino acids):
MQEFPRRTAR KTRREVTGES LTTVSSTSTA TKDEDAQRSE RVENDLSGAL PQTSAAAASS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -47.34 (PValue = 2.141577e-01)
Components of the Score Function:
Profile Score...............................................: 2.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.17
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1605 (length 60 amino acids):
MRLRHACVTL TIAFFVLFLP LLFGGRTSSL RCPAPTPQPS LVHVCVCVFL CVAAVCVAPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -17.62 (PValue = 1.696508e-02)
Components of the Score Function:
Profile Score...............................................: 2.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1390 (length 60 amino acids):
MPQMTENICS VQGAGNTAPQ ADSPCHSVSS ALPATNGLVS NDLTNSSFSE HPLSESSGGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -59.69 (PValue = 4.283424e-01)
Components of the Score Function:
Profile Score...............................................: 0.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1270 (length 60 amino acids):
MTTQQPEWTQ AASDLMARMA ALARKKANGY LDPVHLAYVM FEDENSLASR VVRKLGAASV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -41.06 (PValue = 1.380707e-01)
Components of the Score Function:
Profile Score...............................................: -1.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.82
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1170 (length 60 amino acids):
MITATADAGS AAKAAAAPPA RMFDCLDAAS KERVTMLLSH YQVLLPVEQA SFMQELERYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -72.24 (PValue = 6.753388e-01)
Components of the Score Function:
Profile Score...............................................: -16.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.50
Term 14 Hydrophobicity of Tail [26..end]...................: -3.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0500 (length 60 amino acids):
MASSEGNSTS ANLDDVADEQ RCSRCFCAYL EPTEIHAVGD DLFSDTGASS VSGRRSRSSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -79.75 (PValue = 7.944039e-01)
Components of the Score Function:
Profile Score...............................................: -3.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.62
Term 14 Hydrophobicity of Tail [26..end]...................: -3.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1040 (length 60 amino acids):
MLTAVRPGAA GINQHAPQHA GDAARRRQSA WRTSHRRSSA FGGGNTHSSS RDSAIEVHGI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -34.10 (PValue = 8.005142e-02)
Components of the Score Function:
Profile Score...............................................: -5.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0960 (length 60 amino acids):
MSGRCFSKSL ESDVDSAAAA ESSLSATEVS TDGYRTGKQP RHVAFLLEKD LKETDTEEVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -93.92 (PValue = 9.272132e-01)
Components of the Score Function:
Profile Score...............................................: -24.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0865 (length 60 amino acids):
MDDPKQTLYI RGLPDKSSAN EVRRALYLYC TQFGPVKAVL YSKSKEFYGQ AFVVFTDVGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -50.92 (PValue = 2.681305e-01)
Components of the Score Function:
Profile Score...............................................: -10.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -3.67
Term 5 Volume Compensation (-1, 2)........................: -1.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0800 (length 60 amino acids):
MSFGGFGTGA GAGGFGAKPA TTAGFGVTPS TGAGTGAAAP ASGGRGFGGF GTGATTTTAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -40.30 (PValue = 1.305132e-01)
Components of the Score Function:
Profile Score...............................................: 3.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.01
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0730 (length 60 amino acids):
MLARTSSPGG ARPGSRRHNN ANALVHNPLN FSVQDRRLNT RLLKETQRRK AQLLGMTRHD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -96.53 (PValue = 9.410949e-01)
Components of the Score Function:
Profile Score...............................................: -21.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.05
Term 4 Volume Compensation (-1, 1, 2).....................: -4.51
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.11
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.22
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0680 (length 60 amino acids):
MRLCCLFRCL HSNGFAAHPP TRQPFTLSCP LSALPHTKEL SSSANAKPNM LPGRGRGSFQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.47 (PValue = 2.772239e-01)
Components of the Score Function:
Profile Score...............................................: -3.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.69
Term 14 Hydrophobicity of Tail [26..end]...................: -2.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0550 (length 60 amino acids):
MSALMECPPE ATEIAQCCAA IKAATPLTLS TPLAVAESQP TGGSTMRPKR PAHHDASVTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -48.88 (PValue = 2.363723e-01)
Components of the Score Function:
Profile Score...............................................: 3.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.68
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0540 (length 60 amino acids):
MVRIRSLAKE LRQLELQKQT ASLPPPRAAS SDDVLDDATR SATSSRKPEA PSCSSSPRDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -73.04 (PValue = 6.894884e-01)
Components of the Score Function:
Profile Score...............................................: -0.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.01
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.29
Term 14 Hydrophobicity of Tail [26..end]...................: -3.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0470 (length 60 amino acids):
MQTCISRHHT SKLTLVGTYV GSKVAKAVLM SAATGKLTPE IVGEALMSSS TIRGHVQREA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -68.19 (PValue = 5.990276e-01)
Components of the Score Function:
Profile Score...............................................: 5.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0410 (length 60 amino acids):
MLSLLIDQCG ADASDLPQLV RLNELIRAEE EGTGGGSIVA HTLVATQAPP SPPLAAPTVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -40.15 (PValue = 1.290162e-01)
Components of the Score Function:
Profile Score...............................................: -0.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0400 (length 60 amino acids):
MEESYVEGNL GPVFSNAEPL SLPIVARILH EKRIGAEETD KIKGVLIQSC SEAVNILQED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -67.22 (PValue = 5.800877e-01)
Components of the Score Function:
Profile Score...............................................: -20.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6420 (length 60 amino acids):
MLEFLLRGYL VYLSFVQPVI YGAQLCRSPD PDALQVTNVT LTLIFAWLLE VADVLFLTPF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -21.27 (PValue = 2.479227e-02)
Components of the Score Function:
Profile Score...............................................: -5.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.29
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6380 (length 60 amino acids):
MNIREKTVYN ALPKLPGFSF AELQHPATHG RRQYCTIDEE GTRTVKDAAA LDGSAVAAGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -55.22 (PValue = 3.425359e-01)
Components of the Score Function:
Profile Score...............................................: 0.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.45
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.11
Term 14 Hydrophobicity of Tail [26..end]...................: -0.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0250 (length 60 amino acids):
MSLPVIDIAP LYSDNKADLL RVAHAIDEAC RTWGFFYITG HHIPKERIEQ LTTMASKFFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -77.56 (PValue = 7.632039e-01)
Components of the Score Function:
Profile Score...............................................: -23.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.64
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.21
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0190 (length 60 amino acids):
MEHYEDSFES ATTAMNEEEE AMSVRTSSTA ATSGDSVDAG DDGSVGDVDD AISGGKGMSD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -65.00 (PValue = 5.355942e-01)
Components of the Score Function:
Profile Score...............................................: -7.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0150 (length 60 amino acids):
MMSMRPTTGM APPPTGMAFS ATGSSHTGPM RPTTTMGGGT TLGRIQAQVQ EGTFTSTVYG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -52.55 (PValue = 2.953155e-01)
Components of the Score Function:
Profile Score...............................................: -8.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.42
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0050 (length 60 amino acids):
MRRPEPWQRL LSHVRHTIAT PFVLRIGTGP PGSLPPVAAA PHPPSALPTI AANYSELSAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -46.30 (PValue = 1.999213e-01)
Components of the Score Function:
Profile Score...............................................: -4.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0030 (length 60 amino acids):
MHRFRVCALG AAFCVARRWR SGGGPGDRRV RTDWYRCYPS LMEEKDRDMY HCYYPYLFDH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -84.94 (PValue = 8.562055e-01)
Components of the Score Function:
Profile Score...............................................: -25.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.59
Term 4 Volume Compensation (-1, 1, 2).....................: -3.39
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6910 (length 60 amino acids):
MSFMQTGPQS MLKDGSTFLD DPVLKNIEAC RELSKITRSS MGPNGLCKMV INHLNKLFVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -33.36 (PValue = 7.523363e-02)
Components of the Score Function:
Profile Score...............................................: -7.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6830 (length 60 amino acids):
MSCECDDKSP LLDNEKGALY HGVAQANPGE EYDWRQLHST SIFVDNHTFN SLEEVQGSLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -39.46 (PValue = 1.224829e-01)
Components of the Score Function:
Profile Score...............................................: -11.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6670 (length 60 amino acids):
MSWWSFWSRR SDSKEAATSD NDNRATKTAE PAEMQSFTAA ELAQFTGENG TPIYMSVKGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -67.43 (PValue = 5.841204e-01)
Components of the Score Function:
Profile Score...............................................: -14.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.88
Term 4 Volume Compensation (-1, 1, 2).....................: -3.75
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.29
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.91
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6620 (length 60 amino acids):
MVSFDSVPPD TAAIAAVSAS VFRYVQTVAP SALHVFACVV YVIIMICASH VHPRVVNTTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -33.50 (PValue = 7.609788e-02)
Components of the Score Function:
Profile Score...............................................: -9.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.56
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6560 (length 60 amino acids):
MELSFPDKYY EVAKYFDYYV GNLEESPLLS DAQRLMFYAL RQQADHGQCT TAAPSFWNSR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -77.51 (PValue = 7.623816e-01)
Components of the Score Function:
Profile Score...............................................: -15.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.89
Term 14 Hydrophobicity of Tail [26..end]...................: -3.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6540 (length 60 amino acids):
MSADRPNRCC PTEKGAAQCE YNPAGNDLYM VGPYNSKAGV VLVCDIFGLL PNSKRFADVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -46.58 (PValue = 2.037000e-01)
Components of the Score Function:
Profile Score...............................................: -10.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6345 (length 60 amino acids):
MYLCDLLFLF DKFQSSLPFS TLSLLYYPPL RVLSFHGCTH ILRHGFVMCE RIDSSRLERQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -88.94 (PValue = 8.928999e-01)
Components of the Score Function:
Profile Score...............................................: -13.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.28
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.38
Term 14 Hydrophobicity of Tail [26..end]...................: -3.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6250 (length 60 amino acids):
MLYDEEECIK VIVVGDGNVG KTCMLRRFVR GDFVEQYRKT IGAEFMEKDV FLRSSKTMVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.90 (PValue = 6.320691e-01)
Components of the Score Function:
Profile Score...............................................: -14.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.37
Term 14 Hydrophobicity of Tail [26..end]...................: -3.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6180 (length 60 amino acids):
MCVVHALTST QTVCMMSADP NSFEAIRPKL TAQTLQDIEG LDPQKYGFGR EECCGPIPTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -79.89 (PValue = 7.962158e-01)
Components of the Score Function:
Profile Score...............................................: -19.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.76
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.87
Term 14 Hydrophobicity of Tail [26..end]...................: -2.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6170 (length 60 amino acids):
MAQPCNSLSE FPYAEAAKSL AKRTSLTNQG APPPWTKSIM ESTAVCTEDK VFVIGGMDTC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -44.82 (PValue = 1.807401e-01)
Components of the Score Function:
Profile Score...............................................: -2.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6130 (length 60 amino acids):
MSTRRAHETP IAASSAASTV SSATSSKRPT PQLSSFAIRL RGSKGSSCPA QKTPVSDLCV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -33.21 (PValue = 7.428351e-02)
Components of the Score Function:
Profile Score...............................................: 2.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6110 (length 60 amino acids):
MLNTAFSTAD GRRLPRDLTD QQKRDIEEAF RVLDVKGVST ITPNDLKVAL RALGYEPDKD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -79.27 (PValue = 7.878436e-01)
Components of the Score Function:
Profile Score...............................................: -20.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.93
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6000 (length 60 amino acids):
MADALPSGDR TTATTVGAAA SHRAEEERQQ AEKMALSQQL SEVERQLSEA SQSVVALEKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.10 (PValue = 3.588875e-01)
Components of the Score Function:
Profile Score...............................................: -17.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.20
Term 4 Volume Compensation (-1, 1, 2).....................: -2.89
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5910 (length 60 amino acids):
MLRNALSCFL EQLELARLTE TLPSNIDYAE LVAMVQQRLQ GAPGKTLGVF EHLRAKEIRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.73 (PValue = 1.923976e-01)
Components of the Score Function:
Profile Score...............................................: -13.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.55
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5845 (length 60 amino acids):
MLRFVPRRLA IGAYSMFMIE QKNNPKLKGL SVGDRGKMTS KLYKSLSASD KAALDKRAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -54.48 (PValue = 3.292090e-01)
Components of the Score Function:
Profile Score...............................................: -0.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5840 (length 60 amino acids):
MLRITDLRCS VRRAKVFEIF CREQLLTNMS LRELTQTERH KAMSQLFKKL SEEQLLALKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -57.90 (PValue = 3.932968e-01)
Components of the Score Function:
Profile Score...............................................: -11.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.66
Term 4 Volume Compensation (-1, 1, 2).....................: -4.75
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5830 (length 60 amino acids):
MRCFSTKSTA PTKGFHDNAS GKGSNSVPVK SSALFIEALS KRRTIYSLGN KLSQSHSEVI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -61.19 (PValue = 4.583698e-01)
Components of the Score Function:
Profile Score...............................................: -12.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.85
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.00
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1040 (length 60 amino acids):
MMMEVVVALR LLTIHVLAAL LLVLWSLPLA EGPWPLSVQA ARRSTDAHAE RPSIHPRKYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -82.99 (PValue = 8.349485e-01)
Components of the Score Function:
Profile Score...............................................: -9.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.78
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.29
Term 14 Hydrophobicity of Tail [26..end]...................: -3.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0380 (length 60 amino acids):
MASKLDIIVL GATGFTGRLT CRYLARTAEL KGRWGIAGRS QAKLAALKAE LDINVPTFVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -39.81 (PValue = 1.257923e-01)
Components of the Score Function:
Profile Score...............................................: -11.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.30
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.70
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0270 (length 60 amino acids):
MSPQLIDRVN ASENLIQDIF KRYAPSEIGV AFNGGKDSVV MFELLRRAVT APVLAQCCIF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -32.53 (PValue = 7.018481e-02)
Components of the Score Function:
Profile Score...............................................: -5.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0160 (length 60 amino acids):
MPGGLTRKER RRWETSRRLE LQMSRLNSNA AVAKEMIEES AAQRRGTASD VVDGDAVAAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -43.22 (PValue = 1.615426e-01)
Components of the Score Function:
Profile Score...............................................: -11.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0010 (length 60 amino acids):
MRRVLLCTLR GCLHRGLTLR PESTVDPARY PLGYVPVDGS ESIDLVYALL KRGHFVAPLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -37.56 (PValue = 1.057874e-01)
Components of the Score Function:
Profile Score...............................................: -11.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.64
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1690 (length 60 amino acids):
MFDIREKDVR LEVLSKSPVR PISETHRFGL LVLGLFGMIC GSFGSYTFNL VSGSLQERYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -76.22 (PValue = 7.426198e-01)
Components of the Score Function:
Profile Score...............................................: -6.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1600 (length 60 amino acids):
MPNLASVRVT PVLPHGAYES KAPHRTGASY VDVISSTERE VMEQCLQEQL AVVANLVVDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -33.90 (PValue = 7.871755e-02)
Components of the Score Function:
Profile Score...............................................: -8.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.74
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1550 (length 60 amino acids):
MEQSSSPPAS PSPSPVVLPT WRVGHAVTSS SRCCTAYRGR YVVYAATDNS IALVDVLAEH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -23.22 (PValue = 3.009777e-02)
Components of the Score Function:
Profile Score...............................................: -8.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1520 (length 60 amino acids):
MSTLSYQQQY QQILADLAEV QREDVYVSAV RVPMDAKARH AYYAQYWLSL YVRYVRLARQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -57.52 (PValue = 3.859475e-01)
Components of the Score Function:
Profile Score...............................................: -15.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -3.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1410 (length 60 amino acids):
MQRQSSTKSG CRNASELSPV RSSAYEMRNR ESPPPMRSGS PLSPSAIFVK RAVSNGRPHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -56.12 (PValue = 3.592203e-01)
Components of the Score Function:
Profile Score...............................................: -5.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1400 (length 60 amino acids):
MPLLPPHLLE ALVAECGETT LPELAHLWKR ETELAQAAAC GDALAARAIA EGGRAPLNCV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.92 (PValue = 1.948050e-01)
Components of the Score Function:
Profile Score...............................................: -5.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.47
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1350 (length 60 amino acids):
MPRVSVFLSY ADSFVGTRLL RQFQQYPSHY DIYGCVWDAA AAEQLNAAAS AAQQQLQQPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -67.15 (PValue = 5.785195e-01)
Components of the Score Function:
Profile Score...............................................: -14.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1310 (length 60 amino acids):
MQLGGPAASH HVGGARHCRL VVLSVAVLLV VLFSHGVEHA QGFAFVPVVN TFARPEGSGH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -80.93 (PValue = 8.099390e-01)
Components of the Score Function:
Profile Score...............................................: -12.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.28
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1240 (length 60 amino acids):
MHQKKRKTRH TRTLRPCPLH GSSAKVTVDR LSSVMSHLET CMHLDTQPAL HTRKLCSCNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -46.63 (PValue = 2.042527e-01)
Components of the Score Function:
Profile Score...............................................: 0.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -1.30
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.81
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0990 (length 60 amino acids):
MARRDRVPRH KSHTHKRNKN AKLSPFQREQ KRAKMANQAP TAQTMGSLDS IPHSQRHIFE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -71.01 (PValue = 6.528930e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.13
Term 14 Hydrophobicity of Tail [26..end]...................: -3.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0670 (length 60 amino acids):
MICASTSYAF NLFSGSLRDK YNFDSRQMST INTVGMVFAY FLLPYGTIYD YLGPLPVYIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -40.56 (PValue = 1.330987e-01)
Components of the Score Function:
Profile Score...............................................: -16.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0830 (length 60 amino acids):
MSRTFEDNGC ELPSSAAQRV YVNNMNTLQA TTSLPERTPY SLLERNTEAP GSSTANYVGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -63.58 (PValue = 5.068114e-01)
Components of the Score Function:
Profile Score...............................................: -4.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.66
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0820 (length 60 amino acids):
MGVDVGESAI GVDAVARPIG YGPFSAAAKA RLAREKAHKA VETCDSAAAA ASATVMKNVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -40.61 (PValue = 1.335451e-01)
Components of the Score Function:
Profile Score...............................................: 2.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0590 (length 60 amino acids):
MDLLHFISLV IDLRDYPGYA TCIRATEYPG LALCEYNAVA GMRYTVPLGY AASAVYFYLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -47.19 (PValue = 2.120129e-01)
Components of the Score Function:
Profile Score...............................................: -3.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0490 (length 60 amino acids):
MSPAADTTHS TTKPCAPNRS SIPETCSRAP NGTRASAADE VTLLTAPQFA KSTKDTRSTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -46.77 (PValue = 2.062191e-01)
Components of the Score Function:
Profile Score...............................................: -9.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.17
Term 14 Hydrophobicity of Tail [26..end]...................: -3.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0470 (length 60 amino acids):
MDGIVSRGAR LTFLNADFAE SEACSSALNV SLQPHQGNAT WVYFARGKLA YSNSITLVSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -33.50 (PValue = 7.613377e-02)
Components of the Score Function:
Profile Score...............................................: -3.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0440 (length 60 amino acids):
MLVTMEDYQI IESIGEGSFG KVYKARIKGT GQIVAMKFIV KKGKNEKELK NLRSEIEILT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -72.06 (PValue = 6.721620e-01)
Components of the Score Function:
Profile Score...............................................: -16.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.23
Term 4 Volume Compensation (-1, 1, 2).....................: -4.69
Term 5 Volume Compensation (-1, 2)........................: -3.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0280 (length 60 amino acids):
MREAICIHIG QAGCQVGNAC WELFCLEHGI QPDGSMPSDK CIGVEDDAFN TFFSETGAGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.88 (PValue = 5.532048e-01)
Components of the Score Function:
Profile Score...............................................: -13.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0180 (length 60 amino acids):
MCALPVMEGA RGSTLQVCGE RHTMSLSLAT ALYADATRLY RLGDLHHARG AAEEALLSLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -44.35 (PValue = 1.749982e-01)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.78
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.23
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0160 (length 60 amino acids):
MSAGDTPVSL FLQACNQEGV KTPNPKLVEF FQSHETFDSI LEIDLSNNYI GNRGLLAVLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -23.54 (PValue = 3.104592e-02)
Components of the Score Function:
Profile Score...............................................: -10.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0030 (length 60 amino acids):
MAEPRIKQLR CAATEVPEDQ RNHLQHLYES IEQLSRRCRH LENASERKSV VIEDLRAHVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -44.02 (PValue = 1.709421e-01)
Components of the Score Function:
Profile Score...............................................: -0.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.18
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1380 (length 60 amino acids):
MVQPEQHIVY AIHEYAIPGS GFLRLKAGDI IHVDEADASG WWLGTNLRGQ KGVFPSTYTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -50.85 (PValue = 2.669906e-01)
Components of the Score Function:
Profile Score...............................................: -7.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1100 (length 60 amino acids):
MIGEFFLLLT AGLALYGWYF CKSFNTTRPT DPPVVHGAMP FVGHIIQFGK DPLDFMLNAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -67.90 (PValue = 5.933441e-01)
Components of the Score Function:
Profile Score...............................................: -17.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1000 (length 60 amino acids):
MDTVKHVYYF GGSKADGNRD MKMLLGGKGA NLAEMVNIGI PVPPGFTITT KVCAAYQQSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -52.62 (PValue = 2.964728e-01)
Components of the Score Function:
Profile Score...............................................: -14.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.32
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0970 (length 60 amino acids):
MSSKTPKLFN KWSFEGLETS ELALRDHIST TAAYVPHTSG RWQKRRFYKA RMPIVERLAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -64.63 (PValue = 5.279929e-01)
Components of the Score Function:
Profile Score...............................................: -8.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -6.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.19
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0890 (length 60 amino acids):
MTPLPQQPPT PPAASPYITP ESKEKGDAGI YAALDAMQLS RALHGVTSSR LDQQQLQQVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -51.39 (PValue = 2.758369e-01)
Components of the Score Function:
Profile Score...............................................: -2.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.45
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0740 (length 60 amino acids):
MSTSRDDAAG EACLLPPHGP ANMMSTYMTR YDYDYNRDPS LTGSDGGSGG GFEQEISGEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -44.88 (PValue = 1.815357e-01)
Components of the Score Function:
Profile Score...............................................: -3.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0720 (length 60 amino acids):
MPPKRYPNRL LVLCASINDV TAWPFWKFLQ MKKIRGVTDM ALLAFNSDGG SFEARIDGDK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -72.43 (PValue = 6.787799e-01)
Components of the Score Function:
Profile Score...............................................: -3.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.66
Term 14 Hydrophobicity of Tail [26..end]...................: -2.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0710 (length 60 amino acids):
MTLIDQHETT VQQVIDKIDF LRGEREARYT EFKQETQQRE AELQHLRNER SDLSLQVQEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.40 (PValue = 6.225433e-01)
Components of the Score Function:
Profile Score...............................................: -16.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0520 (length 60 amino acids):
MYTFTISGAY GIEEAVMGGG VLLTIVSIVV IPVIMGAPIV LVVAELAAAV PSNAGFLMWI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -33.53 (PValue = 7.632561e-02)
Components of the Score Function:
Profile Score...............................................: -2.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0510 (length 60 amino acids):
MPTAFVGVSA VPPLERQKQR LANMDPSVYT VFEECRYKSL LAICHLARLI DAAIRGPDES
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -75.89 (PValue = 7.373380e-01)
Components of the Score Function:
Profile Score...............................................: -26.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.62
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.12
Term 14 Hydrophobicity of Tail [26..end]...................: -2.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0380 (length 60 amino acids):
MFKKKISSLT TTVASAAAAT TATAKVKATT SAHTPVKRGS KAKTLALIEK HRKILDEARR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -76.04 (PValue = 7.397761e-01)
Components of the Score Function:
Profile Score...............................................: -7.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -56.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0360 (length 60 amino acids):
MVALPAFKFV FLAIRQVTRP VAKQIVSRAN TKRALTYCVC MGLGRVSLGL SGVIAEWTRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -34.88 (PValue = 8.535417e-02)
Components of the Score Function:
Profile Score...............................................: -2.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.72
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.54
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0280 (length 60 amino acids):
MRDSPMPPPR PAPWAKGGGS VRLRHSFSIR TILAGAPLTT PSVTSDATSR IQDKEVRLLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -40.81 (PValue = 1.355904e-01)
Components of the Score Function:
Profile Score...............................................: -4.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.54
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0270 (length 60 amino acids):
MFYDVNKGYV TRVAVVFATA FGMSYAVYKL VLQPMQQRRP LAKRWCWCAP PVPITLVEKN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -64.07 (PValue = 5.166819e-01)
Components of the Score Function:
Profile Score...............................................: -25.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -1.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0050 (length 60 amino acids):
MEYLLPVETC FRCGHRYAFR LSRFGCVFSC ACDECIDVLK VAAVFSAAVR GRTAAVPFVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -34.73 (PValue = 8.427527e-02)
Components of the Score Function:
Profile Score...............................................: 6.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2460 (length 60 amino acids):
MREENNVPAE WAPRDTHRLD PLQLLPPSQR HCGQSSAAES GQGCHSPSRG KPEVHSTRVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.84 (PValue = 3.540251e-01)
Components of the Score Function:
Profile Score...............................................: -3.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2400 (length 60 amino acids):
MPVCIECGHG VPRIIKPDTE TVERCGMCGR ICDICYEFGD VQIWIDVVLL RHRAWAHVLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -58.29 (PValue = 4.008521e-01)
Components of the Score Function:
Profile Score...............................................: -14.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.00
Term 4 Volume Compensation (-1, 1, 2).....................: -3.00
Term 5 Volume Compensation (-1, 2)........................: -3.26
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2360 (length 60 amino acids):
MGRTNAKKQE AREERLSKLP QSDRLTKIAI IKKKEGRVLD AAEKHALKMS SEHGEILRLW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -55.84 (PValue = 3.541380e-01)
Components of the Score Function:
Profile Score...............................................: -9.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2320 (length 60 amino acids):
MEAAATPEAN PAALALRKVH PAARWVAGLF SPMSLRDQGY CADMFQCILW GSLAVSFPVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -9.08 (PValue = 6.235787e-03)
Components of the Score Function:
Profile Score...............................................: -4.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.70
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2290 (length 60 amino acids):
MQTATAPFIL RSLYKDAYIS DMQIARPITE LMMNTIGAQL TNKYDTHIPA IACSLYTLFS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -41.99 (PValue = 1.479039e-01)
Components of the Score Function:
Profile Score...............................................: -10.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2280 (length 60 amino acids):
MPLTAPPRRH GNIKVFLNGR IFVGPDWRIM TLSVVLISVC SLVFVFFTNE IVAARITVGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -39.73 (PValue = 1.250561e-01)
Components of the Score Function:
Profile Score...............................................: -7.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.36
Term 4 Volume Compensation (-1, 1, 2).....................: -1.21
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2235 (length 60 amino acids):
MWCGTPVEAA VLPGEVAHLY SRARQGGILF HLGEDVPTPP PQISSSSFLC LSTCVYACVW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -38.04 (PValue = 1.098363e-01)
Components of the Score Function:
Profile Score...............................................: 1.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.46
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2220 (length 60 amino acids):
MPRQPTKNRI NMHDIVEQPL SAIPDAVDAV LRRPEPLDEL EVQSIFFESS YILLRAEEAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.69 (PValue = 2.336529e-01)
Components of the Score Function:
Profile Score...............................................: -17.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.71
Term 4 Volume Compensation (-1, 1, 2).....................: -0.86
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2200 (length 60 amino acids):
MSSYEIQPIV KGTKRDPSLR KYNKAAGAGP FGAAPASLRT KKSALAQSAA APPGEAVDAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -50.72 (PValue = 2.650123e-01)
Components of the Score Function:
Profile Score...............................................: -6.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2140 (length 60 amino acids):
MFARSAIRRW VNKDTKVIVQ GMTGKAGTFH TKEAMAYGTK VVGGVSPKKA GTTALGVPVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -11.99 (PValue = 8.950156e-03)
Components of the Score Function:
Profile Score...............................................: -2.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.15
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0920 (length 60 amino acids):
MQKQQQSFTM LQRAPRDGGS DSHVEACVGQ TPESCGVLLK GSRSLSPAPC FPSDSISPSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -40.90 (PValue = 1.364659e-01)
Components of the Score Function:
Profile Score...............................................: 4.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0890 (length 60 amino acids):
MKRLSSHHAI VCGAASATAA STRFGDVVGG GSSCTATSPL FAAQRGRFYR PLVNQGINLW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -46.83 (PValue = 2.070974e-01)
Components of the Score Function:
Profile Score...............................................: -11.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2090 (length 60 amino acids):
MMRKTSVCAI AATRRALVGN GPTFHTGGDN NNISDIQNAF PMNERGIRSS SPFPEPNTAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -42.60 (PValue = 1.545236e-01)
Components of the Score Function:
Profile Score...............................................: 5.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1960 (length 60 amino acids):
MPPPTHTDFF SFLDSPITER SIAKGKAALL AHAYTNTRKL ENRLTPLTAL SISTKEDAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -75.29 (PValue = 7.277114e-01)
Components of the Score Function:
Profile Score...............................................: -16.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.00
Term 4 Volume Compensation (-1, 1, 2).....................: -2.40
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.86
Term 14 Hydrophobicity of Tail [26..end]...................: -2.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1900 (length 60 amino acids):
MFSPRTHAHT HTHNCKIPSS SRSSLIAAHG SLPRSLPRTS AAKRIIASAP VRRNGMINMQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -71.40 (PValue = 6.601162e-01)
Components of the Score Function:
Profile Score...............................................: -5.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.76
Term 14 Hydrophobicity of Tail [26..end]...................: -3.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1890 (length 60 amino acids):
MMGSLFVEKC TPQLYTQGAP QQHTTARMSS SVRDPPQATT CSTATPEHPV VELQPALRQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -45.13 (PValue = 1.845831e-01)
Components of the Score Function:
Profile Score...............................................: -0.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.76
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1690 (length 60 amino acids):
MLAQCSLFVQ PRVFKGLVMR SHAPVACWAA SLPWMTQQQR RRSSFASATP AAPSTDAGKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.32 (PValue = 3.629970e-01)
Components of the Score Function:
Profile Score...............................................: -3.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.71
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1450 (length 60 amino acids):
MLWWTARLLF GAGGTQGGVK KLSAVKAEYC DWALKENTRA LIGSIHHPLV TEYLIRLHEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -66.56 (PValue = 5.669642e-01)
Components of the Score Function:
Profile Score...............................................: -17.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.69
Term 4 Volume Compensation (-1, 1, 2).....................: -0.95
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.85
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1445 (length 60 amino acids):
MSAQDRARPQ SGTAVEEEPN KQAPESLFQR CVRKWMGFSD YLSTSLLGGP RCIKLAHVIN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -41.16 (PValue = 1.391050e-01)
Components of the Score Function:
Profile Score...............................................: -5.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1310 (length 60 amino acids):
MGPRKSNAFA SGKDDGAAAG KVRKVGGNGV GGSSATNSGS HKHGGAAAAT MADIYTNEER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -71.12 (PValue = 6.549680e-01)
Components of the Score Function:
Profile Score...............................................: 0.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.24
Term 14 Hydrophobicity of Tail [26..end]...................: -3.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1290 (length 60 amino acids):
MLPRSLPFRC WHLFSCFCPA PIPSPIPLLR TRTHAPCNPF SLVLLCSLTL FHSPCKKCSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -55.79 (PValue = 3.531620e-01)
Components of the Score Function:
Profile Score...............................................: -11.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.16
Term 4 Volume Compensation (-1, 1, 2).....................: -4.51
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.76
Term 14 Hydrophobicity of Tail [26..end]...................: -4.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1200 (length 60 amino acids):
MTSARSYPPL YPAGVFVVRS KQELAPLVAR LRAARRLKPG RNVTVFDGEH FAEVADALEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.30 (PValue = 2.743648e-01)
Components of the Score Function:
Profile Score...............................................: -8.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.82
Term 4 Volume Compensation (-1, 1, 2).....................: -3.22
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1140 (length 60 amino acids):
MPKGPRTAEV SRRLVDAYVT TLRQHLPTYC IRQLDKLPRA EEHQLTRLRQ SYPGTPAELL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -71.17 (PValue = 6.558546e-01)
Components of the Score Function:
Profile Score...............................................: -22.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.00
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -2.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1030 (length 60 amino acids):
MHLDQVLAAA TVAKAHAHIN KHQCALAVRR LRLIALTLRQ MPRPAPSQLL LTAIQSLCLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -25.11 (PValue = 3.609028e-02)
Components of the Score Function:
Profile Score...............................................: -16.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.03
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0960 (length 60 amino acids):
MPREIITLQA GQCGNQVGSE FWRQLCLEHG IRLDGVVEPY AVGGEDRKDV FFYQADDDHY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -105.87 (PValue = 9.740806e-01)
Components of the Score Function:
Profile Score...............................................: -18.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.50
Term 14 Hydrophobicity of Tail [26..end]...................: -4.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -28.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -71.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0760 (length 60 amino acids):
MACLSEPSFL LRHIRRCGAD EPRQTSQHTT ASTTGATSDS SYTTEVFLKV GVPASFVPAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -24.19 (PValue = 3.304662e-02)
Components of the Score Function:
Profile Score...............................................: -3.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0660 (length 60 amino acids):
MLRRTCASRG HATSNLFAPP HSGRWFNPPH QWTMSDTFVP AFFLGFSPMA ICVYLYHAAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -58.93 (PValue = 4.133133e-01)
Components of the Score Function:
Profile Score...............................................: -5.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.29
Term 4 Volume Compensation (-1, 1, 2).....................: -2.68
Term 5 Volume Compensation (-1, 2)........................: -2.53
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0590 (length 60 amino acids):
MSPSAAPTRG TPDSCRCCHD TTRSSPLLGH VSACCLNDSC ESTAHRNSAC LLFQSGVSSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -31.14 (PValue = 6.227556e-02)
Components of the Score Function:
Profile Score...............................................: -11.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0550 (length 60 amino acids):
MTGTQAAHAG GAANSRRGVS QRTSTAAAFS PSSNMRPAVA HPTAVDAAAK QRAQRRLRAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -64.67 (PValue = 5.288619e-01)
Components of the Score Function:
Profile Score...............................................: -7.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.13
Term 14 Hydrophobicity of Tail [26..end]...................: -2.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0170 (length 60 amino acids):
MLRASAGSIQ FTPVYECTTP NAPYAYLVDI DGVRILFDCG WNDEFDTSFL NKLKPHLPTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -43.15 (PValue = 1.607758e-01)
Components of the Score Function:
Profile Score...............................................: -5.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.75
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.24
Term 9 Volume Limitation [3..8]...........................: -2.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3990 (length 60 amino acids):
MRKSTSVYTL RSHRCFITLR AVIPILIFIC LCGAVGTIFL TSSHQSALGW TREPTTSAPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -56.19 (PValue = 3.606196e-01)
Components of the Score Function:
Profile Score...............................................: 0.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3930 (length 60 amino acids):
MCIQDPGGDN KGAMELDTMS LSQLYATGYR MYRKKHQPDS KQNFTLPTSP PDFDGDAPID
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -64.06 (PValue = 5.165689e-01)
Components of the Score Function:
Profile Score...............................................: -10.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.33
Term 4 Volume Compensation (-1, 1, 2).....................: -3.75
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3850 (length 60 amino acids):
MRTAVGSGAG ASAAARAIPT AVPLTVADID ALARRDGVVS SDAVVSQQGT VASSRSVAEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -26.07 (PValue = 3.949854e-02)
Components of the Score Function:
Profile Score...............................................: 1.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3000 (length 60 amino acids):
MANGYSILGV PVDVSIWTLM MIITALVVLA GLMAGLIISV FSLDKDRLKV LAQRSETVEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -82.35 (PValue = 8.274994e-01)
Components of the Score Function:
Profile Score...............................................: -27.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.02
Term 14 Hydrophobicity of Tail [26..end]...................: -3.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3700 (length 60 amino acids):
MLRTLEGAAV EFDVDRQASA DRVIIRNRLT PITAESYRQR PPVDFLSPAM LSWAGPRAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -62.47 (PValue = 4.842236e-01)
Components of the Score Function:
Profile Score...............................................: -14.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3690 (length 60 amino acids):
MSSDTSPPGG YRPPLQAAAS IPSSIADVGR KNSSSPLRSC GLADAASMWD ETRSVSSSVR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.41 (PValue = 4.627846e-01)
Components of the Score Function:
Profile Score...............................................: -6.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.59
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3660 (length 60 amino acids):
MRSAVTCIKS PGAALFTDTA TCRTITLSRP DALNVMSLPM VQDLHRLYIT EPHPNEDAVY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -94.63 (PValue = 9.312472e-01)
Components of the Score Function:
Profile Score...............................................: -23.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.02
Term 4 Volume Compensation (-1, 1, 2).....................: -3.51
Term 5 Volume Compensation (-1, 2)........................: -3.76
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -66.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3610 (length 60 amino acids):
MAPPKASLPA RIFAGDFMGI NWNRVSWMAP YNNFYPITMC GGWGGRMWSS FIQYGRFDNR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -72.38 (PValue = 6.778522e-01)
Components of the Score Function:
Profile Score...............................................: -8.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.86
Term 14 Hydrophobicity of Tail [26..end]...................: -4.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3512 (length 60 amino acids):
MDAPVNVFLR FGLSHSERLN HLLERVGTAQ AAFRIVGPRQ QEGVARTPAH PHDGADCARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.74 (PValue = 4.493134e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3500 (length 60 amino acids):
MDAPVNVFLR FGLSHSERLN HLLERVGTAQ AAFRIVGPRQ QEGVARTPAH PHDGADCARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.74 (PValue = 4.493134e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3490 (length 60 amino acids):
MLRKCPLRRW RPEKRLPLRF RDVPEEFTDL RTADSRPVLF TAKRPAPLRD VTRLSDVLLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -48.29 (PValue = 2.276786e-01)
Components of the Score Function:
Profile Score...............................................: -18.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.07
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3340 (length 60 amino acids):
MLNKVIQDIY HLRRVHAVLP DAVLGDTLKN KLLRLSLQPS LQELKHRAQQ ACVSAHEDNQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -101.60 (PValue = 9.616815e-01)
Components of the Score Function:
Profile Score...............................................: -22.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.63
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.72
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3240 (length 60 amino acids):
MPRIQLQSVN HFSAWLHDEI LTEVPFGLSL RLRPLPMQGS TAVSGGGFVL ARPHVGHVIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -30.27 (PValue = 5.776008e-02)
Components of the Score Function:
Profile Score...............................................: 1.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.28
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.40
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3150 (length 60 amino acids):
MASMVRHYSL SNPPPVEGAL DGRETVHEAE ILEVQALQAE RDGECGRGVL LMERALQIRC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -54.81 (PValue = 3.351223e-01)
Components of the Score Function:
Profile Score...............................................: -6.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.35
Term 4 Volume Compensation (-1, 1, 2).....................: -1.20
Term 5 Volume Compensation (-1, 2)........................: -3.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.93
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2890 (length 60 amino acids):
MEERGDALMA EAEKQLKKRS WFSSSDAKVD EAHDTFLQAA TQYKAAGNFA KVAQAYKRAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.15 (PValue = 4.375932e-01)
Components of the Score Function:
Profile Score...............................................: -1.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.47
Term 14 Hydrophobicity of Tail [26..end]...................: -2.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2880 (length 60 amino acids):
MKPGPSPNSP HLELGSSETA PRFSSKPSFS EALLLSAKAC APSVQPTSTP TRSPPGEVAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -56.99 (PValue = 3.757270e-01)
Components of the Score Function:
Profile Score...............................................: -12.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2830 (length 60 amino acids):
MNVLALSGES DFHSRGAGGQ SYAETVNANP TSSSSRSSPR MEVHETNNAG EFVVAPAAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -48.64 (PValue = 2.328208e-01)
Components of the Score Function:
Profile Score...............................................: -6.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2810 (length 60 amino acids):
MAKGTVKRKA TPSSLRKKKA QQRIRKQIRT KLQKKKPSWK TALAKVYTGG DTTLKDKKKD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -81.00 (PValue = 8.108018e-01)
Components of the Score Function:
Profile Score...............................................: -5.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.66
Term 14 Hydrophobicity of Tail [26..end]...................: -3.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2760 (length 60 amino acids):
MSRPSALRKP LLYTPASSTG RPASSPRRRQ RQPLQPRGSA STIADSPRRL ISYYLSKAAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -44.35 (PValue = 1.749175e-01)
Components of the Score Function:
Profile Score...............................................: -5.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2750 (length 60 amino acids):
MEPEPPPELV QRALAACRVV LHEVSRRVES TVPNAAAKAE LLDGVKAAES AVARSERLFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -57.19 (PValue = 3.795313e-01)
Components of the Score Function:
Profile Score...............................................: -6.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.94
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.81
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2710 (length 60 amino acids):
MTKFLKPGKV VIVTAGRYAG HKAVIVQNSD VVTKERPYGR ALLAGIKKYP KKVVRGMSKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -68.03 (PValue = 5.960558e-01)
Components of the Score Function:
Profile Score...............................................: -22.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.84
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1920 (length 60 amino acids):
MSRVPISEEQ AQQMVAKQQA QQERMEALEE QKENMLRAFV SAEGRERLKR IAQVKAGRSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -66.59 (PValue = 5.675743e-01)
Components of the Score Function:
Profile Score...............................................: -12.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.22
Term 14 Hydrophobicity of Tail [26..end]...................: -2.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2600 (length 60 amino acids):
MVMAGKEDAA AAYCANLAAA YERLAHVLAV PLIDQELYSC LFLHPLLHEH CAEARGFSVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -86.99 (PValue = 8.761289e-01)
Components of the Score Function:
Profile Score...............................................: -25.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.21
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.10
Term 9 Volume Limitation [3..8]...........................: -1.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1690 (length 60 amino acids):
MTYVYRFVPV SRWYRLLTPK IILSDSIAGF IVGVMIVPTC LSWSSLAGLP FSCGLIAALV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -15.63 (PValue = 1.364838e-02)
Components of the Score Function:
Profile Score...............................................: -6.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.45
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.58
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2570 (length 60 amino acids):
MREARSPARV SAPMDATVAN SKETEASHTG EDAACERLYR NATKQAEQRE RGLQALREAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.50 (PValue = 3.117757e-01)
Components of the Score Function:
Profile Score...............................................: -7.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1710 (length 60 amino acids):
MSERGTKVTA SPSARCRGGY PAAGEVAAAE AGYAVAKAES LVAEAAELMA SAAPPRRKLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -72.11 (PValue = 6.729952e-01)
Components of the Score Function:
Profile Score...............................................: -9.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.10
Term 14 Hydrophobicity of Tail [26..end]...................: -2.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2490 (length 60 amino acids):
MDERKDKYEQ LLAKVDWHAP HPPKGYQYGA GRGAKGFITT AELTTGVNTT AKMTRDENDF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -95.20 (PValue = 9.343190e-01)
Components of the Score Function:
Profile Score...............................................: -6.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.74
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.52
Term 14 Hydrophobicity of Tail [26..end]...................: -5.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -76.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2380 (length 60 amino acids):
MEGYALGNGI QGADPPGGAG VWSSGAPTPL SFTPPLVSAV HLPCAPPAAV SSPTSNNGFG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.66 (PValue = 3.507863e-01)
Components of the Score Function:
Profile Score...............................................: -5.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.99
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2280 (length 60 amino acids):
MLRTTHVSWA STAKGYMNRV MVYAHRRRKA RYLAPKNAHV RSPLAHKMPE EYGNTWDPRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -85.91 (PValue = 8.659932e-01)
Components of the Score Function:
Profile Score...............................................: -14.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.61
Term 4 Volume Compensation (-1, 1, 2).....................: -4.68
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.30
Term 14 Hydrophobicity of Tail [26..end]...................: -4.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2270 (length 60 amino acids):
MWSFLNDVRE SVRQVVAPPP SRSSIASTTT TATSTTANTR EMGFEEAVDQ LTTGLLYLWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -28.96 (PValue = 5.140149e-02)
Components of the Score Function:
Profile Score...............................................: -7.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2170 (length 60 amino acids):
MNPTVPRGTE WGLVHCDFFH HARANTSRLL VSHRTTDTVG QMLMSLKDGL LTSAPSKKPH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -74.14 (PValue = 7.085136e-01)
Components of the Score Function:
Profile Score...............................................: -9.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -3.42
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.17
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -4.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2160 (length 60 amino acids):
MFSRTQDAGG ADSGVILPFR MGGKSTVVMS DYHICKYDAI LGVLVCIGDD ASVLVLGKEM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -44.86 (PValue = 1.812306e-01)
Components of the Score Function:
Profile Score...............................................: -14.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.98
Term 4 Volume Compensation (-1, 1, 2).....................: -4.02
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2090 (length 60 amino acids):
MSSITGAAYS SPEYTHCIRD SRFRHNVYEP EADTFLFLDA LDKDAELLRS IRPDRCVEVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -67.56 (PValue = 5.867788e-01)
Components of the Score Function:
Profile Score...............................................: -16.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.42
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1840 (length 60 amino acids):
MDTLTHLSHT LREAMSDIVP ESHPEHPFNL IPELCRKFYD LGWATGTGGG ISIKMGENYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -71.70 (PValue = 6.655907e-01)
Components of the Score Function:
Profile Score...............................................: -2.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.98
Term 14 Hydrophobicity of Tail [26..end]...................: -2.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1770 (length 60 amino acids):
MGTHVSKVKS VNMDAWAEST MLVAESIGNA RGRLLYEYNM PPSARVTNTT ETAVAERVIR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -42.49 (PValue = 1.533543e-01)
Components of the Score Function:
Profile Score...............................................: -10.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1730 (length 60 amino acids):
MVQGLSSAKA VLALLSEAEN LVVLFALKRL SSLMDTFWHE VSAKLPLIEE LAASEKLADE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -40.98 (PValue = 1.373135e-01)
Components of the Score Function:
Profile Score...............................................: -11.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.54
Term 4 Volume Compensation (-1, 1, 2).....................: -2.04
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1590 (length 60 amino acids):
MESLQMRWVE CPLLDAANLV LHSPSSSEDD DDDDPIDLLN RREGHCSAVV YPATPIDMSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -55.26 (PValue = 3.433113e-01)
Components of the Score Function:
Profile Score...............................................: 1.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1560 (length 60 amino acids):
MDIPLRLRLA YANYLGEVYC DRKPVRCDAQ PPSRHSPYTG KGAESDGRHW LSSLVASVGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -7.62 (PValue = 5.152201e-03)
Components of the Score Function:
Profile Score...............................................: -3.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1520 (length 60 amino acids):
MADNEVDVIL QNYFAAIAEK DSDALKLYED NKRMRRLVEQ TLKAREELEA QHCTTQLLVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -53.25 (PValue = 3.073571e-01)
Components of the Score Function:
Profile Score...............................................: -23.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.58
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1515 (length 60 amino acids):
MAPKAQPDRM AGGPSSSSKS TTDPMLQGAY EQDESNDLEG STEEIAAFEA RLQQQQQQHG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -84.14 (PValue = 8.477659e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.96
Term 14 Hydrophobicity of Tail [26..end]...................: -5.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1510 (length 60 amino acids):
MVSIPLLYSG VLGFTGVVAG AVGSHALKAK TAEERNAFII GSQYQLMHSI AALGAIGLSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -10.15 (PValue = 7.139274e-03)
Components of the Score Function:
Profile Score...............................................: -4.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.24
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1210 (length 60 amino acids):
MQYHVQLALA PSCAASDFDG GDGVSGTASS PSLVASPSST SAQANSSPAH HQQSDSGSGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -66.31 (PValue = 5.619498e-01)
Components of the Score Function:
Profile Score...............................................: -1.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1130 (length 60 amino acids):
MASSRNRSPS SPSTESSYES QQDQCQQQES YRTEHLETQA RSDSDMQKAA RQHRAGSSVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -65.22 (PValue = 5.399954e-01)
Components of the Score Function:
Profile Score...............................................: -6.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0835 (length 60 amino acids):
MNELEYFVLS THGKRCDIMR YMQQLRDLDE WIEYHLSHLR SIAAERVAYQ KAQARQKQSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -89.64 (PValue = 8.984022e-01)
Components of the Score Function:
Profile Score...............................................: -20.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.99
Term 14 Hydrophobicity of Tail [26..end]...................: -3.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0780 (length 60 amino acids):
MGYDMSIYIF GGLVTTGLFE VGGDVDFVGI LDVEPGFAEA GEILRRSSSE LRRLGLRSRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -57.39 (PValue = 3.833382e-01)
Components of the Score Function:
Profile Score...............................................: -21.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0710 (length 60 amino acids):
MSTMASELEQ AQAILASERR SLGLIHRPLR TTLLFLSYSI QGTVHYTEVA LSRPLFNTVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 22 had the best score.
Total Score.................................................: -42.89 (PValue = 1.578388e-01)
Components of the Score Function:
Profile Score...............................................: -5.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -28.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.56
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0575 (length 60 amino acids):
MSRTKETARA KRTITSKKSK KAPSAVSGVK MSHRRWRPGT CAIREIRKFQ KSTSLLIQCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.47 (PValue = 3.111189e-01)
Components of the Score Function:
Profile Score...............................................: -12.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0970 (length 60 amino acids):
MAVAYPSEED ESVLVGFTEF FTQQEGVHAL LRITEQDVQT VRSACSSVLA HLSSTSRLIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -19.90 (PValue = 2.156132e-02)
Components of the Score Function:
Profile Score...............................................: 5.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.08
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0930 (length 60 amino acids):
MGFRESKPKL SQTAEKPEKS QITPSDKARL QLKLQRDNVQ AAIRKYERVA LLEHEKAKEF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -103.10 (PValue = 9.664821e-01)
Components of the Score Function:
Profile Score...............................................: -26.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.50
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.72
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.00
Term 14 Hydrophobicity of Tail [26..end]...................: -4.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0880 (length 60 amino acids):
MHGFLVHGQA SRGLMSAEVK KGYTGCRSYL MSAEDLGKGG RLTHSEILIA NEAIIKQRRE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -88.37 (PValue = 8.882511e-01)
Components of the Score Function:
Profile Score...............................................: -16.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.49
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0790 (length 60 amino acids):
MVQRSALVRL ACLVAVLYSS CLSAPLSSTI AAAAPAAARD TAISSRHNTS VTAASPSPLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -37.98 (PValue = 1.093283e-01)
Components of the Score Function:
Profile Score...............................................: -0.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0710 (length 60 amino acids):
MFPIFFFLSS VTMQSRQYCR TPQPPPQQPW CSSAGAGVPK PDAYAAFTSS SSLLPSPALT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -29.95 (PValue = 5.612177e-02)
Components of the Score Function:
Profile Score...............................................: -11.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.40
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.18
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -14.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0690 (length 60 amino acids):
MSLALLPMVL RKDDSLVLAV YNEQAASLTE LNGEANRYTG DYRECEVAFN PARPTCFAHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -66.49 (PValue = 5.655321e-01)
Components of the Score Function:
Profile Score...............................................: -10.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.35
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.96
Term 14 Hydrophobicity of Tail [26..end]...................: -2.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0640 (length 60 amino acids):
MVPLLFHSSP LPSPLPPLDP ISLLPTDTDK DVLLRPHSRW LVRKDRTRIF LMQSARVALP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -54.33 (PValue = 3.264028e-01)
Components of the Score Function:
Profile Score...............................................: -4.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.79
Term 4 Volume Compensation (-1, 1, 2).....................: -4.81
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -3.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0490 (length 60 amino acids):
MKCCRVFVFV LLMLFTACAT CSILFPVFRK VVAGTDTTNT VYFWYRQSST PAKETPDVEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.68 (PValue = 3.327274e-01)
Components of the Score Function:
Profile Score...............................................: 2.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0460 (length 60 amino acids):
MVHSYGYKSG TRHLFAKKFR KHGVPSVSTI LTNIKVGDYV DVVADSAVRE GMPHKYYHGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -68.26 (PValue = 6.003786e-01)
Components of the Score Function:
Profile Score...............................................: -4.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.16
Term 14 Hydrophobicity of Tail [26..end]...................: -4.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0440 (length 60 amino acids):
MNVSFLFSLP CNLAEFKGAA KLLADAAALP LRECGAKGGV AVPGLFCGCD PEGRPLGSGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -62.45 (PValue = 4.839694e-01)
Components of the Score Function:
Profile Score...............................................: -4.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.48
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0400 (length 60 amino acids):
MAPERCFPHG FLRRLQRATF LFFSMLAALY ATTSLYYVVR ISVVEEPDLY HQIGSNVKGF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -79.95 (PValue = 7.970483e-01)
Components of the Score Function:
Profile Score...............................................: -20.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.44
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0390 (length 60 amino acids):
MGLLGLRKFI DSCGCTRLLP LPLSDAEAAE EVKRRLRVEG YYEITGEDAD ADSGALYTNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -69.18 (PValue = 6.183498e-01)
Components of the Score Function:
Profile Score...............................................: -11.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.99
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0260 (length 60 amino acids):
MKQGKSTMER LRDASHVSDL PTIIKLIMKR NIDIKKPDAH GRTSLHYACM NDNKVLISYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -35.74 (PValue = 9.149721e-02)
Components of the Score Function:
Profile Score...............................................: -9.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.18
Term 4 Volume Compensation (-1, 1, 2).....................: -2.86
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0220 (length 60 amino acids):
MEHALLQVVH LYPPKTLLRY DSAAHTEKLR HQPHLYAASS CEDCEIVATD EQVGAYTDLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -47.60 (PValue = 2.177942e-01)
Components of the Score Function:
Profile Score...............................................: -16.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0140 (length 60 amino acids):
MPKNMGKGGK SFKAGNSKGN MQNQKRDLTY ANPDEGEEYA QVKKALGNLR LELQLAGGST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -45.24 (PValue = 1.859802e-01)
Components of the Score Function:
Profile Score...............................................: -7.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0110 (length 60 amino acids):
MPEEVVLMMD LKGVLTSSPF PAARRLAENM MRCVFERASS HIIVKRIQER PVPFLAKKYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -68.13 (PValue = 5.978601e-01)
Components of the Score Function:
Profile Score...............................................: -11.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.17
Term 9 Volume Limitation [3..8]...........................: -2.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.00
Term 14 Hydrophobicity of Tail [26..end]...................: -1.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2630 (length 60 amino acids):
MLRRCLAQAS TALRCGSTAA LAAPFAPFGC GATRTAAVDA VACSRLASST AAYPTLRTSC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -41.74 (PValue = 1.452286e-01)
Components of the Score Function:
Profile Score...............................................: 0.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2490 (length 60 amino acids):
MRMRPFTAST AATPTAAGAA PASSMSSPAP LRKARESATG SAGSYFLGSS TFSVYEEMAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.56 (PValue = 3.676299e-01)
Components of the Score Function:
Profile Score...............................................: -0.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.22
Term 14 Hydrophobicity of Tail [26..end]...................: -2.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2470 (length 60 amino acids):
MGRTAEAIAP SKGHFRHHYS LSDEIGKGAY AVVFRCIHRE TKAVYAVKIV DKRKAGPKDI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -94.35 (PValue = 9.296983e-01)
Components of the Score Function:
Profile Score...............................................: -18.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.36
Term 4 Volume Compensation (-1, 1, 2).....................: -2.15
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2210 (length 60 amino acids):
MPPKVSKLPP QRRDTAHHLP DDDINLFFRV LRFLSAHPHL ATLDTATVRL DGADHSPSTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.14 (PValue = 6.366140e-01)
Components of the Score Function:
Profile Score...............................................: -13.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.09
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.05
Term 14 Hydrophobicity of Tail [26..end]...................: -3.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2240 (length 60 amino acids):
MEGRWPPTLV TSPVHVYTSE VARGSSHPCW SAIPPGQLNA YDTATQVELA FYYTAACLSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.86 (PValue = 4.120587e-01)
Components of the Score Function:
Profile Score...............................................: -12.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.74
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2440 (length 60 amino acids):
MRAPNAHPHS PCALYSLPLL LTASFLQLQR HQWDARDRDT HAQISVSLKP HNMVWNVRGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -72.07 (PValue = 6.722958e-01)
Components of the Score Function:
Profile Score...............................................: -10.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.90
Term 4 Volume Compensation (-1, 1, 2).....................: -1.22
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.98
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.47
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2430 (length 60 amino acids):
MMSEASTSVD GEEAMPLPER FQQLRHSLHG HWGTSAEADL LRAMQQLHTR LVARSAQTHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -65.77 (PValue = 5.511473e-01)
Components of the Score Function:
Profile Score...............................................: -15.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.67
Term 9 Volume Limitation [3..8]...........................: -0.76
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.51
Term 14 Hydrophobicity of Tail [26..end]...................: -3.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2350 (length 60 amino acids):
MPISSSLVAF ERVIIAEDSV SPSVAPALQK MLSLLPRHDA KVSYQLEQDV FHFFIENDIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -75.20 (PValue = 7.261573e-01)
Components of the Score Function:
Profile Score...............................................: -27.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2337 (length 60 amino acids):
MDTDLLLTLS SFCRVRMQAR PVFFTESRTF VDDVDTFIKY WQRSRSEQTA TLLAFLKVVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -27.21 (PValue = 4.387436e-02)
Components of the Score Function:
Profile Score...............................................: -1.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.58
Term 4 Volume Compensation (-1, 1, 2).....................: -4.64
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2130 (length 60 amino acids):
MVTSALTAVS SASGAGAGTA TTESMHMVKE ASLHNTWAAN FNNTETLRET VSTSNGAYTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -66.98 (PValue = 5.752381e-01)
Components of the Score Function:
Profile Score...............................................: -17.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1940 (length 60 amino acids):
MQVNSLLERM RKVRQEKAAA AAAAAATATA AAPLAVTNAT ATVPAANAAS RDAPVSSAAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -49.27 (PValue = 2.423764e-01)
Components of the Score Function:
Profile Score...............................................: -1.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.15
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.77
Term 14 Hydrophobicity of Tail [26..end]...................: -1.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1930 (length 60 amino acids):
MSAHNPKAVA AIPVAVIPPG IRRATLSMEA HERNHLAIGM GGEKYLVVHP TYSLAPHLYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -55.13 (PValue = 3.408924e-01)
Components of the Score Function:
Profile Score...............................................: -10.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.17
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1910 (length 60 amino acids):
MAEPITNENL QILLTKLMTD RFCSQESSDL DACIQNFVPQ HIDGSYVDQS LQRRGIRRCK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -78.80 (PValue = 7.812219e-01)
Components of the Score Function:
Profile Score...............................................: -17.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.16
Term 14 Hydrophobicity of Tail [26..end]...................: -3.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1840 (length 60 amino acids):
MGNRVSTAAA PFSLEDLEAL ARAPSLFDTL PNDAGNSAGS GASVLFRKEI IAEMERQYAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -85.96 (PValue = 8.664837e-01)
Components of the Score Function:
Profile Score...............................................: -11.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -1.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.68
Term 14 Hydrophobicity of Tail [26..end]...................: -5.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1805 (length 60 amino acids):
MAPIIHRNLT APELVQWALK LEKDTKLSAR GALCVLSYAK TGRSPRDKRV VDTDDVHENV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -81.03 (PValue = 8.112573e-01)
Components of the Score Function:
Profile Score...............................................: -31.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1740 (length 60 amino acids):
MLCVSVAKDG FAIVLTGLDT KRRAPPHQQR LSRNVCFHQT KAKEFVARFH QPCFLAWSHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -82.49 (PValue = 8.291810e-01)
Components of the Score Function:
Profile Score...............................................: -17.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.02
Term 14 Hydrophobicity of Tail [26..end]...................: -1.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1690 (length 60 amino acids):
MPRPYKKSKG DVGTAKYSRP CKFFLRGSCS NQRCPYLHVR NQTVKRSVSH KEVAAQQGNG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.97 (PValue = 5.750463e-01)
Components of the Score Function:
Profile Score...............................................: -11.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.29
Term 4 Volume Compensation (-1, 1, 2).....................: -3.72
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1620 (length 60 amino acids):
MSAPSSVPPH KMANLHKLQR AWTLWYDSPS TYNTENWEMS LVPIMTVHSV EEFFVMLRYM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -47.61 (PValue = 2.178659e-01)
Components of the Score Function:
Profile Score...............................................: -13.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1580 (length 60 amino acids):
MQSTHSPDTP MDRVSEGGAS FSDDAVMVNK VGEAQVKDMV DRPITPGTDK LVDATRCRPC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -71.82 (PValue = 6.676802e-01)
Components of the Score Function:
Profile Score...............................................: -18.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.88
Term 14 Hydrophobicity of Tail [26..end]...................: -4.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1540 (length 60 amino acids):
MPLIEAHLPA LRPYIRYPVV AATGSFDVGR LQQYATVCPA TYVIETITEA LAELTRRMKW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.27 (PValue = 3.435346e-01)
Components of the Score Function:
Profile Score...............................................: -4.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.05
Term 14 Hydrophobicity of Tail [26..end]...................: -3.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0830 (length 60 amino acids):
MPSANAHFSL SAGSAEETRR SIDSDCPLFN CFGVLSGGVI IDPIDGSFME FTDAAVYTPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -57.22 (PValue = 3.801359e-01)
Components of the Score Function:
Profile Score...............................................: -10.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.60
Term 9 Volume Limitation [3..8]...........................: -0.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: -0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0870 (length 60 amino acids):
MAYHQSQQMQ KEFRLPMVPG LSCGEEMMRR NYDRRQIHGV KLDCATAIAG VPADRTLTGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -55.46 (PValue = 3.469531e-01)
Components of the Score Function:
Profile Score...............................................: -9.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.10
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0840 (length 60 amino acids):
MLRIGRRSLA VVTAAAITDA ATKLNALLDI KHRTHPAPQG EIKRFLKTEV MPVLAGTELD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -58.62 (PValue = 4.071988e-01)
Components of the Score Function:
Profile Score...............................................: -18.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.58
Term 4 Volume Compensation (-1, 1, 2).....................: -3.37
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.97
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1370 (length 60 amino acids):
MSSSPADAHS SAFPDTTSVA AAFSRDDFFE CPRCHRHCKS RTWFLKHLEA CSKSASSSST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -79.47 (PValue = 7.905731e-01)
Components of the Score Function:
Profile Score...............................................: -4.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.71
Term 4 Volume Compensation (-1, 1, 2).....................: -4.81
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.35
Term 9 Volume Limitation [3..8]...........................: -5.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.67
Term 14 Hydrophobicity of Tail [26..end]...................: -2.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1295 (length 60 amino acids):
MTHATLNAVS GFLSTISSRS AQSQRTHRPC LPYVLDAMEH HFSEMDILFG GTVTPSALTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -26.48 (PValue = 4.104443e-02)
Components of the Score Function:
Profile Score...............................................: 4.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.61
Term 4 Volume Compensation (-1, 1, 2).....................: -5.95
Term 5 Volume Compensation (-1, 2)........................: -5.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.22
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1265 (length 60 amino acids):
MHFSAALMTL AASACLVFAY HCARLSGTSF VWLSSFVALL TFLARLPRTL RSKGAAVCDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -29.58 (PValue = 5.434593e-02)
Components of the Score Function:
Profile Score...............................................: 4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.35
Term 9 Volume Limitation [3..8]...........................: -1.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -1.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1070 (length 60 amino acids):
MRHSLYRLCQ CAKLSFTILV LAVSILSCVD VLARAQADDA APEILYVRGC RDGAAEARET
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -68.30 (PValue = 6.011943e-01)
Components of the Score Function:
Profile Score...............................................: -14.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.80
Term 9 Volume Limitation [3..8]...........................: -1.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.25
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0990 (length 60 amino acids):
MKRGREEDKE AEVGGSRVGP SDRRSAATST EHKPRRLLKG ADVGLPLHES VIEETCEVEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -62.03 (PValue = 4.753412e-01)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.87
Term 14 Hydrophobicity of Tail [26..end]...................: -2.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0950 (length 60 amino acids):
MDISRSSQHS ATKESATDSS FVETQRAGSS LYIGPEMVPE EANRRSAHPN KSMKTSREQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -91.07 (PValue = 9.089497e-01)
Components of the Score Function:
Profile Score...............................................: -4.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.79
Term 5 Volume Compensation (-1, 2)........................: -4.72
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.80
Term 14 Hydrophobicity of Tail [26..end]...................: -2.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -74.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0930 (length 60 amino acids):
MRRVLQSSLD RRSAMCGWTA AVTMTSASRA FMDLYNPTPE HAALRETVAK FSREVVDKHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -85.92 (PValue = 8.660732e-01)
Components of the Score Function:
Profile Score...............................................: -18.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.66
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.16
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0890 (length 60 amino acids):
MRLPCPTHIP LSSAETHFVG TVAAACPLGL VRVGVFSLRQ ERIDSDTCRG STSPPPPQSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -64.70 (PValue = 5.294387e-01)
Components of the Score Function:
Profile Score...............................................: -2.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.38
Term 14 Hydrophobicity of Tail [26..end]...................: -4.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0780 (length 60 amino acids):
MQPLSGTIFR RSGGLLPSAQ STSTLAHWRR RLSTLGHRFA AARAAHASAP ASSALSAHDF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -43.31 (PValue = 1.625726e-01)
Components of the Score Function:
Profile Score...............................................: 0.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0730 (length 60 amino acids):
MRFAVSCVAG AVGAWVWRRP SGQDAECYQG IQNAITFRNP QRQGRVFSQR YEPYQLGEII
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.68 (PValue = 4.085092e-01)
Components of the Score Function:
Profile Score...............................................: -21.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0610 (length 60 amino acids):
MVDRLPALTP SKGTETKSSL KKKTDDYALC QEYAAYIAQL RGLLEETTGQ PPAGVRTAEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -70.78 (PValue = 6.487161e-01)
Components of the Score Function:
Profile Score...............................................: -9.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.28
Term 4 Volume Compensation (-1, 1, 2).....................: -1.06
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2070 (length 60 amino acids):
MGIVRSRLHK RKITGGKTKI HRKRMKAELG RLPANTRLGA RRVSPVRARG GNFKIRALRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -53.44 (PValue = 3.107043e-01)
Components of the Score Function:
Profile Score...............................................: -8.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.31
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0470 (length 60 amino acids):
MLRAHSDLEK WGSVSPAVYS MPLVHRLGVA CTSAVFALVL LTQRYYLRRY GQTISAVHTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -60.62 (PValue = 4.469942e-01)
Components of the Score Function:
Profile Score...............................................: -18.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0300 (length 60 amino acids):
MMRRVPVLLS AAYLPEWIAA AKKELKNRDP STLTIHSING FDIKPLYLAD DVESHPALPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -68.23 (PValue = 5.998331e-01)
Components of the Score Function:
Profile Score...............................................: -15.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.71
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0270 (length 60 amino acids):
MHFVAGGAAR RVGRVSDDEY ETSSYEETES SDLLSDNSED YVPLTFEYIS SNPKRRAGAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -77.44 (PValue = 7.613182e-01)
Components of the Score Function:
Profile Score...............................................: -10.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.40
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.06
Term 14 Hydrophobicity of Tail [26..end]...................: -3.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0170 (length 60 amino acids):
MQDQWKIDVE SEDHRSRRDM TEKSITRYVK GEVERQVTSS STSSSVFVSD CTWIMGASAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -31.62 (PValue = 6.491635e-02)
Components of the Score Function:
Profile Score...............................................: 8.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0080 (length 60 amino acids):
MALLEWARQD ATMKSSLELY CGPASKDLMI MDIPANVAVD AYLWEGLLVA ESMLEADGTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -39.45 (PValue = 1.224124e-01)
Components of the Score Function:
Profile Score...............................................: -12.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -1.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0030 (length 60 amino acids):
MDSQGPFLVI PTKRGAVPTL TPAQANAILE PSERILATSV FEAMDFVKPC IEAGMQLSTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -67.73 (PValue = 5.900244e-01)
Components of the Score Function:
Profile Score...............................................: -19.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0010 (length 60 amino acids):
MESKVPLFLY FMVTNHPEVK QYTELLCHQV DQANRRLKDE NFGDVYQEFG KDAGLAIKLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -24.63 (PValue = 3.447252e-02)
Components of the Score Function:
Profile Score...............................................: -7.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.78
Term 4 Volume Compensation (-1, 1, 2).....................: -1.22
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.08
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2340 (length 60 amino acids):
MRAMFSPSLK RLAHKDFDAW GYHIQWPQNQ ILSPLTGKVD FVVEDIKFAY NAWCLLRLAM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -46.06 (PValue = 1.966798e-01)
Components of the Score Function:
Profile Score...............................................: -20.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.19
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2290 (length 60 amino acids):
MLEEDRQALR KMKADFEALA DRANSDFQGY NTFERRMNHY NTVYTAATRN TSKAAEYPGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -70.48 (PValue = 6.431071e-01)
Components of the Score Function:
Profile Score...............................................: -6.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1920 (length 60 amino acids):
MAESAVLTPL SARHTVSPRD RSALATGIST LSSPTEETIE VDGATTTPSL PPETRVNVTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.39 (PValue = 3.456773e-01)
Components of the Score Function:
Profile Score...............................................: -7.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.05
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1870 (length 60 amino acids):
MFYSGWKLLA PAFMNVGALS AELRHSNATG DAAAAYLTQD LLLGNDYTDG SASATPQRQH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -71.74 (PValue = 6.662893e-01)
Components of the Score Function:
Profile Score...............................................: -6.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.14
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.14
Term 14 Hydrophobicity of Tail [26..end]...................: -4.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1860 (length 60 amino acids):
MSDSHQLYEV AGRALPLPPK RTPPRYSTIT RSEEQEYRII SRANSPSRAE TLRDGKISPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -42.88 (PValue = 1.577107e-01)
Components of the Score Function:
Profile Score...............................................: -7.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.32
Term 4 Volume Compensation (-1, 1, 2).....................: -3.04
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.02
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1830 (length 60 amino acids):
MRLTPLRCSA AAFHFTSLLL QGSGGGYRFF EDMYPKHDPA PRYRYYEDQM QSPTVRSLEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -62.46 (PValue = 4.840304e-01)
Components of the Score Function:
Profile Score...............................................: -2.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.62
Term 4 Volume Compensation (-1, 1, 2).....................: -3.51
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1660 (length 60 amino acids):
MIALSRCCLR YVPRRPPAFG TVVGGGTRPR RTGAPAPRQR NQETAANTET VAEAEVVAAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -50.77 (PValue = 2.657953e-01)
Components of the Score Function:
Profile Score...............................................: -10.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1380 (length 60 amino acids):
MANLCLGEDF SEELTCAVCL DSWKDPVELM PCGHIFCKAC ATGLKECPVC RDPIRSTKVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -71.16 (PValue = 6.556104e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -1.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1550 (length 60 amino acids):
MYVMQQHAQE AEALNVHLLD DASQLTELGQ YLPAHIFGTV LPLVGDEIAS GAAELNAQVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -45.41 (PValue = 1.881571e-01)
Components of the Score Function:
Profile Score...............................................: -18.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -0.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1500 (length 60 amino acids):
MKIFKDVLTG SEVVCDNDCP FDVEGDIMYV VNGRYIDVGG EDYGISANVD EDAAEGATGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -70.37 (PValue = 6.408640e-01)
Components of the Score Function:
Profile Score...............................................: -15.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1490 (length 60 amino acids):
MKATPILSTD TAEQARLKLR HQHPEYTEEE QQQTDSKKTW AASEEAENED DYVDDDDEDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -111.94 (PValue = 9.861246e-01)
Components of the Score Function:
Profile Score...............................................: -15.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.79
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.73
Term 14 Hydrophobicity of Tail [26..end]...................: -5.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -80.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1430 (length 60 amino acids):
MKRSTTVLQP APANSQQVSE SVSRRRVATS SNRSISLDGA TSAPTAVKVN TNTAAGASPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -53.73 (PValue = 3.158078e-01)
Components of the Score Function:
Profile Score...............................................: -5.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1290 (length 60 amino acids):
MRLLPLSHSS SSAPIKQWPS GTRAVRSPQL RQMDSFYSNQ VRREEAHALR AQLSAFVDHH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -70.13 (PValue = 6.363604e-01)
Components of the Score Function:
Profile Score...............................................: -10.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.82
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1280 (length 60 amino acids):
MPACLAYYTG AMCFTIIHFL AWAFALVATP TAQFQTPGHG CYTMWGYRKF CGDVPYDLTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -68.60 (PValue = 6.071151e-01)
Components of the Score Function:
Profile Score...............................................: -17.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1130 (length 60 amino acids):
MYRELHQRNF KSVNEELDFL RKDFVASRKT LALLHEDKVR LERELMARVF DMNELQRKLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -88.10 (PValue = 8.859562e-01)
Components of the Score Function:
Profile Score...............................................: -26.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.23
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1125 (length 60 amino acids):
MSSYNDSDAA ERPMRLNRYI PSPILSPIPT SPSYYSHREG RDRSSNLQAG AGDAQQRRWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -85.78 (PValue = 8.646920e-01)
Components of the Score Function:
Profile Score...............................................: -3.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.52
Term 14 Hydrophobicity of Tail [26..end]...................: -5.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0950 (length 60 amino acids):
MANDGRIFEE LLDAEVAVNM EKLREASRMG IPPAYRGVVY RYLLGVAFTD KSSEMTMEEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -64.05 (PValue = 5.163268e-01)
Components of the Score Function:
Profile Score...............................................: -15.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.06
Term 14 Hydrophobicity of Tail [26..end]...................: -2.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0760 (length 60 amino acids):
MRKSAAGSGV ANGTFRPPTM SSEGTPAERK PRTHPLLPAT LAAAVPRFMT GWRALSNGSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -50.30 (PValue = 2.583282e-01)
Components of the Score Function:
Profile Score...............................................: -9.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0690 (length 60 amino acids):
MLRRSRVTRF IVPSSSSPEL PRFLTEREKP ILSTSGDLYA FVVEYDHRST IPRLGHGPVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -67.40 (PValue = 5.836261e-01)
Components of the Score Function:
Profile Score...............................................: -26.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.73
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0660 (length 60 amino acids):
MWQNALIEIS NRAGKKATHP VLNKLQKAVA TDLSISRVHS GKSTGSLFSV KADALRDSRN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -53.88 (PValue = 3.183235e-01)
Components of the Score Function:
Profile Score...............................................: -5.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0552 (length 60 amino acids):
MSTDLECGSE ALGRYTCKDA PRPSVCCTNG CCATSPYDLD MYTGLPLWLR IAVAILAGFV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -19.31 (PValue = 2.028423e-02)
Components of the Score Function:
Profile Score...............................................: -6.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.19
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0490 (length 60 amino acids):
MVRFSTPLVL ASPSLSTLHP LSLPRTHTRN DTCMQAHNST VAHSVSRAPF SLPPSTHPPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.78 (PValue = 3.530075e-01)
Components of the Score Function:
Profile Score...............................................: -4.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.90
Term 14 Hydrophobicity of Tail [26..end]...................: -4.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0430 (length 60 amino acids):
MCDRADDSRT RVQAIMCAMH EVGEGDAATK TPPPFCLFSL LLGSSGFRGV ATAGPTERLC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -42.88 (PValue = 1.576816e-01)
Components of the Score Function:
Profile Score...............................................: 0.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0370 (length 60 amino acids):
MLRHVCSSAV VAYSAGLAPV SCRRDGSTSY FSAVPRAPPD AIMGIAADFA KDMCPSKVNL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.71 (PValue = 3.516179e-01)
Components of the Score Function:
Profile Score...............................................: -2.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.87
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0340 (length 60 amino acids):
MARDERFSWC PVLLVIALYT GSVLLFTTSM LSTSTVMRTV ATEPCCDTKV PPADQVVLIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -29.23 (PValue = 5.265490e-02)
Components of the Score Function:
Profile Score...............................................: -4.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0980 (length 60 amino acids):
MSAMDEPSDD ELRTNALNDP GLFLDIEDDD EDVVLSAGLP TPAVLLQRQQ QQQQQNATSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -92.12 (PValue = 9.160937e-01)
Components of the Score Function:
Profile Score...............................................: -19.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.52
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0190 (length 60 amino acids):
MDYRSPFELR QQLLEEARAS QSTLPPKKWK SKTKGSSGGN SDSCAAPLPR QCTVGKDGSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.75 (PValue = 3.712725e-01)
Components of the Score Function:
Profile Score...............................................: 3.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0100 (length 60 amino acids):
MSGECVYDLV SASDSLGAGG NVVNVKPAAT AKKSRRAPPP TASTFGIHGT SAVVANAGGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -46.85 (PValue = 2.073166e-01)
Components of the Score Function:
Profile Score...............................................: -3.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1210 (length 60 amino acids):
MSHPYATNEP LHGAGDDAEH AVSNVVSPLS GAAPPVAAMT PSPEEHADGS DNAHPAASSC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.55 (PValue = 3.304540e-01)
Components of the Score Function:
Profile Score...............................................: -1.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.19
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1150 (length 60 amino acids):
MRHLLREVKL PFMDVHLIET YLFHLAQGTP AKESIGNEST SNVPLLGDRA SPKAGICREV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.43 (PValue = 3.464881e-01)
Components of the Score Function:
Profile Score...............................................: -4.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1130 (length 60 amino acids):
MSAASKSIDA MLKPLLVGGR WMSNRFVMAP LTRCRADDNH VPTAAMVKHY SDRASMGLIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -30.59 (PValue = 5.938984e-02)
Components of the Score Function:
Profile Score...............................................: 0.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -19.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0995 (length 60 amino acids):
MCACVRVCAY IYIYIAISRY VSLSLYVQIY RRVGMHVLSA HLYSLGHVCV CVYICMCVYP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -48.79 (PValue = 2.350154e-01)
Components of the Score Function:
Profile Score...............................................: -10.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.28
Term 4 Volume Compensation (-1, 1, 2).....................: -1.71
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.19
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1830 (length 60 amino acids):
MPFAAQPLPY PHDALASKGM SKEQVTFHHE KHHKGYAVKL TAAAESNSAL ASKSLVDIIK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -31.65 (PValue = 6.506004e-02)
Components of the Score Function:
Profile Score...............................................: -5.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1800 (length 60 amino acids):
MRGNLYSRGF DPMKSRSERR KEKQAKLSKT KRVIRLKRRL GRIAARKFAG QEDSHMTALM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.03 (PValue = 5.960104e-01)
Components of the Score Function:
Profile Score...............................................: -15.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1760 (length 60 amino acids):
MRVGAAAISA IAASPFPVDG ATKAAKSSPA FPMRALVVAG THDSDAVEGN NDDEAIFELF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.82 (PValue = 2.356013e-01)
Components of the Score Function:
Profile Score...............................................: -8.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1520 (length 60 amino acids):
MDALHMFRYR RPPKKEIYAK LLALCAFGVF CAVVGFNVAH LPLPSAKRGV LDVSIPAADH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -41.84 (PValue = 1.462602e-01)
Components of the Score Function:
Profile Score...............................................: -6.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -3.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.40
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1450 (length 60 amino acids):
MKWLGRLMRR KKRTPLPPKP YVDTASTGRH MLDARLYGSA DLAQIDPEKP HWQDMRFESR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -105.99 (PValue = 9.743830e-01)
Components of the Score Function:
Profile Score...............................................: -22.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.67
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.85
Term 14 Hydrophobicity of Tail [26..end]...................: -5.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -67.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1390 (length 60 amino acids):
MIIGAPAKRW ATESVPELLA SPQTDLAAVL LSDAVADYLH SIDSVGAARV NRRGGDGSEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -75.05 (PValue = 7.238235e-01)
Components of the Score Function:
Profile Score...............................................: -16.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.23
Term 14 Hydrophobicity of Tail [26..end]...................: -3.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1380 (length 60 amino acids):
MDTSARRCFV EVYTDGCDEP RLLQLEPTVK FHNVLRRFDK DGDLYWGDHR IDPQTTPVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -49.35 (PValue = 2.434873e-01)
Components of the Score Function:
Profile Score...............................................: -8.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1260 (length 60 amino acids):
MSTFALEPLP LFQPITAASE QRITQVLDTL RAQHKSAFPL LFQRALDRGT ADLPTPQNDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -60.34 (PValue = 4.413474e-01)
Components of the Score Function:
Profile Score...............................................: -4.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1140 (length 60 amino acids):
MDFEAVARAT HAAMARERGA GHLFQQREQE LEKQAGTSAV PQQSALASGP ALASSSERFC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -58.91 (PValue = 4.130188e-01)
Components of the Score Function:
Profile Score...............................................: 2.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0960 (length 60 amino acids):
MSALPHIQKE FRNLTKDPPA GFRVELKDNS FFTWIVWFTG PEGTPYAGGQ YKASLTFPKE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -70.47 (PValue = 6.429233e-01)
Components of the Score Function:
Profile Score...............................................: -6.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0870 (length 60 amino acids):
MEQALIEAAI LKALSSAERV LSTDVAESIR VDHQDIVGAG KSLEADNYIR SEMEQRMVLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -82.33 (PValue = 8.272856e-01)
Components of the Score Function:
Profile Score...............................................: -26.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.74
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0840 (length 60 amino acids):
MRGRGGRGGR GGSFGGFSQQ PTNTISIRVS EIQQPVTEDV MRRVFQSVGV SCNSIQITPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -61.92 (PValue = 4.732384e-01)
Components of the Score Function:
Profile Score...............................................: -1.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0700 (length 60 amino acids):
MSGAGNLRSN RRREMDYMRL CNSTRKVYPS DTVAEFWVEF KGPEGTPYED GTWMLHVQLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -47.47 (PValue = 2.159397e-01)
Components of the Score Function:
Profile Score...............................................: -16.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1130 (length 60 amino acids):
MTSILDPRQP IEPLQRAMMV AKDSTLATAM LNVFGGYVMG FGFSLFGSMI SAETSTQAMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -57.87 (PValue = 3.927057e-01)
Components of the Score Function:
Profile Score...............................................: -9.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.10
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1190 (length 60 amino acids):
MRSREASRAA AEPAPTPSSE PLWQRPADAV AVPASVQRFY THFMTLLTQQ GRCGPATIAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -63.98 (PValue = 5.149900e-01)
Components of the Score Function:
Profile Score...............................................: -18.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1150 (length 60 amino acids):
MPPLHSRATR QLVKERSKIE GPRSLHRGIH YQENEAHASS YMQNAKKKRA DHRDLLVHHQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.14 (PValue = 6.365519e-01)
Components of the Score Function:
Profile Score...............................................: -14.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.14
Term 4 Volume Compensation (-1, 1, 2).....................: -1.56
Term 5 Volume Compensation (-1, 2)........................: -2.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0580 (length 60 amino acids):
MPEMSDVWLL GVVLTGETTF WLCEPTHLKP LAEDWKAINC RWLYPVLENL SDFADVSGFE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -63.64 (PValue = 5.080955e-01)
Components of the Score Function:
Profile Score...............................................: -25.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0530 (length 60 amino acids):
MLVRSITKCV VPLIKATSYT SSYIVEHPPT PVRLTSMLPL HNKSMPTPLL DPERLQEISC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -64.62 (PValue = 5.278268e-01)
Components of the Score Function:
Profile Score...............................................: -7.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.48
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.60
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0480 (length 60 amino acids):
MNASGATASE GKNPPRDART VSFHPESTFH EQHNAASQRF SHTSEPGWES RESNSGYAAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -69.99 (PValue = 6.338218e-01)
Components of the Score Function:
Profile Score...............................................: -10.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.85
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0290 (length 60 amino acids):
MRLCTRDVNA QGRLSKSPCV PLSQIDVGFL CTSMEAWPPL LPSFSREAVE AMNRFVQGFI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -56.95 (PValue = 3.749089e-01)
Components of the Score Function:
Profile Score...............................................: -11.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.20
Term 4 Volume Compensation (-1, 1, 2).....................: -1.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0250 (length 60 amino acids):
MPPQIPTTRA DSRGMSPRTP RGAHSTEAAR PSARSHLKNA SVANPLLPLH SLHPVVRPSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -37.99 (PValue = 1.093849e-01)
Components of the Score Function:
Profile Score...............................................: -4.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0200 (length 60 amino acids):
MPSTSVHHML NELVDLSHSI AALLEQGQVL SLTAAPSAAD RQQEASLKTQ EIERIVRRVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -45.44 (PValue = 1.885214e-01)
Components of the Score Function:
Profile Score...............................................: -13.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0165 (length 60 amino acids):
MLRTTRFARC ASAAAGKKFS FSEKMQRLQA DPEHALSGPE YAFMRDRLAE YRKLQQTYAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -77.67 (PValue = 7.648947e-01)
Components of the Score Function:
Profile Score...............................................: -23.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0100 (length 60 amino acids):
MADGPPRFFT KPEEYVGVNN HRRTLFLDMD ETLVHCYFEK PTFFIDTNED FFQFTLEDDP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -92.05 (PValue = 9.156824e-01)
Components of the Score Function:
Profile Score...............................................: -11.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -3.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0060 (length 60 amino acids):
MMTHPKLLPS QELVLHQVSV DSFSPATASV LKFPASPLLP RSPFSNTCAG KTSETTVPCS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -48.10 (PValue = 2.250167e-01)
Components of the Score Function:
Profile Score...............................................: 7.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.06
Term 14 Hydrophobicity of Tail [26..end]...................: -2.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.72
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1390 (length 60 amino acids):
MSFFKRTISL DSIGVVYDEL HPRSRDGAAA HGAEREQSER RVFSPVLTPS LNVARIDDVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -46.00 (PValue = 1.959247e-01)
Components of the Score Function:
Profile Score...............................................: -14.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1230 (length 60 amino acids):
MSDAPHRQSS TPASSFLPPE PLCVADILSE LLPFLLAAPQ PRDGCPPSSS AQEPAESPVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -27.99 (PValue = 4.712377e-02)
Components of the Score Function:
Profile Score...............................................: 13.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1200 (length 60 amino acids):
MRCAEQQPAP HGTESPSASP KVTEDSAEAS SNTDALRRGR QQRTSSPCPT PTSKAQMTRM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -67.52 (PValue = 5.859405e-01)
Components of the Score Function:
Profile Score...............................................: -10.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.47
Term 14 Hydrophobicity of Tail [26..end]...................: -4.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1020 (length 60 amino acids):
MSMLPRSNSA TVAPQPASGG GAPAFSVSMS SSRWPQRGAS PPLTTSSQVP PSAESSSANS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -62.93 (PValue = 4.935916e-01)
Components of the Score Function:
Profile Score...............................................: -2.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.32
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0860 (length 60 amino acids):
MNSYVKRYVG TDQRVTQLVG FKRASERRLV VVCALSALGI YCAVYLYEEK ERNRRHASIK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -111.08 (PValue = 9.847433e-01)
Components of the Score Function:
Profile Score...............................................: -34.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.42
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.72
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.74
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1010 (length 60 amino acids):
MFQVSSSGGM RKLPGKHNSP IAVSVPGGLT RVASARQGKR RASRVFYVGC LSAVALMLVC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -19.45 (PValue = 2.059199e-02)
Components of the Score Function:
Profile Score...............................................: -4.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.92
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0105 (length 60 amino acids):
MSALLSFPSR SSAAPLAMRG CRRTFTASAA AAISPSASSS TSANGRLLVG GAKAMERSGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -40.95 (PValue = 1.370292e-01)
Components of the Score Function:
Profile Score...............................................: -1.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.78
Term 14 Hydrophobicity of Tail [26..end]...................: -3.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0070 (length 60 amino acids):
MPSEILQRLY EGLGFPRDLV TQYLTDLAQA AEVPTFSDVT ELLDEAGPFQ SFLVRSCFEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -54.53 (PValue = 3.300088e-01)
Components of the Score Function:
Profile Score...............................................: -9.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0010 (length 60 amino acids):
MLYSLFSPFP SSVVCTCCWL ISPIVFVTRS KLKCSIVSSI QLRCLPDLFL PRHIFVLHRK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -61.12 (PValue = 4.569881e-01)
Components of the Score Function:
Profile Score...............................................: -9.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.14
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0730 (length 60 amino acids):
MDASSTLPSA SVAASSLVSS PFVPCIEDSA HTRRVGRHPV LFQRTLDAVS YRYLTASSRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -50.47 (PValue = 2.609268e-01)
Components of the Score Function:
Profile Score...............................................: -6.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0690 (length 60 amino acids):
MSSKLINAVC TMATRECVAE LALFHRALRM LHPTLPLYLG CSSEIRDAAE AATDATSQLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -49.04 (PValue = 2.387880e-01)
Components of the Score Function:
Profile Score...............................................: -6.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0580 (length 60 amino acids):
MAQRARRLSM AVLMAFVVCV LLFAGGVTRA ALTAAQNSIT AEFLRSFAVS IPGLASVWTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -43.53 (PValue = 1.651377e-01)
Components of the Score Function:
Profile Score...............................................: -6.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.67
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0540 (length 60 amino acids):
MTSPTHSHAS TTGSRRHHTP LLQERSNSLT RRQEMLKLQN GPPSTLHYPA SPQQEEADAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -91.26 (PValue = 9.102875e-01)
Components of the Score Function:
Profile Score...............................................: -11.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.66
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.70
Term 14 Hydrophobicity of Tail [26..end]...................: -4.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -68.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0440 (length 60 amino acids):
MDESMWFIQT KAMVLQSWYD DAEIEDDGVD DVLMEGEQAI VSTVHRPNTS LRAARQGTAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -69.20 (PValue = 6.187515e-01)
Components of the Score Function:
Profile Score...............................................: -1.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0320 (length 60 amino acids):
MVVTRHHTPT QQEPRASMLT GASAYGGGVG ALSGNHEGHG ASAQEMVVGS PNSQEVAELP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -52.59 (PValue = 2.958874e-01)
Components of the Score Function:
Profile Score...............................................: -8.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0174 (length 60 amino acids):
MSAYVLSTPL EARVAKCASL RAANAVPVVV EEAQARGGKA YFSALARETT VAQLVAAVRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.44 (PValue = 6.390272e-02)
Components of the Score Function:
Profile Score...............................................: -11.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1640 (length 60 amino acids):
MHDFLEEFEG FAKVLVESLW REGGLPPTAR PSSATTTCAR YGNVLVHVWP DGKLGMWMQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -45.30 (PValue = 1.867912e-01)
Components of the Score Function:
Profile Score...............................................: 2.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1480 (length 60 amino acids):
MCEICGSLCC CRPLHRPPSP LLLVLLSHLS LSLFLTSGSG AMGVCCSDCK RSDAEKNTKL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -74.04 (PValue = 7.069114e-01)
Components of the Score Function:
Profile Score...............................................: -14.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1427 (length 60 amino acids):
MSIAADMAYP AEAAAAADVS EVSDITLEAA RKQKIHNLKL KTACLSNEEF IQDLHVSDWS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -70.10 (PValue = 6.359128e-01)
Components of the Score Function:
Profile Score...............................................: -31.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1390 (length 60 amino acids):
MEYAQKSARL PRSAEEKEQW KRVIVILEHC PLQTIQTDRG FELLSDRHRS YHARHNQDPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -94.54 (PValue = 9.307727e-01)
Components of the Score Function:
Profile Score...............................................: -10.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.78
Term 14 Hydrophobicity of Tail [26..end]...................: -3.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1180 (length 60 amino acids):
MTVISAGVVN KQGRIVLARQ FTDISRVRIE GLLSAFPRLL ESSMSKQVTY IDAGTVRYVY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -50.17 (PValue = 2.562979e-01)
Components of the Score Function:
Profile Score...............................................: -3.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -1.35
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1110 (length 60 amino acids):
MELSRLLHRY HSGSSTVSAP ATASSNELRG TRREEGLPPP PAAAAAAAAG NSTVAKAQAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.44 (PValue = 1.886121e-01)
Components of the Score Function:
Profile Score...............................................: -4.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.78
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1100 (length 60 amino acids):
MTRAMNNITA WEKRREEYQQ WRRENLKGST YYRLSRPLDA LGGAKTEAEE NGVLPCLYNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -32.76 (PValue = 7.156212e-02)
Components of the Score Function:
Profile Score...............................................: -7.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1070 (length 60 amino acids):
MALSSQWSQA VVVRATPKGE IIVPQQPNNG TARAMAAAGN PIIVRARTAA NFGEGVTRNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -60.03 (PValue = 4.352361e-01)
Components of the Score Function:
Profile Score...............................................: -3.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.82
Term 14 Hydrophobicity of Tail [26..end]...................: -2.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1770 (length 60 amino acids):
MVYCPGGYSE HQDVPPEAHW CVFKQDRKYV PINFSGPPAA VSIRELCRSK PLEVALITAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -29.88 (PValue = 5.579086e-02)
Components of the Score Function:
Profile Score...............................................: -7.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.55
Term 4 Volume Compensation (-1, 1, 2).....................: -0.77
Term 5 Volume Compensation (-1, 2)........................: -2.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.58
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2490 (length 60 amino acids):
MALIECAESL SSSTKAKLQD AGILYVSEVV SLLSSTGYRA GDEGDSKPAS ALRHLSTALK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -30.21 (PValue = 5.744691e-02)
Components of the Score Function:
Profile Score...............................................: -4.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.19
Term 14 Hydrophobicity of Tail [26..end]...................: -0.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2400 (length 60 amino acids):
MGSHSKKSGR GGGGAHARQA RQRQQGQLKV LKKDLGVPDL KDVAQRLTQT AQRRTHSVLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.32 (PValue = 4.813334e-01)
Components of the Score Function:
Profile Score...............................................: -9.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2380 (length 60 amino acids):
MGQDQSRAKA CQLGQAETGG TDRSVSAGSA SAAPWEAPVS LAGVEGFQVV RLLPDSPAHK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -28.01 (PValue = 4.721448e-02)
Components of the Score Function:
Profile Score...............................................: 0.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.49
Term 14 Hydrophobicity of Tail [26..end]...................: -2.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2300 (length 60 amino acids):
MRVLVCGGVG YIGTHFVREL LRYSPHDVII ADSLEATHGS DVHVDTEKNY AARNPGANLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -67.64 (PValue = 5.882834e-01)
Components of the Score Function:
Profile Score...............................................: -17.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -0.86
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2290 (length 60 amino acids):
MDEDKRLATP PDARGDSPSS SNARLHLWSS FDSDEVPLTV EPTPLGARTG NGGQNVRPTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -66.30 (PValue = 5.617688e-01)
Components of the Score Function:
Profile Score...............................................: -14.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.05
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2240 (length 60 amino acids):
MNTRRKMIQA KPDVPSTHWH LMSEDFYPLF EADKRQHVEY WYNMAATGVQ RDIFRRICNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -58.40 (PValue = 4.030207e-01)
Components of the Score Function:
Profile Score...............................................: -7.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.95
Term 4 Volume Compensation (-1, 1, 2).....................: -3.36
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2230 (length 60 amino acids):
MRDGAENDSL SFAEAIVSAM DAQPVVPPAL LRNLQEPPFI WNRHPSHGIV LCLLQHRGIY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -67.04 (PValue = 5.764215e-01)
Components of the Score Function:
Profile Score...............................................: -26.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.75
Term 4 Volume Compensation (-1, 1, 2).....................: -2.23
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2190 (length 60 amino acids):
MRTRRCSRSQ SSQHVDSENN FYTATREDAA PASTALKRGD PAFAVPSTKT HVNAALLVEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -22.30 (PValue = 2.748848e-02)
Components of the Score Function:
Profile Score...............................................: -8.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2170 (length 60 amino acids):
MGAFALCVES AARDIRSLLT LHRVHPQVHS DIQRILGSLL RKNYENMTAP VPMDLIDPPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -69.40 (PValue = 6.225016e-01)
Components of the Score Function:
Profile Score...............................................: -7.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.23
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2050 (length 60 amino acids):
MTSVPSSATG VAEQQAMPSA DTIQQLQEAF CFVRHEREDV RKMAIRGIAE HSKENRDLWF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -82.75 (PValue = 8.322399e-01)
Components of the Score Function:
Profile Score...............................................: -20.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.19
Term 14 Hydrophobicity of Tail [26..end]...................: -3.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1810 (length 60 amino acids):
MSRQLLQRCS KKHLVIHMDI NKTIIQVDQA GGRTMDDVLN SNVAANTFGL VDPTDNKWRP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -85.56 (PValue = 8.624828e-01)
Components of the Score Function:
Profile Score...............................................: -16.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.53
Term 14 Hydrophobicity of Tail [26..end]...................: -5.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1650 (length 60 amino acids):
MAFQFPCGAE FLFVTQYLLQ FDDTVKFKLR REGRRTVLQV STVNIPPFSY TTVDFADESE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -80.61 (PValue = 8.057976e-01)
Components of the Score Function:
Profile Score...............................................: -19.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.17
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1630 (length 60 amino acids):
MHSEALVISY FLRSCSLKVS LPPKMLRRTF LSAERRIPFY PINSNNPIVF FDISIGSQPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -61.78 (PValue = 4.704213e-01)
Components of the Score Function:
Profile Score...............................................: -12.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.91
Term 5 Volume Compensation (-1, 2)........................: -1.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1575 (length 60 amino acids):
MQCRALCRRL LGFPKRGGLW RSVRSGKVAD GMRTSNPQCS ARHATTSSLT FNSAAASFTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -36.88 (PValue = 1.002765e-01)
Components of the Score Function:
Profile Score...............................................: -1.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1560 (length 60 amino acids):
MTNEQTTTFL VYVTLAVFNF ASSIIQGVAG IGDAILIQVL WLLACNLSDD FNRTPLGDSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -49.53 (PValue = 2.462322e-01)
Components of the Score Function:
Profile Score...............................................: -11.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.71
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1540 (length 60 amino acids):
MHLLYQKNPN NAPAQKILAA AAYAGVEITA EPCDENKTST DADFLNFCDP CGEYPVLELG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -46.15 (PValue = 1.978363e-01)
Components of the Score Function:
Profile Score...............................................: -14.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1510 (length 60 amino acids):
MRDVVTLFIE ASVAKGEWQA ALSALKLPLA SQSSSSSSTT TSAGSSFAEE VASNLFRLSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -32.34 (PValue = 6.903402e-02)
Components of the Score Function:
Profile Score...............................................: 6.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1470 (length 60 amino acids):
MTVNNSNNNN NGERLGSGTA RLFVGQLNFD ATEHDLRQIF SFYGHVIHTN VLRDADGKST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -57.67 (PValue = 3.887474e-01)
Components of the Score Function:
Profile Score...............................................: -5.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.63
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.81
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1410 (length 60 amino acids):
MHIGLAAAVP SPTTAPQWLQ DIENQLLIRN AIELKPSQSI FDSYTTLHVS VLHLQTVEDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -56.22 (PValue = 3.612536e-01)
Components of the Score Function:
Profile Score...............................................: -14.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.11
Term 14 Hydrophobicity of Tail [26..end]...................: -2.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1370 (length 60 amino acids):
MSIIYVDELA IRLPSDVRNT FNPLCAFGSS NNSSANTHNN NRCSAPVMGL REVQSGHVLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -25.36 (PValue = 3.694724e-02)
Components of the Score Function:
Profile Score...............................................: 1.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.07
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1290 (length 60 amino acids):
MPLPQPLRGR REEDETSSDN LSVASGGSCT FIPFAMVEPT TTDKSIRAPI LNSANRSCVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -65.39 (PValue = 5.433256e-01)
Components of the Score Function:
Profile Score...............................................: -5.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1280 (length 60 amino acids):
MSMTQNIVRR IFGDRKLPES LSNEEYDKYM QDNFPKWMKE FEDGGFLEKT KLPPIKSEEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -87.78 (PValue = 8.831852e-01)
Components of the Score Function:
Profile Score...............................................: -13.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1270 (length 60 amino acids):
MQIAPRTSAP VVHRFGLLRQ APLIAIRQHT SLWRFAASTA SVGTLLLSHS SSGGGSAVAC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -46.17 (PValue = 1.980955e-01)
Components of the Score Function:
Profile Score...............................................: -8.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.85
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1050 (length 60 amino acids):
MIPRNVPYEH SPPPRDNIVT VVMPGVISCR SMLSRYTGGD PLTVLCNWSD VNPTDPLYIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -52.58 (PValue = 2.957478e-01)
Components of the Score Function:
Profile Score...............................................: -7.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.73
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1280 (length 60 amino acids):
MRDAAATERE RLPSPADGDV DSLYEDGTEA ETAKQRSTVS TTTLLLALPW LGCTLFLVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -14.26 (PValue = 1.169353e-02)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.09
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1260 (length 60 amino acids):
MSQQLSFHDV SNDAIQHMQA SEALQKHLEN AQLAHRVCVA KALKANEPPV EKCALTWGEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -68.51 (PValue = 6.052669e-01)
Components of the Score Function:
Profile Score...............................................: -17.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.68
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1228 (length 60 amino acids):
MRDAAATERE RLPSPADGDV DSLYEDGTEA ETAKQRSTVS TTTLLLALPW LGCTLFLVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -14.26 (PValue = 1.169353e-02)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.09
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0343 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0950 (length 60 amino acids):
MRAFQVPPLG ADDQLLKAAS SERPGSGTAD GVVAPLKTHR SANELSAIVA DLHRTSHSAH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -50.58 (PValue = 2.627847e-01)
Components of the Score Function:
Profile Score...............................................: -13.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -4.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0870 (length 60 amino acids):
MGNPFEDLRP ALRSEEDEIR KGVFSQALRN LQQASLEERR RWCKAIREAT TRGGAKTKKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -89.67 (PValue = 8.986813e-01)
Components of the Score Function:
Profile Score...............................................: -18.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.04
Term 4 Volume Compensation (-1, 1, 2).....................: -1.52
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.33
Term 14 Hydrophobicity of Tail [26..end]...................: -3.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0840 (length 60 amino acids):
MWLRCSCRLF FHIPPPSLAA PARRVAPRTL RSHGRSQGSE PANAKVATSN PRTPDSFDSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -71.32 (PValue = 6.585805e-01)
Components of the Score Function:
Profile Score...............................................: -15.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.31
Term 14 Hydrophobicity of Tail [26..end]...................: -3.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0808 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0796 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0750 (length 60 amino acids):
MWMRMHPVER WTLLVDLGRR GAYLIEKPAQ LSPSAAREVA DKSTPISSDN RGSASVLGSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -42.54 (PValue = 1.538338e-01)
Components of the Score Function:
Profile Score...............................................: -11.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.06
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.23
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0720 (length 60 amino acids):
MAATKSAVSA AKRKAAKKVS RKSPEYTTLR KSCAPGAIAI ILAGRFRGRR AVILKQLPHN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -50.25 (PValue = 2.574815e-01)
Components of the Score Function:
Profile Score...............................................: -12.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.23
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0560 (length 60 amino acids):
MIAVETSLTA EDLPNSLEDL RLAIELSVPH GRTHGGYSGA DAGSWRNSVP TNVQQVWKKH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -78.10 (PValue = 7.711425e-01)
Components of the Score Function:
Profile Score...............................................: -11.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0550 (length 60 amino acids):
MTAVDVATLM EDDISVCLGG FTKELVYQQL LHCSEEGSLL RLLTVELVAN DGRTLVLAAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -35.24 (PValue = 8.787794e-02)
Components of the Score Function:
Profile Score...............................................: -8.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -8.56
Term 9 Volume Limitation [3..8]...........................: -1.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0510 (length 60 amino acids):
MPSAPLGRGP PHPFSPFNDE ADDDAHEESW RLYGSTVALA DCRVSTLLPS PPPQLTRSAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.63 (PValue = 2.327212e-01)
Components of the Score Function:
Profile Score...............................................: -4.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0380 (length 60 amino acids):
MIRYSKQQLL SLRPAAIEHV MRGRVVDHPP FLKIPESFAP LLSLPFAMEY VNVDAAMQLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -57.90 (PValue = 3.932586e-01)
Components of the Score Function:
Profile Score...............................................: -10.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0350 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0333 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0260 (length 60 amino acids):
MLRRSFAPLL TRASAVCLQG WGKTGSGSGW GSAGDSTSAG GWGSAGDSTS AGGWGSAGDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -41.64 (PValue = 1.441688e-01)
Components of the Score Function:
Profile Score...............................................: 2.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0020 (length 60 amino acids):
MGEVLVTATT ISGDTVALDT SAENVYGFQP GQIVHFTKSL RNGKVALIRG ISEGLLWFAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -41.77 (PValue = 1.454841e-01)
Components of the Score Function:
Profile Score...............................................: -8.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.14
Term 4 Volume Compensation (-1, 1, 2).....................: -2.09
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.40
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0010 (length 60 amino acids):
MRRCTVARYY WSRYRIPSQM PKFDGPAPVA APQNMNSTKT NEFIDPIDDK FPVTIRGNLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -54.65 (PValue = 3.322817e-01)
Components of the Score Function:
Profile Score...............................................: -15.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.92
Term 4 Volume Compensation (-1, 1, 2).....................: -3.33
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1130 (length 60 amino acids):
MSVSPLCDQL KRIEKAYFYQ PGKMTEVHAM SGTVSPHIEK RDYSRPFCLV SGNGNRPLAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -62.56 (PValue = 4.860232e-01)
Components of the Score Function:
Profile Score...............................................: -8.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1100 (length 60 amino acids):
MRRLTAPALS TPCVRSICGA APVMYFPPVP FASVSKEEQI KKNTKIAIEM IRRYKGEAPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -74.20 (PValue = 7.095768e-01)
Components of the Score Function:
Profile Score...............................................: -18.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1060 (length 60 amino acids):
MATSRAALCA VAVVCVVLAA ACAPARAIYV GTPAAALFEE FKRTYQRAYG TLTEEQQRLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.01 (PValue = 4.749161e-01)
Components of the Score Function:
Profile Score...............................................: -10.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.44
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0920 (length 60 amino acids):
MFSRGAAATA MAKVSRLVSP RLRIIHRDYL TRRGGRTHQR CSAVAVDYTP TYFATYKSDP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.67 (PValue = 4.480779e-01)
Components of the Score Function:
Profile Score...............................................: -8.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.63
Term 14 Hydrophobicity of Tail [26..end]...................: -3.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0760 (length 60 amino acids):
MACKLGVAIY VVLQLIAFVA VMVGTGVDMF YNKPEHSSGA RVCITLWGLK TDCRKPKITD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -74.51 (PValue = 7.147348e-01)
Components of the Score Function:
Profile Score...............................................: -8.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.95
Term 9 Volume Limitation [3..8]...........................: -0.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0720 (length 60 amino acids):
MACKLGVAIY VVLQLIAFVA VMVGTGVDMF YNKPEHSSGA RVCITLWGLK TDCRKPKITD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -74.51 (PValue = 7.147348e-01)
Components of the Score Function:
Profile Score...............................................: -8.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.95
Term 9 Volume Limitation [3..8]...........................: -0.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0560 (length 60 amino acids):
MQPRRMAGHF NPTPQANSLA ATHYAHTPEL RHMADGAAMS LSGQRIPLLK PTLSKWSRQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -32.09 (PValue = 6.757163e-02)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0450 (length 60 amino acids):
MREHIDTLLS LRIRDVVQQV VTISLFLSVV LVGWRGAAVI TNCEASIVVV LSGSMEPGYH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -40.94 (PValue = 1.369330e-01)
Components of the Score Function:
Profile Score...............................................: -4.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.05
Term 14 Hydrophobicity of Tail [26..end]...................: -3.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0320 (length 60 amino acids):
MAAMASRALI SSPSHLLQKF DSCRTIFMCC DIQEKLRNRI PNFQAAVDVS NSMATIHNTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -55.39 (PValue = 3.457808e-01)
Components of the Score Function:
Profile Score...............................................: -12.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.66
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0240 (length 60 amino acids):
MRRSAWVFVA PWVPPPRHDV KVTMPPPPGG EVGGSYGVST GYSDRLARTP YWKRMALSTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -67.80 (PValue = 5.914080e-01)
Components of the Score Function:
Profile Score...............................................: -14.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.39
Term 14 Hydrophobicity of Tail [26..end]...................: -1.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0200 (length 60 amino acids):
MSHASTFAAG ELPIRVLTFN LWGIFNSRMR EARMKVFATK IEHYDVILLQ EQFSVEDFDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -70.65 (PValue = 6.461972e-01)
Components of the Score Function:
Profile Score...............................................: -26.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.44
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0060 (length 60 amino acids):
MGNTCTKTGE VVDNRSNGTS GNKRFNRYRT KQYAKPEDVP SPPANNERVA DLKKMTVVKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -67.78 (PValue = 5.910703e-01)
Components of the Score Function:
Profile Score...............................................: -23.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0015 (length 60 amino acids):
HEQQHFYSQR SKPICFLPPY LHNGQGQPEA PEEGAADNIR GITRGGVKRI SSEVYEEVRR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -74.78 (PValue = 7.192414e-01)
Components of the Score Function:
Profile Score...............................................: -23.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.77
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0010 (length 60 amino acids):
MREENNVPAE WAPRDTHRLD PLQLLPPSQR HCGQSSAAES GEGCHSRSRG KPEVHSTRAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -61.21 (PValue = 4.588354e-01)
Components of the Score Function:
Profile Score...............................................: -7.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1830 (length 60 amino acids):
MFTSKSEYDR GVNTFSPEGR IFQIEYAVEA IKLGSTSLGI RTPKGVVLAA EKRVPSTLVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -32.48 (PValue = 6.985993e-02)
Components of the Score Function:
Profile Score...............................................: -6.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.03
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1569 (length 60 amino acids):
MEPSILNMQD YAAASSWRRR DQLRGLLSNH ADLVTSCIPL AAQGVLFTSA QIALHNTEKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -57.53 (PValue = 3.861817e-01)
Components of the Score Function:
Profile Score...............................................: -12.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.75
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1555 (length 60 amino acids):
MQGTWSVLKK NCLNFVPGLA LFASQSRDAF ATWLKIYNRG YTYGPQEFYE QAEVYTPDYW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -79.88 (PValue = 7.961557e-01)
Components of the Score Function:
Profile Score...............................................: -18.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.17
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.83
Term 14 Hydrophobicity of Tail [26..end]...................: -3.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1550 (length 60 amino acids):
MHRPSRKHVN KSGHIRYSKK IGLGFKTPAK ALNGKYIDRK CPFTSNVVIR GRILRGVVHS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -42.96 (PValue = 1.586432e-01)
Components of the Score Function:
Profile Score...............................................: -20.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1370 (length 60 amino acids):
MDDSRKADEQ ERGVDTMEKS VAVKVPLPAL LDIKAEALRS NPSFVVTCFS TLLTAVLLGL
Best predicted site is shown in red.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
Potential GPI-modification site was found.
Quality of the site ............... : S
Sequence position of the omega-site : 41
Score of the best site ............ : 0.95 (PValue = 1.424197e-03)
Best Site
Total Score.................................................: 0.95
Components of the Score Function:
Profile Score...............................................: 1.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1090 (length 60 amino acids):
MSAAIVNRAA SGAAAPRRKG NESKKDNNTQ TDVRLSNITA AKAVADCIRT SLGPRGMDKM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -79.20 (PValue = 7.868007e-01)
Components of the Score Function:
Profile Score...............................................: -13.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.74
Term 4 Volume Compensation (-1, 1, 2).....................: -1.18
Term 5 Volume Compensation (-1, 2)........................: -0.88
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.38
Term 14 Hydrophobicity of Tail [26..end]...................: -4.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1080 (length 60 amino acids):
MTSRYERQEK IGEGTYGVVY KARDTSTSAT VALKRIRLDS EEEGVPCTAI REISLLKELR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -38.44 (PValue = 1.133098e-01)
Components of the Score Function:
Profile Score...............................................: -20.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1030 (length 60 amino acids):
MLREARRRKQ QVAAKIGHEE YIYRLNGNPF SHQEVIRVRP QGDLDPRRVQ AAGIRVGVSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -46.68 (PValue = 2.049779e-01)
Components of the Score Function:
Profile Score...............................................: -15.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0930 (length 60 amino acids):
MATPRSAKKA ARKSSTKSAK AGLIFPVGRV GGMMRRGQYA RRIGSSGAVY LAAVLEYLTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -26.95 (PValue = 4.284043e-02)
Components of the Score Function:
Profile Score...............................................: 8.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.13
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -23.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0800 (length 60 amino acids):
MLYDRVNDIG SSQGEAIRYI LGAVSKSTVQ TTLTTLEQFC SRSVELHRYT IKATCTALLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -37.74 (PValue = 1.072706e-01)
Components of the Score Function:
Profile Score...............................................: -8.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.28
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.76
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0790 (length 60 amino acids):
MDTRMKDLSF KVVLLGEGRV GKTSLISRYV HNAFDEKEAS TVQASMHSSK AVPINDASSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -51.70 (PValue = 2.808883e-01)
Components of the Score Function:
Profile Score...............................................: -7.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.44
Term 14 Hydrophobicity of Tail [26..end]...................: -1.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0660 (length 60 amino acids):
MATAQNANPE CVGPESPQAG IAPSCQGCPN AAICASAPKG PDPDIPLIRE RLAGVKHKVM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -64.82 (PValue = 5.318218e-01)
Components of the Score Function:
Profile Score...............................................: -10.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0620 (length 60 amino acids):
MLSRCGAGPS DTGEDARCRS SPRVSCLCSA DAMRCIAHMD MDCFYAQVEA VRLGVDCRVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -62.54 (PValue = 4.857467e-01)
Components of the Score Function:
Profile Score...............................................: -15.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0540 (length 60 amino acids):
MSNLADKIRR QVEFYFSDVN VAKDVFLKSK MAEDPEGFIP LEVLLTFNRL NSLTKDPKVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -45.72 (PValue = 1.922620e-01)
Components of the Score Function:
Profile Score...............................................: -17.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.67
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.66
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0420 (length 60 amino acids):
MLCGSRTLHR CACAPALVTR GALNTAVSWT LSHTLALSAS LRRCSCTARS TSNPERCAGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -64.74 (PValue = 5.303399e-01)
Components of the Score Function:
Profile Score...............................................: -1.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.56
Term 14 Hydrophobicity of Tail [26..end]...................: -3.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0410 (length 60 amino acids):
MWSLLRPSPV IASSILTAAA ARGECRYPVG DIARGTIVIH VCLRHYHGYS DGQRTPHGQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -85.28 (PValue = 8.597087e-01)
Components of the Score Function:
Profile Score...............................................: -21.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.75
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.84
Term 14 Hydrophobicity of Tail [26..end]...................: -4.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0380 (length 60 amino acids):
MFHNSYQAGF LSILYSIGSK PLQIWDSQVR NGHVKRITDE DIQSSVLEIM GSNVSTCYIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -42.43 (PValue = 1.526624e-01)
Components of the Score Function:
Profile Score...............................................: -7.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.82
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.61
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0260 (length 60 amino acids):
MRVYTNLGRI DKVREVLAVG LRDLAAPKEL TLASPVQYAW LGSNARRRDG GNTTAATGTP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -52.23 (PValue = 2.898811e-01)
Components of the Score Function:
Profile Score...............................................: -1.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0230 (length 60 amino acids):
MPRVQLFIDN GGYSVKALYL PASADTSNRS AATHASALTS SSTHGEAAAT AATVAPAPKV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -38.19 (PValue = 1.110909e-01)
Components of the Score Function:
Profile Score...............................................: 2.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0210 (length 60 amino acids):
MLHEVNVGTS DIVRGGHGGD EAATPQQPPA LSVVEEHIQR IRLELCGQRH PPSGYASAIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -46.24 (PValue = 1.989935e-01)
Components of the Score Function:
Profile Score...............................................: -3.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.87
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0170 (length 60 amino acids):
MPPSAHWGKR PREGDSDETF LRFSELSPAQ KLERRRQERA EKKERDRTLA YFKSVQRALE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -79.04 (PValue = 7.846513e-01)
Components of the Score Function:
Profile Score...............................................: -27.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.54
Term 4 Volume Compensation (-1, 1, 2).....................: -2.38
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0160 (length 60 amino acids):
MRCWRRCWVA WPSAPSSCRR LWSLDAVMSA PQASVEGLLG QVRQQAAASP VWSVDFSALL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -23.62 (PValue = 3.127626e-02)
Components of the Score Function:
Profile Score...............................................: 1.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0090 (length 60 amino acids):
MDVKYGNWKN ARPRAHLMII FLFIITDLMN IMCYILYLLP SREYYGVYGS NAYITFSCIG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -64.97 (PValue = 5.350058e-01)
Components of the Score Function:
Profile Score...............................................: -10.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.1100 (length 60 amino acids):
MTMGASDDAA LSSEASLRSS SSGSSAAPLS EDDDMQDKRA RCAALKSLSG QHTVETVEVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -36.34 (PValue = 9.600710e-02)
Components of the Score Function:
Profile Score...............................................: -2.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.31
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.51
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.1000 (length 60 amino acids):
MMQEFHAFSV SPNKEHKLEI PEGCGFHLSV VSLPRGTNGK STVYVSADGK SYALASLDSQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -39.95 (PValue = 1.270972e-01)
Components of the Score Function:
Profile Score...............................................: -7.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -16.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0890 (length 60 amino acids):
MSSSVQNHQQ TLLQARTHVA ARDTTAVAIL GAKAGSNGSS QSFRPAAQCL EHTQSSFNQT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -54.58 (PValue = 3.308670e-01)
Components of the Score Function:
Profile Score...............................................: -5.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.32
Term 14 Hydrophobicity of Tail [26..end]...................: -3.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0805 (length 60 amino acids):
MELEEMAASH PHAIFTSLFF DQLKSIIDSE FPLRHDPVKS PLTYGTAGFR FKADLLPPVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -24.50 (PValue = 3.405207e-02)
Components of the Score Function:
Profile Score...............................................: 0.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.52
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0743 (length 60 amino acids):
MDALSMRQQQ SHVHQTDNLV PTRTAVLHLR PAPTAEEAER AQRQHDMRVT WNPDVREPVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -86.72 (PValue = 8.736776e-01)
Components of the Score Function:
Profile Score...............................................: -23.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.48
Term 4 Volume Compensation (-1, 1, 2).....................: -2.46
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.66
Term 14 Hydrophobicity of Tail [26..end]...................: -2.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0710 (length 60 amino acids):
MSIASNTPLR PSTSASNANT ELSKDQLEEI REAFDLFDTD GSGTIDVREL RVAMRALGFE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -43.39 (PValue = 1.635113e-01)
Components of the Score Function:
Profile Score...............................................: -2.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -1.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.66
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0680 (length 60 amino acids):
MRNYNNFNRV WKAPRRPFEK ERLDREMKLC GQYGLRCKRE IWRVNMTLSK MRRTARLLLT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -33.52 (PValue = 7.624269e-02)
Components of the Score Function:
Profile Score...............................................: -1.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.77
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.40
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0640 (length 60 amino acids):
MYAGFPRLNV TEAQETVDLD FELTNEKGCV KVTEFPVPKV VNLSFPAVCA LLYNARTATS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -50.15 (PValue = 2.558669e-01)
Components of the Score Function:
Profile Score...............................................: -15.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0700 (length 60 amino acids):
MYASLGISSE QVYGDMYTAW LRDTHEKNTP DVKRLYTTTI EKGFGDQKIL LRRQRLGANF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -72.91 (PValue = 6.871925e-01)
Components of the Score Function:
Profile Score...............................................: -11.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.87
Term 4 Volume Compensation (-1, 1, 2).....................: -2.19
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.31
Term 9 Volume Limitation [3..8]...........................: -1.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.81
Term 14 Hydrophobicity of Tail [26..end]...................: -1.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0475 (length 60 amino acids):
MTAESDRQRF ARYVLEISQV QRNHVADRVE QLAHHESLSW QYFFGCIAFS TGSVLAAFKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -45.91 (PValue = 1.947444e-01)
Components of the Score Function:
Profile Score...............................................: -10.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0440 (length 60 amino acids):
MQAAARRIIR VGAQASKTVK ITQRDVVTFG DLIQDHNPIH SDAAAAKAAG FPSPICYGML
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -35.64 (PValue = 9.073270e-02)
Components of the Score Function:
Profile Score...............................................: 0.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0340 (length 60 amino acids):
MSDYGDAQHN GGDSGARGEG GYGGGRDGGY DGGRNGGYGG GRDGGYGGGY GGGRGGDRYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -72.59 (PValue = 6.815230e-01)
Components of the Score Function:
Profile Score...............................................: -13.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0335 (length 60 amino acids):
MPSGIPGVDL ALLTQVTRHL SERRLHVYHP GSRRSAAALV LRFGDDTQRT LTEAWSTFRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -62.60 (PValue = 4.870044e-01)
Components of the Score Function:
Profile Score...............................................: -6.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.75
Term 9 Volume Limitation [3..8]...........................: -1.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.86
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0290 (length 60 amino acids):
MSALSTSVVA SPEAYTKALL HCYKYPAQPV MGMLVGKRLS DDAGAAAQSS GSPNSPHTSC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.11 (PValue = 3.973863e-01)
Components of the Score Function:
Profile Score...............................................: -4.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.53
Term 14 Hydrophobicity of Tail [26..end]...................: -4.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0250 (length 60 amino acids):
MSGSQLDSAT AAATMTSTAV SSASAEPSPP TGSSSTAIMP SSLTALAQQQ QQRLLVSSLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -14.78 (PValue = 1.240476e-02)
Components of the Score Function:
Profile Score...............................................: -10.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0240 (length 60 amino acids):
MLRFTRWLGE HVAMSAGVGS PVYKETSNLF WHRRVHNFRR RGSFGKLATL VGYGTAGAGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -47.66 (PValue = 2.186963e-01)
Components of the Score Function:
Profile Score...............................................: -4.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.11
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0110 (length 60 amino acids):
MTVVLCRSYE TPTYLIPYYL RDVRSRFLHY ASVRKRKGGP MYMTVEDFVL ALLASPEKVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -20.04 (PValue = 2.187619e-02)
Components of the Score Function:
Profile Score...............................................: -2.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0020 (length 60 amino acids):
MENGMQNTFL AFSTFLCITP QPGITQSLLL PAVFQSAMQD RLREIEGTLA RTKERKNTIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -64.46 (PValue = 5.246042e-01)
Components of the Score Function:
Profile Score...............................................: -16.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1630 (length 60 amino acids):
MSSRVAGSYK KAHTLEARLR DAEKVRERAP DRILVICEKA ENSPVPDLDK SKFLVPPDAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -49.06 (PValue = 2.391413e-01)
Components of the Score Function:
Profile Score...............................................: -6.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.35
Term 5 Volume Compensation (-1, 2)........................: -0.52
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1610 (length 60 amino acids):
MSARRSRLRR VWWLPHQRIV VLKDVDLWAE DCVTEGVDVV AERLWRMRVD ASRSGRAQYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -77.80 (PValue = 7.667011e-01)
Components of the Score Function:
Profile Score...............................................: -21.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -1.19
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.28
Term 9 Volume Limitation [3..8]...........................: -0.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1510 (length 60 amino acids):
MSTEHARNLL YLALNAFSSI GIVYTNKVIF TRHGFSYGTL LTVIHFFITT LGLFICRMMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -53.66 (PValue = 3.145976e-01)
Components of the Score Function:
Profile Score...............................................: -7.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -5.86
Term 9 Volume Limitation [3..8]...........................: -0.98
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1500 (length 60 amino acids):
MDPNTCAPAS AVTDEQPLTL LWGTWEMWCD MPQRQQGQST ENTNWLEQVK SIGLFDSAEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -66.17 (PValue = 5.591359e-01)
Components of the Score Function:
Profile Score...............................................: -20.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.97
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1490 (length 60 amino acids):
MSTEHARNLL YLALNAFSSI GIVYTNKVIF TRHGFSYGTL LTVIHFFITT LGLFICRMMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -53.66 (PValue = 3.145976e-01)
Components of the Score Function:
Profile Score...............................................: -7.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -5.86
Term 9 Volume Limitation [3..8]...........................: -0.98
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1140 (length 60 amino acids):
MELQTQPRFC PPRPRPYAAS LVWMCLACGQ LAPCEAASRY PMDNVDGLDN SLQGTSSAMN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -58.87 (PValue = 4.122785e-01)
Components of the Score Function:
Profile Score...............................................: -13.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0810 (length 60 amino acids):
MAQCVRRLVL AATLAAAVAL LLCTSSAPVA RAAGTGDFTA AQRTNTLAVL QAFGRAIPKL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -24.25 (PValue = 3.325552e-02)
Components of the Score Function:
Profile Score...............................................: -5.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1070 (length 60 amino acids):
MAQCVRRLVL AATLAAAVAL LLCTSSAPVA RADGTGDFTD EQRTNTLAVL QAFGRAIPKL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -25.14 (PValue = 3.620094e-02)
Components of the Score Function:
Profile Score...............................................: -6.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0970 (length 60 amino acids):
MLRCAHSKLF RATPLLRVWA AEEDDASAPR TTFRNVRPGR LLRLWRQMRH RAWMLYAWDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -101.35 (PValue = 9.608522e-01)
Components of the Score Function:
Profile Score...............................................: -15.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -32.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -74.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0920 (length 60 amino acids):
MAQCVRRLVL AATLAAAVAL LLCTSSAPVA RAAGTGDFTE EQRTNTLAVL QAFGRAIPEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -27.58 (PValue = 4.537987e-02)
Components of the Score Function:
Profile Score...............................................: -8.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0895 (length 60 amino acids):
MLRCAPSKLF RATPLLRVWA AEEDDASAPR TTFRNVRPGR LLRLWRQMRH RAWMLYAWDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -101.35 (PValue = 9.608522e-01)
Components of the Score Function:
Profile Score...............................................: -15.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -32.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -74.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0890 (length 60 amino acids):
MAQCVRRLVL AATLAAAVAL LLCTSSAPVA RAAGTGDFTA AQRTNTLAVL QAFGRAIPEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -27.08 (PValue = 4.337578e-02)
Components of the Score Function:
Profile Score...............................................: -8.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0560 (length 60 amino acids):
MPPKRKESAN GAETGRSAAT VKRRREGQRS EFSSSALHST FEAHVTAAQN SFLRGDSQAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -47.69 (PValue = 2.190138e-01)
Components of the Score Function:
Profile Score...............................................: -5.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.80
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0370 (length 60 amino acids):
MPANSSAVPC LSSGSLAAAC ESYGVDSRLL YNDSEQLSKK CFDYAQRLIL WSRLLSAASM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -49.58 (PValue = 2.470406e-01)
Components of the Score Function:
Profile Score...............................................: -6.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.49
Term 4 Volume Compensation (-1, 1, 2).....................: -4.68
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -1.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0290 (length 60 amino acids):
MNDTEDDEKP KAQESVVDDA GTDMARTAAE ATAAEALDSR RGAEAATAAA GGHATLWADR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -55.84 (PValue = 3.540565e-01)
Components of the Score Function:
Profile Score...............................................: -8.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.23
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.70
Term 14 Hydrophobicity of Tail [26..end]...................: -1.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0230 (length 60 amino acids):
MQWATSSSLL PKLSNKESGD GGVKHLGSTL AAVLPVLQQQ EQHRVSARRR DGSVDNGAEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -72.01 (PValue = 6.711668e-01)
Components of the Score Function:
Profile Score...............................................: -8.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0220 (length 60 amino acids):
MRNYCTKTFG STFSVTVVPT LKDNFSYLIN DHTTHTLAAV DVNADYKPIL TYIEEHLKQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -82.01 (PValue = 8.234362e-01)
Components of the Score Function:
Profile Score...............................................: -17.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -2.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0180 (length 60 amino acids):
MSDVLGYLNG VLHRVSATFM PTEMDDVASF LRGDAWVVAT AASASAQQTA QTFSTAATDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -42.33 (PValue = 1.515612e-01)
Components of the Score Function:
Profile Score...............................................: -1.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0140 (length 60 amino acids):
MSYSTLALCT CVLYAPHAVL CGLGLLWQPM LVVMSILAAF IAFLPLVMTG LVFQALRWAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 21 had the best score.
Total Score.................................................: -38.14 (PValue = 1.107119e-01)
Components of the Score Function:
Profile Score...............................................: 1.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.23
Term 4 Volume Compensation (-1, 1, 2).....................: -1.08
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -32.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.85
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0080 (length 60 amino acids):
MQSVLPYTTN PAQIGSIEKL KLINPSSAAA TGPYVNVRDP KLVVGGLLHN WDAEAAHALL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -38.92 (PValue = 1.175589e-01)
Components of the Score Function:
Profile Score...............................................: -12.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0075 (length 60 amino acids):
MDLCGTDVVP FQGVRLGTTP TEDLYLTTLE KKLLRMSAME QLRACCFADP QLPTARNGGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -68.26 (PValue = 6.004253e-01)
Components of the Score Function:
Profile Score...............................................: -10.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.60
Term 4 Volume Compensation (-1, 1, 2).....................: -2.12
Term 5 Volume Compensation (-1, 2)........................: -3.60
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0070 (length 60 amino acids):
MHTHTPFTSF SSFSPPFVSA PLSSPIAHDL AHHGAGLLRQ PQVLRMSGEF SLLQHLGVTV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -34.79 (PValue = 8.469175e-02)
Components of the Score Function:
Profile Score...............................................: -7.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: -1.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.48
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0050 (length 60 amino acids):
MAQPKERASI SSEELVVWKA AERVRKGASL PLSRVARCIA SATKLLKVET KVVERVCGDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -35.09 (PValue = 8.681180e-02)
Components of the Score Function:
Profile Score...............................................: -13.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.31
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0010 (length 60 amino acids):
MCCSLLFFVY IAFSLIHTLH HLFLFSECNI SADERMDVPS EDYDVSIMIK AIHEVQDVLT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -50.01 (PValue = 2.537041e-01)
Components of the Score Function:
Profile Score...............................................: -15.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.3190 (length 60 amino acids):
MDSEQPKKVP RTETKTKELL RTTVADGPFS LLDTAMKEKK RVFIQCRNSK ALLAHVIAFD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -56.58 (PValue = 3.680533e-01)
Components of the Score Function:
Profile Score...............................................: -21.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -9.12
Term 4 Volume Compensation (-1, 1, 2).....................: -5.94
Term 5 Volume Compensation (-1, 2)........................: -2.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.76
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2955 (length 60 amino acids):
MPLPPFAPNQ WRGQRGSPCV YRMANSWCCQ ARPPLCLCCR DVRRCLTPSP CLLVLSASIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -14.32 (PValue = 1.176325e-02)
Components of the Score Function:
Profile Score...............................................: -4.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.03
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.10
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2830 (length 60 amino acids):
MLYSSIRYGR NCTGTNETVK PLGPCVTPLG TILGVFNGVF GYSNCNDSYV STELRYINLT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -53.13 (PValue = 3.052277e-01)
Components of the Score Function:
Profile Score...............................................: -9.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.11
Term 14 Hydrophobicity of Tail [26..end]...................: -0.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0480 (length 60 amino acids):
MPHIPRNHYL VVHDAIRKLL GPDAQLAAFV KAQHAFQCDM LVNDARTDPE ELTRAGARHS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -64.18 (PValue = 5.190196e-01)
Components of the Score Function:
Profile Score...............................................: -11.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.92
Term 14 Hydrophobicity of Tail [26..end]...................: -2.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0420 (length 60 amino acids):
MRGKTARRRP DPRRMMVGKA PKNCVHIGLC VLYSGSGFRG LQIQVHAPTC HTVEGVLIQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -22.32 (PValue = 2.753459e-02)
Components of the Score Function:
Profile Score...............................................: -5.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.31
Term 9 Volume Limitation [3..8]...........................: -1.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.19
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0380 (length 60 amino acids):
MKGFLQNKKS SGGFDPVKVR ANIRMAITRL GMQKNKLVNS VKTQRRSVAE LLALEKYDSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -55.82 (PValue = 3.536280e-01)
Components of the Score Function:
Profile Score...............................................: -12.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.94
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0360 (length 60 amino acids):
MRRARHRLGV RRFSDWTIAT WRPNTEAASP LRRCGTAAEG TAPSASTTPS STAPPRLPSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -42.83 (PValue = 1.571189e-01)
Components of the Score Function:
Profile Score...............................................: 4.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0260 (length 60 amino acids):
MHEIHGVCLA LVKAAPESRP AILVEFASSL EVIWTVAKRQ LREEERTQSA TRFKVHAETL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -41.39 (PValue = 1.415666e-01)
Components of the Score Function:
Profile Score...............................................: 2.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.37
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0058 (length 60 amino acids):
MDFAERACVI DVGRSMISVC VSSAGEVQRW HVAVSRDAAV TLTAADLLVP GGRHSVALDR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -40.58 (PValue = 1.332975e-01)
Components of the Score Function:
Profile Score...............................................: -9.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.36
Term 4 Volume Compensation (-1, 1, 2).....................: -3.09
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.04
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0055 (length 60 amino acids):
MIENGEDEWS GVRAQNATPS SRELLERIQY NRELSRASSL ARRRVGALTP SDAEVQAVYA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -50.08 (PValue = 2.548483e-01)
Components of the Score Function:
Profile Score...............................................: -8.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0040 (length 60 amino acids):
MDKYALGPVI GEGQFGSVRM ATVKATGQTV AVKLLHVPRL TEGIPHPVAR ELLIASRVDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.23 (PValue = 3.069639e-01)
Components of the Score Function:
Profile Score...............................................: -22.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.83
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0020 (length 60 amino acids):
MPADLWRLNH VAIAVPASRS LVEAGEMYTR IFHAKVSEPV KQEEHGVITV FVELANTKIE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -53.33 (PValue = 3.086605e-01)
Components of the Score Function:
Profile Score...............................................: -27.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.39
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: -2.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.00
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1290 (length 60 amino acids):
MQYVAEPSSI RVYYRGNKYD VPLEFATRMH PGGSSILMRY KDCDITKDFE KMNHSVDAAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -76.15 (PValue = 7.414826e-01)
Components of the Score Function:
Profile Score...............................................: -17.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.47
Term 4 Volume Compensation (-1, 1, 2).....................: -1.22
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.79
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.63
Term 14 Hydrophobicity of Tail [26..end]...................: -1.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1170 (length 60 amino acids):
MEQGAFNDVA KKALEFRNRY YKMLDDPQDR LNVAGLYAPD VPMVCEWNGH PLSTVDDVRN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.98 (PValue = 5.551999e-01)
Components of the Score Function:
Profile Score...............................................: -21.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.49
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.34
Term 14 Hydrophobicity of Tail [26..end]...................: -2.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0870 (length 60 amino acids):
MPPKQTSAGG AKKKTSTAAT RNNRHAHPQA DIGFLPPGAK YPAEASWNHH EHQQRNSASY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -83.43 (PValue = 8.399504e-01)
Components of the Score Function:
Profile Score...............................................: -16.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.85
Term 14 Hydrophobicity of Tail [26..end]...................: -3.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0780 (length 60 amino acids):
MDGTLSNAKG GDGVAVSGPP PAQVTRLSAA PVVGASGSRR GNRTRSPGLN AITSRVSRSN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -47.67 (PValue = 2.187127e-01)
Components of the Score Function:
Profile Score...............................................: -2.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.24
Term 14 Hydrophobicity of Tail [26..end]...................: -3.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0750 (length 60 amino acids):
MQRGHGGSSL SSSDGPSPAV LSSAGSLWSR VGREVASWRR GTVSIHEVDA WLRFNPYIRR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -75.65 (PValue = 7.335513e-01)
Components of the Score Function:
Profile Score...............................................: -19.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.50
Term 14 Hydrophobicity of Tail [26..end]...................: -3.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0670 (length 60 amino acids):
MGGVCSCATT KRAPHDRGSA AGKDANPNHG SLPESPAASA ALGGSSSTHV RVTDRNGGAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -54.69 (PValue = 3.330216e-01)
Components of the Score Function:
Profile Score...............................................: 0.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.02
Term 14 Hydrophobicity of Tail [26..end]...................: -2.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0570 (length 60 amino acids):
MPPAQKTAKK AAPKDAKATK VVKVTTRKSY TRPQFRRPHT YRKPAMAKPS NRVTVESKDI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -59.03 (PValue = 4.154197e-01)
Components of the Score Function:
Profile Score...............................................: -11.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0560 (length 60 amino acids):
MKRARSANIP GAILHSLAEL QDGLNAMIDP SWRAVRSLDN WALAITMEST ELLDSYPWKW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -70.15 (PValue = 6.367995e-01)
Components of the Score Function:
Profile Score...............................................: -17.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0550 (length 60 amino acids):
MDTGRRRQVR NARRLRRHQR SGADGNDAQE MRTGSAADSG RSIPPPPNSA PGVMMGAGAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -36.82 (PValue = 9.977381e-02)
Components of the Score Function:
Profile Score...............................................: 5.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0530 (length 60 amino acids):
MSSHALSSGS APNVSSATTG TVAQQADSLT RNLLLGIPKE GLSPDSPEAA DLQAAEAFVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -47.58 (PValue = 2.174635e-01)
Components of the Score Function:
Profile Score...............................................: -1.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.29
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0410 (length 60 amino acids):
MTPLSLSSSR HSFKQNETQN MVSLKLQARL ASSILGCGRA RVWLDPNEAV EIQNANSRKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -75.15 (PValue = 7.254570e-01)
Components of the Score Function:
Profile Score...............................................: -15.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.07
Term 9 Volume Limitation [3..8]...........................: -1.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.36
Term 14 Hydrophobicity of Tail [26..end]...................: -4.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0370 (length 60 amino acids):
MPRTLMKAAV DAVEAMDCSG IAFRLTGKSI SVNIFRSCRK ADPTELFPLC QIIKSMGDRH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -82.61 (PValue = 8.305044e-01)
Components of the Score Function:
Profile Score...............................................: -13.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.59
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.92
Term 14 Hydrophobicity of Tail [26..end]...................: -3.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0320 (length 60 amino acids):
MPVSQCMRIA AYHASTNEAD ADELYASTIS TDRCSSDDER APDLEVEASP PQHDGSTDVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -71.24 (PValue = 6.571625e-01)
Components of the Score Function:
Profile Score...............................................: -8.68
Term 0 Contents and Windows of DE in Region [-11..1]......: -0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.35
Term 5 Volume Compensation (-1, 2)........................: -0.52
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.38
Term 14 Hydrophobicity of Tail [26..end]...................: -3.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0250 (length 60 amino acids):
MDPLAGLTTG SRNVIDDFFR WSRLSLDKFK RDLTVEASAF QAGNLWREQY TKAEVAQMLN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.52 (PValue = 5.460184e-01)
Components of the Score Function:
Profile Score...............................................: -15.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0170 (length 60 amino acids):
MRLLTHNFLA CLKCDTYPLL VTAAEMEEIP VEYDAEFTRR MLARVDYASL RTTFHALREA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -75.39 (PValue = 7.292992e-01)
Components of the Score Function:
Profile Score...............................................: -12.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.37
Term 4 Volume Compensation (-1, 1, 2).....................: -2.15
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0120 (length 60 amino acids):
MRAVAVVAVV LCALSFLNVA AEPEVTSKVY FDVMMDSEPL GRITIGLFGK DAPLTTENFR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -62.33 (PValue = 4.815559e-01)
Components of the Score Function:
Profile Score...............................................: -14.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -5.72
Term 4 Volume Compensation (-1, 1, 2).....................: -5.84
Term 5 Volume Compensation (-1, 2)........................: -5.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.3190 (length 60 amino acids):
MREENNVPAE WAPRDTHRLD PLQLLPPSQR HCGQSSAAES GEGCHSRSRG KPEVHSTRAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -61.21 (PValue = 4.588354e-01)
Components of the Score Function:
Profile Score...............................................: -7.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.41
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.3180 (length 60 amino acids):
MAKGKRSTDA KGSQRRQKKV LRDNIRGITR GCVRRMARRG GVKRISSEVY EEVRRVLKAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -55.43 (PValue = 3.465099e-01)
Components of the Score Function:
Profile Score...............................................: -20.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.3080 (length 60 amino acids):
MGGSCMGLQS IILVCIVGPL IHGMDSDEEP PAAVANTFST TAARGVSSSL ISRPLLSSGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -42.92 (PValue = 1.581578e-01)
Components of the Score Function:
Profile Score...............................................: -1.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2990 (length 60 amino acids):
MRAACTRHRP SQRHSGYPIS FGWGGPIKGR HGLSTHATKR HMEELAKSLQ QAQAAVLGVQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -57.56 (PValue = 3.866990e-01)
Components of the Score Function:
Profile Score...............................................: -26.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2960 (length 60 amino acids):
MEEQDQRKPN GGNNGLPVPP STTETGQGPL QDILGRTPNC QYVKKRLLGQ GSFGSAWRVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -63.79 (PValue = 5.109666e-01)
Components of the Score Function:
Profile Score...............................................: -6.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2950 (length 60 amino acids):
MGRLLELTFS GGHLRRLEQE RMVPGFQAQR LQPSHKPRVV IVKKESVGCV PRAQRQPNVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -59.61 (PValue = 4.267896e-01)
Components of the Score Function:
Profile Score...............................................: -4.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2030 (length 60 amino acids):
MQIFVKTLTG KTIALEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EEGRTLSDYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -74.69 (PValue = 7.177227e-01)
Components of the Score Function:
Profile Score...............................................: -27.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2050 (length 60 amino acids):
MATLADGASS EAFTAHSDTH TLTGDQVNKI KALICLMKER YDPLPPQLET YLRLIPPTSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.60 (PValue = 3.496023e-01)
Components of the Score Function:
Profile Score...............................................: -9.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.90
Term 4 Volume Compensation (-1, 1, 2).....................: -4.92
Term 5 Volume Compensation (-1, 2)........................: -5.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2860 (length 60 amino acids):
MEAAPAAAAP RLPQAPKRPR EESDAPLQES SNGSVPANFS NEASVTTPVA GTELVVDVDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -33.42 (PValue = 7.562259e-02)
Components of the Score Function:
Profile Score...............................................: -5.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2820 (length 60 amino acids):
MKFIPLDSFS ALNSLLQGVE AQGCCITMRL EAYTCRHTKE ERQIANSIAC YQNNVQLTPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -62.11 (PValue = 4.769407e-01)
Components of the Score Function:
Profile Score...............................................: -16.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.91
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2785 (length 60 amino acids):
PTPSRAFSSE QDMLLGIVST CALARVLVCC AQKLVHISFL CSAALRVHPS AKCVLCAGGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.71 (PValue = 3.332718e-01)
Components of the Score Function:
Profile Score...............................................: -3.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2690 (length 60 amino acids):
MSSRSSVSPS RASLARALVE ARQRQQSRHA SSAQLQRYLL RWFPRGLWSF IYRASPRGGQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -55.58 (PValue = 3.492822e-01)
Components of the Score Function:
Profile Score...............................................: -8.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2640 (length 60 amino acids):
MLCGRESSGR GENAHGGLRS LARTPLELTA LFPFLPLSPN TQLVPPLLSD PLCLPSPSDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -52.80 (PValue = 2.995838e-01)
Components of the Score Function:
Profile Score...............................................: -25.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.46
Term 4 Volume Compensation (-1, 1, 2).....................: -1.47
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.11
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2550 (length 60 amino acids):
MFYTYVEKQG GGFFGSWQTR QVAFDTLRRY LYYSEAVKNE LPVVHSHTSE AVDATTTTTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -60.58 (PValue = 4.461283e-01)
Components of the Score Function:
Profile Score...............................................: -9.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.67
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2540 (length 60 amino acids):
MHPASLRLAN AFRGLLKHGT MPVSIRGLHH VARAVVACLI LVVTATAAAA SIVKYTVTSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -32.99 (PValue = 7.293334e-02)
Components of the Score Function:
Profile Score...............................................: -18.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.81
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.61
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2510 (length 60 amino acids):
MFVRRRGCSL VTLPLPRSLS GTMTPIKLSR LCCASGTGLS PPSVSSATSL RSETPGKVLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -30.74 (PValue = 6.014483e-02)
Components of the Score Function:
Profile Score...............................................: 8.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2440 (length 60 amino acids):
MSKAVQFSVL KQGSLEPGSW TQRVLTIDTK SDTVTISRKH HPEHVFYHSL EVAHVQMWPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -72.65 (PValue = 6.827280e-01)
Components of the Score Function:
Profile Score...............................................: -13.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.03
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2340 (length 60 amino acids):
MSPPASAVCS ACARPSGVPR SRASQQLCLQ TPLHEAGKSA VCRREGVLSA LLFHSPPLSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -21.69 (PValue = 2.586481e-02)
Components of the Score Function:
Profile Score...............................................: -3.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.47
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2310 (length 60 amino acids):
MARARFLQLL LVTLTLLSVA ALPVSAWWSK GHMSVALIAK RHMGASLVEK AELAAKVLSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -35.35 (PValue = 8.868099e-02)
Components of the Score Function:
Profile Score...............................................: -2.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -20.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2280 (length 60 amino acids):
MGQWLASAFS SLMGKKEVRI VMVGLDAAGK TTIIYKLKLG EVVTTTPTIG FNVETVEYKN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -70.68 (PValue = 6.468273e-01)
Components of the Score Function:
Profile Score...............................................: -10.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2150 (length 60 amino acids):
MAGVDKAMVT LSNGVKMPQF GLGVWQSPAG EVTENAVKWA LCAGYRHIDT AAIYKNEESV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -70.22 (PValue = 6.381308e-01)
Components of the Score Function:
Profile Score...............................................: -4.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.90
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1930 (length 60 amino acids):
MAYNQKQLEA YRQLIAEGKP FRSITCPYCN GRRDATVKHV HPSTKPPSAW GFWNDVLVRK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -63.43 (PValue = 5.037754e-01)
Components of the Score Function:
Profile Score...............................................: -18.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1860 (length 60 amino acids):
MILFQYVFPC YPQQTASERA SLAERATNSS SNVASTANLS GSATTSPGTS HIGDVGGSIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -33.49 (PValue = 7.606247e-02)
Components of the Score Function:
Profile Score...............................................: 4.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.84
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1790 (length 60 amino acids):
MSNRSADSCP RTCRGQQREE YPDHASSHTM TVGAAHTAKP TATSRSAEQR PQRQSHSQPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -84.23 (PValue = 8.488062e-01)
Components of the Score Function:
Profile Score...............................................: -14.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -17.17
Term 14 Hydrophobicity of Tail [26..end]...................: -5.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1550 (length 60 amino acids):
MSRNGELCLQ RIIVSYSPNK GNPAMRQFMA THLPEFHRQY PQVKIDIRPR QWPESSITGI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -82.76 (PValue = 8.323325e-01)
Components of the Score Function:
Profile Score...............................................: -16.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.18
Term 4 Volume Compensation (-1, 1, 2).....................: -8.20
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.71
Term 14 Hydrophobicity of Tail [26..end]...................: -1.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1480 (length 60 amino acids):
MQQRLQQYQE EQYLQLSLNS LGVLTSYWPS RAPLGFAAAH PRCRIAAEAR LLGTHIHDDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -66.07 (PValue = 5.570227e-01)
Components of the Score Function:
Profile Score...............................................: -8.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.68
Term 14 Hydrophobicity of Tail [26..end]...................: -2.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1395 (length 60 amino acids):
MPHSPQSTGQ ITCQQCHVTL AYPIGAPSVR CPMCAAVTPV QQFSVTCVCC RCILILPQNT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -26.94 (PValue = 4.279440e-02)
Components of the Score Function:
Profile Score...............................................: -6.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.35
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1210 (length 60 amino acids):
MRIEVKFGSA KHDIEVPEDA TLGTLKAAIY DATNVLPPLQ KLLGKPNLQA KPDDTLLSAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -45.14 (PValue = 1.847813e-01)
Components of the Score Function:
Profile Score...............................................: -19.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.74
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -21.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0530 (length 60 amino acids):
MNPSEHHTNR TPTLFQRPSG VFNRPMGFSP AQRTHSVSPD STAMSQDSPA RIGSFATTFF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -37.69 (PValue = 1.068173e-01)
Components of the Score Function:
Profile Score...............................................: -1.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.47
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1040 (length 60 amino acids):
MSSARSEGSE RSPDEVPSLM SSTTPLAAVA PVDSIGVKAS PAASLLTAIC SPTQTISNVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -29.76 (PValue = 5.519500e-02)
Components of the Score Function:
Profile Score...............................................: -4.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1170 (length 60 amino acids):
MSAINSLHFI FKGKNYMVPE SFVTKEHPGG KAVLMALADK DITEAFEEAG HSNDAMEMLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -72.22 (PValue = 6.749131e-01)
Components of the Score Function:
Profile Score...............................................: -6.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.26
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -1.74
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.78
Term 14 Hydrophobicity of Tail [26..end]...................: -2.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1100 (length 60 amino acids):
MFVFEPAAPS SAAADVSACA SFSDAEPYKS LCMKWGLLRL GEWNMHTYRY RCPSEVRSFT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -96.54 (PValue = 9.411484e-01)
Components of the Score Function:
Profile Score...............................................: -26.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.53
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.15
Term 14 Hydrophobicity of Tail [26..end]...................: -2.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1080 (length 60 amino acids):
MSRSQLSIDL EDFLGYEAPI PTDAFVVGIR PRAPLPRRST HAYDGNGSDL SDLSSRPNSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -54.03 (PValue = 3.210656e-01)
Components of the Score Function:
Profile Score...............................................: 0.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1060 (length 60 amino acids):
MWASSLTSPA LGKVRLTEES WISLDARGVL GEDVTAQFVR WLCESVLPAD SVLREQLEAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -65.63 (PValue = 5.483318e-01)
Components of the Score Function:
Profile Score...............................................: -17.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1050 (length 60 amino acids):
MSAVAHEFET PAEVRPSGQN GINMAAAPPA REDGFSVSAT ELASKPHPNR AIQSTVSVPH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -49.00 (PValue = 2.382308e-01)
Components of the Score Function:
Profile Score...............................................: -12.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.79
Term 14 Hydrophobicity of Tail [26..end]...................: -1.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1010 (length 60 amino acids):
MDTRGLRHLK SYLGKEGEQL ARAKRASDVV PVLAARQAAA AAAARATAAD VTTVSNTVPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -35.86 (PValue = 9.237077e-02)
Components of the Score Function:
Profile Score...............................................: -6.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.73
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0930 (length 60 amino acids):
MGNRQSSVPL EGEGHPEVFY RGVKAAQEGR FTVSEVYFVQ ALTRHPGRRF WDTFTRAVLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -58.46 (PValue = 4.042388e-01)
Components of the Score Function:
Profile Score...............................................: -8.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.51
Term 4 Volume Compensation (-1, 1, 2).....................: -6.38
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.04
Term 14 Hydrophobicity of Tail [26..end]...................: -0.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0600 (length 60 amino acids):
MACTASEASA PPQLLSENAE KHCAADIYAL HHRLGRCVKQ VERLTSSSAG GSSLSHHKGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -53.24 (PValue = 3.070933e-01)
Components of the Score Function:
Profile Score...............................................: 6.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.16
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.12
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0560 (length 60 amino acids):
MSKPVKSKTT GKNIGYGKVI LFGEHFVVHG AEAIVAGISE YTECRLEINP GVPGLQVDDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -68.06 (PValue = 5.965816e-01)
Components of the Score Function:
Profile Score...............................................: -25.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.15
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0520 (length 60 amino acids):
MRVAPLYSLS CSFPFLARSP SFAPHHAPHP FTPTQCIPEQ RRVLTVRRRR AILPVVRFRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.70 (PValue = 6.282832e-01)
Components of the Score Function:
Profile Score...............................................: -21.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -9.27
Term 4 Volume Compensation (-1, 1, 2).....................: -4.72
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0780 (length 60 amino acids):
MGRLEVCICG ACNIGGTRKA GIPDPYVKVV MGDRKKAHIK YKTKVVSSSL NPVWNEVLTF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -43.28 (PValue = 1.622092e-01)
Components of the Score Function:
Profile Score...............................................: 1.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0490 (length 60 amino acids):
MGACCCKNPT SSVAMAVGEG AESIPQGGEG SGGAPTSSTF SDPSAHSFAL PSHSEDETVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -62.34 (PValue = 4.815786e-01)
Components of the Score Function:
Profile Score...............................................: 1.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.20
Term 14 Hydrophobicity of Tail [26..end]...................: -3.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0240 (length 60 amino acids):
MFSPHVHLRM LAHCPPRRTR CGPLHGELKS PRSSLYFHRS ENQRLACPHN VDVDVEVYLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -41.55 (PValue = 1.431909e-01)
Components of the Score Function:
Profile Score...............................................: -7.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.54
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0180 (length 60 amino acids):
MDKVLAYLQG ALLDQYLELL PSRWSALLPR LAKLTQRLHA VTDLTTVDEL DSAVEDGFRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.24 (PValue = 6.000859e-01)
Components of the Score Function:
Profile Score...............................................: -17.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.66
Term 4 Volume Compensation (-1, 1, 2).....................: -1.41
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0140 (length 60 amino acids):
MAKIKVKWGK ENLTMEVDLG STVGAFKEAL KAETGVPVEK QKLMGLKPSM NKDDATLSAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -64.07 (PValue = 5.167949e-01)
Components of the Score Function:
Profile Score...............................................: -15.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.24
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.29
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0100 (length 60 amino acids):
MKRTLSLGIE GSANKIGVGV VDQSGTVLSN VRETYITPPG SGFLPRETAI HHSQHVLQVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -33.94 (PValue = 7.895726e-02)
Components of the Score Function:
Profile Score...............................................: -5.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.92
Term 14 Hydrophobicity of Tail [26..end]...................: -0.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0090 (length 60 amino acids):
MSRAHKDHTW MKNHPLEGDD IVAGLYNILS KRNPKTMKAC RGIRIPDTVV FEHNFPRGWY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -78.58 (PValue = 7.781091e-01)
Components of the Score Function:
Profile Score...............................................: -15.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.20
Term 14 Hydrophobicity of Tail [26..end]...................: -4.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1420 (length 60 amino acids):
MTATESKGFA ELYHQLLQDG VQLQKELEAY YLRQEGYIRK RVAVLDEMQE NIADERRCLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -91.19 (PValue = 9.098465e-01)
Components of the Score Function:
Profile Score...............................................: -15.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.32
Term 4 Volume Compensation (-1, 1, 2).....................: -4.28
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -64.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1410 (length 60 amino acids):
MSEREHDETP VTAEGSAAAH EGSNMDLNGN ESRASYIKTD LGELNMIESM CPKCQETGTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -72.00 (PValue = 6.710907e-01)
Components of the Score Function:
Profile Score...............................................: -15.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.82
Term 14 Hydrophobicity of Tail [26..end]...................: -3.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1380 (length 60 amino acids):
MDALFLTSAG TDGHPLAQPF WSSSRSSLPT FDAHRRGTAR GRLQNPALID SIRRSEGSRV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -65.50 (PValue = 5.457079e-01)
Components of the Score Function:
Profile Score...............................................: -20.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.57
Term 14 Hydrophobicity of Tail [26..end]...................: -3.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1160 (length 60 amino acids):
MTNPSNSNLQ ALREELCTPG LDQGHLFEGW PETVDECNER QIALLTDLYM FSNMYPGGVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -72.32 (PValue = 6.767521e-01)
Components of the Score Function:
Profile Score...............................................: -29.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.70
Term 4 Volume Compensation (-1, 1, 2).....................: -0.81
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.19
Term 14 Hydrophobicity of Tail [26..end]...................: -1.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1140 (length 60 amino acids):
MNEIPSSGEV FRGEDGTVST ILPSNYGQDY EASEGELEEY AEYIGIDSAK EPELMWIAKE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -63.34 (PValue = 5.018323e-01)
Components of the Score Function:
Profile Score...............................................: -2.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.13
Term 14 Hydrophobicity of Tail [26..end]...................: -1.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1130 (length 60 amino acids):
MRLWASPPSL PPPPFFPSQL QQPLLPAAAA TAMMRPTRRA FFDSFRAARG ELDHLFSSMK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -59.53 (PValue = 4.251698e-01)
Components of the Score Function:
Profile Score...............................................: -14.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.69
Term 14 Hydrophobicity of Tail [26..end]...................: -2.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1120 (length 60 amino acids):
MLRSLHRTAP LAVTATTTTL SASAVPLALQ TAARTKYVRQ PSAQWDPVHE DINAHVKRRI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -62.32 (PValue = 4.811843e-01)
Components of the Score Function:
Profile Score...............................................: -16.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.96
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0990 (length 60 amino acids):
MASAPPIDLE GFCLAVRYNV FANYRTLPVR CAQRSYEQLP VRYRAGLEAI SADVLQQQQH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -80.23 (PValue = 8.008368e-01)
Components of the Score Function:
Profile Score...............................................: -11.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.44
Term 4 Volume Compensation (-1, 1, 2).....................: -2.38
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -56.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0980 (length 60 amino acids):
MQPPPKPLCD LNDTWEDVLT AFNDCLKGES TWSCHCLDGI DKEVILSAPE IMDPKTDSGF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -78.76 (PValue = 7.806112e-01)
Components of the Score Function:
Profile Score...............................................: -8.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.19
Term 14 Hydrophobicity of Tail [26..end]...................: -3.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1040 (length 60 amino acids):
MPDPAAPSTL SPPQRTAVLR PRDQLAEVGR CHSTGRTIRL CYNTFGAAKN PCVLLVMGLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -21.51 (PValue = 2.540812e-02)
Components of the Score Function:
Profile Score...............................................: 4.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1030 (length 60 amino acids):
MYGGYYVMGS GMHQGGGYGG GPMMQQQQCQ HPQLQQNVQQ PPPPPHVQAR LRSSGRGGVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -76.33 (PValue = 7.443471e-01)
Components of the Score Function:
Profile Score...............................................: -12.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.46
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.63
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0910 (length 60 amino acids):
MKLTLRGGIA LAGAMLLAIA GFSLFEACVV LALYLAKYVF GDGALMPLYR LANMHHDFMQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -86.36 (PValue = 8.702457e-01)
Components of the Score Function:
Profile Score...............................................: -12.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.64
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.47
Term 9 Volume Limitation [3..8]...........................: -0.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.18
Term 14 Hydrophobicity of Tail [26..end]...................: -5.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0830 (length 60 amino acids):
MSLAHKIFAT LKASGDSTFP SPAAPTSGQS ETATTTSASP SGSWNERFYH IAVQGCCHGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -59.39 (PValue = 4.223943e-01)
Components of the Score Function:
Profile Score...............................................: -10.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0690 (length 60 amino acids):
MPAALLREAR EVVQEAKESF TKPWRVQDQQ REDTLLHLLN LRRSKLAAVA QLVAELRQVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -52.36 (PValue = 2.920811e-01)
Components of the Score Function:
Profile Score...............................................: -11.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.33
Term 4 Volume Compensation (-1, 1, 2).....................: -2.12
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -10.67
Term 9 Volume Limitation [3..8]...........................: -1.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0790 (length 60 amino acids):
MERLQRVGVR TGPTFAADAP ASTSELPKPT FQPGSSIYEM DSSGRLHRFQ CGRVLGRGGF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -44.89 (PValue = 1.816654e-01)
Components of the Score Function:
Profile Score...............................................: -2.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0460 (length 60 amino acids):
MEEDLHREQR RRTYVHAATA EDANKEAVST HVSGYNPWEV LGLKPGASTQ TIRLRYHELM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -64.51 (PValue = 5.256951e-01)
Components of the Score Function:
Profile Score...............................................: -3.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.46
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0430 (length 60 amino acids):
MMSRLPHFRS DSDFHRDEES SQSMSQVRAR PAIRLDTSLS FISTTSIRAG TASGPASPLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -38.42 (PValue = 1.130570e-01)
Components of the Score Function:
Profile Score...............................................: 2.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0240 (length 60 amino acids):
MRHTASSGGF YRFAATASSP FPQLPARWLR QPDASSSPWP LQPHDQRQQQ TATTRSPTQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -82.33 (PValue = 8.272341e-01)
Components of the Score Function:
Profile Score...............................................: -17.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0130 (length 60 amino acids):
MRALLPPRSV LDAPLFVVVA VMLLLHGAPA RGYDGDAVTA PPSASTAFTE HPFTLPAAAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -26.65 (PValue = 4.166585e-02)
Components of the Score Function:
Profile Score...............................................: 3.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0100 (length 60 amino acids):
MVRYPIIASA PGDSSTQTSL PYGIGPSAAA KQSTYLPALL AAAQQTSPIA AKSGQSTFPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -39.87 (PValue = 1.263602e-01)
Components of the Score Function:
Profile Score...............................................: -0.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0237 (length 60 amino acids):
MCADATHPRR ACWCGAGGVA GCVRQQHAYR CSRLLAGVLL IVGALTLAVS TAPTAWAAGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -35.58 (PValue = 9.030334e-02)
Components of the Score Function:
Profile Score...............................................: -22.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.46
Term 4 Volume Compensation (-1, 1, 2).....................: -1.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.43
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.30
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0040 (length 60 amino acids):
MRRWTASAAP AAVQRQSCLL ALRCATTGVQ HSYKPGCFVL ALRSLFVTLT PTSLKRRIAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -45.98 (PValue = 1.955605e-01)
Components of the Score Function:
Profile Score...............................................: -7.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.28
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0790 (length 60 amino acids):
MFTHTVPSRH TAAAGAASAG STSSSSTHSV RMHGPLQAST RGASGVPAAP ATAATNSSNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -45.40 (PValue = 1.881264e-01)
Components of the Score Function:
Profile Score...............................................: 1.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.44
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0750 (length 60 amino acids):
MSLPSMSMHW SEGDNGGGSL GGSRRSFSKG SIYRHHFLSL DHSSTAGSAI GFSRAATHDR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -73.62 (PValue = 6.996999e-01)
Components of the Score Function:
Profile Score...............................................: -8.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.53
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.31
Term 14 Hydrophobicity of Tail [26..end]...................: -3.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0680 (length 60 amino acids):
MGSSAMSASP FSAVNGFRGS DDDDDDDGRT ALSQVRQALA DRRRMRSGVI AGVVDPVAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -37.82 (PValue = 1.079823e-01)
Components of the Score Function:
Profile Score...............................................: -17.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0650 (length 60 amino acids):
MLRRTSAVAA TAALPHNMTM KDPLCQQVLS RCTPVVYSAL PNGFRVATEY VKDCPFATVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -67.00 (PValue = 5.756056e-01)
Components of the Score Function:
Profile Score...............................................: -9.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.77
Term 5 Volume Compensation (-1, 2)........................: -2.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.17
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0630 (length 60 amino acids):
MLASSLHTAA AAAAAAATVT RFVTHSSNLS SRVTGSGACE PCSAPRACPR ERAMQHALVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.14 (PValue = 2.254963e-01)
Components of the Score Function:
Profile Score...............................................: -2.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1010 (length 60 amino acids):
MASVVVVSAS YDKQIRLWDA TSGRTVKSFI FQDSQINSLF LLPDTGYLAV AGFGALRLYD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -42.40 (PValue = 1.523684e-01)
Components of the Score Function:
Profile Score...............................................: -7.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.65
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -3.25
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.84
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0848 (length 60 amino acids):
MSMYQSLIPA DARRAECERV RREHPEQLPV VVESANSSHV RFLAVQRDAT VADLEAEVRQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -56.94 (PValue = 3.747451e-01)
Components of the Score Function:
Profile Score...............................................: -7.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.56
Term 9 Volume Limitation [3..8]...........................: -1.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0880 (length 60 amino acids):
MSAYHSSNPV EARRAECARL QAKYPGHVAV VVEAAEKAGS KVHFLALPRD ATVAELEAAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -56.61 (PValue = 3.685494e-01)
Components of the Score Function:
Profile Score...............................................: -11.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -1.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0843 (length 60 amino acids):
MCREPYLLLS MHRLLLAAYW PDSDRLHCSE REWPLTEHSG AVPFMVESAN GRVLPWCPWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -47.22 (PValue = 2.124395e-01)
Components of the Score Function:
Profile Score...............................................: -1.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.72
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0710 (length 60 amino acids):
MVNVCVVGAA GGIGQSLSLL LVRQLPYGST LSLFDVVGAA GVAADLSHVD NAGVQVKFAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -47.42 (PValue = 2.152557e-01)
Components of the Score Function:
Profile Score...............................................: -6.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.17
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -1.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0700 (length 60 amino acids):
MAILTVSDEH PSHITTLDPS KGYQPKATYV FDRCFNSATA CVTEEAQRLL LGNGKDVGTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -33.29 (PValue = 7.478761e-02)
Components of the Score Function:
Profile Score...............................................: -14.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -3.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0660 (length 60 amino acids):
MSKSRRDVNK VQIGYHRAEN TETVSSPHTY AYSSGKSAPS TTKPDRPTVS NIRIASAVAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -42.65 (PValue = 1.551360e-01)
Components of the Score Function:
Profile Score...............................................: -11.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0580 (length 60 amino acids):
MMAASASTLT DTERTGTAGA SFITSSASPM TPNPAVSYTR VSKSPAAVWS AAATVLPASQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -26.25 (PValue = 4.015459e-02)
Components of the Score Function:
Profile Score...............................................: 6.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.60
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.13
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0380 (length 60 amino acids):
MSDGSALWSV SGRCPSVQSF QSRATSHSTT KARGRTGSLS SQPAAAFSSP RSSSFSHLRP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -55.15 (PValue = 3.413678e-01)
Components of the Score Function:
Profile Score...............................................: -6.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0200 (length 60 amino acids):
MSANNNSAAA PKKARQDMPK LGFWEEFMIS GVAAGAAKTA AAPIERVKLL VQNQGEMIKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -37.17 (PValue = 1.025883e-01)
Components of the Score Function:
Profile Score...............................................: -13.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.25
Term 14 Hydrophobicity of Tail [26..end]...................: -3.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0030 (length 60 amino acids):
MASSRKASNP HKSHRKPKRS WNVYVGRSLK AINAQMSMSH RTMKIVNSYV NDVMERICTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -74.17 (PValue = 7.090464e-01)
Components of the Score Function:
Profile Score...............................................: -31.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2630 (length 60 amino acids):
MEEFHYEEVQ LSEMTLEDGV LRFPCPCGDL FELLLEDFIS GSDVAQCPTC SLTIKVLFSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -32.82 (PValue = 7.190463e-02)
Components of the Score Function:
Profile Score...............................................: -5.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2490 (length 60 amino acids):
MLSNTLTKVC EENGRLSGQI SALEEKVQAL AQEPLKETPV LQSLFEPEKT GWFGGSKSAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -83.97 (PValue = 8.459704e-01)
Components of the Score Function:
Profile Score...............................................: -12.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.95
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2470 (length 60 amino acids):
MFHTAFLAAS KRRLRWRCCQ CTRLLPSEHF PKRSGPLNTM VCVDCKEMCF GCGLRLLRSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.86 (PValue = 2.835766e-01)
Components of the Score Function:
Profile Score...............................................: -15.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.29
Term 4 Volume Compensation (-1, 1, 2).....................: -1.14
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2440 (length 60 amino acids):
MVALKTPTSS SVHPVKASVS ARPSSQIAAA DQIAVELLQA LCYAEVQEAQ EWLAGAGNAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -57.09 (PValue = 3.777527e-01)
Components of the Score Function:
Profile Score...............................................: -20.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1760 (length 60 amino acids):
MLTTAVMDDC RQGRQDRCNT QDTATVTGCT VQRARHALSP SLRVKACSPR QPCSANIVNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -47.40 (PValue = 2.148870e-01)
Components of the Score Function:
Profile Score...............................................: -1.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1665 (length 60 amino acids):
MSVHVMPRIS EAGNPRGATP WLLFLTSASI MQYVTTCSCI APLSITTSFT TITCFKCHAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -43.25 (PValue = 1.619449e-01)
Components of the Score Function:
Profile Score...............................................: 3.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.62
Term 14 Hydrophobicity of Tail [26..end]...................: -3.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1630 (length 60 amino acids):
MADSKKDNKK TEEVVTQGTD QAQVGLIIKV LGRTGSRGNV TQVRVRLMAE AGSPDYNRTI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.17 (PValue = 4.783057e-01)
Components of the Score Function:
Profile Score...............................................: -5.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.82
Term 4 Volume Compensation (-1, 1, 2).....................: -1.23
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.70
Term 14 Hydrophobicity of Tail [26..end]...................: -3.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1470 (length 60 amino acids):
MMNLAPDTIT IGAQRNTELL LLEYLRSTNP HIHALWQRHP NKDNDASSSS AASSPSKDTR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -72.10 (PValue = 6.727818e-01)
Components of the Score Function:
Profile Score...............................................: -12.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.49
Term 14 Hydrophobicity of Tail [26..end]...................: -4.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1420 (length 60 amino acids):
MAHAAGGRNA AGAAPQYYDP NAPLTRPVTT IQVETFLPRE GMTPSLVLAD GSHYFGPVVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -60.12 (PValue = 4.368914e-01)
Components of the Score Function:
Profile Score...............................................: -26.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.80
Term 4 Volume Compensation (-1, 1, 2).....................: -5.76
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.27
Term 14 Hydrophobicity of Tail [26..end]...................: -1.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1390 (length 60 amino acids):
MKRLPPSLYV SCYYRSYSCR TAAGGSGDML RCRISPVPSA RTSGVVCGIG SNPPPGASRE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.67 (PValue = 4.480520e-01)
Components of the Score Function:
Profile Score...............................................: -1.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.27
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.15
Term 14 Hydrophobicity of Tail [26..end]...................: -3.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1290 (length 60 amino acids):
MRTSTVSSAT SCGRPVTLLE AFASSAAALR QFGIPRVRVV GLSEGCTQED YERQRARPDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -86.63 (PValue = 8.728393e-01)
Components of the Score Function:
Profile Score...............................................: -10.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.73
Term 14 Hydrophobicity of Tail [26..end]...................: -4.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1260 (length 60 amino acids):
MSDSLLNHCC LFEHYDDQQQ SQQAVAAGGG GTLNCLVETH KGKRIASAET ALTTARGSDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -52.51 (PValue = 2.946395e-01)
Components of the Score Function:
Profile Score...............................................: -6.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.53
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1250 (length 60 amino acids):
MQVSLHNTVK TYNLTAGKSL PEWLSERRKN KRASAGQENR VELLHDLEFP HCARCIFRCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -51.77 (PValue = 2.821521e-01)
Components of the Score Function:
Profile Score...............................................: -7.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.26
Term 14 Hydrophobicity of Tail [26..end]...................: -1.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1220 (length 60 amino acids):
MSSTDIRSTN DITSTAVSDT NDSLATSSGG ANNTANTLTT DVIIRECIKQ GFYRNPICNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -74.78 (PValue = 7.192286e-01)
Components of the Score Function:
Profile Score...............................................: -4.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.33
Term 14 Hydrophobicity of Tail [26..end]...................: -3.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1700 (length 60 amino acids):
MVHLCVWWRG AISAGVLGER VEQLARLVAD VKHPSEHNTV STCLSSGAGP GAGGHDVDDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -42.77 (PValue = 1.564399e-01)
Components of the Score Function:
Profile Score...............................................: 1.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1690 (length 60 amino acids):
MRPNVLCRRL VRTLFSIRYF LFKERIMGEK PPSKKGSVGD IAMPQPVEET AATAAVSTLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -48.18 (PValue = 2.260448e-01)
Components of the Score Function:
Profile Score...............................................: -5.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2305 (length 60 amino acids):
MLGRRVFSST AIPRCMYTRL HISSPVQAAR MLPVLVPLTP SLSHSIGGMM NAVAQGSLES
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -48.72 (PValue = 2.340034e-01)
Components of the Score Function:
Profile Score...............................................: 0.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -1.25
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2220 (length 60 amino acids):
MPREIKTLKE FLAICSRKDA RCVKVKHNPS ATKFKVRCSR YLYTLVVNDK KKADKIERSI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -81.14 (PValue = 8.126774e-01)
Components of the Score Function:
Profile Score...............................................: -17.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.75
Term 4 Volume Compensation (-1, 1, 2).....................: -2.15
Term 5 Volume Compensation (-1, 2)........................: -2.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.66
Term 14 Hydrophobicity of Tail [26..end]...................: -1.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2130 (length 60 amino acids):
MATSAPLSKS SSPPKQQPNA AVAKRGATLT GKPKSTSTLT SHKDPVVYHG SVILNNLPVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -32.13 (PValue = 6.780789e-02)
Components of the Score Function:
Profile Score...............................................: -16.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.86
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2110 (length 60 amino acids):
MSDRSLHGGH TTIHSNSAYH DAAKEERQHQ EQRKSCMRGS HAAVERMTAV QVVDRLCWWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -50.12 (PValue = 2.554893e-01)
Components of the Score Function:
Profile Score...............................................: -10.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.33
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -4.72
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.31
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2060 (length 60 amino acids):
MGCKSFKGRL GPLHRGDASG PDDPLASGKK GKALHNVNGV VFRGVGAPAQ NNGKAGDKGI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -64.42 (PValue = 5.237205e-01)
Components of the Score Function:
Profile Score...............................................: -15.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.26
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1830 (length 60 amino acids):
MTDIFSSLLG DPVRDVVTEG DGECGNTRQS ATAGVACSPC PAPSLPRHCS AAPPSPSSPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -38.11 (PValue = 1.104078e-01)
Components of the Score Function:
Profile Score...............................................: 7.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.90
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2900 (length 60 amino acids):
MFLCNLLMVD LCLRAYTVFK WLWACVAQTF DRYTAPTIEV PLPEVNFTAA PAVEPLHPRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -71.97 (PValue = 6.705554e-01)
Components of the Score Function:
Profile Score...............................................: -11.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.43
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.67
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2870 (length 60 amino acids):
MFSLLNNWVE SAADAVKSVS SKGIDAVRQT GVLDALESVS VNPNSAAAAA APQEKTLSVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -28.15 (PValue = 4.779661e-02)
Components of the Score Function:
Profile Score...............................................: 3.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.85
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2830 (length 60 amino acids):
MSSLKDAPSL SPTSRKGFSF AAIDYDDDYI GPAEMVEEMH HPSKSTSRSK KNKARDSKKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -86.27 (PValue = 8.694085e-01)
Components of the Score Function:
Profile Score...............................................: -11.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.86
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.73
Term 14 Hydrophobicity of Tail [26..end]...................: -4.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -62.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2780 (length 60 amino acids):
MGGQAVMHEL PSTARLSSEL CATFSEYLES ACPHSGPLSW NEAAQLLSAF TGGSVHHITA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -56.45 (PValue = 3.654893e-01)
Components of the Score Function:
Profile Score...............................................: -11.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2480 (length 60 amino acids):
MFARRVCGSA AASAACLARH ESQKVQGDVI GVDLGTTYSC VATMDGDKAR VLENSEGFRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -63.63 (PValue = 5.078434e-01)
Components of the Score Function:
Profile Score...............................................: -16.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.88
Term 14 Hydrophobicity of Tail [26..end]...................: -4.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2460 (length 60 amino acids):
MFARRVCGSA AASAACLARH ESQKVQGDVI GVDLGTTYSC VATMDGDKAR VLENSEGFRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -63.63 (PValue = 5.078434e-01)
Components of the Score Function:
Profile Score...............................................: -16.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.88
Term 14 Hydrophobicity of Tail [26..end]...................: -4.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2430 (length 60 amino acids):
MFKSSLATHS SIDHDLFPLL TVRSCVSEAD ESKNGPRFCA EDKMTGGAYE IRSRKLDLEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -40.90 (PValue = 1.365239e-01)
Components of the Score Function:
Profile Score...............................................: 1.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2380 (length 60 amino acids):
MSAHDSSAMA LIAHMNDIEQ QRRVLSMSQR EQEAKIAFTT AEKEQLVQAA KAAEAEEAQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -65.48 (PValue = 5.453152e-01)
Components of the Score Function:
Profile Score...............................................: -10.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.85
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2310 (length 60 amino acids):
MHTKVLAPLA GNRIQAAHKF PQVRLQPTLH RLMTRRRQCN LPLRLFHPSS VDFAKHELEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -71.23 (PValue = 6.569242e-01)
Components of the Score Function:
Profile Score...............................................: -14.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2170 (length 60 amino acids):
MGTKDKEVMY DPGYDKEYYG EDEDEYAYEE QEAAATVVPS ASVAAEQKYV QCEERTMDVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -81.37 (PValue = 8.154868e-01)
Components of the Score Function:
Profile Score...............................................: -10.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.58
Term 14 Hydrophobicity of Tail [26..end]...................: -3.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2100 (length 60 amino acids):
MSALWARFTE KLKGSGYTLS DLVYCSEDTF LTLVANMNAF TPLQIASLAK EWQRSLSAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -55.43 (PValue = 3.465406e-01)
Components of the Score Function:
Profile Score...............................................: -6.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.43
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -3.25
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2065 (length 60 amino acids):
MKFTHREIED DRRKPVGSLF MHLIDRDSMP SRSHRNLAAQ KLNAHSLPNT ELSLYAQDAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -51.34 (PValue = 2.749504e-01)
Components of the Score Function:
Profile Score...............................................: -7.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.00
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2050 (length 60 amino acids):
MTTTIKDDAS LPSIDDIPAP SVWLKSLCRR LAAVGIIVPV SLQLFRKSGT YTDIFQYHPI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.16 (PValue = 3.414949e-01)
Components of the Score Function:
Profile Score...............................................: 0.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.93
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1990 (length 60 amino acids):
MSLSPYTIDV GPCKADGRRD VFLQCHQRPC FSTTHRGITR VCLAKWPARS RTDMALETND
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -66.46 (PValue = 5.648816e-01)
Components of the Score Function:
Profile Score...............................................: -13.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.73
Term 4 Volume Compensation (-1, 1, 2).....................: -1.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.26
Term 14 Hydrophobicity of Tail [26..end]...................: -2.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1930 (length 60 amino acids):
MLRRTLLRFK PTILTAAEAL QDVKDGATIA LGGFGLCGFP FELLEALNQK GTKQLTLIAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -40.04 (PValue = 1.279531e-01)
Components of the Score Function:
Profile Score...............................................: -10.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1860 (length 60 amino acids):
MTVRELAKGA MMRYMLSLRR TAKEADAVVR QLCRSGIAVT DVYVLVPSDA ARSTTLEDDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -74.65 (PValue = 7.171099e-01)
Components of the Score Function:
Profile Score...............................................: -2.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.17
Term 14 Hydrophobicity of Tail [26..end]...................: -2.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1850 (length 60 amino acids):
MSDAPAATAA AEAATTARTE NPVAVCPATP PPTNCIGSVW LGVYDRVSHT RFRIHIEDPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -64.96 (PValue = 5.348079e-01)
Components of the Score Function:
Profile Score...............................................: -10.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.56
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1637 (length 60 amino acids):
MLRCLNGSML RPTRGAASLA AATAPAAIAL PARQFHSVYG VIGSCLMCGA CMLCFGSWAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -44.79 (PValue = 1.803830e-01)
Components of the Score Function:
Profile Score...............................................: -10.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.44
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1330 (length 60 amino acids):
MIGAPWPPEA VFGNTVDRVA SPAPVPERKI SIADQLHLPL SRFVEKMSWG EKRRVQILHG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -71.47 (PValue = 6.614641e-01)
Components of the Score Function:
Profile Score...............................................: -10.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.89
Term 4 Volume Compensation (-1, 1, 2).....................: -3.77
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1180 (length 60 amino acids):
MPIISHEVQA LRRCTTPYIP LIFRNWNRLV LVPYRLAMWC VHFSTLICVT RGSDRMIRVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -67.74 (PValue = 5.902764e-01)
Components of the Score Function:
Profile Score...............................................: -14.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.60
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -5.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1080 (length 60 amino acids):
MTCSSDNGTA IKRALAHNTT AKPLSNARTV SWTARSAAQR ESADVEARMR AITAAIVSSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -17.73 (PValue = 1.716607e-02)
Components of the Score Function:
Profile Score...............................................: -1.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1030 (length 60 amino acids):
MRGAPTYATA LGSACLPFAL DCDAILQASR RYSSTSAHGA RSSAAASTSK LNYYRNLGVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -48.65 (PValue = 2.329907e-01)
Components of the Score Function:
Profile Score...............................................: -2.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0900 (length 60 amino acids):
MENSPPPQPR EVHIDLCGIE GDAPQPPAPR FETPNGTAAE PPREKLEESC DAVKATQNSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -67.39 (PValue = 5.832842e-01)
Components of the Score Function:
Profile Score...............................................: -13.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.47
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0870 (length 60 amino acids):
MANKKSFYNQ EYSKHVGAVI LFIVSFVAMT FTVCGTPLGM LMIRSWGEDL SGSSAELELN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.83 (PValue = 4.511088e-01)
Components of the Score Function:
Profile Score...............................................: -11.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.96
Term 4 Volume Compensation (-1, 1, 2).....................: -5.12
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0840 (length 60 amino acids):
MPPSAAKEAL ADAQQQPSWG GGPAAAAQAN HCFGAPLLRS LDGPTATGGV HDDASTALAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -50.05 (PValue = 2.543379e-01)
Components of the Score Function:
Profile Score...............................................: -3.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0730 (length 60 amino acids):
MKALSLRRGL VARASAVAYT SQCWCSTDAK SEKRAEEKEA PSTGTEEVVS AAAVKQLEKE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -66.71 (PValue = 5.698507e-01)
Components of the Score Function:
Profile Score...............................................: -18.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.31
Term 4 Volume Compensation (-1, 1, 2).....................: -0.58
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.17
Term 14 Hydrophobicity of Tail [26..end]...................: -1.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0540 (length 60 amino acids):
MSSDLVDTVP RMEYVDRHEL LRSLLTAEEF RERRQEQLNY STTVYVGNLS FYTTEEQVCN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -59.60 (PValue = 4.265314e-01)
Components of the Score Function:
Profile Score...............................................: -6.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.98
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5000 (length 60 amino acids):
MMSATSSQLS VSCVKKRVKV YRHEPYAASL ITPAPPAEAA LVCCHQRSPK SSASSYATSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -60.00 (PValue = 4.345282e-01)
Components of the Score Function:
Profile Score...............................................: -14.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0530 (length 60 amino acids):
MWFLIALLLG CAFLASLWHS VVRYVPLAIR SPHRCAMKIG VVLGSGGHTS EMLRAITEIP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -32.57 (PValue = 7.037316e-02)
Components of the Score Function:
Profile Score...............................................: 2.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -22.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4990 (length 60 amino acids):
MTSHVTAHDV GGNEDIGTDH VPWYKQPLPL CTQVMRFILL LLLTVMFLGV AILVANARMP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -27.10 (PValue = 4.345595e-02)
Components of the Score Function:
Profile Score...............................................: -6.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.50
Term 4 Volume Compensation (-1, 1, 2).....................: -2.45
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.16
Term 9 Volume Limitation [3..8]...........................: -3.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.17
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4940 (length 60 amino acids):
MLDYLIPIGM ALAGIVVMMF IFQSISKSEV GGESIAPARK PRTKRSQRPS QKYTDDVLDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.64 (PValue = 3.691957e-01)
Components of the Score Function:
Profile Score...............................................: -16.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.71
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0480 (length 60 amino acids):
MPGKEKAKRE LHRSNPLGDD IHAERFASAK SASRHAADEN DVDQAGYLIP NHTTKRILRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -55.12 (PValue = 3.407127e-01)
Components of the Score Function:
Profile Score...............................................: -10.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.98
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0370 (length 60 amino acids):
MILTKVEGPN AAGNKVYVFG VNDYRLEVPE RYNVQHFVGR GAYGFVCSAV DAVTNEPVAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -38.24 (PValue = 1.115387e-01)
Components of the Score Function:
Profile Score...............................................: -5.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0360 (length 60 amino acids):
MVVIVLCWAS SITYGFSFPL MHDLGLAYSQ GETVHVLAKS VTSRAKIVPL RWSSVFPCAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -42.26 (PValue = 1.508397e-01)
Components of the Score Function:
Profile Score...............................................: -9.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.31
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0180 (length 60 amino acids):
MRVGYIGLGL MGKPMAVNIL KAGFPVSVWN RTASKCDDLV AAGATACATP AELAAASDVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -26.64 (PValue = 4.165706e-02)
Components of the Score Function:
Profile Score...............................................: -1.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.19
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -13.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0150 (length 60 amino acids):
MACRTLTELS LAFNLLGDEG GRIAAEILGS HPSLRTLDLS DNHIGDLGAV AIAEAFILSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -35.09 (PValue = 8.679910e-02)
Components of the Score Function:
Profile Score...............................................: -4.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.02
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0850 (length 60 amino acids):
MNSPPSSKAP GADSPRSFRA GSEAGTARKP LRLRSPPPTA SRPPPAVISA SASLSPPLPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -21.62 (PValue = 2.567810e-02)
Components of the Score Function:
Profile Score...............................................: -1.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0570 (length 60 amino acids):
MEVIATAHGG PEVLAVRPSS HTPDATQLEG GQVLVHNAYA GVNFIDTYFL SGLYKKPAMP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -53.98 (PValue = 3.201727e-01)
Components of the Score Function:
Profile Score...............................................: -12.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.45
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.27
Term 14 Hydrophobicity of Tail [26..end]...................: -2.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0390 (length 60 amino acids):
MRSNLCTRRS RASYDYLVGA SDGRSLGNTS NNFVYHSNRK PTGGRSLEYL DGDQNRISNV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -66.83 (PValue = 5.722604e-01)
Components of the Score Function:
Profile Score...............................................: -17.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0370 (length 60 amino acids):
MPDKVGIFVE ADVANPNEPA THASTTAAAS TKTADKGTKM VRRRCGRPRK VVVYYFDSDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -77.66 (PValue = 7.646487e-01)
Components of the Score Function:
Profile Score...............................................: -9.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.10
Term 4 Volume Compensation (-1, 1, 2).....................: -3.11
Term 5 Volume Compensation (-1, 2)........................: -7.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.38
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0220 (length 60 amino acids):
MSSPAMLRTS SVLLDKSMFA AKRRVIVPIQ PTPGYPAHFI KASFTTDPLK EKQKARFSSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -72.36 (PValue = 6.774174e-01)
Components of the Score Function:
Profile Score...............................................: -9.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5390 (length 60 amino acids):
MESQSSDFSG LDVDEAFSDD RQDSQTRVLS DDQDYSSDSS EHSSTPRTAP AEGLAQRSAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -41.72 (PValue = 1.450313e-01)
Components of the Score Function:
Profile Score...............................................: -0.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.89
Term 14 Hydrophobicity of Tail [26..end]...................: -0.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5210 (length 60 amino acids):
MRATLRQCNV FDPAFMRKVK RTLSAYKGSM ETSAKKSMSR EAFVDIDEKG AAWYLGHMQS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -77.69 (PValue = 7.650820e-01)
Components of the Score Function:
Profile Score...............................................: -24.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.15
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5090 (length 60 amino acids):
MPSMSRSLHT HNGAPAAKRP RREPAPDISA HVSDITEVKS LVAENNAQSR PKLRLNQRDF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -85.33 (PValue = 8.601904e-01)
Components of the Score Function:
Profile Score...............................................: -5.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.97
Term 4 Volume Compensation (-1, 1, 2).....................: -3.87
Term 5 Volume Compensation (-1, 2)........................: -0.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -1.99
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.79
Term 14 Hydrophobicity of Tail [26..end]...................: -1.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4870 (length 60 amino acids):
MSAAMSRNVP ASFAAKDDDK HYKMCKKIAQ LTKVIYTLNN RCEDNEQRTE WLHQTHMQER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -107.22 (PValue = 9.772672e-01)
Components of the Score Function:
Profile Score...............................................: -20.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.15
Term 4 Volume Compensation (-1, 1, 2).....................: -3.17
Term 5 Volume Compensation (-1, 2)........................: -2.19
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.86
Term 14 Hydrophobicity of Tail [26..end]...................: -6.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -71.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4850 (length 60 amino acids):
MNRAGFDKYI TVFSPEGSLY QVEYAFKAVT YPGLLTVAIR CKDAVLVATQ HVIPDRLMRP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -69.21 (PValue = 6.188321e-01)
Components of the Score Function:
Profile Score...............................................: -21.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4830 (length 60 amino acids):
MHNRVVFYKP LQRQPLSGRI GELMPLGTHP LLCFNPDTVR RMCSRYGVPV DDVVSALRDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -43.80 (PValue = 1.682753e-01)
Components of the Score Function:
Profile Score...............................................: -6.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.31
Term 4 Volume Compensation (-1, 1, 2).....................: -3.35
Term 5 Volume Compensation (-1, 2)........................: -5.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4790 (length 60 amino acids):
MMTITEAIVL EKERQNAARR DALNKRSQNV SRLAEPEPNF PPECCCVKPV IYHNIREQVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -82.72 (PValue = 8.318072e-01)
Components of the Score Function:
Profile Score...............................................: -23.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.29
Term 4 Volume Compensation (-1, 1, 2).....................: -2.68
Term 5 Volume Compensation (-1, 2)........................: -0.19
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4700 (length 60 amino acids):
MPSIPLVTEL GARAGEFQHI LNMSKIPAQV EQKLRPAMDP GELFTYQDSR IFVRARPIVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -44.92 (PValue = 1.819902e-01)
Components of the Score Function:
Profile Score...............................................: -14.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.23
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4670 (length 60 amino acids):
MFSVSEHRLP CDALYSRISA SRSKPLVGFG GRDASIHVYP FMGYTRSAWL QGLSEPITAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -50.14 (PValue = 2.557490e-01)
Components of the Score Function:
Profile Score...............................................: -5.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.17
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.48
Term 14 Hydrophobicity of Tail [26..end]...................: -0.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4650 (length 60 amino acids):
MDTRCCTPPS SGGGDDFVLA SCRHQLFVNE DDHGVENTVL EASVTLRPSE SFPRLSQSHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -56.54 (PValue = 3.671431e-01)
Components of the Score Function:
Profile Score...............................................: -7.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4460 (length 60 amino acids):
MEANVPGAFL HSLIGKNVLV KSKWGPVYEG NLVSCDTFMN LQLRNAVEHA KQDTELGEML
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -55.84 (PValue = 3.541293e-01)
Components of the Score Function:
Profile Score...............................................: -11.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.59
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.61
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4400 (length 60 amino acids):
MSVEKLYDIQ FQLKFTAKQF LKNASRCEKE QKQEMNKCKQ AMEKNNMEGA RIYAQNSIRK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -78.01 (PValue = 7.699072e-01)
Components of the Score Function:
Profile Score...............................................: -15.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.51
Term 14 Hydrophobicity of Tail [26..end]...................: -2.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4180 (length 60 amino acids):
MSAPKEGNRG ESKEKFWLYA FRDHLANLRA FSNCIETADV NGVGDYQLLV ADGSKRIKVY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -59.20 (PValue = 4.187816e-01)
Components of the Score Function:
Profile Score...............................................: -21.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4140 (length 60 amino acids):
MFESLRLLVL SLLYYLGFAY AAFTALKQRS TTVVMAEPSA LSPATANAPR PGTTVEIGIR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -40.29 (PValue = 1.304639e-01)
Components of the Score Function:
Profile Score...............................................: -10.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.11
Term 14 Hydrophobicity of Tail [26..end]...................: -0.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4125 (length 60 amino acids):
MSTAAAPAPK LRSRSVNTTQ GSVPGAKPVP SGAAKVRTRS TRVTPTPFSE VQPRGAATTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -55.25 (PValue = 3.431482e-01)
Components of the Score Function:
Profile Score...............................................: -4.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4110 (length 60 amino acids):
MSLTKGSKAA QDVISFLHTV GRLKVTARQG WVENQICSPE SVSDHMYRMS LMCMMCPDTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -67.83 (PValue = 5.919548e-01)
Components of the Score Function:
Profile Score...............................................: -14.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.63
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.36
Term 14 Hydrophobicity of Tail [26..end]...................: -4.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4060 (length 60 amino acids):
MSSETFRERT LATQYQPRQH LPPNFSDVLK EYAREVLRNQ PSDILEWSAA YFKKLALETD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -71.29 (PValue = 6.580949e-01)
Components of the Score Function:
Profile Score...............................................: -24.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.99
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.92
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4000 (length 60 amino acids):
MPDAQSASPG SVYSGGVPPM VWIQREQQRI PLQFSATGSP NLDGTRLREE GNEAFKAGRY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -61.66 (PValue = 4.679572e-01)
Components of the Score Function:
Profile Score...............................................: -12.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3870 (length 60 amino acids):
MVGEQRDTFV VEYFDPQASL SRTYQFCYFT DDKTIEMYNL KTKRLFLKRC AYPSLSPNEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -80.98 (PValue = 8.106072e-01)
Components of the Score Function:
Profile Score...............................................: -22.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.73
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.86
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2000 (length 60 amino acids):
MLGRKGHWQA VLCIRRPRFL TGGFHSSPPS SLQRVQGPCL DLAAAPAAHE SLAQSPALAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -42.81 (PValue = 1.568603e-01)
Components of the Score Function:
Profile Score...............................................: 2.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3850 (length 60 amino acids):
MFRQSLLRLP WWNFQTEHRQ RCVMMYGGAR TKNTHNANHR VYVRKFKRNA FPNRTRHHWA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -95.79 (PValue = 9.374329e-01)
Components of the Score Function:
Profile Score...............................................: -5.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.00
Term 4 Volume Compensation (-1, 1, 2).....................: -4.45
Term 5 Volume Compensation (-1, 2)........................: -7.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.18
Term 14 Hydrophobicity of Tail [26..end]...................: -4.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -85.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3780 (length 60 amino acids):
MPTRFKKCRH QRGSTFCGYG RVGKHRKHES GRGNAGGMHH HRINFDKYHP GYFGKLGMDH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -73.50 (PValue = 6.975376e-01)
Components of the Score Function:
Profile Score...............................................: -13.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2990 (length 60 amino acids):
MADAFFCCFS CLPRCHAHHC IHTQTHTHTR IMAVSCEFIL SAFLVIITGL LFIDLVPLQE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -13.48 (PValue = 1.068564e-02)
Components of the Score Function:
Profile Score...............................................: -6.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.87
Term 4 Volume Compensation (-1, 1, 2).....................: -1.30
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.15
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.02
Term 14 Hydrophobicity of Tail [26..end]...................: -0.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2930 (length 60 amino acids):
MPISANSLVR WSLAAVGVSG AALGGTYVYK TYFHQHPARN EKIVQLAAIA LSGEVVDKSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -43.82 (PValue = 1.685162e-01)
Components of the Score Function:
Profile Score...............................................: -23.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.66
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2920 (length 60 amino acids):
MAALLLASRQ HVFLYMDESM SAEEMLATAA EMQQVRESLL SFSNPLGVDA ERARQTAGSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -70.67 (PValue = 6.466549e-01)
Components of the Score Function:
Profile Score...............................................: -12.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.82
Term 4 Volume Compensation (-1, 1, 2).....................: -1.23
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3440 (length 60 amino acids):
MYAQHIQSTP SNKFPVFQGV SPRVTAQTYQ SHRGEYVSII FELTGPGEFK CGVTGMSVKV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -45.77 (PValue = 1.927942e-01)
Components of the Score Function:
Profile Score...............................................: -5.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3240 (length 60 amino acids):
MEKWRTAKAQ KQAEVEQLNG KLRRLCAAVE DEKSAAEAKI RESQGEHEAA LRAARQSVEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -55.86 (PValue = 3.544593e-01)
Components of the Score Function:
Profile Score...............................................: -9.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.97
Term 14 Hydrophobicity of Tail [26..end]...................: -2.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3030 (length 60 amino acids):
MSHSSAREQG AGEKEEIRRI NRELQRNLIL ETALIGFALG VLALAGVLFT AYGWHTHNDN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -57.23 (PValue = 3.803104e-01)
Components of the Score Function:
Profile Score...............................................: -9.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.24
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.91
Term 14 Hydrophobicity of Tail [26..end]...................: -4.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2890 (length 60 amino acids):
MGEQRSVARM SKSAYRHPLA PKDPSQRNVT IPIRASRAAA SASSSSASAA LSAEDLKKQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -58.09 (PValue = 3.969206e-01)
Components of the Score Function:
Profile Score...............................................: -3.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2870 (length 60 amino acids):
MSAVLVDTRG HEYRLEMAVD PERGSYGALF AQATTYRAQR LFRPCMEDIP GLVEDNASEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -89.51 (PValue = 8.973893e-01)
Components of the Score Function:
Profile Score...............................................: -24.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -2.35
Term 5 Volume Compensation (-1, 2)........................: -0.52
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.58
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.10
Term 14 Hydrophobicity of Tail [26..end]...................: -2.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2810 (length 60 amino acids):
MHSVENGKPG DPHVVVNGSE NRQQGGARKK KRKATPLPMN QLIPMTFVLL NESICSTMLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -51.85 (PValue = 2.834611e-01)
Components of the Score Function:
Profile Score...............................................: -7.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.28
Term 4 Volume Compensation (-1, 1, 2).....................: -4.75
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.56
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2770 (length 60 amino acids):
MTGTAAEAAI YMDRHLGEKV RLTLEKCLQD KPCDPIKFFA HSLRQLAEQD ASNNQKPVRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -92.25 (PValue = 9.169906e-01)
Components of the Score Function:
Profile Score...............................................: -22.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.28
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.84
Term 14 Hydrophobicity of Tail [26..end]...................: -4.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2750 (length 60 amino acids):
MLDVEQEQPH CSPNASGARS LHHQHGCCTP IHAQSASING DANHDLPAPQ QPVSNGGTAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.03 (PValue = 4.351055e-01)
Components of the Score Function:
Profile Score...............................................: -13.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2740 (length 60 amino acids):
MPAESYPDER LDSMLATLTP IFCEKFKVEN AADVEWRVFT FAPGRVNLIG EHVDYMEGWT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -65.86 (PValue = 5.529279e-01)
Components of the Score Function:
Profile Score...............................................: -19.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2640 (length 60 amino acids):
MTKDRLHYRL SRKHAHGAEE VERSIGITCS RYAPAARTAD ARRPVALMKW AFDDYIMEEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -92.87 (PValue = 9.209404e-01)
Components of the Score Function:
Profile Score...............................................: -11.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.90
Term 14 Hydrophobicity of Tail [26..end]...................: -4.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -28.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -69.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2390 (length 60 amino acids):
MQTSQSLHTA PAEKEVEAPP QLPLTDGRCY ACRRCRRILS EVQWYATGCV ECSATMGVPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -74.63 (PValue = 7.167403e-01)
Components of the Score Function:
Profile Score...............................................: -18.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.20
Term 4 Volume Compensation (-1, 1, 2).....................: -2.89
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2120 (length 60 amino acids):
MKLYGLLILK PHPPGIEKDP VICCSAVNVS SFGFFQRSSA REFIVFLSRT VAKRVVLGAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -34.50 (PValue = 8.269261e-02)
Components of the Score Function:
Profile Score...............................................: -6.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2075 (length 60 amino acids):
MLGLTSVMQR IRFCLRAYVY GDRSSALCLS HARFSSRRYH LFLLRNVPSP LLRPSSSPIT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -48.73 (PValue = 2.341389e-01)
Components of the Score Function:
Profile Score...............................................: -10.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.28
Term 4 Volume Compensation (-1, 1, 2).....................: -1.71
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0370 (length 60 amino acids):
MAKETAKRNR KKNSVRMRVF SMMTAAVNLL YVLAILYRNG SLPSFHDLMA IGFWAGQEYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -53.30 (PValue = 3.081266e-01)
Components of the Score Function:
Profile Score...............................................: -6.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.91
Term 5 Volume Compensation (-1, 2)........................: -1.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0315 (length 60 amino acids):
MLFRCIRVVR PPALHTRRMS MRTVVMEHGV PLSLYYFITN ELLVCLLTCL LHYGYFGQED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -56.05 (PValue = 3.579640e-01)
Components of the Score Function:
Profile Score...............................................: -16.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.87
Term 14 Hydrophobicity of Tail [26..end]...................: -3.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0270 (length 60 amino acids):
MPFTEVYGVE QFRDIANDPT LTVVCFSAVW CGPCKTIEKD LDRLTYEFAS VRFAKVDADN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -71.03 (PValue = 6.533259e-01)
Components of the Score Function:
Profile Score...............................................: -18.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.87
Term 5 Volume Compensation (-1, 2)........................: -4.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.07
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0260 (length 60 amino acids):
MPQSAARLNR MQIREQEALN RQRRMQDDAV ARREEEELRR TKAQYDHVSS HGYGRAGSGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -66.05 (PValue = 5.567393e-01)
Components of the Score Function:
Profile Score...............................................: 3.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.78
Term 4 Volume Compensation (-1, 1, 2).....................: -1.07
Term 5 Volume Compensation (-1, 2)........................: -1.67
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0180 (length 60 amino acids):
MHSSLPMAEQ TARAGGGGGG GAGNGADESI TNLVVNVSEA DWATIDCIRS HTEAAERAAM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -65.34 (PValue = 5.424659e-01)
Components of the Score Function:
Profile Score...............................................: -14.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.39
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.91
Term 14 Hydrophobicity of Tail [26..end]...................: -2.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0160 (length 60 amino acids):
MSVVLESLLH RSVCCHLAHG EEYRGQLEAL DGTFDVVLSQ CTRSRAAPKQ PAEPLVFLRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -26.85 (PValue = 4.244454e-02)
Components of the Score Function:
Profile Score...............................................: -0.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.40
Term 4 Volume Compensation (-1, 1, 2).....................: -4.42
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0150 (length 60 amino acids):
MVLPGVSHYE RMPTRTKIQF FWISMLTMGF AYQFLKMTVL RVQPKREEQM YMHIRKVYGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -102.11 (PValue = 9.633723e-01)
Components of the Score Function:
Profile Score...............................................: -37.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.91
Term 4 Volume Compensation (-1, 1, 2).....................: -2.38
Term 5 Volume Compensation (-1, 2)........................: -2.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.51
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0100 (length 60 amino acids):
MGNQLFLVAN LLATAHRTGI PAYLEAVPFS SSAEDPRPTY WDTLFRDLGH YGVQMCASSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -46.37 (PValue = 2.007926e-01)
Components of the Score Function:
Profile Score...............................................: -1.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3710 (length 60 amino acids):
MYVLSTSRPS TAAFGAAVGN FCGDETTYVA LNRGTLLSLY VCRQSNSGID HVQDFRLHCT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 24 had the best score.
Total Score.................................................: -58.24 (PValue = 3.998809e-01)
Components of the Score Function:
Profile Score...............................................: -2.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.50
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3700 (length 60 amino acids):
MNSNWLGAGA NGSFYYPDRS KQDEASYEVS MGDGYTTEMV TDPNAPATEQ TQAENETAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -72.59 (PValue = 6.816080e-01)
Components of the Score Function:
Profile Score...............................................: -13.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.13
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3570 (length 60 amino acids):
MTFSVKGGSY SSSHPSPAMH PYVSPSLLPQ SHGQQAPPSF SLGDEQYVGV PKRVGVDPTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.00 (PValue = 5.354834e-01)
Components of the Score Function:
Profile Score...............................................: -11.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.94
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3550 (length 60 amino acids):
MAAFSRLLGV QLPYVMEVVI FLALAYATAY VLTNIMFASI HKFKMAGPLT AIPVLGGVVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -24.46 (PValue = 3.393275e-02)
Components of the Score Function:
Profile Score...............................................: -13.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.26
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3445 (length 60 amino acids):
MTVAPPHAIR PFLSLSSPAQ PQTHTRTGDA ISGSFRDAAV SLALMGTYLS LRVRKRPRKD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -60.77 (PValue = 4.499808e-01)
Components of the Score Function:
Profile Score...............................................: -0.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -4.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3380 (length 60 amino acids):
MYQDSKILMI FKSLRDIVVI GDNDMVITDM NAAAVAFFGW KVDDVKGKSI TFLVPTHPLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -36.21 (PValue = 9.504726e-02)
Components of the Score Function:
Profile Score...............................................: -6.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.97
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3360 (length 60 amino acids):
MSLSKRPDDV MDGTGDREVA TILRSLAPEE VDMLRDTFIY MDRDSDGFVS REEMMAKVAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.86 (PValue = 4.719831e-01)
Components of the Score Function:
Profile Score...............................................: -7.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3340 (length 60 amino acids):
MVKVKSLCTL QIPEGVTVDV KGRKVTVTGK RGTLTKDLTH LQLDLRVDKK NRTFTVIRWF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -75.23 (PValue = 7.266870e-01)
Components of the Score Function:
Profile Score...............................................: -23.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.51
Term 4 Volume Compensation (-1, 1, 2).....................: -3.09
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.77
Term 14 Hydrophobicity of Tail [26..end]...................: -1.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3320 (length 60 amino acids):
METLKGFARR TTQSLREMVS RTEVSPEEMR LTEVMTKVRI LETKGEMICE KVIQAARLMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -62.92 (PValue = 4.934436e-01)
Components of the Score Function:
Profile Score...............................................: -20.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.32
Term 4 Volume Compensation (-1, 1, 2).....................: -2.13
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3190 (length 60 amino acids):
MRRSLLLACS AAKGESWASM SDTEIMKQVE NKKIAFHGLE QALAPDYDRA IAIRREIVKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -71.10 (PValue = 6.545077e-01)
Components of the Score Function:
Profile Score...............................................: -6.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.65
Term 4 Volume Compensation (-1, 1, 2).....................: -4.65
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3150 (length 60 amino acids):
MAALKVLLLL CLATLVATTC FAQVAQEAEI NPHPLLFVSK TTSNDDIVLG SSVEVVVTVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -30.12 (PValue = 5.699800e-02)
Components of the Score Function:
Profile Score...............................................: -10.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.45
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.93
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.78
Term 14 Hydrophobicity of Tail [26..end]...................: -0.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0650 (length 60 amino acids):
MSVSSVPRED SQGPQRVSVS PLATPNMSPA ATQPPQQQPV KAAAMMTSPI MNGVTTPRLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -28.58 (PValue = 4.969002e-02)
Components of the Score Function:
Profile Score...............................................: -1.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1820 (length 60 amino acids):
MPVYDIAARK RKNLLRRREE EAAHAEDDKD HSPDEDEEKE DFEDDEYVDS DEEVEEMEEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -69.17 (PValue = 6.180914e-01)
Components of the Score Function:
Profile Score...............................................: -5.75
Term 0 Contents and Windows of DE in Region [-11..1]......: -0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.70
Term 14 Hydrophobicity of Tail [26..end]...................: -3.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1750 (length 60 amino acids):
MDLFSNCRVT GHRSSFHSTR KAMSEIAEMF QRISQRPNVT GIIVVDSEGT PIRSTIEDTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -67.76 (PValue = 5.907576e-01)
Components of the Score Function:
Profile Score...............................................: -29.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.75
Term 4 Volume Compensation (-1, 1, 2).....................: -4.86
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.28
Term 14 Hydrophobicity of Tail [26..end]...................: -3.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1640 (length 60 amino acids):
MRSRIVRDPG VPPTLVARPE DVFEDNGSGN SSMCAHALNG FAVGERYDTA KSNAAATLPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -51.13 (PValue = 2.715808e-01)
Components of the Score Function:
Profile Score...............................................: -1.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.74
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1610 (length 60 amino acids):
MFRCEEATFY VGVALLCGVV AVFAVSRAFL YALGVLVSHV VRSGCFPPSV ERSVCAAALI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -24.62 (PValue = 3.445690e-02)
Components of the Score Function:
Profile Score...............................................: -5.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.39
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -2.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1600 (length 60 amino acids):
MQHPSYGVSL SDALVRAIRA ASKPFFQIQA SRYAQEANSK SDLGLVSLVM KTKALVPQEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -57.67 (PValue = 3.887792e-01)
Components of the Score Function:
Profile Score...............................................: -19.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1590 (length 60 amino acids):
MRSKPRHSSR LALHPIRVAC AIAFIVVFLA FGYHMGVRNT ERGFQSRLVE LRTLESELKV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -62.38 (PValue = 4.824663e-01)
Components of the Score Function:
Profile Score...............................................: -7.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.85
Term 4 Volume Compensation (-1, 1, 2).....................: -6.25
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.70
Term 9 Volume Limitation [3..8]...........................: -1.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1510 (length 60 amino acids):
MRRERFEIDQ YVRVRVTDTR YSIGVVTDID EDQDRATVET RNGYEVTVPT SALRRAFLLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -42.31 (PValue = 1.513580e-01)
Components of the Score Function:
Profile Score...............................................: -11.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.58
Term 4 Volume Compensation (-1, 1, 2).....................: -2.38
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.55
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1380 (length 60 amino acids):
MSVSFSTLVQ RARPASNHAT SAAFREVLSK IPPTNVSTLG NGVRVACEEN PLSKLATVGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -13.16 (PValue = 1.029196e-02)
Components of the Score Function:
Profile Score...............................................: -0.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.67
Term 14 Hydrophobicity of Tail [26..end]...................: -0.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1360 (length 60 amino acids):
MQNSIYVGTD TCMDCGFTRG SSVCCPVTRR HHGTDELITS GRHRTSHSRF SSASKGIFAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -54.21 (PValue = 3.243087e-01)
Components of the Score Function:
Profile Score...............................................: -7.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1150 (length 60 amino acids):
MPSQTRSLIY SSCFAVAMAI ALPIAYDMRV RSIGVYGYLF HSSDPWFNYR AAEYMSTHGW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -68.76 (PValue = 6.101864e-01)
Components of the Score Function:
Profile Score...............................................: -11.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -0.86
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.84
Term 14 Hydrophobicity of Tail [26..end]...................: -3.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1360 (length 60 amino acids):
MACRACATSV VVCDVGTSTT RLGYAGNAEP TFALPTVCAW RDRMSAETFA VGDAAATMVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.38 (PValue = 5.432223e-01)
Components of the Score Function:
Profile Score...............................................: -12.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1320 (length 60 amino acids):
MEHSGRGVLS PARRCSSVPR NLEGSRSSPS SFYAFPSTLN DILFGPRQRL TKYADGMQAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -54.98 (PValue = 3.383005e-01)
Components of the Score Function:
Profile Score...............................................: -5.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.85
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1280 (length 60 amino acids):
MEIDSLTIQL TSLLALHRDD DANEDDIVFA TLDYIRGAHA VAQMLLLEGR FPELQRCLNL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -55.73 (PValue = 3.520777e-01)
Components of the Score Function:
Profile Score...............................................: -17.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.89
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1210 (length 60 amino acids):
MHPGLPRAFP DTEWQTVADI FRRRAPVSFL APNSSASATA DPAAAAEAWV QQEIGYYEAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -58.67 (PValue = 4.082289e-01)
Components of the Score Function:
Profile Score...............................................: -10.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1200 (length 60 amino acids):
MDPAGRRLSG AQQQQQQPAD RAKADADRDT VDMLPPLRTE ASPFEQASAS TNKSSAASAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -61.53 (PValue = 4.652155e-01)
Components of the Score Function:
Profile Score...............................................: -0.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1150 (length 60 amino acids):
MTVFWLEQWW KRKDHRKIRG ARGARFASLR FHGAFILSVL VLVEYVFRST DNFTARHFAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -43.79 (PValue = 1.682478e-01)
Components of the Score Function:
Profile Score...............................................: -13.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.26
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.83
Term 14 Hydrophobicity of Tail [26..end]...................: -3.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0980 (length 60 amino acids):
MCVCVCVCVS LSERVEHAPT KQRSCLPAEK FDHNGLSTST FTHNARAAAE TPAKLAKSRD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -66.65 (PValue = 5.687536e-01)
Components of the Score Function:
Profile Score...............................................: -17.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.06
Term 14 Hydrophobicity of Tail [26..end]...................: -1.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0530 (length 60 amino acids):
MDGSPTDVMD GAENLAAVTA AESAANVRDK SADHGQGCDD AVVEPIPAKS FSSRPSSTPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -56.44 (PValue = 3.653265e-01)
Components of the Score Function:
Profile Score...............................................: -8.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -3.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0410 (length 60 amino acids):
MWRRSCCVLA PSIPRSVWDP AHYNENWVDS YSTSIADRRH WPAKKWSIGL EPRTPRDWLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -78.97 (PValue = 7.836349e-01)
Components of the Score Function:
Profile Score...............................................: -15.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.80
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.42
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0330 (length 60 amino acids):
MLPYAIRQIV WMLTSALQLI YALSTGVVWV MQMLRLFVYG ACVGVCFIPH WWWYLTSPNI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -47.87 (PValue = 2.216895e-01)
Components of the Score Function:
Profile Score...............................................: -4.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0260 (length 60 amino acids):
METYKDVIVS HPPAMYSQSG YTTHFALENY KGILLCQRPS NLGSAAGFGG AGGVDGYNQG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -48.77 (PValue = 2.347684e-01)
Components of the Score Function:
Profile Score...............................................: 0.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0240 (length 60 amino acids):
MQRIRLVGVG RTAIGALKRS SIDLAREAME RAFAEANIAA KDVGALIATP SLSSGHFMQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -66.63 (PValue = 5.683420e-01)
Components of the Score Function:
Profile Score...............................................: -4.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.45
Term 4 Volume Compensation (-1, 1, 2).....................: -2.08
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.93
Term 14 Hydrophobicity of Tail [26..end]...................: -2.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0223 (length 60 amino acids):
MLEKAGLPFR KSLYSVFEEE NGLTDVPMLF SIEVEGVTAL KTATHSTDLQ VPVAPTTNSI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -59.37 (PValue = 4.221484e-01)
Components of the Score Function:
Profile Score...............................................: -23.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0170 (length 60 amino acids):
MKMPVKRKSS SSHDNGSKHG NGNKGIIVKM KKQAEDDDFE KFLSELSKTT RHIGAERTER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -78.26 (PValue = 7.734926e-01)
Components of the Score Function:
Profile Score...............................................: -16.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.16
Term 4 Volume Compensation (-1, 1, 2).....................: -4.11
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.60
Term 14 Hydrophobicity of Tail [26..end]...................: -2.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0160 (length 60 amino acids):
MTKNRRHDIV KPSKYKTSMC TFFRSEEGCP FGEKCAFAHG EDELRPEPKD TAPLPEAATG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -63.21 (PValue = 4.993153e-01)
Components of the Score Function:
Profile Score...............................................: -10.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0130 (length 60 amino acids):
MWLELGLCKA LIRAVSHLGY ISPTPVQAEA IPAALRGVDV CARAVTGSGK TAAFLLPLAH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -7.66 (PValue = 5.180999e-03)
Components of the Score Function:
Profile Score...............................................: -1.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -1.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.06
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0020 (length 60 amino acids):
MPHLVKLLRS SKWALRQRYR SVKAAAVEEL RWMRHKLVSL CGSENDVLRF KRFLFSILFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -14.94 (PValue = 1.262786e-02)
Components of the Score Function:
Profile Score...............................................: -8.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -2.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1570 (length 60 amino acids):
MVGEQIVTHI PHSIVHKKTF SMQPSISFID AVKDEVVQWR RHIHEYPYVA YEEQPTADYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -89.12 (PValue = 8.943338e-01)
Components of the Score Function:
Profile Score...............................................: -21.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.26
Term 14 Hydrophobicity of Tail [26..end]...................: -2.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1680 (length 60 amino acids):
MTSSQGALLR TLHDAITHTL RNADEVAAVV DAAVQLSSLR YRSLASSWDL PKLLSSALRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -29.43 (PValue = 5.360083e-02)
Components of the Score Function:
Profile Score...............................................: -6.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.31
Term 4 Volume Compensation (-1, 1, 2).....................: -3.02
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1650 (length 60 amino acids):
MHRPSRKHVN KSGHIRYSKK IGLGFKTPAK ALNGKYIDRK CPFTSNVVIR GRILRGVVHS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -42.96 (PValue = 1.586432e-01)
Components of the Score Function:
Profile Score...............................................: -20.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1440 (length 60 amino acids):
MSAEAESMPA PQVTAPATHT TPTAVELKPK NTHRLNRILR KPKASLPPRK WHPDEEGEPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -104.95 (PValue = 9.717292e-01)
Components of the Score Function:
Profile Score...............................................: -16.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.58
Term 4 Volume Compensation (-1, 1, 2).....................: -2.25
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.87
Term 14 Hydrophobicity of Tail [26..end]...................: -5.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -76.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1180 (length 60 amino acids):
MSQDQLNDEG RWTEIEEEAP QEQETPDAPD QAEDCNEAAP TEEQAEDCNE AAPTEEQAED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -88.82 (PValue = 8.919414e-01)
Components of the Score Function:
Profile Score...............................................: -8.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.17
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.14
Term 14 Hydrophobicity of Tail [26..end]...................: -4.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.61
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1070 (length 60 amino acids):
MNHYASGEET SSSQPSFSPS YLLTDAMPVR SRFMNPVDFL SSSEPLMLTP EEKAAEKAEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -70.30 (PValue = 6.396688e-01)
Components of the Score Function:
Profile Score...............................................: -14.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.35
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.31
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.89
Term 14 Hydrophobicity of Tail [26..end]...................: -3.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0960 (length 60 amino acids):
MKVGSSSQSP EGSAARAAAD SVMPVQSCSL SLVTGTSKSA PASTGVFVGD MDWPQGELVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -51.28 (PValue = 2.741026e-01)
Components of the Score Function:
Profile Score...............................................: -8.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.94
Term 14 Hydrophobicity of Tail [26..end]...................: -1.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0870 (length 60 amino acids):
MASLATWDDC IGPAKWLSEP LQRVLSYPKP LPVQQAVIPT IMRALMSGVP NDVSLTAPTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -56.77 (PValue = 3.715637e-01)
Components of the Score Function:
Profile Score...............................................: -15.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.60
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.94
Term 14 Hydrophobicity of Tail [26..end]...................: -0.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0850 (length 60 amino acids):
MNRSKWTLRR LILGLSVEDA QSKFDTPESR SILRVAHERY NQGIYHELHI AQRQRNGLAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -86.83 (PValue = 8.746436e-01)
Components of the Score Function:
Profile Score...............................................: -15.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0810 (length 60 amino acids):
MSRYYSVCSV PTDNDTKTNC IFLSTVDFAE VAGPQAAATG DSFVVLVQGF PFTVCRSDVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -30.92 (PValue = 6.109768e-02)
Components of the Score Function:
Profile Score...............................................: -10.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.36
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0960 (length 60 amino acids):
MSHNTLYITP RAVPYCILSI ANAFKDLTPK QRHYAHHMMA AGWCGAPVVA EQLSPESLPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -46.66 (PValue = 2.046998e-01)
Components of the Score Function:
Profile Score...............................................: -12.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.41
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -22.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0980 (length 60 amino acids):
MRQGWLRSSA ALLERVHGHL KDQDRIFTNL YNDFGTGIDA AERRGDWYRT KDILLKGHDW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -59.43 (PValue = 4.232156e-01)
Components of the Score Function:
Profile Score...............................................: -11.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -0.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0790 (length 60 amino acids):
MPPSVVLDPS STTTSADENA GLTSTDVYLV DSPYKRRRPT IAFVPYDKPA AGDHRHHSGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -100.38 (PValue = 9.573891e-01)
Components of the Score Function:
Profile Score...............................................: -12.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.93
Term 14 Hydrophobicity of Tail [26..end]...................: -5.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -71.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0650 (length 60 amino acids):
MSRTSSSAAT SASPLFREYR VHHVTTDGIL VQLPETRGFG RLTTATLGDD LLAKRLLTSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -36.41 (PValue = 9.652588e-02)
Components of the Score Function:
Profile Score...............................................: -6.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.43
Term 4 Volume Compensation (-1, 1, 2).....................: -3.14
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.41
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0640 (length 60 amino acids):
MYGQTGSGKT HTMFGEVNGG AWATSFDSGR PPAGVAFNAD TNEEDVNERP KAEGGPAHAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -74.27 (PValue = 7.108121e-01)
Components of the Score Function:
Profile Score...............................................: -20.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.89
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.15
Term 14 Hydrophobicity of Tail [26..end]...................: -2.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0520 (length 60 amino acids):
MPSVPNKILV GPTTYVHLRR KHRDYYVPDF LCGADGESKS PRLPDDSEHV WRYSVSKAHH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -70.19 (PValue = 6.374876e-01)
Components of the Score Function:
Profile Score...............................................: -17.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.68
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.28
Term 14 Hydrophobicity of Tail [26..end]...................: -2.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0450 (length 60 amino acids):
MQDEHKFNAE DRRRAPPPNT PERALDYHER TNDDKLIAHA SQVNHLSKPR HRNCLTEFII
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -62.52 (PValue = 4.852695e-01)
Components of the Score Function:
Profile Score...............................................: -16.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.85
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.32
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0430 (length 60 amino acids):
MSRHSRRLHV RLLRAAAVVA AGTLAYRRWR LRASSALPAS AYRSANGAEH YHDSPAPRSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -63.24 (PValue = 4.999702e-01)
Components of the Score Function:
Profile Score...............................................: 0.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.77
Term 14 Hydrophobicity of Tail [26..end]...................: -3.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0346 (length 60 amino acids):
MPAHEQFTDL DSDARALPST WRSLADIKKH VFSPGYVVEG ETGCRTGEAE SATPPLAAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -28.83 (PValue = 5.081342e-02)
Components of the Score Function:
Profile Score...............................................: 3.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0340 (length 60 amino acids):
MQFVFVVKGQ SSRVPQALPA DRLFIVASRE TAHRSRHVRA WGAKKYSAAV PASGAPLQIS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -39.98 (PValue = 1.273910e-01)
Components of the Score Function:
Profile Score...............................................: 5.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.32
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0300 (length 60 amino acids):
MDNMDLSSIS TSSSAPQLFH MSPTERAEVE TGTWAWWHQE LQNKRVTKDG YHRVQLQDVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -76.94 (PValue = 7.538447e-01)
Components of the Score Function:
Profile Score...............................................: -19.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.76
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.80
Term 14 Hydrophobicity of Tail [26..end]...................: -1.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0040 (length 60 amino acids):
MMLSAADIHA FVRDERAWKR AAQKPGGGDA LAAGMISSKE SNWLVFRRGT SDNAFSLKFS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -52.42 (PValue = 2.930155e-01)
Components of the Score Function:
Profile Score...............................................: -9.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0020 (length 60 amino acids):
MLFLARDGMR GHLVDVETQT VLRNYAIGEV ATNALAYSPI SQAVIAHQTR NCALFLSAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -27.54 (PValue = 4.524448e-02)
Components of the Score Function:
Profile Score...............................................: -9.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1225 (length 60 amino acids):
MRALRSSCPA FLCWQALPST TPLLREISRH DPPSTRNEQG SPDSSNTEQI QKASHLDSHR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -58.19 (PValue = 3.989125e-01)
Components of the Score Function:
Profile Score...............................................: -8.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.66
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.1200 (length 60 amino acids):
MQQVHPDIKK LNDLLRPILK ELQEMGDKKG KLIEARRQLG GQKNENELVR DELNRLEPDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -80.72 (PValue = 8.072924e-01)
Components of the Score Function:
Profile Score...............................................: -10.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.56
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.1040 (length 60 amino acids):
MLRRGIVLLQ YGAQGASYPI NSAPQEHPSG GSASSRMMMQ RSQKMLLDPA SFIERPPRNT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -65.06 (PValue = 5.368024e-01)
Components of the Score Function:
Profile Score...............................................: -4.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.42
Term 14 Hydrophobicity of Tail [26..end]...................: -3.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.1020 (length 60 amino acids):
MASSSATASR ADRLQAFLRS PDIPASFYTN NTRDDNLIAV TTQFDILYHK YFPDRKPLFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -83.66 (PValue = 8.425181e-01)
Components of the Score Function:
Profile Score...............................................: -34.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.26
Term 4 Volume Compensation (-1, 1, 2).....................: -4.58
Term 5 Volume Compensation (-1, 2)........................: -2.40
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.18
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0860 (length 60 amino acids):
MLRRSPVPRR YRTAWRELLH PLPVWARRQQ WLKRDTVEMN EAILREPYYR IKTFAQPAAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -56.83 (PValue = 3.727685e-01)
Components of the Score Function:
Profile Score...............................................: -7.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.79
Term 4 Volume Compensation (-1, 1, 2).....................: -1.23
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.04
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0800 (length 60 amino acids):
MPPPPPPPRP DPVTLDQIFV QLTAVDVAYD SKAYHLVALN TVAFHPSVKL FLFEEPAAAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -68.15 (PValue = 5.982461e-01)
Components of the Score Function:
Profile Score...............................................: -16.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0760 (length 60 amino acids):
MSELDLNDAN EGVDWACVDV DLRDLLRESM QLARANAAAP QADAVASTSV GDAGQDKSAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -65.40 (PValue = 5.435887e-01)
Components of the Score Function:
Profile Score...............................................: -3.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.59
Term 14 Hydrophobicity of Tail [26..end]...................: -2.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0710 (length 60 amino acids):
MDCVETCPPH HRRSSQLSHR PPTSAVGGSN GISGGVGASG SCNVRRACAA VSAARSTDRI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -47.15 (PValue = 2.114398e-01)
Components of the Score Function:
Profile Score...............................................: -3.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.75
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0370 (length 60 amino acids):
MPSDRVPSGD GFNNPYGNTT LVGNWLEDRL QQRIVHKRRG GAAATWCAQG IFEDPAVTMA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -45.45 (PValue = 1.887440e-01)
Components of the Score Function:
Profile Score...............................................: 1.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0250 (length 60 amino acids):
MPRAYYKPFT AYEEAFGFHA TRRNAYIMCS VLFGGLLLKC MLLMKYSPVA NPNRTSPLED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -83.85 (PValue = 8.446691e-01)
Components of the Score Function:
Profile Score...............................................: -19.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.57
Term 14 Hydrophobicity of Tail [26..end]...................: -2.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0220 (length 60 amino acids):
MAPSSTAIPE IAAAPGAPRG VGVPASPSRG SRMSKCKRFL QNLNGPAFDL KAVQEAQHTF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -56.49 (PValue = 3.661909e-01)
Components of the Score Function:
Profile Score...............................................: -7.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.56
Term 4 Volume Compensation (-1, 1, 2).....................: -2.08
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.84
Term 14 Hydrophobicity of Tail [26..end]...................: -2.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0210 (length 60 amino acids):
MYLRTPLVQR GVLRCHPPRC HRRAPAVTTS APLSSSGSTD GGSDFACYIE AEFTDTLFAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -44.07 (PValue = 1.715278e-01)
Components of the Score Function:
Profile Score...............................................: -2.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.56
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0200 (length 60 amino acids):
MSSSLGKALR RSKRATERKG RRNYRDALEN ERSAALEAEL HQQEIGRAKT QLKSIWETND
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -60.96 (PValue = 4.538215e-01)
Components of the Score Function:
Profile Score...............................................: -10.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.46
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.10
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0080 (length 60 amino acids):
MAGKFRGDVG KLSKPKKNKA AKRAKSKKVV SLVKRSPKLA QDTLQSRIAE LTSRESAARA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -78.72 (PValue = 7.801511e-01)
Components of the Score Function:
Profile Score...............................................: -21.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.10
Term 14 Hydrophobicity of Tail [26..end]...................: -2.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.05.0010 (length 60 amino acids):
MEKASLKHLE FQLQREKALA KDLEARCKSL SAQVAQLEQD KAELRREKLF LGEEAKKTSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -80.27 (PValue = 8.013563e-01)
Components of the Score Function:
Profile Score...............................................: -21.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.56
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.85
Term 14 Hydrophobicity of Tail [26..end]...................: -4.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4570 (length 60 amino acids):
MGSNFLGYSD EDHGLASVWG RLIFLSCITT GIFYVIFGLF ACRRLIVKDI RWLLMAFLYF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -43.01 (PValue = 1.591195e-01)
Components of the Score Function:
Profile Score...............................................: -13.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.26
Term 4 Volume Compensation (-1, 1, 2).....................: -4.42
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.61
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.36
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4560 (length 60 amino acids):
MQSKGVETGS YKPSLRVDIG SADNAKEEPA NVTEGSPHKV ITPHVSTNIF VAGIPSTWDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -48.39 (PValue = 2.292041e-01)
Components of the Score Function:
Profile Score...............................................: -11.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.67
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4490 (length 60 amino acids):
MASGASVIAI KYNGGVLMAA DTLLSYGSLA KWPNIPRIKL LGSHSAVCAT GSYADFQMMA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -67.19 (PValue = 5.793655e-01)
Components of the Score Function:
Profile Score...............................................: -10.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.57
Term 14 Hydrophobicity of Tail [26..end]...................: -2.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4400 (length 60 amino acids):
MASGASVIAI KYNGGVLMAA DTLLSYGSLA KWPNIPRIKL LGSHSAVCAT GSYADFQMMA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -67.19 (PValue = 5.793655e-01)
Components of the Score Function:
Profile Score...............................................: -10.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.57
Term 14 Hydrophobicity of Tail [26..end]...................: -2.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4360 (length 60 amino acids):
MKNVLLIGAR GALGRAVANA FANGKWSIIS VDQAAAVQQG DECCAVNPAS SIEELQQAYK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -61.36 (PValue = 4.617629e-01)
Components of the Score Function:
Profile Score...............................................: -14.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.98
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.04
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4000 (length 60 amino acids):
MEDVITRIAD TASYPLHVLQ RNKKTIGIVG ADALAALPMA GGSCTHRLVI SATELKPFLI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -23.50 (PValue = 3.091586e-02)
Components of the Score Function:
Profile Score...............................................: -6.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4040 (length 60 amino acids):
MESSVVDSFA AATVSLTAPQ RRDLMRHWLR SLAAAVKYLP RQEASLGVSG GVDADRFSTR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.77 (PValue = 6.484372e-01)
Components of the Score Function:
Profile Score...............................................: -9.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.74
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.40
Term 14 Hydrophobicity of Tail [26..end]...................: -3.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4310 (length 60 amino acids):
MLTKFEARSS RVKAVALHNS TTWVLCGLHN GAVQIWDYRM STCVDTYTEH VGAVRGADFH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -67.84 (PValue = 5.921598e-01)
Components of the Score Function:
Profile Score...............................................: -14.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.67
Term 14 Hydrophobicity of Tail [26..end]...................: -1.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4250 (length 60 amino acids):
MASKRLRSNV DVVGGINELL NLSVRSPSHG EERLDTQSFS GQPNWSLQVT ETDDMHSTPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -78.86 (PValue = 7.820898e-01)
Components of the Score Function:
Profile Score...............................................: -18.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.96
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.92
Term 14 Hydrophobicity of Tail [26..end]...................: -2.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4220 (length 60 amino acids):
MSKQVLQSLP LAKGKDIHSR MAKLALYKEC LALAYLVRNK LVREHTLREV REKWLEHRGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -110.11 (PValue = 9.830634e-01)
Components of the Score Function:
Profile Score...............................................: -26.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.06
Term 4 Volume Compensation (-1, 1, 2).....................: -2.12
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.90
Term 14 Hydrophobicity of Tail [26..end]...................: -2.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -67.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4160 (length 60 amino acids):
MSLSQATKDC VTAVRKAVKK HISGDVVSEQ KIGAVLQLQL RVTAASEAEV AQILLSAMVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -27.75 (PValue = 4.612447e-02)
Components of the Score Function:
Profile Score...............................................: -7.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.17
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.4120 (length 60 amino acids):
MDTRPPSKVI AVHDYLGSCA SVQQLLNESV ADLPLSRLTP TEPLEVYCAD LRGHNFSEAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -58.80 (PValue = 4.108437e-01)
Components of the Score Function:
Profile Score...............................................: -12.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.39
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.19
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.29
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3952 (length 60 amino acids):
THREPHPPPL RPPYPCWSLC SHSTAIVPHA VKDKHRIEAG EEVCVCNRRR VTLTLFPLEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -53.20 (PValue = 3.063779e-01)
Components of the Score Function:
Profile Score...............................................: -22.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.74
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3815 (length 60 amino acids):
MLRFFRARLA PTTTDAAAKL PAGNPVNKTW FRHNLIIRRK GSYRSRWGNG TEGYGAGVPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -30.62 (PValue = 5.954881e-02)
Components of the Score Function:
Profile Score...............................................: 6.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3800 (length 60 amino acids):
MRARRSCKFA EYLSTYAILE HIGIHPTTLI EKRDAAVGVG VYVRDACDAG TALLAVPSKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -45.92 (PValue = 1.947596e-01)
Components of the Score Function:
Profile Score...............................................: -9.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.58
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3780 (length 60 amino acids):
MSSLDAKVEQ WLAWDRDPAT RQIIESLAAK KDTAELRRRL ETRMKFNTAG LRSTMGAGSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -64.10 (PValue = 5.173742e-01)
Components of the Score Function:
Profile Score...............................................: -0.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.39
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -51.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3750 (length 60 amino acids):
MLRPFQGRAA ASTSTATRES TASRVATPQR RHQQMRNGEL IDKGSVSTEA EVGKPYWGTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -45.47 (PValue = 1.889046e-01)
Components of the Score Function:
Profile Score...............................................: -0.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.02
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3640 (length 60 amino acids):
MPSMSKLVPA TASEIAAIVS PASATTTTAA PVLVNLRLNI ITAVLILGVS LVLALVYTLW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -28.36 (PValue = 4.872550e-02)
Components of the Score Function:
Profile Score...............................................: -2.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.41
Term 9 Volume Limitation [3..8]...........................: -1.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3480 (length 60 amino acids):
MSTQEEPPQH TRLLLRRTLS TRSPLLLDEM RLPSMTPSPS IPYDVLLRRY IDVRDAARDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -51.69 (PValue = 2.807210e-01)
Components of the Score Function:
Profile Score...............................................: -12.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.20
Term 4 Volume Compensation (-1, 1, 2).....................: -1.61
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3420 (length 60 amino acids):
MSSLLSWTGP VAVAASVAYA YASNHPSAAQ LESGSAYQFP LTTLRYCGLL FLVYASGTMP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -27.32 (PValue = 4.431520e-02)
Components of the Score Function:
Profile Score...............................................: 1.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3370 (length 60 amino acids):
MALSSSGSAA LGDRIARAAA AAPQWTAQQR CFRQLLKSLR GAYFHDRSKL FWARHRILVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -61.57 (PValue = 4.661683e-01)
Components of the Score Function:
Profile Score...............................................: -7.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3330 (length 60 amino acids):
MTPTVSPVQA AAAIATVGFL AYATTRMLQA LYSAPPNIPE PAIPPNSEDG LVWSVIKRVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -42.45 (PValue = 1.528319e-01)
Components of the Score Function:
Profile Score...............................................: 0.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.13
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.56
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3120 (length 60 amino acids):
MNHTRAVMEA ILAVITYSFC SVSMILVNKL IMNTYDMNFP FGILVLQTGG ALVIVALAKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -32.48 (PValue = 6.987570e-02)
Components of the Score Function:
Profile Score...............................................: -21.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.99
Term 4 Volume Compensation (-1, 1, 2).....................: -0.50
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.35
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.02
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.3070 (length 60 amino acids):
MLPATDSIQM GVIQADAGAS AAVQQRDGSF SAQSDEADRH VNRVASFDNH GMSAVPLTDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -57.16 (PValue = 3.790054e-01)
Components of the Score Function:
Profile Score...............................................: -11.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.52
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -3.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2960 (length 60 amino acids):
MLTIIMEGLT QPLQISSNGA YSLGLLLALS TGPLPLISEH IIGAYLALQL LWWLLLCIRA
Best predicted site is shown in red.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
Potential GPI-modification site was found.
Quality of the site ............... : S
Sequence position of the omega-site : 30
Score of the best site ............ : -4.53 (PValue = 3.354180e-03)
Best Site
Total Score.................................................: -4.53
Components of the Score Function:
Profile Score...............................................: -1.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.87
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.02
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2930 (length 60 amino acids):
MFHRSFTSLF LKGVFKVNKP PVTGYEIAEL PNEKVLHDFM QFYRTKGVVV ILHSGASYAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -24.65 (PValue = 3.453774e-02)
Components of the Score Function:
Profile Score...............................................: -1.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -6.89
Term 4 Volume Compensation (-1, 1, 2).....................: -7.17
Term 5 Volume Compensation (-1, 2)........................: -3.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.80
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2910 (length 60 amino acids):
MSSMHSPAHD SYTSSSTGDD SHHCQRQQQE DDEERWDITI SFSCGGWFQM YFFGVAYALI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -23.15 (PValue = 2.987255e-02)
Components of the Score Function:
Profile Score...............................................: -0.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -6.95
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.19
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2840 (length 60 amino acids):
MLNVNIGLLG HVDSGKTALA KALSSTASTA AFDKSPQSQS RGITLDLGFS ACEVSVEDGN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -44.56 (PValue = 1.775689e-01)
Components of the Score Function:
Profile Score...............................................: -9.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2830 (length 60 amino acids):
MEMRHRQIKV ALSGGCELLF DKEVTITLAD VVPVGATVAQ LIDMLRRGYI KERPELFVDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -74.78 (PValue = 7.193548e-01)
Components of the Score Function:
Profile Score...............................................: -27.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.71
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2780 (length 60 amino acids):
MFFRRVTNPS CIMAALKNKI HRIGKRKGAT LKDVSAWRWI KTAARHFKQE GKIFVPNCTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -66.13 (PValue = 5.582519e-01)
Components of the Score Function:
Profile Score...............................................: -12.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.39
Term 14 Hydrophobicity of Tail [26..end]...................: -1.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2540 (length 60 amino acids):
MSRIAPGDSV KLLKVQLSEK EFRIGELENR VKDLFNEAKE LDEKLRIANR NARVLEEENS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -94.03 (PValue = 9.278421e-01)
Components of the Score Function:
Profile Score...............................................: -16.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.48
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2530 (length 60 amino acids):
MAHLPLEGSV VCYEFLDAEK KWLWGVGTVI RFDDRVCVIS QWVGAPVDKA MAAKLESEAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.53 (PValue = 5.462483e-01)
Components of the Score Function:
Profile Score...............................................: -11.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.16
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0960 (length 60 amino acids):
MLASSLPLLR RRGTGHVVKY LEGVPTPTKL IDHLAGADLH ASAELPFFTT VPRYVDVQRE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -63.34 (PValue = 5.018353e-01)
Components of the Score Function:
Profile Score...............................................: -14.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.96
Term 14 Hydrophobicity of Tail [26..end]...................: -2.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0850 (length 60 amino acids):
MVDIIVWAYV VGLFIFMSCK YIAYRLQGLH YFFLDYCYFH NSVLMCFLLW RLVDVQWSEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -58.68 (PValue = 4.085657e-01)
Components of the Score Function:
Profile Score...............................................: -14.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.07
Term 5 Volume Compensation (-1, 2)........................: -1.67
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -5.52
Term 9 Volume Limitation [3..8]...........................: -1.98
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.07
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0800 (length 60 amino acids):
MAYAYTDPTS INYILQRAHT ELRRGENQHY RSTEAQYTNH VKELLGNLER YLETCGVRLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -51.70 (PValue = 2.809514e-01)
Components of the Score Function:
Profile Score...............................................: -19.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.01
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.17
Term 14 Hydrophobicity of Tail [26..end]...................: -1.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0610 (length 60 amino acids):
MESSISEQHH VLACATTLHV TLLTSHYAEA SQRDDAAAAS SNNAAAGHRR EAPPSMKASS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -50.56 (PValue = 2.624118e-01)
Components of the Score Function:
Profile Score...............................................: 0.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.26
Term 14 Hydrophobicity of Tail [26..end]...................: -3.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0590 (length 60 amino acids):
MPHPAILSEH TIARGVHASC LPVSIPHQLP ALEVFGQAPV PHRVSTSCTL LRVHRRSAYE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -69.65 (PValue = 6.272384e-01)
Components of the Score Function:
Profile Score...............................................: -3.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.70
Term 14 Hydrophobicity of Tail [26..end]...................: -3.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0570 (length 60 amino acids):
MRSSQSGTLT TSPSPPKSPP HDFTPDILPP TPFRLEEAPV YRDDWARHHP FIHLLFHRDI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -74.35 (PValue = 7.120867e-01)
Components of the Score Function:
Profile Score...............................................: -19.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.83
Term 4 Volume Compensation (-1, 1, 2).....................: -2.65
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0560 (length 60 amino acids):
MESRDAHAKV SVDGGTDEAV PHDREDTVPP PAAPSARTNE REKDLQLRRL RRENHLLRLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -72.42 (PValue = 6.785404e-01)
Components of the Score Function:
Profile Score...............................................: -19.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.86
Term 4 Volume Compensation (-1, 1, 2).....................: -4.87
Term 5 Volume Compensation (-1, 2)........................: -2.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0550 (length 60 amino acids):
MTLQQFSAQG ARRTPKRQWQ PAVPKLIIVA VTVLASFVSG TTAANPCIMG GKPAALIEKV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -41.85 (PValue = 1.464003e-01)
Components of the Score Function:
Profile Score...............................................: -11.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0520 (length 60 amino acids):
MALLHSIIST PRQHRHTALI AVSLLAVVLV FWGAGAHAAD DDADVSACSG SSPYYTAVEH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -56.13 (PValue = 3.594603e-01)
Components of the Score Function:
Profile Score...............................................: -0.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.57
Term 14 Hydrophobicity of Tail [26..end]...................: -2.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0410 (length 60 amino acids):
MALGKNKRIS KGGKRGKRGK AQETMARKEW YDVVAPANFE KRQFAKTICN KTQGTRIAAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -81.30 (PValue = 8.146069e-01)
Components of the Score Function:
Profile Score...............................................: -21.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.19
Term 4 Volume Compensation (-1, 1, 2).....................: -4.45
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.80
Term 14 Hydrophobicity of Tail [26..end]...................: -1.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0320 (length 60 amino acids):
MSEAALKREI ALQEASDVVD NKSRVLPKSP ADTRERTHEV VAATEPFEHP ISLRSKVSAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -52.93 (PValue = 3.018654e-01)
Components of the Score Function:
Profile Score...............................................: -12.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.31
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.08
Term 14 Hydrophobicity of Tail [26..end]...................: -0.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0300 (length 60 amino acids):
MPATTMVADP LSQIVSQVID DVSFSQTHTV SDDFRVYPKL SIDSVSTLQQ EQRKRVEQTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -75.98 (PValue = 7.387806e-01)
Components of the Score Function:
Profile Score...............................................: -17.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.21
Term 14 Hydrophobicity of Tail [26..end]...................: -4.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0150 (length 60 amino acids):
MSSVLTGALA YGSSVFTIVA LYPYRDFVKS ADLRHLPCAK DLGDYCAKRY RGMLGSLSQP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.91 (PValue = 5.739346e-01)
Components of the Score Function:
Profile Score...............................................: -19.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -1.23
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1470 (length 60 amino acids):
MTGEISEKAF PLSTDRLSQT ILDLVQEASN AKMVKKGANE ATKALNRGIA DLIVLAGDTN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -21.40 (PValue = 2.513870e-02)
Components of the Score Function:
Profile Score...............................................: -7.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1410 (length 60 amino acids):
MVGRTSVVAY VVSSFLACSL FLADYANTYR EFYPAMVALA NSSSFRLLIV NTVIAFTVVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -15.20 (PValue = 1.300454e-02)
Components of the Score Function:
Profile Score...............................................: 6.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -6.60
Term 9 Volume Limitation [3..8]...........................: -3.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.06
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0500 (length 60 amino acids):
MHSDHLQGPS SLKALTTTRH SHHGTLEASE KATLCGAEVV RPTQTPSAKS RSRSRDLADE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -75.88 (PValue = 7.371598e-01)
Components of the Score Function:
Profile Score...............................................: -14.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.95
Term 14 Hydrophobicity of Tail [26..end]...................: -2.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0490 (length 60 amino acids):
MRTGTNANCE PLTEISSLRT SRRPSSLHRR KSKIGGRTVL YIPCRERVLI ALAATMQVIT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -20.94 (PValue = 2.398979e-02)
Components of the Score Function:
Profile Score...............................................: -4.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.15
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.07
Term 14 Hydrophobicity of Tail [26..end]...................: -0.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0470 (length 60 amino acids):
MACRSHKVTC VEQAVWCETL LRHSQHTAPL VLANINAAAY TKPMAEGNDP LDVQGVAIPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -44.36 (PValue = 1.750084e-01)
Components of the Score Function:
Profile Score...............................................: -4.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -23.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0450 (length 60 amino acids):
MADERFDSML LAIAQQQQGI DGILDTFFSF LNRKTDFFTQ PDMARRSVQQ AMSRYLAEAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -60.98 (PValue = 4.542549e-01)
Components of the Score Function:
Profile Score...............................................: -14.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.47
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0015 (length 60 amino acids):
TWPRASAPLM PRAARGARRR CCDNIRGITR GGVKRISSEV YEEVRRVLKA YVEDIVRCST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -57.39 (PValue = 3.834484e-01)
Components of the Score Function:
Profile Score...............................................: -17.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -1.99
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1490 (length 60 amino acids):
MQANSPTARP AGSQGRHRCA IAVKNNVQYL FVVMPKPKPP PEVELEPLMF FDALPPTTPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -63.93 (PValue = 5.138614e-01)
Components of the Score Function:
Profile Score...............................................: -18.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.09
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.02
Term 14 Hydrophobicity of Tail [26..end]...................: -1.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1320 (length 60 amino acids):
MASLIPTLTE QDPELANMIE LEMGRQFRGL EMIASENLTS KAVLECLGSA LTNKYAEGEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -58.63 (PValue = 4.075617e-01)
Components of the Score Function:
Profile Score...............................................: -19.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.35
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.50
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.66
Term 14 Hydrophobicity of Tail [26..end]...................: -3.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1290 (length 60 amino acids):
MSSLIRCTDD LLHQKAVQSS HYERLERQLL DGERCRRAAV LALRQRVADV KRRSKDVVDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -58.68 (PValue = 4.085392e-01)
Components of the Score Function:
Profile Score...............................................: -9.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -1.14
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.24
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1110 (length 60 amino acids):
MDTVGGTVRL LSSSSTALSS IHDVRGSVRS SLASSHPSNG AVFQFDHVFW SVETPDACGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -50.45 (PValue = 2.607245e-01)
Components of the Score Function:
Profile Score...............................................: -3.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1100 (length 60 amino acids):
MHPSTVRREA ERVKVSVRVR PINERENNAP KGAKVTIAAK QAAAVVTVKA LGVSNNSGAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.00 (PValue = 2.234624e-01)
Components of the Score Function:
Profile Score...............................................: -5.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.75
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1080 (length 60 amino acids):
MQRRVCGEWR WVTLSPDLLP LLLMVVMLFI FPRSDASGSC LRGRDTHGPR LSHDAHRTGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -60.47 (PValue = 4.439704e-01)
Components of the Score Function:
Profile Score...............................................: -10.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.57
Term 14 Hydrophobicity of Tail [26..end]...................: -4.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.1000 (length 60 amino acids):
MSAAAADYPL RRGGDVEDDV DDEERRRLTE SSIKAFLEEE GVPVRSSVTV EDITSALVAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -31.73 (PValue = 6.556082e-02)
Components of the Score Function:
Profile Score...............................................: -0.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.62
Term 4 Volume Compensation (-1, 1, 2).....................: -2.14
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0930 (length 60 amino acids):
MASVSNLTTA PAATGKSVLK TMVAIFKEEA DIPRVLGESE AFIAYTLKNR RAIRLICRAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -65.15 (PValue = 5.385958e-01)
Components of the Score Function:
Profile Score...............................................: -29.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.23
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0830 (length 60 amino acids):
MSYQQLQGAA SSSSGGSGAG GRQLSAQQRH AQQSALAASS LLPPPLRSDG RAAAAAATGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -47.00 (PValue = 2.093197e-01)
Components of the Score Function:
Profile Score...............................................: -4.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.17
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0800 (length 60 amino acids):
MDLDAFLSKN NKKSSKKVAK KSADEAALGG FGLETVPRVS TAAAKPITVA NTGGSDASAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -57.74 (PValue = 3.901020e-01)
Components of the Score Function:
Profile Score...............................................: -3.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0790 (length 60 amino acids):
MMQKRGDNII ANATPFLART TTSGAQSAVS SSPSPSVAVG TSSSADRKKQ CASSAPHTLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -37.33 (PValue = 1.038413e-01)
Components of the Score Function:
Profile Score...............................................: 4.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.67
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0610 (length 60 amino acids):
MRGLQLSGHA WRPCLSSAAV SLRTFSSCTT STSGAAVVVT ASRRNGAVLS AVYITQRLYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -44.89 (PValue = 1.815802e-01)
Components of the Score Function:
Profile Score...............................................: -13.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.36
Term 14 Hydrophobicity of Tail [26..end]...................: -1.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0380 (length 60 amino acids):
MSHPTARGAG EKAPLVRGNF SETHGDPYVE ELGPGALVYT ASLIRDDRTS RTSGTISTVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -57.47 (PValue = 3.849163e-01)
Components of the Score Function:
Profile Score...............................................: -11.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.09
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0350 (length 60 amino acids):
MLILLITGSA SKELKAQVRA VLVDEAQLFS ASEASEVESS SVFVLCIDAE DSAVMEPLYQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -32.05 (PValue = 6.734529e-02)
Components of the Score Function:
Profile Score...............................................: -11.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.14.0120 (length 60 amino acids):
MTSSMSVPPP PPAAIPLPSS ATAVPLPPSC VVPPPPPAAA VPLPPAEATP PPPSAPSVPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -50.89 (PValue = 2.677612e-01)
Components of the Score Function:
Profile Score...............................................: -4.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.35
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.29
Term 14 Hydrophobicity of Tail [26..end]...................: -2.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1650 (length 60 amino acids):
MIHDTLKVCV FVGFLGSGKT TILQRLLPTL PREEKVRIIV NDISRDNIDV HAFQPSGATN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -74.32 (PValue = 7.115172e-01)
Components of the Score Function:
Profile Score...............................................: -21.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.91
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1550 (length 60 amino acids):
MSVSASSSRA AAASSGTLDA TVAPHTADAV EETFKLLVWR LVLVDTAEDS SQWSSRAKQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -60.30 (PValue = 4.406529e-01)
Components of the Score Function:
Profile Score...............................................: -10.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.86
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.88
Term 14 Hydrophobicity of Tail [26..end]...................: -4.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1540 (length 60 amino acids):
MSFTEWPVSR VRQEFVDYFK KQGHTFVPSS PVCPHDDPTL LFINAGMNQF KALFLGTADP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -34.60 (PValue = 8.340756e-02)
Components of the Score Function:
Profile Score...............................................: 0.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.13
Term 5 Volume Compensation (-1, 2)........................: -0.19
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1460 (length 60 amino acids):
MLISTRDAFE KRHITRSDGV EVLPREMITV AALEAGYCLA SPTVGEAVGK TTYPGQMTAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -62.30 (PValue = 4.808509e-01)
Components of the Score Function:
Profile Score...............................................: -9.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.47
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.64
Term 14 Hydrophobicity of Tail [26..end]...................: -2.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1390 (length 60 amino acids):
MPLTEMSATE VPRVCSRLAS FQSSAKPARV FTIATATTTA ESSGAASSPQ EEAEQHLSVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -45.65 (PValue = 1.913258e-01)
Components of the Score Function:
Profile Score...............................................: -7.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1340 (length 60 amino acids):
MVHPAEGGVE VGSTGAGAAA AVFCGGRSGA PSVVSSQNDI TSEARLDQIV AVLEERRVER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -55.03 (PValue = 3.390501e-01)
Components of the Score Function:
Profile Score...............................................: -5.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1220 (length 60 amino acids):
MLRQTAARLN TYLTRSVATP PISVIRTGPK WWAEPERMVK HKVMYFTMGI DQLPLRRTAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -67.68 (PValue = 5.891021e-01)
Components of the Score Function:
Profile Score...............................................: -22.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -0.97
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1200 (length 60 amino acids):
MPKTDTDVSA HHHYGTHQPP TGGSTPASHV AASLPKLLPA QPELPHQHST ETASTRYHEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -104.64 (PValue = 9.709056e-01)
Components of the Score Function:
Profile Score...............................................: -17.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.45
Term 4 Volume Compensation (-1, 1, 2).....................: -1.92
Term 5 Volume Compensation (-1, 2)........................: -1.74
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.33
Term 14 Hydrophobicity of Tail [26..end]...................: -4.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -70.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.1100 (length 60 amino acids):
MEFDALLNTL CLTSFVLFGL WIVAHAVQVV ELHFMMQAYT HHKTYIFTIP FVPLITRLFH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -38.67 (PValue = 1.153442e-01)
Components of the Score Function:
Profile Score...............................................: -22.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.24
Term 4 Volume Compensation (-1, 1, 2).....................: -3.10
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0960 (length 60 amino acids):
MYKAVMSGFN ACLFAYGQTG SGKSYSMIGP TDALSGVTGA SASSSGNPSR SPPPAQRDSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -46.60 (PValue = 2.039638e-01)
Components of the Score Function:
Profile Score...............................................: 1.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.38
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0880 (length 60 amino acids):
MSTSRKRYRP LDSAEERAVT VHERLQLLPL ENEQSYCFSW PEAPLTQWLQ DDVPYASLYQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -61.59 (PValue = 4.664491e-01)
Components of the Score Function:
Profile Score...............................................: -10.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -2.23
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0760 (length 60 amino acids):
MLQATLTARL FSKPIGQGYV ALLPKPQPGP TGRAWMRAMD ANSDVRDFYT ADTERYNTWY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -86.43 (PValue = 8.709361e-01)
Components of the Score Function:
Profile Score...............................................: -21.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.95
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.06
Term 14 Hydrophobicity of Tail [26..end]...................: -4.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0570 (length 60 amino acids):
MSNEKGACQT KNTVRVKDDD KEEKEIIPLD KDDIALLNLY GSGPYHASIK ELEEFVKSHV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -39.75 (PValue = 1.251714e-01)
Components of the Score Function:
Profile Score...............................................: -6.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0560 (length 60 amino acids):
MISTQTASSI EVAVRVRPIR GEIRESRTAW HVDATSLTEI AQPDCAFTFD RVYDIAATTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -55.63 (PValue = 3.501856e-01)
Components of the Score Function:
Profile Score...............................................: -6.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.59
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0540 (length 60 amino acids):
MSSIQVSGRH GSYATQFWKP SVWAVAASRF RNRADMRAAY SRKAIDRRLV LPLDSHNWIR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -54.70 (PValue = 3.331018e-01)
Components of the Score Function:
Profile Score...............................................: -25.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0500 (length 60 amino acids):
MEEEDSILGL VPASLPVHAD SEGSVVASGY MGCVSGSPVA AGADTDDGSG WTFEHVLRAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -46.68 (PValue = 2.049526e-01)
Components of the Score Function:
Profile Score...............................................: -2.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.22.0210 (length 60 amino acids):
MPPPHAARRG RSHSGGVNVS ERQPNRSASP RNGGNHSSRP RIPAAHAHGE RNASGASRGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -65.22 (PValue = 5.399837e-01)
Components of the Score Function:
Profile Score...............................................: -7.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1560 (length 60 amino acids):
MSCVLEFFIP NHVADLEDVT KIGSDCYHVE AVCEFDVPER QQLDDLTRLF DALHHEKSPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -99.40 (PValue = 9.536399e-01)
Components of the Score Function:
Profile Score...............................................: -17.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.34
Term 9 Volume Limitation [3..8]...........................: -1.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.81
Term 14 Hydrophobicity of Tail [26..end]...................: -2.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -66.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1120 (length 60 amino acids):
MLYSPDNADE RFCYSDATAG GGGVEREFLR VAASYVASPH EGPRSAYYDF FAAHNATLWT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -54.71 (PValue = 3.332343e-01)
Components of the Score Function:
Profile Score...............................................: -10.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0225 (length 60 amino acids):
MRQGAARGCA CVAAHSGGLC GCIASANTTT AVRGYTRGIP YTPQGTIQDY TSSPRHVRLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -66.65 (PValue = 5.687186e-01)
Components of the Score Function:
Profile Score...............................................: -12.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.01
Term 4 Volume Compensation (-1, 1, 2).....................: -3.93
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1035 (length 60 amino acids):
MSADAHHAVR RLYVQLLHAQ HGAHDVMEEE EPGPLPSGST SVPTNRSPLS TTTFLERNGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -54.49 (PValue = 3.292729e-01)
Components of the Score Function:
Profile Score...............................................: 0.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.13
Term 14 Hydrophobicity of Tail [26..end]...................: -1.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1025 (length 60 amino acids):
MPRPAAHTSA KGRQNLRQHY YATSEQEAGL AHLWHMQRLA AVRLSPSHTI QDAPDVDFQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -65.58 (PValue = 5.472830e-01)
Components of the Score Function:
Profile Score...............................................: -14.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.85
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0210 (length 60 amino acids):
MLQETIDEEL SMEMTEALPC APPPGRSRHQ SDPLYDYRSE HLALQARLAE IWGPEAPYTP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -64.55 (PValue = 5.263511e-01)
Components of the Score Function:
Profile Score...............................................: -14.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.09
Term 14 Hydrophobicity of Tail [26..end]...................: -3.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2515 (length 60 amino acids):
MHTIVRFYHI LLSLFASHLY FPALPSSPLR ASVGVCVSVK PEWLQPPLQL ATALCLLPFP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -18.87 (PValue = 1.937425e-02)
Components of the Score Function:
Profile Score...............................................: -5.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.21
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0990 (length 60 amino acids):
MLNTKSPSPA NSNYDFALRH ERVKLIARAL KQFGVYITRT TQAMREVASC LSLVGQSYHE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -59.88 (PValue = 4.322718e-01)
Components of the Score Function:
Profile Score...............................................: -18.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.37
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0810 (length 60 amino acids):
MGLTPVERAA YYAARSPRFA KVTLKHLSYL HSVLERPCST SKRKGKMLTD TEAIAPFNVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.83 (PValue = 3.539419e-01)
Components of the Score Function:
Profile Score...............................................: -9.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.27
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0760 (length 60 amino acids):
MLRRVSLSAL VQRVAAGAVI ATAGRTIVVF SQQHHILESN QRARNSPSNV WIEDWEADRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -68.71 (PValue = 6.092749e-01)
Components of the Score Function:
Profile Score...............................................: -7.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0550 (length 60 amino acids):
MLSEEEQKRQ LYSRQEYVVG SETQAKYGST HVLVVGATGL SAEIIKNVVL TGVKSVKVLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -36.46 (PValue = 9.696537e-02)
Components of the Score Function:
Profile Score...............................................: -4.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.09
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1665 (length 60 amino acids):
MFLSCINYYV DKNCNFSVVS AVLLVNVYVL QYLPGTVVVP FLTLCACITA GVSKGLKRII
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -49.35 (PValue = 2.435696e-01)
Components of the Score Function:
Profile Score...............................................: -11.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.94
Term 4 Volume Compensation (-1, 1, 2).....................: -4.39
Term 5 Volume Compensation (-1, 2)........................: -3.65
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.14
Term 9 Volume Limitation [3..8]...........................: -1.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1640 (length 60 amino acids):
MNDTSFLSGL SSIGEAIGET AYGRCISLFV ISCEPSLDEL AVRLGGPGCP WETVQLPMRQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -71.52 (PValue = 6.622517e-01)
Components of the Score Function:
Profile Score...............................................: -7.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0547 (length 60 amino acids):
MPLYSIAICP LKLTAYFCRQ GSVYVVVISR KGLEIATSPS VCHANNEVIF SDAEGLSSAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -48.66 (PValue = 2.331177e-01)
Components of the Score Function:
Profile Score...............................................: -4.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0530 (length 60 amino acids):
MRATLVYRQG TSRQWMQRQS QDPFVTKARQ DGYVARSAYK LTHIDDRFHL FDRQHTRIAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -78.04 (PValue = 7.702801e-01)
Components of the Score Function:
Profile Score...............................................: -16.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.40
Term 4 Volume Compensation (-1, 1, 2).....................: -4.37
Term 5 Volume Compensation (-1, 2)........................: -5.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0410 (length 60 amino acids):
MPLSKKSSSL RQAIPCSVLF AADPLQVPSN ACVGNRLSTV RRQHQFSASR HTKHAPSVAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -63.13 (PValue = 4.977242e-01)
Components of the Score Function:
Profile Score...............................................: -2.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.72
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0390 (length 60 amino acids):
MSRQPNEDTF GAALANEFQW RNLYLKEFGC CTYPPPIPKD PSTTAVGVYP MRRQVKLLQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -55.21 (PValue = 3.424571e-01)
Components of the Score Function:
Profile Score...............................................: -8.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0380 (length 60 amino acids):
MMAPQRKEAR NAVPRSHHAS SLSAATTLIA VFLLLVACAS VTQALHVSPA SAEAAMWSGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 23 had the best score.
Total Score.................................................: -54.63 (PValue = 3.318611e-01)
Components of the Score Function:
Profile Score...............................................: 1.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.31
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0340 (length 60 amino acids):
MPPKQDNVQK LLAAEEKRNN LISDAKARKQ QKVKQAKADA EREVASFRAD KDREYDRYRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -105.92 (PValue = 9.742113e-01)
Components of the Score Function:
Profile Score...............................................: -16.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.43
Term 4 Volume Compensation (-1, 1, 2).....................: -4.45
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.38
Term 14 Hydrophobicity of Tail [26..end]...................: -4.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -73.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0320 (length 60 amino acids):
MSGVLSTPLT PSYRSSAAPY REAHFGHASG ALRPHRAPLN RGIRRTAECP CAVRLYHMTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -59.25 (PValue = 4.196248e-01)
Components of the Score Function:
Profile Score...............................................: -11.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.56
Term 4 Volume Compensation (-1, 1, 2).....................: -1.96
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0190 (length 60 amino acids):
MNSADALEPI PRSIAPDQEL SILKLILDLR SLGDVEGSKK VRRRVREALL KSSDDSEAMS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -78.06 (PValue = 7.705075e-01)
Components of the Score Function:
Profile Score...............................................: -20.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: -2.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0110 (length 60 amino acids):
MSSSDGQGMR AVILVGGFGT RLRPLTLTTP KPLVPFCNKP MIIHQIEALK AVGVTEVILA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -53.20 (PValue = 3.064818e-01)
Components of the Score Function:
Profile Score...............................................: -12.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -1.90
Term 5 Volume Compensation (-1, 2)........................: -3.25
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.17
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0050 (length 60 amino acids):
MSRTSVPPKV GQRPGIGVEK TTNPKVFFDI SIDNKAAGRI VMELYADTVP KTAENFRALC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.52 (PValue = 3.482164e-01)
Components of the Score Function:
Profile Score...............................................: -9.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.37
Term 9 Volume Limitation [3..8]...........................: -2.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2476 (length 60 amino acids):
MLRESASSSQ GGDGGGGRLM GETAFSRSAL LPAWVPPEAS TLHQRSASLT PQLNSKACSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -52.27 (PValue = 2.905470e-01)
Components of the Score Function:
Profile Score...............................................: -8.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2473 (length 60 amino acids):
MGFRTRSCMV FCYLNGVCAV FISYLFKIGI DSMAITSVIN KWDRQEKARA CRNAGILYLI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -51.62 (PValue = 2.796997e-01)
Components of the Score Function:
Profile Score...............................................: -19.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.62
Term 4 Volume Compensation (-1, 1, 2).....................: -1.56
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2320 (length 60 amino acids):
MAVLDYLFYA GVLLLAHALY MACSIREQLQ ASHHSHGHIP AISFGGHNVS ITAMMVPITL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -34.09 (PValue = 7.993396e-02)
Components of the Score Function:
Profile Score...............................................: -4.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -2.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2240 (length 60 amino acids):
MNPLLARDYE VPKKPIFLLE GRDVVQSTEA SAFVSNSVTD SVMYSTNGNL GLRHLSEVER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -43.19 (PValue = 1.611982e-01)
Components of the Score Function:
Profile Score...............................................: -9.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.28
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.15
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2230 (length 60 amino acids):
MVAVATLLRW FSFFSLATLQ KPFLPVVKDV IVYVCMSGAL LFLVTVVLAY GLADKEMQQY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -69.93 (PValue = 6.327209e-01)
Components of the Score Function:
Profile Score...............................................: -21.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.21
Term 4 Volume Compensation (-1, 1, 2).....................: -1.14
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.21
Term 9 Volume Limitation [3..8]...........................: -1.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.07
Term 14 Hydrophobicity of Tail [26..end]...................: -4.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2110 (length 60 amino acids):
MAAGAPSRVS RGLSLFERLQ QRRVQLHTSA NIKKKVREAF LSAVVAYEQL LAAATKALEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -48.25 (PValue = 2.270555e-01)
Components of the Score Function:
Profile Score...............................................: -10.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.20
Term 14 Hydrophobicity of Tail [26..end]...................: -0.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.2090 (length 60 amino acids):
MPPKLKPLPA KKFTLPPELA EKSDELTVGN IRVGPSGVEF TGEGDLQVRR PDLNFENLKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.49 (PValue = 3.475501e-01)
Components of the Score Function:
Profile Score...............................................: -10.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0025 (length 60 amino acids):
MDDVKVTFAF VTSSSIKCCA AAQCNDESTV DVSETLSGAP QHELRAAIIK VLDYDAGCSR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -36.74 (PValue = 9.911436e-02)
Components of the Score Function:
Profile Score...............................................: -12.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.76
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.63
Term 14 Hydrophobicity of Tail [26..end]...................: -3.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.0020 (length 60 amino acids):
MCKEFVASAE GTGLIASLYV VDYMRKQDNV AAKSTFYDVL IELEHAIRRD VFIVEQIKYT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -57.04 (PValue = 3.766527e-01)
Components of the Score Function:
Profile Score...............................................: -15.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1220 (length 60 amino acids):
MAENGRNAVP EGTMPTVLGN GDAEYPDPRT SRQGNFAAVN SSVLNSSEGN AISSFLLIGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -12.06 (PValue = 9.033704e-03)
Components of the Score Function:
Profile Score...............................................: 1.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.1030 (length 60 amino acids):
MSGTHNGELR APSRQSCCHR SWPVVFLIMS IIVVVLAFIC VILGFLHSAI TVNVGFLGVY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -48.95 (PValue = 2.375329e-01)
Components of the Score Function:
Profile Score...............................................: -19.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.39
Term 4 Volume Compensation (-1, 1, 2).....................: -2.06
Term 5 Volume Compensation (-1, 2)........................: -3.26
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -10.76
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0890 (length 60 amino acids):
MGNAASSPRR APSASSSSSP ARAFSTTPAT EPRPTKMLVN AAPRASASNF RSPAAITAAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -36.95 (PValue = 1.008239e-01)
Components of the Score Function:
Profile Score...............................................: 4.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0870 (length 60 amino acids):
MTADRVRSGS ASRALNGMGL PASSTVAAAP QPQQGSLAAM SVLPRTGSSS QQQMRLEATS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -56.89 (PValue = 3.738509e-01)
Components of the Score Function:
Profile Score...............................................: 2.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.11
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0440 (length 60 amino acids):
MAEHAAIADM VPTSRGDGRH LHCLHPQRYQ LLQLASSSIT GCETSHSAAP KTAGVEGGRI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -42.37 (PValue = 1.519499e-01)
Components of the Score Function:
Profile Score...............................................: -2.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0380 (length 60 amino acids):
MRRALHAAAL PSRAPLTPQR YKSYVLKFLR GQLPHDLKDC AGALGCLYGT LPDVDEYRQF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -72.81 (PValue = 6.855627e-01)
Components of the Score Function:
Profile Score...............................................: -10.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.83
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.04
Term 14 Hydrophobicity of Tail [26..end]...................: -3.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0370 (length 60 amino acids):
MTVRRMFCFL LPPPSHHRLS RSSLAHAHLP HIRMSAHFAQ CRSTHVHTYT HTHVHTHDTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -67.40 (PValue = 5.836423e-01)
Components of the Score Function:
Profile Score...............................................: -10.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.25
Term 4 Volume Compensation (-1, 1, 2).....................: -4.22
Term 5 Volume Compensation (-1, 2)........................: -4.72
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0240 (length 60 amino acids):
MQQQPRPVVA QYAYIELLPL RYTGPAPPPA PACMDPTPDE QYRRGVAEKR AALKQKEARR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -88.25 (PValue = 8.872209e-01)
Components of the Score Function:
Profile Score...............................................: -15.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.86
Term 14 Hydrophobicity of Tail [26..end]...................: -2.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0220 (length 60 amino acids):
MTPHAAVLTV ATVVAVLLGY GTKGVCGYNF VAITSLFYVP GATGTRSEDA GMCLERGGYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -48.58 (PValue = 2.319962e-01)
Components of the Score Function:
Profile Score...............................................: 2.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0150 (length 60 amino acids):
MGPFAPRCCA LALLCSVLVL AAVLVRAESF TVTRDVTMSS TSFDDYTMVL DLSSSSADVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -41.27 (PValue = 1.402775e-01)
Components of the Score Function:
Profile Score...............................................: -0.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.15
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0123 (length 60 amino acids):
MPDFSQFIKY LNANLHAPTG QYAAQGGVGG KGAGGASGAT EAASPASHGD TSAFIRSCDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -47.46 (PValue = 2.158521e-01)
Components of the Score Function:
Profile Score...............................................: -1.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.93
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0080 (length 60 amino acids):
MRRCLTPAGA WVSTWRRVTT VSRAVGYNPS HCPPLTETDA NKTTSATSTA APVAPTSEDY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -65.76 (PValue = 5.509454e-01)
Components of the Score Function:
Profile Score...............................................: -2.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.31
Term 14 Hydrophobicity of Tail [26..end]...................: -2.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0045 (length 60 amino acids):
MAQWIPKTAW KVSNLNKRYG APYVAKGYAS LDPRCSLDAY SSFQQTVTSA DMKKALLSID
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.90 (PValue = 2.842144e-01)
Components of the Score Function:
Profile Score...............................................: -12.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.96
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0040 (length 60 amino acids):
MQQRMGAMPM AVLYPQSYLP HSAVPCPAPG YGNMFSGYGA APVMMMVAGN APYPVNAHFG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -55.60 (PValue = 3.496201e-01)
Components of the Score Function:
Profile Score...............................................: -8.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.86
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0020 (length 60 amino acids):
MSRNISVAVY GVIMTAGVIA LTVLNIMGTT YQLLYGCVSI SVILCATGFL CIPMTIMKAN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -22.80 (PValue = 2.888875e-02)
Components of the Score Function:
Profile Score...............................................: -4.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.18
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1225 (length 60 amino acids):
MHCSGVDTLP MIWMGTSVFA VSGRSNATPS TTPPPTSAAM HRSDIPNRMG DCHWHRQKWP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -99.24 (PValue = 9.530342e-01)
Components of the Score Function:
Profile Score...............................................: -6.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -5.38
Term 4 Volume Compensation (-1, 1, 2).....................: -4.85
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -19.02
Term 14 Hydrophobicity of Tail [26..end]...................: -6.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -81.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1220 (length 60 amino acids):
MAVASKGRIA DVNQEELTKI GPKIDDVLSI CLASFDSLRD MAFKFQYEQA AEKAAYQSGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -74.16 (PValue = 7.089193e-01)
Components of the Score Function:
Profile Score...............................................: -16.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.31
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.73
Term 14 Hydrophobicity of Tail [26..end]...................: -2.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1210 (length 60 amino acids):
MRGSTSANAF SDASVQSAVL EEWKKRSAKH KEAASSLREK VRQLRSDVEA GRRAAQWMQE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -67.69 (PValue = 5.892009e-01)
Components of the Score Function:
Profile Score...............................................: -13.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1050 (length 60 amino acids):
MGGKEAVACV VYECVSVSVA LQRVDMLRHC PLHRCLPIGV ACRVLGFQTP PTSKHDLRKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -92.53 (PValue = 9.187994e-01)
Components of the Score Function:
Profile Score...............................................: -8.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.00
Term 4 Volume Compensation (-1, 1, 2).....................: -3.00
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -68.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1020 (length 60 amino acids):
MLTESSLMEA DNAIYEPSVA HGSTSVHAPR HHHTHTHQAH QQHSSASHPH SSPLGFLTHD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -36.98 (PValue = 1.010510e-01)
Components of the Score Function:
Profile Score...............................................: 6.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0980 (length 60 amino acids):
MSGHGPNCSA ITNGVEHRYA HVKWFHAVNS QASLLEAAQA IDQLFYDEHE GGARGSEAKI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -61.88 (PValue = 4.722806e-01)
Components of the Score Function:
Profile Score...............................................: -12.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.07
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0920 (length 60 amino acids):
MACASVCDAI LTFLRKFFSL ILALAMAFFT MLYVIGAGVV TTQAKSFSKS GFAHFLGIVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -24.35 (PValue = 3.355051e-02)
Components of the Score Function:
Profile Score...............................................: -12.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.17
Term 4 Volume Compensation (-1, 1, 2).....................: -1.70
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0890 (length 60 amino acids):
MQKQMNAVDQ AFMASLDAKS DVHQLASGMR FKILKKMADT ASTKSPNLSD PCSVHYHGSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.10 (PValue = 3.403685e-01)
Components of the Score Function:
Profile Score...............................................: -12.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.12
Term 5 Volume Compensation (-1, 2)........................: -0.17
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.07
Term 14 Hydrophobicity of Tail [26..end]...................: -1.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0750 (length 60 amino acids):
MNRAFLSDLA WRISLHPSCR AELRRHWPAP HYHKTPHDIE EAEEQPRCQA TGASPPVAAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -50.65 (PValue = 2.637942e-01)
Components of the Score Function:
Profile Score...............................................: -17.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.77
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0670 (length 60 amino acids):
MALAAAWTPQ RQFHFPSVNL RTSPVSCGAT PTRTFLRRAR LSAPSLLSQN AIQYRWIRAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -57.56 (PValue = 3.866797e-01)
Components of the Score Function:
Profile Score...............................................: -1.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.75
Term 14 Hydrophobicity of Tail [26..end]...................: -3.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0630 (length 60 amino acids):
MSQCAAVTTR RSPVLRARGP SPHPLVATAL VALCIWLQHT APAAAQSDSD YYDGTYYYHV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -64.48 (PValue = 5.250714e-01)
Components of the Score Function:
Profile Score...............................................: -8.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.69
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0580 (length 60 amino acids):
MLIFWTLSLG IVFSFYLCPF PVYLCCVRLY WTLHRRVVAR MDTIAELLKN IDPSRIDEAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -69.55 (PValue = 6.254948e-01)
Components of the Score Function:
Profile Score...............................................: -17.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -4.13
Term 5 Volume Compensation (-1, 2)........................: -3.25
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.56
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0560 (length 60 amino acids):
MSGQAGKQVA PVKCKGWAVE KPALKWSTDA VRLSDVTVPA PDPTQIRVRV YAASINPVDW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -59.80 (PValue = 4.305109e-01)
Components of the Score Function:
Profile Score...............................................: -20.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.28
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0370 (length 60 amino acids):
MMIDRYGISV PRYQRLSSLS SMGWSIKAFT AMLCDGFAFL GYTKRWYMFI SCVGGGAFAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -65.29 (PValue = 5.414627e-01)
Components of the Score Function:
Profile Score...............................................: -12.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.39
Term 4 Volume Compensation (-1, 1, 2).....................: -1.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.54
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0280 (length 60 amino acids):
MLGNRPPRGW AASPTAIIAS SSDGATVNVG KAYALSLHVE KTAAGSPLPL PAITSLGSGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -34.72 (PValue = 8.423049e-02)
Components of the Score Function:
Profile Score...............................................: 3.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.57
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.17
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1570 (length 60 amino acids):
MSGLELIALV PIGIAGWKLL QKLGDQQSLI AQHELTINSQ KEMLQSIVNA DRAGPLSRLN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.78 (PValue = 3.529742e-01)
Components of the Score Function:
Profile Score...............................................: -9.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -2.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1470 (length 60 amino acids):
MGCLRGCAAL IQHAPVKLPC DAPSGVSAPL HRRYPWYAVR HACTTAAAAG GNAVSGGGGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.94 (PValue = 4.533059e-01)
Components of the Score Function:
Profile Score...............................................: -5.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.57
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1400 (length 60 amino acids):
MSCPRVQYRR RMHYATRGNR MKMVRTPGNK LVMQKRAKRS QGIHTPWVLG HKRLGGTKAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -56.10 (PValue = 3.589191e-01)
Components of the Score Function:
Profile Score...............................................: -10.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.41
Term 5 Volume Compensation (-1, 2)........................: -1.67
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1350 (length 60 amino acids):
MFSPVYEDVS GLFGHPMPIS GFGPSTELQF PQTSYMTTTT NAPQTPTQQQ QQQLAGRATV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.24 (PValue = 4.392954e-01)
Components of the Score Function:
Profile Score...............................................: -11.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1330 (length 60 amino acids):
MPHLLEHSFL FTTEERQLIY HANSDVNTRP VGFVTRIFYP IWICISKHLL SDLVAPNAIT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -42.42 (PValue = 1.525971e-01)
Components of the Score Function:
Profile Score...............................................: -15.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.66
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1300 (length 60 amino acids):
MSPQTASAPK APAPPLPLWQ TLGVSGFAGM FGWCFTHPFE MWKNTVMMAA PGTSQLDSLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -69.54 (PValue = 6.252185e-01)
Components of the Score Function:
Profile Score...............................................: -10.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1290 (length 60 amino acids):
MSPQTASAPK APAPPLPLWQ TLGVSGFAGM FGWCFTHPFE MWKNTVMMAA PGTSQLDSLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -69.54 (PValue = 6.252185e-01)
Components of the Score Function:
Profile Score...............................................: -10.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1140 (length 60 amino acids):
MPPVVPGGLR SASPTSTVDY IDIEHKQNEL RHAVEHHVQS LERSLALREE EVATLSSRLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -56.18 (PValue = 3.604180e-01)
Components of the Score Function:
Profile Score...............................................: -15.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0890 (length 60 amino acids):
MSMKRQLLKI IILGDSGVGK TSLMHQYVNR IFDNRYKATI GADFLSKDVE VNGCVVTLQI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -31.33 (PValue = 6.331583e-02)
Components of the Score Function:
Profile Score...............................................: -8.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.21
Term 4 Volume Compensation (-1, 1, 2).....................: -3.05
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0850 (length 60 amino acids):
MRRTDLPSAP QSTGSGTAVV QSDDTVAAVF PDDPATAAAP VTPAAAAAAA DMPVVSPSSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -44.97 (PValue = 1.825573e-01)
Components of the Score Function:
Profile Score...............................................: 2.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0790 (length 60 amino acids):
MSSIEELKVV RLFRALNTMI QLCHDRGYVI RHPSAIAEAV QNPELYNNEE GLDHDWFLRH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -82.90 (PValue = 8.339618e-01)
Components of the Score Function:
Profile Score...............................................: -16.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.13
Term 4 Volume Compensation (-1, 1, 2).....................: -1.55
Term 5 Volume Compensation (-1, 2)........................: -0.63
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.32
Term 14 Hydrophobicity of Tail [26..end]...................: -3.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0750 (length 60 amino acids):
MSAPHLLSFL HPAASCSPPP IAVLTWMLAM EERLGRQAVH IAELEARHDI TALLARSYFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -52.82 (PValue = 2.999589e-01)
Components of the Score Function:
Profile Score...............................................: -14.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -3.04
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.76
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0730 (length 60 amino acids):
MADHSSENST AAGTLNSDLD ATRPGADAAT LGGSSGADET SKNVTTSGQD VSEDQQGSTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -72.22 (PValue = 6.749735e-01)
Components of the Score Function:
Profile Score...............................................: -4.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0640 (length 60 amino acids):
MDPSVMVGQY TLGKQIGSGN FSKVRLGTDP QGRTWAIKIV DKRRLKKENM EDQMLREVAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -64.50 (PValue = 5.253649e-01)
Components of the Score Function:
Profile Score...............................................: -12.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.70
Term 4 Volume Compensation (-1, 1, 2).....................: -3.10
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0550 (length 60 amino acids):
MCLRGILVDH QLFCPHEQVQ QPEDGDVEYA SVSFEVQYAT IRRENSERRF VFKGNKLTGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -59.40 (PValue = 4.227098e-01)
Components of the Score Function:
Profile Score...............................................: -10.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.67
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0500 (length 60 amino acids):
MPPLTLEQVL ARSMRLPRQR AQQQVSRLYK RHESGELGGS PGWPPSTETG SSPVNSGAPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -59.65 (PValue = 4.275851e-01)
Components of the Score Function:
Profile Score...............................................: -2.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.29
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0480 (length 60 amino acids):
MAKGKVILPP ATDIFNAFNS CPFRDLKVVL LGQDPYHDLH QAHGLCFSVL PEVPLPPSLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -48.46 (PValue = 2.301787e-01)
Components of the Score Function:
Profile Score...............................................: -11.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.76
Term 9 Volume Limitation [3..8]...........................: -0.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0460 (length 60 amino acids):
MSIVKVMITH SASQRVVPEK AYGLAQTVQS IREDMYSRFG IPAEQIRLEL YDTRDCKVEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -92.66 (PValue = 9.196219e-01)
Components of the Score Function:
Profile Score...............................................: -32.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.93
Term 14 Hydrophobicity of Tail [26..end]...................: -3.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5670 (length 60 amino acids):
MAGSSPDLPV TEAWASIVRM IRKNQAVIVV GETGSGKTTQ IPQYVWDDIL SKRPGAGIVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -60.53 (PValue = 4.451228e-01)
Components of the Score Function:
Profile Score...............................................: -8.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5510 (length 60 amino acids):
MSLKATDIIL GDRAPRSFLE LNREDPRVMR NSRENEESLP FVSLPCVHAT RTHPTCTSKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -72.40 (PValue = 6.781377e-01)
Components of the Score Function:
Profile Score...............................................: -6.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -5.18
Term 4 Volume Compensation (-1, 1, 2).....................: -4.64
Term 5 Volume Compensation (-1, 2)........................: -7.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -4.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5450 (length 60 amino acids):
MLVSSPLPSA AARTVVALLF VMLGLAHGAN GWSGADAYTI VLLKGFDTDR ALQDQFYNAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -57.18 (PValue = 3.793256e-01)
Components of the Score Function:
Profile Score...............................................: -17.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.13
Term 14 Hydrophobicity of Tail [26..end]...................: -3.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5400 (length 60 amino acids):
MWHAIKNTFV TTLEVRSSAQ EFAMIVDWMG RQPRGQRIRN LGLKPITVQD EQKTVWCDTP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -92.50 (PValue = 9.185715e-01)
Components of the Score Function:
Profile Score...............................................: -36.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.65
Term 4 Volume Compensation (-1, 1, 2).....................: -0.33
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.79
Term 14 Hydrophobicity of Tail [26..end]...................: -3.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5365 (length 60 amino acids):
MQTTLTGFIG TAQKRVALPI KGETEGTKSR MKRWRDGEYA DSYPIGSRTT KTLASQLRHL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -40.78 (PValue = 1.352362e-01)
Components of the Score Function:
Profile Score...............................................: 1.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5070 (length 60 amino acids):
MSFNLEKLNR GLTRLASVRQ YPIAKKQYVA KQTKGRVFRV GVLHKKELTE TALLRNRRGF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -98.09 (PValue = 9.482452e-01)
Components of the Score Function:
Profile Score...............................................: -18.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.24
Term 4 Volume Compensation (-1, 1, 2).....................: -2.82
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -63.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5020 (length 60 amino acids):
MSSPVKPATS ASDNLFKSLE RDFEEAMRAL EGEESLGHFR FEYDKLYRAL KKSHASENEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -89.73 (PValue = 8.991185e-01)
Components of the Score Function:
Profile Score...............................................: -18.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.32
Term 14 Hydrophobicity of Tail [26..end]...................: -2.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4980 (length 60 amino acids):
METMATTVSP SALCLPGGLQ TLSASCYRHN PYAFTLLQEK DRERAAESFS YIYSVLTDEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -64.77 (PValue = 5.309542e-01)
Components of the Score Function:
Profile Score...............................................: -13.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.04
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4800 (length 60 amino acids):
MPPLAPRRRR RTSELKFCHT KRRRVSEALV ERGIGKEFDR TLPFWRCFID LRLITGRVPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -44.19 (PValue = 1.730470e-01)
Components of the Score Function:
Profile Score...............................................: -20.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.13
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4710 (length 60 amino acids):
MELDHLKEDV LMGDTNEVTV PAAIVASAPV LDMGFHPRLP IMAAGLVTGE VEIYKRKSVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -79.82 (PValue = 7.952905e-01)
Components of the Score Function:
Profile Score...............................................: -7.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.65
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.60
Term 14 Hydrophobicity of Tail [26..end]...................: -2.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4570 (length 60 amino acids):
MTASRVPPFS AGLQFTRKDV HEPSADTAVD NRSGVSDGEP QATGRTPVRE EARCFESEEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -98.65 (PValue = 9.506004e-01)
Components of the Score Function:
Profile Score...............................................: -18.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.10
Term 14 Hydrophobicity of Tail [26..end]...................: -5.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -64.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4550 (length 60 amino acids):
MEKGSLETPS SVNGSFSVVD HDLEKPLHTR CKTNSKATAS VARPPRDCAD SVRVSRQHKY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -84.21 (PValue = 8.485133e-01)
Components of the Score Function:
Profile Score...............................................: -6.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.23
Term 14 Hydrophobicity of Tail [26..end]...................: -4.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -65.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4260 (length 60 amino acids):
MNSTTTISAD PDGSSLCAAS RISTPGTMSV LVPYKRRGQK SSMARGGASP QRRSPQPPYA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -64.47 (PValue = 5.247920e-01)
Components of the Score Function:
Profile Score...............................................: -6.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.41
Term 14 Hydrophobicity of Tail [26..end]...................: -3.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4010 (length 60 amino acids):
MDSLPNQLMS RITEISLSDA QIQSYGRWLA AAMGAYYVVN AWQKDTPADV QAAITGHMVQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -70.81 (PValue = 6.491065e-01)
Components of the Score Function:
Profile Score...............................................: -11.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.98
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3740 (length 60 amino acids):
MSCPRVQYRR RMHYATRGNR MKMVRTPGNK LVMQKRAKRS QGIHTPWVLG HKRLGGTKAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -56.10 (PValue = 3.589191e-01)
Components of the Score Function:
Profile Score...............................................: -10.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.41
Term 5 Volume Compensation (-1, 2)........................: -1.67
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3400 (length 60 amino acids):
MAKSKNHTNH NQSSKNHRNG IKGPVPLHLH NSKRGSWLPA LVNARRVRKH NQKAALKKRR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -99.20 (PValue = 9.528740e-01)
Components of the Score Function:
Profile Score...............................................: -19.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.59
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -67.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3330 (length 60 amino acids):
MSTYANSQAR LNRVAPQLRP AGVHGDWTEA TMAELLSSYN PNGIITPDHI RSFHHRGCDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -85.10 (PValue = 8.578206e-01)
Components of the Score Function:
Profile Score...............................................: -10.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.57
Term 4 Volume Compensation (-1, 1, 2).....................: -2.23
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.61
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.34
Term 14 Hydrophobicity of Tail [26..end]...................: -3.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3290 (length 60 amino acids):
MVSYLEGQVT RDGRKRAPRH LFGTNYRKPF PWIRVGLGLA AMAAAADIVY RRMSYVSPQE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.88 (PValue = 6.125863e-01)
Components of the Score Function:
Profile Score...............................................: -13.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.59
Term 14 Hydrophobicity of Tail [26..end]...................: -3.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3200 (length 60 amino acids):
MPTWLNVAEK PSVAKEMAQS LSGGNCRTVP SQSRFNPVYE FKFEGKTMLV TSVAGHLMED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -59.25 (PValue = 4.197406e-01)
Components of the Score Function:
Profile Score...............................................: -10.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3060 (length 60 amino acids):
MSSLVSSRKR MAEYSTFSDK WSIIEETIRC IFKKEVSKNS FQRIHHSVFQ LCQAHYGSLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -59.95 (PValue = 4.335791e-01)
Components of the Score Function:
Profile Score...............................................: -10.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.12
Term 4 Volume Compensation (-1, 1, 2).....................: -5.33
Term 5 Volume Compensation (-1, 2)........................: -4.77
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.92
Term 14 Hydrophobicity of Tail [26..end]...................: -0.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3010 (length 60 amino acids):
MASVFTYSAV QNGKTVVLQK YSGYATLIVN VASRCSLAST NIEMLNEVQQ AYGSRRFTVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -61.90 (PValue = 4.727099e-01)
Components of the Score Function:
Profile Score...............................................: -13.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.85
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.83
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2900 (length 60 amino acids):
MLGLTSSKKT TKIWLLLRWV PVTHSGLSLS SWVGLRQACI RTAPPLAAPM CPFHYSPYPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -60.26 (PValue = 4.397257e-01)
Components of the Score Function:
Profile Score...............................................: -5.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.79
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2880 (length 60 amino acids):
MTEVSARKER REQRQRALGV DCVDRLTWKE WEPGKEYKRK ILVKNIDRAS QTIQLSLPVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -52.28 (PValue = 2.906238e-01)
Components of the Score Function:
Profile Score...............................................: -4.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.19
Term 4 Volume Compensation (-1, 1, 2).....................: -3.04
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2770 (length 60 amino acids):
MSAGRASSQH RDRPQSSSRR RYYEDEAYMQ PRDERTSHST LHRRHSSPQQ KPHRHSSASK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -75.41 (PValue = 7.295707e-01)
Components of the Score Function:
Profile Score...............................................: -6.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -1.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.33
Term 14 Hydrophobicity of Tail [26..end]...................: -4.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2510 (length 60 amino acids):
MFSSTSDLAP RRLGSAGPGG DDASALRVMP SAGDPTDEVR VSLASLTARA QRLVSERGAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -31.51 (PValue = 6.429338e-02)
Components of the Score Function:
Profile Score...............................................: 0.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2230 (length 60 amino acids):
MNRILPCDTN MKVLLVDDGA LPMIATAFSQ TELLKHGVYL VESLNSAARQ RNLMKMLRCY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -58.08 (PValue = 3.967422e-01)
Components of the Score Function:
Profile Score...............................................: -6.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.56
Term 14 Hydrophobicity of Tail [26..end]...................: -1.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2140 (length 60 amino acids):
MLPASLSPIP HASGFAVAHT RTPIMGSLFL LIDIDNTLYE YSETGFHHEM HDRIFAFAQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -63.24 (PValue = 4.999464e-01)
Components of the Score Function:
Profile Score...............................................: -9.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.68
Term 4 Volume Compensation (-1, 1, 2).....................: -3.51
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1960 (length 60 amino acids):
MTSKVILLFD VDGTLTPPRN PETQDMKETL AKARAAGFKL GVVGGSDFAK QKEQLGDSIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -38.75 (PValue = 1.159928e-01)
Components of the Score Function:
Profile Score...............................................: -8.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -18.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1905 (length 60 amino acids):
MKGLDMSTPP HQSCAASTGA STTTMSSASP PAISTMCVDV RELLRHSAAA SKDVPSDAQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -61.45 (PValue = 4.637720e-01)
Components of the Score Function:
Profile Score...............................................: -6.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1900 (length 60 amino acids):
MVLNLFSGAA LNGHGSTHRR GRASSSLSST GTGCRPQQQR YQASRSATDG ASMQADGAEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -64.15 (PValue = 5.182566e-01)
Components of the Score Function:
Profile Score...............................................: -7.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.88
Term 14 Hydrophobicity of Tail [26..end]...................: -3.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1780 (length 60 amino acids):
MPLLPLSSTL TSGAWGNPTS SITAFKVREK HEAGMRLLQG GLVYEAIQIF QEASFFDAEN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -56.09 (PValue = 3.587379e-01)
Components of the Score Function:
Profile Score...............................................: -6.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.41
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1400 (length 60 amino acids):
MTESRWITEA LVQFSASPIW LTPIDNFVDD NCCIFSNESE MQLEYTVAHN KFKKLIDSLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -42.72 (PValue = 1.558855e-01)
Components of the Score Function:
Profile Score...............................................: -14.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1395 (length 60 amino acids):
MEARTRLVCD ALTDFQRIVS LCVTERHGRW VMSVADDGPR SGWSCPRCGC TEEDVCTVSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -55.30 (PValue = 3.441428e-01)
Components of the Score Function:
Profile Score...............................................: -7.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.71
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -2.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1220 (length 60 amino acids):
MESLTDRAIT TPLGADTAAH ATRETHDVDS EDGIFGSPLQ LDGSTMGTAE LNSALESLSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -34.38 (PValue = 8.191467e-02)
Components of the Score Function:
Profile Score...............................................: -6.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1210 (length 60 amino acids):
MATSSHRTAM SSLSAAMKQY VQQAAEDDVV CAFGPDYFHG ARTGACVGSL FSATLCWYTF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -44.07 (PValue = 1.716051e-01)
Components of the Score Function:
Profile Score...............................................: -5.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -2.44
Term 5 Volume Compensation (-1, 2)........................: -2.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.76
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1050 (length 60 amino acids):
MNRCGVKRRL SLRLPVVSIA GLRRRARRAA GTRSGSVALC VSAASIGSST SLASTPGRKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -42.03 (PValue = 1.482794e-01)
Components of the Score Function:
Profile Score...............................................: 0.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.55
Term 14 Hydrophobicity of Tail [26..end]...................: -2.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1000 (length 60 amino acids):
MRTSVRWSET ADAVKGIRPP INSLCYSPSG DYVVAACGVR VLVYAASTGT LLHSLKGHQN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -24.82 (PValue = 3.511728e-02)
Components of the Score Function:
Profile Score...............................................: -3.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.43
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.99
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0970 (length 60 amino acids):
MCAPTPTITQ NTHRGAYTGA LLFLVPSKAK MSSKSIDVFN VSQNRLRAAS FQDEEERQNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -92.87 (PValue = 9.209094e-01)
Components of the Score Function:
Profile Score...............................................: -11.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -17.35
Term 14 Hydrophobicity of Tail [26..end]...................: -5.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0890 (length 60 amino acids):
MTLRTRFESS DDIGVFSRLT NAYCLVAAGA SQNFYSVFEQ ELANHICVVY TSIGDARVIG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -47.02 (PValue = 2.097049e-01)
Components of the Score Function:
Profile Score...............................................: -14.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0730 (length 60 amino acids):
MGVLLFPPGH GFRLFVHFSR LSFFVCIFLR LCCSLLPSLA LQTMPSGNTQ HRNWSSSNSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -82.40 (PValue = 8.281302e-01)
Components of the Score Function:
Profile Score...............................................: -6.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.34
Term 4 Volume Compensation (-1, 1, 2).....................: -0.07
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.35
Term 14 Hydrophobicity of Tail [26..end]...................: -3.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0700 (length 60 amino acids):
MFRRLSPAAA TRSMATMTHP LTSATQSQSV TSTRAAVSRV AMRGCSSSSG TSSGDVSSTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -52.74 (PValue = 2.984287e-01)
Components of the Score Function:
Profile Score...............................................: 1.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0540 (length 60 amino acids):
MAVTIKLANG SQHTVEVPDF SITVAEFKKQ IAEALEIPAS EQRIIMRGKV LKDDGVLSAI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -48.84 (PValue = 2.358718e-01)
Components of the Score Function:
Profile Score...............................................: -12.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.27
Term 4 Volume Compensation (-1, 1, 2).....................: -1.97
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0160 (length 60 amino acids):
MQQLQVSACV LLLALLCVTT VRSSGNLQLG TWDVSTLVPG RGAVPPNYEL TVQPGKWTVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -56.98 (PValue = 3.755789e-01)
Components of the Score Function:
Profile Score...............................................: -12.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.75
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.77
Term 14 Hydrophobicity of Tail [26..end]...................: -3.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0150 (length 60 amino acids):
MVLVHLRASN VYDVGGMNEA NTIDFKHMVG VEYHTQREVV RSPPSLTDTK VNHVAMVSMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -59.71 (PValue = 4.288922e-01)
Components of the Score Function:
Profile Score...............................................: -18.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.32
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.24
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0140 (length 60 amino acids):
MLKQLKETVV SAISSSPLNA YELDTSGTTL CGRSDLFEKC DAVVRANGKK VSIFTLCIKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -31.52 (PValue = 6.433987e-02)
Components of the Score Function:
Profile Score...............................................: -1.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.17
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0130 (length 60 amino acids):
MSSEGKETEP PQAGEPSAAV KLPSENSSSS EDTDSDTYTI SQVLFDSLTG RGFSENAIKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -53.10 (PValue = 3.046484e-01)
Components of the Score Function:
Profile Score...............................................: -6.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -2.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.3030 (length 60 amino acids):
MSQLAQPSVS DMYANHAEAA PLADAFLERQ NDNTDALRSS SERGTMRFIG LSNDYGDTPQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -60.00 (PValue = 4.345728e-01)
Components of the Score Function:
Profile Score...............................................: -10.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.21
Term 14 Hydrophobicity of Tail [26..end]...................: -4.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2990 (length 60 amino acids):
MGYGVRLSIL PLSGGCRRWF SGCCTGSILG ADTVSGSLLK TLQEDLSDEN ELRTKGIGET
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -80.26 (PValue = 8.012354e-01)
Components of the Score Function:
Profile Score...............................................: -18.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.51
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.89
Term 14 Hydrophobicity of Tail [26..end]...................: -2.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2960 (length 60 amino acids):
MCCLYPPFRP FPPRVVFPCR CSLLILSCSF LLVPLLFAVC RGNPRRLCLT VGTSLAARAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -44.50 (PValue = 1.767805e-01)
Components of the Score Function:
Profile Score...............................................: -2.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.30
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2860 (length 60 amino acids):
MSAVKVAVTG AAGQIGYALV PLIARGALLG PTTPVELRLL DIEPALKALA GVEAELEDCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -50.63 (PValue = 2.635128e-01)
Components of the Score Function:
Profile Score...............................................: -10.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.36
Term 4 Volume Compensation (-1, 1, 2).....................: -3.02
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2720 (length 60 amino acids):
MNTTTEKVTI NFNTSRFGVK VADGSFDPDT TIGEVHARLR KKLVKAKAMA VPVASGGSEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -73.94 (PValue = 7.051357e-01)
Components of the Score Function:
Profile Score...............................................: -4.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.32
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.04
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2710 (length 60 amino acids):
MRFVFRRLLP ASTAAVAAPP SLLSMRGAPS FVHPPAEEAI GKDVRATPAN WVTAYVLPEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -50.75 (PValue = 2.655207e-01)
Components of the Score Function:
Profile Score...............................................: -18.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2560 (length 60 amino acids):
MGKIRTKTVK RASRQVVEKY YSKLNFDFYQ NKRVIMDVTI AESKKLKNKI AGYTTHIMKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -73.53 (PValue = 6.980586e-01)
Components of the Score Function:
Profile Score...............................................: -13.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2490 (length 60 amino acids):
MDPVQELIAG VGLSDVEGGR RPEQASLSAS STAFDASSAP APAPLLPAAP PRRTKMVFLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -35.80 (PValue = 9.198279e-02)
Components of the Score Function:
Profile Score...............................................: -2.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2415 (length 60 amino acids):
MISCVPRPPP SSRLCAHRVC TASFAALAPP PLLPLHLVCR GFLSRVSFST AAAAAIPIPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -32.64 (PValue = 7.080643e-02)
Components of the Score Function:
Profile Score...............................................: 0.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.64
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.37
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2400 (length 60 amino acids):
MLLRDTRAYP NTPQLCTRML AHRGTIAKDG DVVLVVHGHQ NIVPLVLQRG AVLHCKAGKF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -41.83 (PValue = 1.461162e-01)
Components of the Score Function:
Profile Score...............................................: -4.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -6.28
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.81
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2360 (length 60 amino acids):
MAFRGSSARL AATPGVGIAP ETTPVKYVPE MLNIQNAKWW NGRGKPVYRS TYNEKSWLEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -92.69 (PValue = 9.197683e-01)
Components of the Score Function:
Profile Score...............................................: -21.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.04
Term 4 Volume Compensation (-1, 1, 2).....................: -2.14
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.97
Term 14 Hydrophobicity of Tail [26..end]...................: -3.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2230 (length 60 amino acids):
MISKGGNSGL GGGSGVNPRL VAKVSGVQRA TAFLSAINPT ELRPHPLRGV ARSITEDSSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -78.55 (PValue = 7.776088e-01)
Components of the Score Function:
Profile Score...............................................: -9.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.97
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.2090 (length 60 amino acids):
MNSLQGSSQV SPEHLKSMKS AIHSFLQETG VYDSIRDIVD TYVSEHGDEA VSSENPSAIM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -53.06 (PValue = 3.039982e-01)
Components of the Score Function:
Profile Score...............................................: 1.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.38
Term 14 Hydrophobicity of Tail [26..end]...................: -2.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0030 (length 60 amino acids):
MPNDAAVVYI FLDDADKAVS MEDVKEWLQI INDVVEIKLQ FDVATERPCY YVEFRSPVAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -61.10 (PValue = 4.565652e-01)
Components of the Score Function:
Profile Score...............................................: -8.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.24
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0020 (length 60 amino acids):
MSAPIRVTVE APINIAFIKY WGKREGGETL ILPTNDSFSI TLSTKPFRSK TSVELRSDAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -57.04 (PValue = 3.767327e-01)
Components of the Score Function:
Profile Score...............................................: -12.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.83
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2860 (length 60 amino acids):
MTAPRNKIHR IGKRKGATLK DVSAWRWIKT AARHFKQEGK IFVPNCTEIM KSSHGRERAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -84.87 (PValue = 8.554663e-01)
Components of the Score Function:
Profile Score...............................................: -14.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.83
Term 14 Hydrophobicity of Tail [26..end]...................: -3.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2360 (length 60 amino acids):
MATIMSEHVV KMAKEFVNFM NQAITPFHAV QTVAKMLKDA GYTQLHEEKV WPELTPGGKY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -57.90 (PValue = 3.933399e-01)
Components of the Score Function:
Profile Score...............................................: -12.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2220 (length 60 amino acids):
MSTTSSPDEA SCDVEKEGKG ISPVTRTGKR FAECALMDLP DKYSSAFPYL RGARLFFFDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -45.28 (PValue = 1.865362e-01)
Components of the Score Function:
Profile Score...............................................: 1.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.44
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2050 (length 60 amino acids):
MGGALCMHQP HASNHRAQPV ASQPFAQESD DTSNDVPRLG SSTPPDEPAV PGPPALKNVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -38.56 (PValue = 1.143336e-01)
Components of the Score Function:
Profile Score...............................................: 2.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1920 (length 60 amino acids):
MSSTAVAKAL PDIQPVHICV QDVRVHEVQM PHQTHFTVET AGTWRCEEAS ISVMRSVARH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -38.77 (PValue = 1.161638e-01)
Components of the Score Function:
Profile Score...............................................: -2.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.19
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1820 (length 60 amino acids):
MTDTMQQTVN ICEDDLSAAL KMPIRAHVRL VGIEGTHPDV VASDLETIKR CRTMEEAVEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -71.69 (PValue = 6.654174e-01)
Components of the Score Function:
Profile Score...............................................: -15.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.59
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1800 (length 60 amino acids):
MTMMSVLANA LRTIASAERR GKRQVLIRPS SKVVVKFLQV MQKHGYIGEF EIIDDHRAGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -92.98 (PValue = 9.215908e-01)
Components of the Score Function:
Profile Score...............................................: -26.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1720 (length 60 amino acids):
MATPRSAKKA ARKSSTKSAK AGLIFPVGRV GGMMRRGQYA RRIGASGAVY LAAVLEYLTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -20.53 (PValue = 2.301637e-02)
Components of the Score Function:
Profile Score...............................................: -2.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1660 (length 60 amino acids):
MATLTEDEIA PSAIAAERER LQEATQHVAE LERRLDALQR ELEAACTRRE QLLLSVQWRE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -62.26 (PValue = 4.800480e-01)
Components of the Score Function:
Profile Score...............................................: -21.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.58
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1640 (length 60 amino acids):
MSLTTTARTP ATVGKLSPSS GIFSIPDNIS PVTAEEVPKS RDSLLTDMSL SELSRQSVLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.58 (PValue = 1.903235e-01)
Components of the Score Function:
Profile Score...............................................: -5.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.35
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.51
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.24
Term 14 Hydrophobicity of Tail [26..end]...................: -0.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1575 (length 60 amino acids):
MPAEDPANVS ALVAAEAECR RYVYLFDATS GTCLAALHFC GSPVLALRAN SSVLVVAAVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -17.02 (PValue = 1.590934e-02)
Components of the Score Function:
Profile Score...............................................: 2.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.48
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.99
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1540 (length 60 amino acids):
MQCTSRLLGG YMMYHRKSMS TMRYSKWKGA RGGLSHFYNR TAMLEKVPVN MPVSIVDRRM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -73.70 (PValue = 7.010778e-01)
Components of the Score Function:
Profile Score...............................................: -15.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.33
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1480 (length 60 amino acids):
MTKGSEYPFA AARIALLYRF KSVVCSSSVM RMSAVSQVPP RLLFFSFPVC TSYRFLSKLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -47.29 (PValue = 2.134336e-01)
Components of the Score Function:
Profile Score...............................................: -0.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -1.30
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1460 (length 60 amino acids):
MRYQRPPPPH GSITDAWRAV SLERFLALFC ICTGVAAATP VASVSSSPGA VVQSSTPLGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -46.75 (PValue = 2.059752e-01)
Components of the Score Function:
Profile Score...............................................: -2.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.35
Term 14 Hydrophobicity of Tail [26..end]...................: -1.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1350 (length 60 amino acids):
MKTPQMHSIV TVSPIPIDVE QQQQQSHPRR TSSSSPGTPP MSATKLRHSS GVAVPTSSQS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -40.92 (PValue = 1.366841e-01)
Components of the Score Function:
Profile Score...............................................: 5.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1330 (length 60 amino acids):
MSLPCPSSSS PLLGSITSGV RSPSRGPVQQ QQLLHQRHAS MRLRLHKDGS ICACPEKSGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -82.26 (PValue = 8.263796e-01)
Components of the Score Function:
Profile Score...............................................: -1.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0805 (length 60 amino acids):
MLTSAEEAYT EYLERRVVAG GVDATIVRAA LQQMGFDEKT IAAMMGDTSA YSLPFSTTSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -37.35 (PValue = 1.040295e-01)
Components of the Score Function:
Profile Score...............................................: 0.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -3.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0560 (length 60 amino acids):
MSPHNKRGKA KEAANKQRKA NQHQRHSTSK GQHTYFVTRS GGGDSYLSTH TSAKQNKVKH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -64.80 (PValue = 5.315649e-01)
Components of the Score Function:
Profile Score...............................................: -4.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.39
Term 14 Hydrophobicity of Tail [26..end]...................: -3.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0510 (length 60 amino acids):
MAISGVTLEE SVRGAIDDLR MKKSRYVMMC IGADGKKIEV TEVGERGVNY TDLKEKFSAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -76.73 (PValue = 7.506162e-01)
Components of the Score Function:
Profile Score...............................................: -18.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.35
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.15
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0460 (length 60 amino acids):
MAIPPLRASD LSSPSPSIAP QRERTRSVGT RLRTSITRDD AERVLPASSS QVETLARDAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -63.01 (PValue = 4.951376e-01)
Components of the Score Function:
Profile Score...............................................: -4.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0220 (length 60 amino acids):
MMYSAGAMYA EIYRNQAAAA AAKPREESAP PPNLHHTFED PNQFYTAPAL GYGQQPPVPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -73.35 (PValue = 6.949262e-01)
Components of the Score Function:
Profile Score...............................................: -11.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.83
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0170 (length 60 amino acids):
MSRLKHVEWD EKNLEANAEY QRQHPVTIHI TEPKTPYSYA DGDDLEAEEE GLLKWDPAVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -45.64 (PValue = 1.911094e-01)
Components of the Score Function:
Profile Score...............................................: -9.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.44
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0080 (length 60 amino acids):
MNHSPFLTAL YTDVQSRLPL WTTRYVKPIS NGTFAVSSTW TDDSGAQLQR LFIAVEASDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -44.29 (PValue = 1.742046e-01)
Components of the Score Function:
Profile Score...............................................: -2.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0040 (length 60 amino acids):
MLAAIQGFGT RVAARTAGQA LRRGLGVVPL RRCCPFRCAS SASLPSDVEV HQGSDDYRHS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -78.45 (PValue = 7.762738e-01)
Components of the Score Function:
Profile Score...............................................: -6.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.33
Term 14 Hydrophobicity of Tail [26..end]...................: -4.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6860 (length 60 amino acids):
MSSVTPPVAP ASPAVARKVT FALSGGAKEV VVPSLPAVLM LAPSVPVMLP PTAVPLAAPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -27.78 (PValue = 4.625377e-02)
Components of the Score Function:
Profile Score...............................................: 2.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.07
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6660 (length 60 amino acids):
MKKTVEDRSL EFLIRRRNDA ELPPLASLSC KHLKQHHWRD AFDDEQAALR EQLWAVKTQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -61.57 (PValue = 4.661412e-01)
Components of the Score Function:
Profile Score...............................................: -26.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.54
Term 4 Volume Compensation (-1, 1, 2).....................: -2.20
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.17
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6590 (length 60 amino acids):
MADATPQQEE RIAAQRTRIQ TKLHARDGPN ASNAGLPNAA VSRSEAEKKA LDTRYEMWAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -59.56 (PValue = 4.259183e-01)
Components of the Score Function:
Profile Score...............................................: -7.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6410 (length 60 amino acids):
MLSSRGAITT NVALAECAAG QNTSDKSVFL LSELEKVWVA VAVVARRLLL DGSAVQIAPF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -46.95 (PValue = 2.087466e-01)
Components of the Score Function:
Profile Score...............................................: -16.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.37
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.07
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6190 (length 60 amino acids):
MVLNKWAAVT KSAPPAAGLR PLARTVSPNP KLRPADYKVP YVLRTFIKDR HSSEMQHIEN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -105.92 (PValue = 9.742109e-01)
Components of the Score Function:
Profile Score...............................................: -23.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.33
Term 4 Volume Compensation (-1, 1, 2).....................: -4.37
Term 5 Volume Compensation (-1, 2)........................: -5.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.19
Term 14 Hydrophobicity of Tail [26..end]...................: -4.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -66.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6100 (length 60 amino acids):
MTEVLKKQLA DAKAAFYAGN YADAEKVLRA MPQEDMKVQH NLVIARYLQH QLTSEQALAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -62.88 (PValue = 4.926116e-01)
Components of the Score Function:
Profile Score...............................................: -24.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.92
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6090 (length 60 amino acids):
MRVLRGKVGK VVLAAVGIPT ISVAGLSGYV HYRQRTRPPP RVLKPLVDAN GNLILEGRVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -49.58 (PValue = 2.470052e-01)
Components of the Score Function:
Profile Score...............................................: -21.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -2.31
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.99
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.98
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5980 (length 60 amino acids):
MEEVDHRLRD SLPTEAVTTV ARSVLSGASI FPPPPSPPVG AGRYGPIFHG RPPDAWGAPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -61.61 (PValue = 4.669340e-01)
Components of the Score Function:
Profile Score...............................................: -7.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: -0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.19
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5920 (length 60 amino acids):
MFRAARLLRG VSPFSVFLMD QKNNPSLQGV SIAKRGKMLS KMYKELSQQQ RRDLQKRAEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -81.89 (PValue = 8.219647e-01)
Components of the Score Function:
Profile Score...............................................: -20.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.08
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0350 (length 60 amino acids):
MTAFTVVYNL LTYTAGGFSV IMNASPVIAI RRLEQSGTVG ASTVTFYGAQ LYNAVTWTSY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -42.10 (PValue = 1.490619e-01)
Components of the Score Function:
Profile Score...............................................: 0.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.36
Term 14 Hydrophobicity of Tail [26..end]...................: -1.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0260 (length 60 amino acids):
MHVLCQGYLE TYETPEALAR DTAWWLGEAA CLHAAHTEGK RHTHVPGEAP SAAVERWGEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -59.34 (PValue = 4.215498e-01)
Components of the Score Function:
Profile Score...............................................: -2.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.03
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0150 (length 60 amino acids):
MTSESHDVIV AEQASSAWSV LQEEACELRW YVLMVACLLT FGSYYIYDFP GSIGSGRGNT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -81.06 (PValue = 8.116431e-01)
Components of the Score Function:
Profile Score...............................................: -15.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.29
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.17
Term 14 Hydrophobicity of Tail [26..end]...................: -1.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0120 (length 60 amino acids):
MEAEEITQVS IGNATTAPML FCSRCNNLLY PECDDDNYSM TWRCNYCKTT EQHDDCKLVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -82.63 (PValue = 8.308080e-01)
Components of the Score Function:
Profile Score...............................................: -27.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.64
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -0.01
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.91
Term 14 Hydrophobicity of Tail [26..end]...................: -2.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0100 (length 60 amino acids):
MKQPYRSTWR VYLPGLFVMS MFSVVVYFSR TRSDVVKYGY DFVPIYSEDG KLEGFTHPVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -47.96 (PValue = 2.228971e-01)
Components of the Score Function:
Profile Score...............................................: -2.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.58
Term 4 Volume Compensation (-1, 1, 2).....................: -3.37
Term 5 Volume Compensation (-1, 2)........................: -2.40
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1680 (length 60 amino acids):
MSELKIGFLG CGSMGECIMA GLLKAKALGP ENTFICNRSA STNERLVSLY QVKSVSAVEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -34.29 (PValue = 8.130234e-02)
Components of the Score Function:
Profile Score...............................................: -5.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.48
Term 14 Hydrophobicity of Tail [26..end]...................: -0.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1570 (length 60 amino acids):
METSLPLAIS HQTKEEGDSV SSVHVLRPAC FEASAITSGA RGTIAAGKGS SNTNVDASPN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -59.92 (PValue = 4.330581e-01)
Components of the Score Function:
Profile Score...............................................: -4.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.77
Term 14 Hydrophobicity of Tail [26..end]...................: -2.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1370 (length 60 amino acids):
MNFGACPADI EDDEVVASFN VYASPALVNQ AHIFQYPLRR RQRPYEATEI KLFSTSGTVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -58.84 (PValue = 4.116913e-01)
Components of the Score Function:
Profile Score...............................................: -12.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.65
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -1.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1340 (length 60 amino acids):
MSRRALFASD SDDDSADVFR LAAAGAGDRA MSGTSGSSLA KDPLSAGAAS QLHPSSLDSD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -46.38 (PValue = 2.009916e-01)
Components of the Score Function:
Profile Score...............................................: -3.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.72
Term 14 Hydrophobicity of Tail [26..end]...................: -2.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1320 (length 60 amino acids):
MRSCAALPLA ALLVLLTLSG MAEVAQAQGL PGLLTLQMKG YMSYSASSLS SSGIEVTYFT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -52.93 (PValue = 3.017189e-01)
Components of the Score Function:
Profile Score...............................................: 1.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.85
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.18
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0970 (length 60 amino acids):
MAQIPSAMRP PSKASTSAVA SLLPPCCQPI YQQRRCYASR SGEEKGNADK GTQAAAAAVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -49.83 (PValue = 2.509719e-01)
Components of the Score Function:
Profile Score...............................................: -7.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.08
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0580 (length 60 amino acids):
MNSGMSAPRR SNGAGANASI GGSNADVLGG GAAPQYSRMN SNEAVPGVVY RATVPSNIRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -46.16 (PValue = 1.980501e-01)
Components of the Score Function:
Profile Score...............................................: -2.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.79
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0450 (length 60 amino acids):
MSAENGGNAI VRVSSNKRKF GYVDYTKHRL HEGYPEVIVS ALGTAIADAV SVVELLKNQG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -38.68 (PValue = 1.154171e-01)
Components of the Score Function:
Profile Score...............................................: -5.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.41
Term 14 Hydrophobicity of Tail [26..end]...................: -0.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0020 (length 60 amino acids):
MLTGTLPQLQ HGATPAQRGA SSAMNDSNDI LALRTACGTF GVVCFSVLIF AFLGHIALAL
Best predicted site is shown in red.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
Potential GPI-modification site was found.
Quality of the site ............... : S
Sequence position of the omega-site : 37
Score of the best site ............ : 1.16 (PValue = 1.374771e-03)
Best Site
Total Score.................................................: 1.16
Components of the Score Function:
Profile Score...............................................: 1.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.25
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1060 (length 60 amino acids):
MRHLSDVVVA NRDSEYEDKV NGDGAGDGLA DGAAAASSLA EEDVSEPPLE FLVRHAMYAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -48.81 (PValue = 2.353835e-01)
Components of the Score Function:
Profile Score...............................................: -6.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0760 (length 60 amino acids):
MATIGMFNEE GENVDLYIPR KCHATTTLIE AHDHAAVQIS IANVGPNGVI NGTTTTLCIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -35.03 (PValue = 8.639432e-02)
Components of the Score Function:
Profile Score...............................................: 0.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0750 (length 60 amino acids):
MAAADQLRYA AQMIELARSE EREDGNPLTA ARCYTTAMEV IASEASKRAA MIESNEARRF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -64.74 (PValue = 5.303030e-01)
Components of the Score Function:
Profile Score...............................................: -10.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.77
Term 14 Hydrophobicity of Tail [26..end]...................: -4.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0730 (length 60 amino acids):
MPSAPPEEFK VEFISSSSSV QSSAVPSRTT SRGASSSSEA AATEKIDAEH APADASDAGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -54.17 (PValue = 3.235538e-01)
Components of the Score Function:
Profile Score...............................................: -8.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0700 (length 60 amino acids):
MDPTLKELLH ANLEWIFVGG KGGVGKTTTS CALATLFATT PISDAASPGG TRPRRVLLIS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -23.30 (PValue = 3.031894e-02)
Components of the Score Function:
Profile Score...............................................: -2.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -20.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0590 (length 60 amino acids):
MEGFVEQLRA RVRYVQAGGV VSAEEAAKAG VSISSREVDD RVRKLHLSRG KMLARERIER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -65.09 (PValue = 5.372866e-01)
Components of the Score Function:
Profile Score...............................................: -8.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -1.96
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0580 (length 60 amino acids):
MSASELRVYS WEEIAKHTND DDCWVVMYDK VLDVSKWLQE HPGGLDPIKD MAGMDITNSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -58.35 (PValue = 4.019396e-01)
Components of the Score Function:
Profile Score...............................................: -10.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.63
Term 14 Hydrophobicity of Tail [26..end]...................: -2.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0340 (length 60 amino acids):
MVYKRKRQSK KARRTPARKL PKAVEAAAVA AALVPVGGAD EGAAVQRCDA GFSSALSTDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -44.41 (PValue = 1.757186e-01)
Components of the Score Function:
Profile Score...............................................: -1.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2375 (length 60 amino acids):
MKAAQAKAVD NPKDDFWIEK CVGNAAVIYS KDTTNRLTDL AGALLVMCIS VYFTVGGYLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -30.72 (PValue = 6.004164e-02)
Components of the Score Function:
Profile Score...............................................: -4.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.82
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1950 (length 60 amino acids):
MSSSSIKVAV RCRPLFGQER PAGGLDIQNR RILLDSKTYD PDFTFSPTST QEDVFQACRP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -75.66 (PValue = 7.336633e-01)
Components of the Score Function:
Profile Score...............................................: -5.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.94
Term 4 Volume Compensation (-1, 1, 2).....................: -2.56
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.88
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -58.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1490 (length 60 amino acids):
METMHTRSES PPEAPSEEIP LLIEDFSCAN SFEECVKVIE QYLAALFDGE PLLQSFLVAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -43.79 (PValue = 1.681959e-01)
Components of the Score Function:
Profile Score...............................................: -18.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1330 (length 60 amino acids):
MDTRFHCVYL LTSLDPQCEG DFYIGYSVNP LRRLRQHNGE LVNGARRTGR RGRPWTIVCC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -48.33 (PValue = 2.283172e-01)
Components of the Score Function:
Profile Score...............................................: -1.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1230 (length 60 amino acids):
MVHRSEGKQD RGEGERKIKG CQRTTSHTTA SSELPRWSAS VTRRPSTLSM ARRLPRGRIS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -52.92 (PValue = 3.016269e-01)
Components of the Score Function:
Profile Score...............................................: -2.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.80
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1050 (length 60 amino acids):
MNCARLHQRI PLRAMALATT GYPALASSHS FANASTSVMT ASAMAVVRRA ATTTGASAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -41.79 (PValue = 1.456848e-01)
Components of the Score Function:
Profile Score...............................................: 1.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.93
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1040 (length 60 amino acids):
MPLLPVPLDT ASASSSTSQQ AATRATAAGP AADVPAASQT STTTHWQLSS PESHRHRSDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -91.63 (PValue = 9.128581e-01)
Components of the Score Function:
Profile Score...............................................: -7.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.39
Term 14 Hydrophobicity of Tail [26..end]...................: -4.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -72.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0980 (length 60 amino acids):
MEDPQVAAVA GRPGSASEMN RHIRSDLRHH YIFSRVKDFL SGGDAAKADE LARQLDRNFT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -71.95 (PValue = 6.700778e-01)
Components of the Score Function:
Profile Score...............................................: -16.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.64
Term 14 Hydrophobicity of Tail [26..end]...................: -2.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0870 (length 60 amino acids):
MSSSNAQAEL GPGGSTHSIE LGRLIFQGAE SKVYCCSFYG ALALCKHRFV KRYRDPSLDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -92.42 (PValue = 9.180951e-01)
Components of the Score Function:
Profile Score...............................................: -11.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.90
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -32.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -65.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0860 (length 60 amino acids):
MLSAPYRPRV VPLLASDGQQ LMEKAADAAA GDFGTYPALQ RPTSNVRNRI GGMGSSSADD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -85.20 (PValue = 8.588841e-01)
Components of the Score Function:
Profile Score...............................................: -13.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0620 (length 60 amino acids):
MSSRSSHYSA KSLSSSAGES MVTSHSTGSS SRHRRTGTVC IHEPRAPPMK MTAMELLQHI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -57.61 (PValue = 3.875792e-01)
Components of the Score Function:
Profile Score...............................................: -18.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.49
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0180 (length 60 amino acids):
MALSHAMITG PRLYRPSCAA LRQSVCTVPQ SRRCSTLGQI QSVFKALRQA KGVRGGAVRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -57.53 (PValue = 3.860543e-01)
Components of the Score Function:
Profile Score...............................................: -12.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0020 (length 60 amino acids):
MLPSVVPLPF LSRFSCLRVR KERQKVNVNR AVVQQGDRRR TMTTYRRMTL CDTLQFNFVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -73.51 (PValue = 6.977929e-01)
Components of the Score Function:
Profile Score...............................................: -19.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.26
Term 4 Volume Compensation (-1, 1, 2).....................: -3.11
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.45
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3900 (length 60 amino acids):
MGKTVLSCRK GNGSVYQVHG HKRLGPAKLR ILDYAERHGY MRGVVKSIEH EAGRGAALAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -69.61 (PValue = 6.265088e-01)
Components of the Score Function:
Profile Score...............................................: -21.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3640 (length 60 amino acids):
MQAAAHTHTH THTHSDRHPL LTPHASAVVM PTFWKEQAHV RRLYSAPDST SELIATCDKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -63.46 (PValue = 5.043457e-01)
Components of the Score Function:
Profile Score...............................................: -6.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.19
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -2.72
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.70
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3504 (length 60 amino acids):
MDAPVNVFLR FGLSHSERLN HLLERVGTAQ AAFRIVGPRQ QEGVARTPAH PHDGADCARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.74 (PValue = 4.493134e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3260 (length 60 amino acids):
MRIVISETAE KVADYTSNYV IKSINDFKPT EDRPFVLGLP TGETPMRTYQ KLIVAYRKGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -49.20 (PValue = 2.413137e-01)
Components of the Score Function:
Profile Score...............................................: -10.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.58
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3160 (length 60 amino acids):
MSEGVGGGAG DASDRRLISA TANTKGSRPS TKTASKEKEK VSAGGKHKNL LKSSQEASTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.21 (PValue = 3.242066e-01)
Components of the Score Function:
Profile Score...............................................: -1.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.69
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.58
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2870 (length 60 amino acids):
MDGYRTPAGP PLQVGPARNR IGLTNIQMRT VTVCIIGPAV LAWSGYSERC ATVLSFFATF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -39.50 (PValue = 1.228863e-01)
Components of the Score Function:
Profile Score...............................................: -9.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.65
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2850 (length 60 amino acids):
MPVKPQFTWE QTGEDVLLQI TIKGCKKDTV DVLIADVFVK VNAPPQYLLA LDLLHAIDSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -39.62 (PValue = 1.239716e-01)
Components of the Score Function:
Profile Score...............................................: -17.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.24
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -1.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.42
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2740 (length 60 amino acids):
MHRSPFSCEG IAILARVLLC HLTAFFFFVV LTVLLFEHSD GRRALYFALR RLSASLGGGH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -52.31 (PValue = 2.912269e-01)
Components of the Score Function:
Profile Score...............................................: -10.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.13
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2620 (length 60 amino acids):
MMRRSSLLLS GGMVEYHEWH LHEPLLQNYE GWRILDNPKY EQKSDAYIYD FMGSVRHLDP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.92 (PValue = 4.530882e-01)
Components of the Score Function:
Profile Score...............................................: -14.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.86
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2580 (length 60 amino acids):
MLSVAARPPP PPPPPGTHAH TPTCSTMNLL HVVQTSYEPG TYIMDGCLCN GSSSLALSLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -23.00 (PValue = 2.946512e-02)
Components of the Score Function:
Profile Score...............................................: -13.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.07
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2390 (length 60 amino acids):
MIPRYDGLVP AIRGPASACA VASVNATPSS TTKRTAAATT VARYVICPVE TTGTENAHVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -54.39 (PValue = 3.274706e-01)
Components of the Score Function:
Profile Score...............................................: -5.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.92
Term 14 Hydrophobicity of Tail [26..end]...................: -2.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2330 (length 60 amino acids):
MFLVNASVAG ACGALSGVVG KLAVESSRVP SLVRSGGLYL QLDLATMEMV QAVVPWLLRI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -38.87 (PValue = 1.170567e-01)
Components of the Score Function:
Profile Score...............................................: -6.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.62
Term 4 Volume Compensation (-1, 1, 2).....................: -2.14
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.87
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2290 (length 60 amino acids):
MFVVTSKPAS HFVGPSSAQD FTPVPSPPLT TLASTRRDAV REGVAVSATC TDDTTNGIGN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -62.54 (PValue = 4.856799e-01)
Components of the Score Function:
Profile Score...............................................: -16.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.38
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2260 (length 60 amino acids):
MSTEEQQVTQ GTAHAPAPTT VKNKANSYYY WHQHEKDRAK VGDVAPMPTP YLVSKDDARA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -75.24 (PValue = 7.269085e-01)
Components of the Score Function:
Profile Score...............................................: -12.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.23
Term 14 Hydrophobicity of Tail [26..end]...................: -2.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2230 (length 60 amino acids):
MGIKGRRKKL RQREELARQQ QAQGCGSVDD DEAEGVGDGL ASRVVAMGDG PFRLPVDAMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -52.01 (PValue = 2.860620e-01)
Components of the Score Function:
Profile Score...............................................: -9.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.28
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2210 (length 60 amino acids):
MSALIPSDAV ALLYRRYLKA THRIPNVTIR MLLLQQVRSG FHRNRNITSV SAQRELINQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -71.62 (PValue = 6.641160e-01)
Components of the Score Function:
Profile Score...............................................: -8.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.07
Term 4 Volume Compensation (-1, 1, 2).....................: -4.52
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.47
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2150 (length 60 amino acids):
MDSSHLIALL NGLRSADNQE RKSAEEHYNG MVASSPVWMM CALAETSATS QDTSVRTMSL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -47.41 (PValue = 2.150396e-01)
Components of the Score Function:
Profile Score...............................................: 2.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2140 (length 60 amino acids):
MGNSSSREWF DPYAVNTPLA GVCAVSCLFN SVPNGVLRIS NVYTNVTLLV LLGCSTGLST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -21.88 (PValue = 2.636960e-02)
Components of the Score Function:
Profile Score...............................................: -2.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.71
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1940 (length 60 amino acids):
MSASKQRNGG AAVREAKMTQ EGAATQTSRC SPLPRGGNSA TAAAFLNGTS EMPAVENNGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -52.57 (PValue = 2.956254e-01)
Components of the Score Function:
Profile Score...............................................: -7.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.71
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -1.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1850 (length 60 amino acids):
MAGAKGGNAA SPTDASPSDS ERRLWDTWRD NRERLEREVQ ILTQYSHKLV EETQTVQDAM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -87.06 (PValue = 8.767450e-01)
Components of the Score Function:
Profile Score...............................................: -18.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.80
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.92
Term 14 Hydrophobicity of Tail [26..end]...................: -2.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1830 (length 60 amino acids):
MASRDTAGHR ELVRFLEALQ LVKFDTLPCA AVPTTMRARA ELRPFQLQAL YWLLSREQPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -55.13 (PValue = 3.408643e-01)
Components of the Score Function:
Profile Score...............................................: -5.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1810 (length 60 amino acids):
MRAPVKVTTV ADASAERAAT SCFLVNARRF YLAPSRICMD EASSTAGQQQ QQTPTPGAPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -45.59 (PValue = 1.904920e-01)
Components of the Score Function:
Profile Score...............................................: -0.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.04
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1160 (length 60 amino acids):
MPVFGARMVG AGCMLAVAGA AVAYGVDPAN MDACIAVMYP QCAGFFGAMG AAAALVFANL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -10.77 (PValue = 7.715848e-03)
Components of the Score Function:
Profile Score...............................................: 1.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.05
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0880 (length 60 amino acids):
MKAKLNAVPR KARKSISFNA NRNKVRFIRV PPRSQNGKFW FTETQRIVKK GLNFEVEPEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -78.14 (PValue = 7.717576e-01)
Components of the Score Function:
Profile Score...............................................: -23.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.59
Term 4 Volume Compensation (-1, 1, 2).....................: -3.33
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.45
Term 14 Hydrophobicity of Tail [26..end]...................: -2.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0870 (length 60 amino acids):
MLLSAVTGRL YGLAKGLAKV YLHNETVDLA LEMLLADSIP GAAEAFIGAA SADGRALSMD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -49.66 (PValue = 2.482958e-01)
Components of the Score Function:
Profile Score...............................................: -6.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.09
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.77
Term 14 Hydrophobicity of Tail [26..end]...................: -1.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0840 (length 60 amino acids):
MRLPEGTSHT VARGTCATFH RAFPSQTCRQ APTPPLSHTA THISDGSTTA SRYGLHTRCR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -63.52 (PValue = 5.056441e-01)
Components of the Score Function:
Profile Score...............................................: -9.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.73
Term 14 Hydrophobicity of Tail [26..end]...................: -2.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0770 (length 60 amino acids):
MALSPESADL NIEKPVILAY HRQADFAAFL VNEYFIKPSK QLEEARQDDT NGLLPLVSLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -25.69 (PValue = 3.811177e-02)
Components of the Score Function:
Profile Score...............................................: -17.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0960 (length 60 amino acids):
MRLLSKVIVG TTCVTVFCGS AYVAAITLAP PPNYTVSNND RLKSYDKLSI NNLYEKKTKC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -93.15 (PValue = 9.226138e-01)
Components of the Score Function:
Profile Score...............................................: -26.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.12
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0890 (length 60 amino acids):
MKIKKKDLRK REAQLPINYP DPDVLPDSLP GGVIDLESEM VQVEILCKRL AHNEVAVRDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -67.06 (PValue = 5.767828e-01)
Components of the Score Function:
Profile Score...............................................: -13.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0830 (length 60 amino acids):
MQTSLLGRIG GAALCPKRLF QSTAAASAGT TTAAAVNSSR SSDGGANASA SSDTSSHTQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -55.62 (PValue = 3.500370e-01)
Components of the Score Function:
Profile Score...............................................: -3.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.99
Term 14 Hydrophobicity of Tail [26..end]...................: -4.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0820 (length 60 amino acids):
MCEAERVHPL LRYVLRRCVC ALTRTHAREH THTQQQRKAA VFSVMFILRI AGDVDGFKRN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -78.86 (PValue = 7.820068e-01)
Components of the Score Function:
Profile Score...............................................: -32.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.94
Term 4 Volume Compensation (-1, 1, 2).....................: -2.64
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.54
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0750 (length 60 amino acids):
MFRGHWIVAD MDGTLTPTPT RAHGKYLTLS YCMQTGLGHG AHYKSCLPWL RLFLECGGTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -39.78 (PValue = 1.254928e-01)
Components of the Score Function:
Profile Score...............................................: -10.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.52
Term 4 Volume Compensation (-1, 1, 2).....................: -1.54
Term 5 Volume Compensation (-1, 2)........................: -2.63
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0630 (length 60 amino acids):
MTDSFTEVSP AVVAAHNAEA MRDEVLRRME VYVLELLHTL LSLPIKRVLP RGNAVAAFNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -64.26 (PValue = 5.206293e-01)
Components of the Score Function:
Profile Score...............................................: -20.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.06
Term 4 Volume Compensation (-1, 1, 2).....................: -4.25
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -8.17
Term 9 Volume Limitation [3..8]...........................: -2.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.90
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0450 (length 60 amino acids):
MAPRPFFTSG RGSSSDSGSG WALPKQIASW YPRKGGEFLG NTIAGHNAFI QDIPTRFDEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.96 (PValue = 6.520150e-01)
Components of the Score Function:
Profile Score...............................................: -13.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.95
Term 5 Volume Compensation (-1, 2)........................: -2.94
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0330 (length 60 amino acids):
MHATLLRSGI RTVVPPPKAS PLYRFLREST AQSVLDADNS TKMASEPLAS VLPKGSSTES
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -59.20 (PValue = 4.187769e-01)
Components of the Score Function:
Profile Score...............................................: -2.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.06
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -3.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0320 (length 60 amino acids):
MYILELNYGD GEIHRHFLLP DQTYTLGRKT CRILLPAAEP SISRHHATIF VAAMPRYSVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -39.62 (PValue = 1.239971e-01)
Components of the Score Function:
Profile Score...............................................: -15.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0270 (length 60 amino acids):
MLVRSSSSRA SKPTRHTWMA LMMDECATMA PLHIAVFVQR TFEDSCRVPA KGSAGQTASI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -60.44 (PValue = 4.434532e-01)
Components of the Score Function:
Profile Score...............................................: -10.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.43
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0230 (length 60 amino acids):
MEVNATLIDC CDPQKPSRVL FHFLILDAPS PSNLPTYIKE LQHRGVRHLV RVCGPTYDAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -77.82 (PValue = 7.671127e-01)
Components of the Score Function:
Profile Score...............................................: -16.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.13
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0210 (length 60 amino acids):
MTDAIIHLTA GTVAGMTGVL LDYPLDTVKT RMQVSRCANV PRRYSPTAVM AASSLSAAAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -43.43 (PValue = 1.639858e-01)
Components of the Score Function:
Profile Score...............................................: -5.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.72
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -2.72
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.36
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0160 (length 60 amino acids):
MLRWSRLLRG RPPPVMGHAK RMRFAGVDDN PSVTHKPWDT SEPLMADYGW ERGKLPKFRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -72.28 (PValue = 6.760100e-01)
Components of the Score Function:
Profile Score...............................................: -21.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.63
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2620 (length 60 amino acids):
MSVSSPLDGG GAGGTVVQSS ATHRGASAPA NTTAATAEPH TPLFTAAENA ELQAIEAECN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -61.22 (PValue = 4.589745e-01)
Components of the Score Function:
Profile Score...............................................: -8.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.83
Term 14 Hydrophobicity of Tail [26..end]...................: -2.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2610 (length 60 amino acids):
MQSTLQQLQH DLAFHAKRRI EAEREAGGHL ASAPRPRPSS DSESVTPLRA ETTAAQQRRV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -70.36 (PValue = 6.406947e-01)
Components of the Score Function:
Profile Score...............................................: -9.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2480 (length 60 amino acids):
MLRCNISQRV PTHPVVSVKS GLVFERSLVE KYVDEHGRCP VTGDPLRKED LITAQGAAPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -67.16 (PValue = 5.788286e-01)
Components of the Score Function:
Profile Score...............................................: -12.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2460 (length 60 amino acids):
MSLDTDYEVE RYAFVAGCRV KVCRCTHRST GSKRAVKVYH TAAMDSRRAA MAVEEGMLAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -49.52 (PValue = 2.460688e-01)
Components of the Score Function:
Profile Score...............................................: -6.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2335 (length 60 amino acids):
MSQSNHDWGD MVLPGVYMIH RSTGSRMTSG TVPPDRAVNL ELVHLEIEET EDYIELLQKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -41.63 (PValue = 1.440081e-01)
Components of the Score Function:
Profile Score...............................................: -10.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2280 (length 60 amino acids):
MDLRMSVETL RAGDWFYKWT SKGDSVHRRW FWIDTKSYLL VWSNYETYSP HFCGSVRLDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -71.43 (PValue = 6.607116e-01)
Components of the Score Function:
Profile Score...............................................: -23.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.96
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2270 (length 60 amino acids):
MRCRHAAARP RGTFAATEGA SPLPATELCV HECSTGTAAV VESPPWHECG ESSGCGADGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -75.84 (PValue = 7.365259e-01)
Components of the Score Function:
Profile Score...............................................: -7.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.67
Term 4 Volume Compensation (-1, 1, 2).....................: -0.92
Term 5 Volume Compensation (-1, 2)........................: -0.52
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.61
Term 14 Hydrophobicity of Tail [26..end]...................: -2.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2230 (length 60 amino acids):
MAMPEQMLRG TPPPPPAKPS SQQEGDLVRL NREVRALGDL LRAYRFSYRP LPMCVPKMTP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -74.24 (PValue = 7.103189e-01)
Components of the Score Function:
Profile Score...............................................: -12.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.77
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.76
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2170 (length 60 amino acids):
MDSRRALVKR YIFGTNHDGK NCLHWLDDGS LVYPVGKTIV LQQPKSCTQR FLEAAYQSTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -64.47 (PValue = 5.248041e-01)
Components of the Score Function:
Profile Score...............................................: -11.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.67
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.37
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2160 (length 60 amino acids):
MRRTLQTANN AMGGGLPIHR DTMRKPRLVT EVGTWLYKKE TMQNFSKWCR ERQVRAYGNV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -75.27 (PValue = 7.273546e-01)
Components of the Score Function:
Profile Score...............................................: -15.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.18
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.2120 (length 60 amino acids):
MPNDTLQVKL SQDSLFFPLP FTNATIDNVV QVKNMLPVVQ GDPKANVISF KILSRVQNRY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -63.52 (PValue = 5.056143e-01)
Components of the Score Function:
Profile Score...............................................: -18.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.25
Term 4 Volume Compensation (-1, 1, 2).....................: -0.99
Term 5 Volume Compensation (-1, 2)........................: -0.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.69
Term 14 Hydrophobicity of Tail [26..end]...................: -1.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1945 (length 60 amino acids):
MLFGNEAPFH LKPIPYRGVR KHQAEVLQHP PGYQHPIIPL PPCSASEVTA VRPSASSTAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -39.68 (PValue = 1.245904e-01)
Components of the Score Function:
Profile Score...............................................: 3.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1880 (length 60 amino acids):
MTFNRPRGRD TFSAAFESRL RIVPLTQMSD LYGPIDVSLL TAVNADDPTS SEGNPLERKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -96.37 (PValue = 9.403147e-01)
Components of the Score Function:
Profile Score...............................................: -18.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -0.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.68
Term 14 Hydrophobicity of Tail [26..end]...................: -2.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -65.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1860 (length 60 amino acids):
MPGRLKAAPS EVAFTRRFIL SPHRRQPVHC HARHSPVRTP YPSYAQPSSG VAPGGSSSSH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -71.32 (PValue = 6.586234e-01)
Components of the Score Function:
Profile Score...............................................: 0.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.29
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1830 (length 60 amino acids):
MLRRSVVLWR RRAAGIVGLP NVGKSTLFNA LTCSQIAKTG NFPFCTIDAN TSKVPVVDPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -54.38 (PValue = 3.272714e-01)
Components of the Score Function:
Profile Score...............................................: -12.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.77
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.60
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1800 (length 60 amino acids):
MASRGEHIRL DKGALVKNHY EVVTSIGSGN FSKVYRVIDL DLSIKDQRRN PLAMKVIKKE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -81.77 (PValue = 8.205052e-01)
Components of the Score Function:
Profile Score...............................................: -27.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.26
Term 4 Volume Compensation (-1, 1, 2).....................: -2.04
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1700 (length 60 amino acids):
MTDVGMPSSQ SGPRSSHATV LQPSLPPRLV QVRHANPSAE SMMDLSINRR PFYDTETPPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -67.30 (PValue = 5.815559e-01)
Components of the Score Function:
Profile Score...............................................: -5.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.42
Term 4 Volume Compensation (-1, 1, 2).....................: -4.44
Term 5 Volume Compensation (-1, 2)........................: -2.12
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.38
Term 14 Hydrophobicity of Tail [26..end]...................: -3.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1530 (length 60 amino acids):
MSATPKQPST ATTSISSDEK WDHSLETLIR KSTIGFASGI LPGLLLARSP AARSAIIALC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -32.17 (PValue = 6.806046e-02)
Components of the Score Function:
Profile Score...............................................: -1.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.39
Term 4 Volume Compensation (-1, 1, 2).....................: -3.07
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.17
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1270 (length 60 amino acids):
MFKFDYKISY DEFVRTIYHH ARQYEIKVSD PHKQCVTVNA LITKAKDEES KRNYANAYYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -92.17 (PValue = 9.164304e-01)
Components of the Score Function:
Profile Score...............................................: -31.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.76
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1100 (length 60 amino acids):
MRSLLLRSSP RFAAAQVAPR AAYALSLHTP HRSFFVRELS TPATLESGDS SVAPSPARLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -30.79 (PValue = 6.044368e-02)
Components of the Score Function:
Profile Score...............................................: 6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.50
Term 14 Hydrophobicity of Tail [26..end]...................: -0.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1060 (length 60 amino acids):
MRCMSRVFLC AAASTANGAG AASKAAAAVT APPSTLPVFK TRPIYMDNQA TTPLDPRVLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -53.10 (PValue = 3.047603e-01)
Components of the Score Function:
Profile Score...............................................: -4.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.73
Term 4 Volume Compensation (-1, 1, 2).....................: -0.33
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0870 (length 60 amino acids):
MHRIIIIFHG SAVQLQRMPK EPQPSRPYVV PLSAPYAKPS GSLVPTASSS TAATAVARAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -35.70 (PValue = 9.117864e-02)
Components of the Score Function:
Profile Score...............................................: 4.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.75
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1910 (length 60 amino acids):
MMALTLDPRW NAMRRGIAGI GVCAVDGRGG AAAPGSCRLS LCSCLSPASS GGCGGADSAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -32.71 (PValue = 7.122930e-02)
Components of the Score Function:
Profile Score...............................................: 2.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1570 (length 60 amino acids):
MMALTLDPRW NAMRRGIAGI GVCAVDGRGG AAAPGSCRLS LCSCLSPASS GGCGGADSAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -32.71 (PValue = 7.122930e-02)
Components of the Score Function:
Profile Score...............................................: 2.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1550 (length 60 amino acids):
MPRPRTTSAY RLRRSTVPCV QSLGAFSHLI IATRTIVQSN VTGGVRSLLD QFETRTLITR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -60.87 (PValue = 4.520720e-01)
Components of the Score Function:
Profile Score...............................................: -8.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.51
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1470 (length 60 amino acids):
MRRRVGVGHV LQERQQQQRM ADLGAQITAE RVGQIEDQLE ELQAQLKALA QNHKSDITED
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -89.65 (PValue = 8.984948e-01)
Components of the Score Function:
Profile Score...............................................: -20.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.74
Term 4 Volume Compensation (-1, 1, 2).....................: -3.78
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.69
Term 14 Hydrophobicity of Tail [26..end]...................: -3.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1460 (length 60 amino acids):
MPACAGAALR CARRCSSTPS PNSVPNKEEA LSSLQTCLSA ESVQSSTPHS DDETAKLATS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -46.81 (PValue = 2.067803e-01)
Components of the Score Function:
Profile Score...............................................: 4.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1220 (length 60 amino acids):
MQGTNLPPEQ RWKKEEAPRA PLWARAAVII IEVIIWLVTF GTVKRVKALE VLFHYSPHWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 24 had the best score.
Total Score.................................................: -72.99 (PValue = 6.886296e-01)
Components of the Score Function:
Profile Score...............................................: -9.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.04
Term 4 Volume Compensation (-1, 1, 2).....................: -6.77
Term 5 Volume Compensation (-1, 2)........................: -2.81
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.21
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.12
Term 14 Hydrophobicity of Tail [26..end]...................: -2.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1155 (length 60 amino acids):
MHATRVCVHR MFPCLVQVQP GKYLLTVHAK PSARASAFAA PLTPVLTEAD LRIAAPPVEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -23.36 (PValue = 3.051765e-02)
Components of the Score Function:
Profile Score...............................................: -3.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1120 (length 60 amino acids):
MASVPFTEED LHELYTWVDE IPISRQKRNI ARDFADGCSV AEILKFFFPK LVDLHNYVPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -39.87 (PValue = 1.263252e-01)
Components of the Score Function:
Profile Score...............................................: -9.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.40
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.1080 (length 60 amino acids):
MNGTVCVHVQ QQRQQTSPCQ ALTHFRSRLT PRQLCRAVST ALPLFLPCTS ALPLPAVGVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -22.26 (PValue = 2.738349e-02)
Components of the Score Function:
Profile Score...............................................: 1.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -5.65
Term 9 Volume Limitation [3..8]...........................: -1.32
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0970 (length 60 amino acids):
MSHSFCRVGI AIYCLLQLIA FIFILVGTLI DQFRVQNVDA LSNDPCLTIW GFKDKCISLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -67.63 (PValue = 5.881397e-01)
Components of the Score Function:
Profile Score...............................................: -10.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.63
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.70
Term 14 Hydrophobicity of Tail [26..end]...................: -1.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0710 (length 60 amino acids):
MGSVLQTFED GLELTSILPA IKYPLGTHTI SKLSAHLEAS AGEVSAKELR QLASSISLSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -24.61 (PValue = 3.441956e-02)
Components of the Score Function:
Profile Score...............................................: -6.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.92
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0660 (length 60 amino acids):
MPPPLRKPSL GPQGQRTLRR SSSPAPPSSR SRSPSTSSNN SDNDFVYVLG HVKSTEEAVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -41.13 (PValue = 1.388531e-01)
Components of the Score Function:
Profile Score...............................................: -14.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.72
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0450 (length 60 amino acids):
MAGDSCSSPV VTATAVTTTA SFVSPRTPTS TPPPTTSRCF VRPLLVQRLH SRSDGPQQQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -73.45 (PValue = 6.967399e-01)
Components of the Score Function:
Profile Score...............................................: -10.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.43
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.78
Term 14 Hydrophobicity of Tail [26..end]...................: -4.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0400 (length 60 amino acids):
MVFYSLVLVM KPRPRKYTSQ ALREIAVNIY NHGGLIRKLS NEGILRPYSR FRDADNTAIT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -57.92 (PValue = 3.935677e-01)
Components of the Score Function:
Profile Score...............................................: -11.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.62
Term 14 Hydrophobicity of Tail [26..end]...................: -1.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0300 (length 60 amino acids):
MLSKKKAAKR SAISATVRRE HQAHEKLSQQ NAQLHTPHKK TAEASASSRG ADNFVNPKKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -71.41 (PValue = 6.602315e-01)
Components of the Score Function:
Profile Score...............................................: -4.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.14
Term 14 Hydrophobicity of Tail [26..end]...................: -3.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0140 (length 60 amino acids):
MRRSQGCFFR VAVLGAAGGI GQPLSLLLKN NKYVKELKLY DVKGGPGVAA DLSHICAPAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -55.33 (PValue = 3.446061e-01)
Components of the Score Function:
Profile Score...............................................: -1.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.27
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0090 (length 60 amino acids):
MTARAAVMPC LQRYARLSAS VLASPDDAET QAALSLLLQY LSLQSCNTSE VEALEQWCRK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 24 had the best score.
Total Score.................................................: -70.98 (PValue = 6.523044e-01)
Components of the Score Function:
Profile Score...............................................: -9.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.81
Term 14 Hydrophobicity of Tail [26..end]...................: -2.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.34.0010 (length 60 amino acids):
MPCFLSLVGT VALGVVFFKV ISFVKVNYLT SLNMKKRYGN AGDWAVVTGA SEGIGYAMAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -33.67 (PValue = 7.718379e-02)
Components of the Score Function:
Profile Score...............................................: 4.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0570 (length 60 amino acids):
MQTSEGGAHR QSAKASETGS GATVASVKAA QSPWQPSYAP GTNQLPEVDE ARRCSSIRKE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -83.17 (PValue = 8.370778e-01)
Components of the Score Function:
Profile Score...............................................: -5.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.12
Term 14 Hydrophobicity of Tail [26..end]...................: -3.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -65.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0480 (length 60 amino acids):
MSSPSRLSSA RSLAPHLSKS PHIKRHTPDT HTQAHPHTHI TMAGDKSSKR VKLRTKIARK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.91 (PValue = 5.737684e-01)
Components of the Score Function:
Profile Score...............................................: -24.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.34
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0460 (length 60 amino acids):
MSHSQSAKGS AVKVYTTPSL FKDYNKLTKD LLAKDFPTAN KWVLECKYKG PKDTFFINPK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -96.44 (PValue = 9.406645e-01)
Components of the Score Function:
Profile Score...............................................: -31.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.90
Term 4 Volume Compensation (-1, 1, 2).....................: -1.08
Term 5 Volume Compensation (-1, 2)........................: -0.29
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.06
Term 14 Hydrophobicity of Tail [26..end]...................: -2.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0370 (length 60 amino acids):
MISGGSVDCA HTLEEAEDHY GRGDRATARE LLQSIVTTDV AVDDGDAIRA KEQAVYRLAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -47.62 (PValue = 2.179926e-01)
Components of the Score Function:
Profile Score...............................................: -10.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.92
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0320 (length 60 amino acids):
MAVVYVRRDG RTALELRGKE MKLSDMTTFD GSSWYAQGQT AVMVSIHGPT IAKNDEYDTC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -95.08 (PValue = 9.336966e-01)
Components of the Score Function:
Profile Score...............................................: -12.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.87
Term 14 Hydrophobicity of Tail [26..end]...................: -5.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -32.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -70.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0155 (length 60 amino acids):
MPSRARTHTC EHMCVYSVPS FSPSTPFPLP VARDTSVYTR CKLPAISTYA CRHILFFLAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -17.54 (PValue = 1.682149e-02)
Components of the Score Function:
Profile Score...............................................: -9.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0150 (length 60 amino acids):
MAMEEAAQEV RRILCQNDVE ETLNYLSTVT RCIEDNQHDL RAVIGNSYRD LLGACDGVVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -56.37 (PValue = 3.639243e-01)
Components of the Score Function:
Profile Score...............................................: -22.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -17.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.02.0050 (length 60 amino acids):
MPTFYTRDQV AEHNKKKSGW LIINNGVYDV SDFYDDHPGG RDILLAHIGT DATEGFEAVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -61.35 (PValue = 4.617274e-01)
Components of the Score Function:
Profile Score...............................................: -21.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.51
Term 4 Volume Compensation (-1, 1, 2).....................: -2.31
Term 5 Volume Compensation (-1, 2)........................: -1.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1560 (length 60 amino acids):
MWALTCRPIQ NTEALQLMER YKAHNALQSN QWLLPRHLAC FAVRPLYPAQ LVLPTSSVIR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -34.32 (PValue = 8.146636e-02)
Components of the Score Function:
Profile Score...............................................: -5.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1540 (length 60 amino acids):
MPPASLTFEP PSVVAVFATH AVLCWEQPRT PHTTSFAEHM AWEYQIEYNC SCRVRQQPYC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -80.40 (PValue = 8.030822e-01)
Components of the Score Function:
Profile Score...............................................: -12.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.90
Term 14 Hydrophobicity of Tail [26..end]...................: -3.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1450 (length 60 amino acids):
MPRGHVGMSS IEARQRRESF MEKFNAEQTV QERQKRTVEW ELRGNERHEQ KDVLRYMDVI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -56.62 (PValue = 3.687982e-01)
Components of the Score Function:
Profile Score...............................................: -14.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.75
Term 4 Volume Compensation (-1, 1, 2).....................: -1.20
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1700 (length 60 amino acids):
MSRLVIDSGA CVRLWRFCPA PAPLTSNESL IRYASLGHGA PSEFRAHSGT KDMADLPFQW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -63.42 (PValue = 5.034880e-01)
Components of the Score Function:
Profile Score...............................................: 2.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.40
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1350 (length 60 amino acids):
MSDHADIDEA ARKRLRAEAP FVSPLPLPPP AAPLLPCDAS HNGESAEAAG HILVASAPPH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -23.97 (PValue = 3.237522e-02)
Components of the Score Function:
Profile Score...............................................: -16.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -3.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1200 (length 60 amino acids):
MKRIVAPRRW SAINRVEHPP LMPKQLLQSV CGGLRWLESK SLAEFLAKRA IEEGFPCTKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -42.01 (PValue = 1.480526e-01)
Components of the Score Function:
Profile Score...............................................: -5.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.17
Term 9 Volume Limitation [3..8]...........................: -2.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -4.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.23.1190 (length 60 amino acids):
MYPGEYVPAG HNTLSSLRDE LRSDLTAQSL KEAWMRVSGG MYFKSIDDYY ASVDGLDQEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -73.97 (PValue = 7.056185e-01)
Components of the Score Function:
Profile Score...............................................: -11.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.61
Term 14 Hydrophobicity of Tail [26..end]...................: -1.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0970 (length 60 amino acids):
MPVVASRDYR ASWEIPYDFH PRIHAYPGSR SAARPCMGAP SPTSEASDAA TAPRHQRVKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -65.36 (PValue = 5.427268e-01)
Components of the Score Function:
Profile Score...............................................: -1.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.08
Term 14 Hydrophobicity of Tail [26..end]...................: -4.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0960 (length 60 amino acids):
MSGETQQQQQ QPQGTTPRKV FFILGGPGSG KGTNCARLVE DFGYTHFSAG ELLREAARSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -54.40 (PValue = 3.277164e-01)
Components of the Score Function:
Profile Score...............................................: -11.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.47
Term 4 Volume Compensation (-1, 1, 2).....................: -1.22
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.21
Term 14 Hydrophobicity of Tail [26..end]...................: -1.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0930 (length 60 amino acids):
MYLSMISCAR RKLPAPTGTS SLCVCVCVCR YPRPAPHICR PTRDGERCRR NLIKRPHGEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -91.56 (PValue = 9.123682e-01)
Components of the Score Function:
Profile Score...............................................: -23.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.72
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.65
Term 14 Hydrophobicity of Tail [26..end]...................: -3.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0920 (length 60 amino acids):
MEQPPPEQWS SPSPVTMSGG VAPLPQPPLS GFNYRRNPAL MMAEVPTPPG TITIQDARAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -50.66 (PValue = 2.640778e-01)
Components of the Score Function:
Profile Score...............................................: -2.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.03
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.43
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0820 (length 60 amino acids):
MSCITSPPQP SSPPRMDAHT CVCIGITMPP AARQRKGARR SLTLPLLSLP WRKIRDQEGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -67.68 (PValue = 5.889967e-01)
Components of the Score Function:
Profile Score...............................................: -12.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -28.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0740 (length 60 amino acids):
MMALAATATV TASEVMESSI SDSGEASGSS KSRSSSVDSA RAVAAARAYD TAAIAIIPGL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -10.83 (PValue = 7.773750e-03)
Components of the Score Function:
Profile Score...............................................: -6.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.04.0690 (length 60 amino acids):
MRAVKSRNAG GLRSVRDVDS NRDAAAAPVH AKRAAAAASL TVAVHRSDGS DTHREKGVPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -62.90 (PValue = 4.929958e-01)
Components of the Score Function:
Profile Score...............................................: -1.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.40
Term 14 Hydrophobicity of Tail [26..end]...................: -3.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1310 (length 60 amino acids):
MTVGQQTGNV VGGADVLCAT PPAEQLGEED KGYVHPDTAA LFDASPFMRY IPIFGTAVVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -34.51 (PValue = 8.276769e-02)
Components of the Score Function:
Profile Score...............................................: -2.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -20.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1270 (length 60 amino acids):
MSFKEMRLAF EGSKNIYESS LLTFKGVDGY DVYNCSLLFQ YKGKHHLFGR FERREKSSDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -107.18 (PValue = 9.771652e-01)
Components of the Score Function:
Profile Score...............................................: -18.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.90
Term 4 Volume Compensation (-1, 1, 2).....................: -1.80
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.99
Term 14 Hydrophobicity of Tail [26..end]...................: -5.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -72.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1260 (length 60 amino acids):
MKQVKAAFEA NKRVYESVLL TFKGVDGYDV YNCSVPFSYK GKTHIYGRVE KRDIWAASHV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -72.14 (PValue = 6.736191e-01)
Components of the Score Function:
Profile Score...............................................: -23.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.41
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1130 (length 60 amino acids):
MSSSAPAAVE MRGCDEAGPR KMSHRTKHRK EVKRYHQRQQ NKHLREEAKA RDAQLFLFET
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -72.92 (PValue = 6.873682e-01)
Components of the Score Function:
Profile Score...............................................: -12.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.17
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.1060 (length 60 amino acids):
MKFHLHVVDG SAPARGGTAP FPSPPTATEA TQATAVMLFA HMTLRCGHLS DVLAVSASTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -38.95 (PValue = 1.177828e-01)
Components of the Score Function:
Profile Score...............................................: -17.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.54
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.86
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -5.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0850 (length 60 amino acids):
MSFEDVGVGF VQHYYNFFAN QRDQLAGIYR PNTLLTWQKE QVQGVDAIMA RFANLGFTEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -64.59 (PValue = 5.273432e-01)
Components of the Score Function:
Profile Score...............................................: -18.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.10.0710 (length 60 amino acids):
MSRLPSTASD NEPAHLTQME DERHRKTLIE GFMSVPEVEG DKGANNGDPS FQQKDQKVPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -75.43 (PValue = 7.299932e-01)
Components of the Score Function:
Profile Score...............................................: -6.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.72
Term 14 Hydrophobicity of Tail [26..end]...................: -4.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1080 (length 60 amino acids):
MITKAEASQW RLSDLEMRET VGTGTFGRVR LVKHKGTGQY AALKILKKQE ILRMKQVDHV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -73.92 (PValue = 7.048302e-01)
Components of the Score Function:
Profile Score...............................................: -23.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.81
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.16
Term 9 Volume Limitation [3..8]...........................: -2.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.36
Term 14 Hydrophobicity of Tail [26..end]...................: -3.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.1000 (length 60 amino acids):
MTTLASSSPP QYADGVAAAE VSGAVSSAAA LPASGSLSTN AVTRNFSDLH APTWFALLSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -30.25 (PValue = 5.762780e-02)
Components of the Score Function:
Profile Score...............................................: 1.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0980 (length 60 amino acids):
MVNRRIAKGR RLARKKRLKT AKKSSVDGSA ARAGAGKTAG KRKTAATRVR VVNGVSKKQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -77.18 (PValue = 7.574239e-01)
Components of the Score Function:
Profile Score...............................................: -11.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.07
Term 14 Hydrophobicity of Tail [26..end]...................: -3.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0360 (length 60 amino acids):
MTSPTRFTAT ALLVVALLVL TASSCFPDAY AAIRTAVAAA ASAPQGATGK GQSNNWAVIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -26.73 (PValue = 4.197355e-02)
Components of the Score Function:
Profile Score...............................................: 2.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.37
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.5610 (length 60 amino acids):
MQQMRICRDR WPICPLGGRD VSSSHKLSFS FVFSLILLAA ALIVFPTCRL FSANIHLVFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 23 had the best score.
Total Score.................................................: -14.49 (PValue = 1.200137e-02)
Components of the Score Function:
Profile Score...............................................: 11.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4640 (length 60 amino acids):
MSDGEVVFED ATGASSEKTP LKGDMLDAPP RKVTRSRAEW LRCVTVACVL LLIAPLYLWT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -19.30 (PValue = 2.026594e-02)
Components of the Score Function:
Profile Score...............................................: -11.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -1.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4450 (length 60 amino acids):
MLRRLVSCAS PLRLRGCGAA VVLGNGRFAS TANASAAPPI TTTKAPTYGT VPDIPNLNFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -48.76 (PValue = 2.346255e-01)
Components of the Score Function:
Profile Score...............................................: -8.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4400 (length 60 amino acids):
MSLKKKTFKQ RIRKNDMKQR HQIGFGLRKR MGAARRIRNR YDSVDDGTRP MEMIVSEIAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.69 (PValue = 2.336140e-01)
Components of the Score Function:
Profile Score...............................................: -7.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.97
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4360 (length 60 amino acids):
MLAAVAVPSS SSSTAPGTNT AVSDYFLQKI HELRATQKRT LDNFERLEAQ RNDLNRRVRH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -90.47 (PValue = 9.047118e-01)
Components of the Score Function:
Profile Score...............................................: -24.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -1.39
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.48
Term 14 Hydrophobicity of Tail [26..end]...................: -2.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.4350 (length 60 amino acids):
MGPVAASACS HMDDSRGSAR FPQPRTPEPQ RFQFRSLRWC PEAQTPTAQH DGGAPYAAEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -69.85 (PValue = 6.311740e-01)
Components of the Score Function:
Profile Score...............................................: -17.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3657 (length 60 amino acids):
MLQGLLCLLL LTTSAFAYPI VVVPVDWANV PNSTPEARNL NSPYLGECVC DVTRGICDPF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -55.81 (PValue = 3.534857e-01)
Components of the Score Function:
Profile Score...............................................: -6.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.98
Term 14 Hydrophobicity of Tail [26..end]...................: -2.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3460 (length 60 amino acids):
MLRLCARHLG DAKSASHVYE LRTYVVAPEK YDSFHQLSMK YMPQRPCIGI CQGCWTVQLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -61.57 (PValue = 4.661068e-01)
Components of the Score Function:
Profile Score...............................................: -9.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.3140 (length 60 amino acids):
MASVDTQWAI KSILQLGHHH LRHGAETTSS SSSCLVRPTS PPFRSASKAV QVTAMPRLMR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -47.70 (PValue = 2.191308e-01)
Components of the Score Function:
Profile Score...............................................: 1.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2830 (length 60 amino acids):
MNVVDDTVAA AGGDDDAIAE QQNMSFLMKL QELYCKTVLY EQLEQMMGHP ATQEESDGYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -68.70 (PValue = 6.090144e-01)
Components of the Score Function:
Profile Score...............................................: -16.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.43
Term 4 Volume Compensation (-1, 1, 2).....................: -3.14
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.20
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2720 (length 60 amino acids):
MYTPTQGDLV SVIQLLHNNG VEVSNSKAAY AQLKQYESNP AFCILLSTVF GADTNPVTDM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -57.74 (PValue = 3.900693e-01)
Components of the Score Function:
Profile Score...............................................: -6.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.03
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.69
Term 14 Hydrophobicity of Tail [26..end]...................: -3.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2650 (length 60 amino acids):
MSANCAGPAS TPDAKKARVE ADVITEADRV PAFPLPPTDA AAYEREHVHN VYSAIADHFS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -50.60 (PValue = 2.629654e-01)
Components of the Score Function:
Profile Score...............................................: -5.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2430 (length 60 amino acids):
MQDAGRALYT VTGQRVARSE LLKLIAFAQD AVAKQQQELQ NGQDQVSSQR RSVTTSAGSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.67 (PValue = 3.697360e-01)
Components of the Score Function:
Profile Score...............................................: -8.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -1.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.22
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2410 (length 60 amino acids):
MTVSLHDLIK EWEVVNAELY RASLESHQRY SFPASSHGRS NDSDCSAEEP SLSPPPLSST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -35.53 (PValue = 8.995249e-02)
Components of the Score Function:
Profile Score...............................................: 4.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2250 (length 60 amino acids):
MSSLQKINDI EAELARTQKN KATMAHICAL KARLAQLKRE LIASESKKGG GKGEGFDVQK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -65.51 (PValue = 5.458778e-01)
Components of the Score Function:
Profile Score...............................................: -14.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2100 (length 60 amino acids):
MLSEEEQATL LKYYSTVKLH ETQMDQLAQA YWAATREERG EIAKVYAHTF VDPTFVQRLI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -54.39 (PValue = 3.274330e-01)
Components of the Score Function:
Profile Score...............................................: -22.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2080 (length 60 amino acids):
MRITAATATA PVGAPGAKVR KGKAKTIRAV AAAGAVWRPQ SQLIFTSNAT SVTAPSNGEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -45.11 (PValue = 1.843128e-01)
Components of the Score Function:
Profile Score...............................................: 5.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2060 (length 60 amino acids):
MLGAQAVPSF LLALASSSSA PQCTQPQQLI ECRPHDTLVQ HSPYGPSRNT TYGWGNLFQP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -67.07 (PValue = 5.769343e-01)
Components of the Score Function:
Profile Score...............................................: -8.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -1.72
Term 5 Volume Compensation (-1, 2)........................: -1.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.21
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.2040 (length 60 amino acids):
MRFMDVALAA EAVVIITVIL TVPYTEIDWK AYMEEVEGFL AGELDYRNLK GGTGPLVYPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -59.78 (PValue = 4.301061e-01)
Components of the Score Function:
Profile Score...............................................: -12.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1990 (length 60 amino acids):
MRYTGISFLF VFISLIFSIH AFLSLRLPLH SQACRLTSTQ KPALLRFGKG SSSICRAARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -67.15 (PValue = 5.785788e-01)
Components of the Score Function:
Profile Score...............................................: -9.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1980 (length 60 amino acids):
MSQANMKCSA VGGRNLNGTP VERSTLLSDG KLSLESIMLQ FLCGEQLRLE YAMEIVQQAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -61.38 (PValue = 4.623586e-01)
Components of the Score Function:
Profile Score...............................................: -16.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.31
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1820 (length 60 amino acids):
MAGDFFMSCS TDESAFMPEI RVVVLGDAKV GKTALLRQYL HHEQPSRSTG HESTLLDSYT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -57.00 (PValue = 3.758763e-01)
Components of the Score Function:
Profile Score...............................................: -3.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1700 (length 60 amino acids):
MLSDNDLTFH IPSAGLRRMD AWTAPNPSVF SHLHLVGNPD WMSSFSASPQ VAAARPALAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -37.64 (PValue = 1.064642e-01)
Components of the Score Function:
Profile Score...............................................: 3.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1650 (length 60 amino acids):
MFADFESVML SNFTLDDCPR VGPFTYHNMD EDTLEEPLSL CSYRRAPQQT TERSPASCDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -84.22 (PValue = 8.486466e-01)
Components of the Score Function:
Profile Score...............................................: -8.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.81
Term 4 Volume Compensation (-1, 1, 2).....................: -3.87
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.90
Term 14 Hydrophobicity of Tail [26..end]...................: -2.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1635 (length 60 amino acids):
MVCYRCGGVG HQSRECTSAA DSAPCFRCGK PGHVARECVS TITAEEAPCF YCQKPGHRAR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -83.79 (PValue = 8.439245e-01)
Components of the Score Function:
Profile Score...............................................: -17.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -0.63
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.95
Term 14 Hydrophobicity of Tail [26..end]...................: -4.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1520 (length 60 amino acids):
MSGGNAGDAM IGRVCRNFPD TFAKDEATAR EQEKKYWISR VLGSGATGTV LCAKRVSDGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -53.10 (PValue = 3.047969e-01)
Components of the Score Function:
Profile Score...............................................: -1.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.58
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.80
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.1430 (length 60 amino acids):
MSTLKEVNGR LNTQPFVSGF SPSSEDARIF NEMFGSNVNV IQWVARMASY YQAERDEILN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -72.45 (PValue = 6.791329e-01)
Components of the Score Function:
Profile Score...............................................: -22.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.44
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.77
Term 14 Hydrophobicity of Tail [26..end]...................: -1.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0800 (length 60 amino acids):
MHTLLFLSAL GDPTTASEVG AEGVRRRVVF SEAHPPLLLT TIGTSGHTAL SKEHAEALAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -34.88 (PValue = 8.530571e-02)
Components of the Score Function:
Profile Score...............................................: 1.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0410 (length 60 amino acids):
MYSDGERKTV SELQREAEAT RKEIIEEAQR LERIKKATAK TQFSIDQLFR FFAREVETEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -76.00 (PValue = 7.391840e-01)
Components of the Score Function:
Profile Score...............................................: -20.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.76
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.59
Term 14 Hydrophobicity of Tail [26..end]...................: -2.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0400 (length 60 amino acids):
MTTVLNRRFD VLCHSGTCPS YLIDVLSLLV AHANDTELFK TELRKGDGGE FGAAATGAGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -50.97 (PValue = 2.690611e-01)
Components of the Score Function:
Profile Score...............................................: 4.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.75
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0390 (length 60 amino acids):
MSSKRTEGTA ADEERRRTSA ASSGSSSVSS TDSDEASSSV SDSSSSGSGS SSDSESSDSE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.04 (PValue = 3.959197e-01)
Components of the Score Function:
Profile Score...............................................: -2.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.68
Term 14 Hydrophobicity of Tail [26..end]...................: -4.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0380 (length 60 amino acids):
MEVVAPSALP SRDLFFFCSA LCTLHIAPIV AMADCDGDLS NVHPELLKLC ADPEDWREQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -113.28 (PValue = 9.880953e-01)
Components of the Score Function:
Profile Score...............................................: -19.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.23
Term 14 Hydrophobicity of Tail [26..end]...................: -6.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -44.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -81.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0240 (length 60 amino acids):
MLFDGDDDNL PEVPTIRSNT LMPLTTSDAQ AQRLQQLEAE YRASRAETAA FRPRAAHRCS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -68.93 (PValue = 6.134563e-01)
Components of the Score Function:
Profile Score...............................................: -9.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.23
Term 14 Hydrophobicity of Tail [26..end]...................: -3.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0220 (length 60 amino acids):
MQYSIIVPAY KECGNLEPLI RRVFAAVTEQ GFPTQNVEML IVDDNSRDGS KEVVDRLHEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -73.31 (PValue = 6.943373e-01)
Components of the Score Function:
Profile Score...............................................: -24.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.84
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0070 (length 60 amino acids):
MEDYKAKGND AFKAKRYQEA IDWYTKAIEL DPNGEASGAL YSNRAGSWQN LNNFEKAAAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -57.44 (PValue = 3.843587e-01)
Components of the Score Function:
Profile Score...............................................: -8.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.67
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0060 (length 60 amino acids):
MIPKQMAEPL VIGLDYGSDC ARAVLVRVRD GAELQSAVFS YPRWAKGEYC DPKRMQYRQH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -114.74 (PValue = 9.900116e-01)
Components of the Score Function:
Profile Score...............................................: -19.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.23
Term 14 Hydrophobicity of Tail [26..end]...................: -6.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -83.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0040 (length 60 amino acids):
MGNATIIKGN IVTTSKVLYG GCVIVVNDLI VSVCGNETVA RKYLVELEST HPGVGAATWY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -51.75 (PValue = 2.818427e-01)
Components of the Score Function:
Profile Score...............................................: -7.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -1.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.0010 (length 60 amino acids):
MQPSVCLCHF AGHLHTLGTP SATPALRGKY TIMREENNVP AEWAPRDTHR LDPLQLLPPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -49.56 (PValue = 2.467455e-01)
Components of the Score Function:
Profile Score...............................................: -12.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.72
Term 4 Volume Compensation (-1, 1, 2).....................: -0.38
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -1.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.91
Term 14 Hydrophobicity of Tail [26..end]...................: -0.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.18.0050 (length 60 amino acids):
MTAATDGGMS GVVKCAEWLH ELIPCWLDGD VSVHLEDALR EVATHLDGVS AVAEKGVHLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -49.49 (PValue = 2.456028e-01)
Components of the Score Function:
Profile Score...............................................: -8.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2710 (length 60 amino acids):
MPSQTIVVGP QADAHATTLA AALEHAAPGD TIVVSPGVFE ETVHLPFNVT ITAAPVPEDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -61.05 (PValue = 4.556848e-01)
Components of the Score Function:
Profile Score...............................................: -10.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.07
Term 14 Hydrophobicity of Tail [26..end]...................: -1.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2680 (length 60 amino acids):
MSLMPGYPVP RDQWVESAEA CAACSKRFTF FAFKENCPCC GRLFCSSCLS AQCTLFPTAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -45.94 (PValue = 1.951374e-01)
Components of the Score Function:
Profile Score...............................................: 6.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.53
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2620 (length 60 amino acids):
MPCQIGQNNW ILTDSPVCYV TPNLRLHQCS CPLTTCTPTA AGYGCHLTSS VMILSGVLVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -10.70 (PValue = 7.650360e-03)
Components of the Score Function:
Profile Score...............................................: 1.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.2600 (length 60 amino acids):
MERAAEVTLI RDAFPHFNFA ADAAASTALR RATDAFSMEN TDEVVRLVRQ LLEKMLQAEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -50.80 (PValue = 2.662694e-01)
Components of the Score Function:
Profile Score...............................................: -23.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1970 (length 60 amino acids):
MSLLSDRAVV EHQLQRQGGE VLANPTRIRS LLIAKNVSKT KLAHWVPLRE SKPVYVSAKY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -72.11 (PValue = 6.730942e-01)
Components of the Score Function:
Profile Score...............................................: -13.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.94
Term 4 Volume Compensation (-1, 1, 2).....................: -1.37
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.30
Term 14 Hydrophobicity of Tail [26..end]...................: -1.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1870 (length 60 amino acids):
MGGKAKPTKH TAGETARKNH LATTNMGGGS AGLADRKGGV AGHSKFICKV CMAQAPDLKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -41.44 (PValue = 1.420576e-01)
Components of the Score Function:
Profile Score...............................................: 1.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.63
Term 14 Hydrophobicity of Tail [26..end]...................: -1.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1290 (length 60 amino acids):
MAATAASTTE VKPSILQTTD ALLAVPSSET VWSAWYKESE DKFLEFKSFE LAPATGGPGN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -68.08 (PValue = 5.970292e-01)
Components of the Score Function:
Profile Score...............................................: -16.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.80
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1220 (length 60 amino acids):
MSKINATYSS GYYIAPDVDF RKLEEQQRQE QRGKRKHGGA DDGGDDNVKR QTFAIPFDLI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -30.24 (PValue = 5.757575e-02)
Components of the Score Function:
Profile Score...............................................: -4.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.49
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.1070 (length 60 amino acids):
MSARPSVSVY SASSDSVVGT CPLPAVFTAP IRSDIVKFVH TNMAKNSRQA YAVNRLSGMN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.78 (PValue = 1.929323e-01)
Components of the Score Function:
Profile Score...............................................: -2.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0820 (length 60 amino acids):
MALRAKSALC LVAVFALLLA TTVSGLYAKP SDFPLLGKSF VAEVNSKAKG QWTASADNGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -74.68 (PValue = 7.175741e-01)
Components of the Score Function:
Profile Score...............................................: -22.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.52
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0810 (length 60 amino acids):
MFSASSSPAL PVTLGHGYAA AVRQTSTTSA VGRSISRIVV VGATAVTLGV SAVLGGSLLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -29.22 (PValue = 5.260823e-02)
Components of the Score Function:
Profile Score...............................................: -7.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.69
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.03
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -17.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.29.0750 (length 60 amino acids):
MPSASTSASS PGKAVAVPQL GGQLRSSKHV LERLTSSHLD HLVTSRRSGD TVLRESLAAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -33.96 (PValue = 7.909609e-02)
Components of the Score Function:
Profile Score...............................................: 1.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -2.19
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.14
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6800 (length 60 amino acids):
MEDAELSELV KRFQSLQREQ VSNQITERNA VEIVNTLIKK NLIDILFTTD AKEYLTWDEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -69.49 (PValue = 6.242033e-01)
Components of the Score Function:
Profile Score...............................................: -32.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.07
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.74
Term 9 Volume Limitation [3..8]...........................: -0.63
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.01
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6740 (length 60 amino acids):
MASDPCTSSS PSLAAHFPER TGGPARRPQT PADATWTLHG LLLTDLWEEP LHTCSRTRDR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -77.98 (PValue = 7.694535e-01)
Components of the Score Function:
Profile Score...............................................: -7.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.03
Term 9 Volume Limitation [3..8]...........................: -0.86
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.73
Term 14 Hydrophobicity of Tail [26..end]...................: -5.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6710 (length 60 amino acids):
MLWVDRYRPK TLKDVELYPE LKEVLTRLSK AQDLPHLLFY GPSGSGKKTR AMAMLHEIYG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -46.36 (PValue = 2.006529e-01)
Components of the Score Function:
Profile Score...............................................: -6.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6520 (length 60 amino acids):
MSKHSSSASG SSHSRTIGEE GDDCMSPPSE EEAALDDEAV AWVPDEIEFI AARRRLAIVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -52.44 (PValue = 2.934209e-01)
Components of the Score Function:
Profile Score...............................................: -12.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6340 (length 60 amino acids):
MSSGNNADDW GLLSVADIID SVVATDDHEA NGSTDVPFAV SDEASVPSFL LEAPLVENLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -30.47 (PValue = 5.877499e-02)
Components of the Score Function:
Profile Score...............................................: -2.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.37
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6230 (length 60 amino acids):
MGILDFLMRI RPTSRPAGIL ILGLDNAGKT SILRQLSDED ISHVASTQGF QIKKLVTGGI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -42.70 (PValue = 1.556633e-01)
Components of the Score Function:
Profile Score...............................................: -3.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.28
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.36.6080 (length 60 amino acids):
MMILPHAEEV ELRRGSSPAT ITSTTGRVNR VAVDTSSEEN QEAVSQDRLE GRDDAGKSPT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -71.93 (PValue = 6.697695e-01)
Components of the Score Function:
Profile Score...............................................: -16.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.39
Term 4 Volume Compensation (-1, 1, 2).....................: -0.63
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.07
Term 14 Hydrophobicity of Tail [26..end]...................: -3.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0570 (length 60 amino acids):
MCRTLLGIAV AFALVCCVVG PGAAQGHPER ADSEEPRCGF DELEAHTIGT RVSGISRVEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -51.29 (PValue = 2.741528e-01)
Components of the Score Function:
Profile Score...............................................: -15.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -1.39
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.65
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0470 (length 60 amino acids):
MQSCFAACSQ VVCVAEDTAV AFYAPKSLRK FRVERLNGSR VCGMYVQSTS SAKAVLHVID
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -32.04 (PValue = 6.730058e-02)
Components of the Score Function:
Profile Score...............................................: -3.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.72
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0410 (length 60 amino acids):
MSRHIHATRH GAVKCPLCDT YIVPRGFFAS LTKLIERHRD RQPSAPEASV PPPHSSPSTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -48.29 (PValue = 2.277192e-01)
Components of the Score Function:
Profile Score...............................................: 0.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.19
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.32
Term 14 Hydrophobicity of Tail [26..end]...................: -3.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.1480 (length 60 amino acids):
MSKADENGNE LMEIEEVAVS DGGAARFAAV DVKSGEERFN VIWQDSGKLM RFDEGENQWK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -90.09 (PValue = 9.018896e-01)
Components of the Score Function:
Profile Score...............................................: -8.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -17.17
Term 14 Hydrophobicity of Tail [26..end]...................: -5.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0940 (length 60 amino acids):
MSVRSGQFNY DAVARESPVG FTKITEGTTA VLEPPPKKKT CTSSAAPAPA SNLSDEEADN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -63.54 (PValue = 5.059463e-01)
Components of the Score Function:
Profile Score...............................................: -4.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0890 (length 60 amino acids):
MFKQRDNEYH PPMTVDPSGG GVTTSAGVFG EVGMGNVASP FLDGPAAVAG SRKRGRDIRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -70.77 (PValue = 6.484566e-01)
Components of the Score Function:
Profile Score...............................................: -8.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.67
Term 14 Hydrophobicity of Tail [26..end]...................: -3.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0770 (length 60 amino acids):
MFCRDTLCDT TPAVTDFLNG LSAVASKSPC SGDGALSDGH NAQSRMPVMG HVFLTGLLCV
Best predicted site is shown in red.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
Potential GPI-modification site was found.
Quality of the site ............... : S
Sequence position of the omega-site : 41
Score of the best site ............ : -4.75 (PValue = 3.464065e-03)
Best Site
Total Score.................................................: -4.75
Components of the Score Function:
Profile Score...............................................: 1.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.80
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.06
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0720 (length 60 amino acids):
MSSASIVALS LSLSFSLGLL RSLGSARHIR YGHPHTNTSA YGGRHPRMQV MAAAARTYRH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -71.62 (PValue = 6.641587e-01)
Components of the Score Function:
Profile Score...............................................: -17.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.36
Term 14 Hydrophobicity of Tail [26..end]...................: -2.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0560 (length 60 amino acids):
MGVDLTGISK KSRVIRHHTY STNPYIKLLI KLYKFLAKRT SSGFNKVVYQ RLIKSRSNRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -57.97 (PValue = 3.945757e-01)
Components of the Score Function:
Profile Score...............................................: -6.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.54
Term 14 Hydrophobicity of Tail [26..end]...................: -2.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0520 (length 60 amino acids):
MPSGPKNNKY TNRHSEEARL RDEERRIDSR AAREAAKEDA RWSETDPKVL KKMDKKREME
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -133.89 (PValue = 9.997664e-01)
Components of the Score Function:
Profile Score...............................................: -28.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.64
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -20.61
Term 14 Hydrophobicity of Tail [26..end]...................: -6.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -89.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0420 (length 60 amino acids):
MLQRLSHRSV LGYHGAPQVA ALRCSLRFGT NIGGSYYQES DTAGTHQMNN DIRLGLVIKP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -20.22 (PValue = 2.228853e-02)
Components of the Score Function:
Profile Score...............................................: -7.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.78
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0390 (length 60 amino acids):
MREAICIHIG QAGCQVGNAC WELFCLEHGI QPDGSMPSDK CIGVEDDAFN TFFSETGAGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.88 (PValue = 5.532048e-01)
Components of the Score Function:
Profile Score...............................................: -13.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0370 (length 60 amino acids):
MREAICIHIG QAGCQVGNAC WELFCLEHGI QPDGSMPSDK CIGVEDDAFN TFFSETGAGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.88 (PValue = 5.532048e-01)
Components of the Score Function:
Profile Score...............................................: -13.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.38
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.13.0220 (length 60 amino acids):
MSSISRASTT TKAGGSASTR KFKLVLLGES GVGKSSVVQR LMKNAFSEKL NSTVGASFFR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -59.13 (PValue = 4.172367e-01)
Components of the Score Function:
Profile Score...............................................: -5.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -1.37
Term 5 Volume Compensation (-1, 2)........................: -2.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.30
Term 14 Hydrophobicity of Tail [26..end]...................: -1.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1350 (length 60 amino acids):
MRRSEDGKVD VAVRRCRAWS APAAPLSHIC GSRNASSVRA AAGAIAGDHT HLPLPPTIYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -31.43 (PValue = 6.388670e-02)
Components of the Score Function:
Profile Score...............................................: -2.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.50
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1340 (length 60 amino acids):
MAPDATGLQP GCTYRVGLLE YTLEKAWFCQ FCVGILICVS NGACFCFSIF SPFMKGEGFR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -57.58 (PValue = 3.870927e-01)
Components of the Score Function:
Profile Score...............................................: -7.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.48
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.88
Term 14 Hydrophobicity of Tail [26..end]...................: -3.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1280 (length 60 amino acids):
MFCIAPPYTS PHTTASAHLS LLLLLFSTRM MTKLPQSCAS WRLIDIGLNL TDHMYKGVYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -69.70 (PValue = 6.282975e-01)
Components of the Score Function:
Profile Score...............................................: -34.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.74
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.82
Term 14 Hydrophobicity of Tail [26..end]...................: -3.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1250 (length 60 amino acids):
MRATEAQRRS ETSTELSSDY SSFCFQLVVT VKRMLILQSR DPLSLACELI TPIIFLVSSI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -15.23 (PValue = 1.305483e-02)
Components of the Score Function:
Profile Score...............................................: -2.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.74
Term 4 Volume Compensation (-1, 1, 2).....................: -3.57
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.73
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.05
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1190 (length 60 amino acids):
MTMMSVLANA LRTIASAERR GKRQVLIRPS SKVVVKFLQV MQKHGYIGEF EIIDDHRAGK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -92.98 (PValue = 9.215908e-01)
Components of the Score Function:
Profile Score...............................................: -26.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.1160 (length 60 amino acids):
MRLKNTALCC AFAWSPAVLG NPPLLATASY SGAMDENFSS DAFLEIRLVD VKVTDETELP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -30.05 (PValue = 5.663998e-02)
Components of the Score Function:
Profile Score...............................................: -9.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.70
Term 14 Hydrophobicity of Tail [26..end]...................: -1.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0500 (length 60 amino acids):
MLRSTLTRRS GFSVRELYPY GVPRRTFPYR EHQKQISLAP TAGGFYVTKH ALGWPFQIPF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -49.56 (PValue = 2.467676e-01)
Components of the Score Function:
Profile Score...............................................: -5.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.67
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0440 (length 60 amino acids):
MQVDLRRRGL QSFDPAEFAN TDEHLHLLLQ VRQLDLSYNS LYTIRGLEGL THLTVLNIAH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -32.63 (PValue = 7.076391e-02)
Components of the Score Function:
Profile Score...............................................: -6.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.00
Term 4 Volume Compensation (-1, 1, 2).....................: -3.41
Term 5 Volume Compensation (-1, 2)........................: -5.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.34
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0180 (length 60 amino acids):
MTTSASLFKK FTLENVAQIA SSSHKEQKEV REELAEQYPA LEAYWEEILP KKSDIFIIRC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.43 (PValue = 5.442799e-01)
Components of the Score Function:
Profile Score...............................................: -21.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.11.0150 (length 60 amino acids):
MDLDDIDRWR AGGSSRDHYR SRYAPQYSRK WNDAYQSTYD PPPPRRYFND DPPSPKLPSR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -87.16 (PValue = 8.776523e-01)
Components of the Score Function:
Profile Score...............................................: -13.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.01
Term 4 Volume Compensation (-1, 1, 2).....................: -2.84
Term 5 Volume Compensation (-1, 2)........................: -2.72
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.03
Term 14 Hydrophobicity of Tail [26..end]...................: -2.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.2170 (length 60 amino acids):
MINFIQPGGG SSTKSISVTI PSDGELIITV PSNEPKCSAS IKLEPSTGAT DSRVDVAGSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -47.81 (PValue = 2.208092e-01)
Components of the Score Function:
Profile Score...............................................: -3.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1810 (length 60 amino acids):
MRSSGDDIFR APESGEKDLV DKIKNRRKKF ELYQSDSHKM KSLMMNSAGI RSDLVTSNGM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -54.14 (PValue = 3.230086e-01)
Components of the Score Function:
Profile Score...............................................: -9.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.91
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1800 (length 60 amino acids):
MLSQALLSAV ERDLAVARQL AHFHVDLYAS EGDSDENGDF IGPFRHYPPL SSDLRSSQGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -62.40 (PValue = 4.828395e-01)
Components of the Score Function:
Profile Score...............................................: -16.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1740 (length 60 amino acids):
MRSFSILSRG GFSSGGPAAA AMAVAAGAPA SATIGYSACA MRWQSSRPYS RSSGGGRGSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -67.05 (PValue = 5.767211e-01)
Components of the Score Function:
Profile Score...............................................: -7.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.35
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.85
Term 14 Hydrophobicity of Tail [26..end]...................: -1.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1600 (length 60 amino acids):
MRSPYIRFPS PSLAEEALRL EWVFGLNSDY KAGIHNLSIG GGGVSGRGEN QQQLAQQQRR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -85.11 (PValue = 8.579288e-01)
Components of the Score Function:
Profile Score...............................................: -11.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.97
Term 14 Hydrophobicity of Tail [26..end]...................: -2.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -61.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1580 (length 60 amino acids):
MTTVSEKYQP TGKEVPFGGG RFLLSHRLGN GSFGDIFEGY DKKSHRIVAV KLERKKARYP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -90.53 (PValue = 9.051085e-01)
Components of the Score Function:
Profile Score...............................................: -21.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.76
Term 14 Hydrophobicity of Tail [26..end]...................: -5.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -32.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1520 (length 60 amino acids):
MNPSSKRHAY EPLPQQQQQH PTNPPAAYQH RRVSTGTGRD SPALPQLSPN SMPAMTNIAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -51.68 (PValue = 2.806343e-01)
Components of the Score Function:
Profile Score...............................................: -5.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.42
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.89
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1280 (length 60 amino acids):
MRCVCARLAL LRISCLPSWT SPALMWLYRM SACVHVRVSL SVYPSPPPLP FRGISLRLPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -40.06 (PValue = 1.281351e-01)
Components of the Score Function:
Profile Score...............................................: -8.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.90
Term 4 Volume Compensation (-1, 1, 2).....................: -1.21
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.51
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.1260 (length 60 amino acids):
MCVRLLSPSL HRYTPPLPSL PHLSCSLYYL HCAVGCPFET ASRARWSAAV CLPRSSISSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.60 (PValue = 4.069072e-01)
Components of the Score Function:
Profile Score...............................................: -2.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.64
Term 14 Hydrophobicity of Tail [26..end]...................: -2.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0820 (length 60 amino acids):
MTTMVKKNDV PIDVTWEDQR NICVFSRLHR RAQTLNRRLK LLRDDIEKLD DASTEAMICD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -91.09 (PValue = 9.091375e-01)
Components of the Score Function:
Profile Score...............................................: -22.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.40
Term 4 Volume Compensation (-1, 1, 2).....................: -4.37
Term 5 Volume Compensation (-1, 2)........................: -5.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.45
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -52.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0470 (length 60 amino acids):
MCAPTSVAGA VITLAAAVLL LLVGAAVEPA NAARAAVAGS ACGSLTHVYY LPDGQDFRGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -50.59 (PValue = 2.629277e-01)
Components of the Score Function:
Profile Score...............................................: -5.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.24
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.43
Term 14 Hydrophobicity of Tail [26..end]...................: -3.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0390 (length 60 amino acids):
MLVGSLCSLP LRCRSRNGVP HSLFSFPIRS SPLPLSLQMG SLGGAPYVAR VQQAATAADA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -48.10 (PValue = 2.249452e-01)
Components of the Score Function:
Profile Score...............................................: -5.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.37
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.28
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0230 (length 60 amino acids):
MQSAVGGSHP FTQEEESRLG LLQQRADGGG SLTEAESLEL SQLKRRHHTF IEEGKQLLRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.06 (PValue = 5.367166e-01)
Components of the Score Function:
Profile Score...............................................: -19.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.52
Term 4 Volume Compensation (-1, 1, 2).....................: -4.57
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.92
Term 14 Hydrophobicity of Tail [26..end]...................: -0.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0210 (length 60 amino acids):
MNTDDAREML AGSLGGASAT VVEYPMDTIK VRLQDDGKRY GGVLQCIRAI AKEEGVVNGF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -74.61 (PValue = 7.164577e-01)
Components of the Score Function:
Profile Score...............................................: -13.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.50
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.27
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0160 (length 60 amino acids):
MADAADTLLL SLEVEAAAAR NAELSQTIEM LQDEVLRLRR ANASLLACDA RHCPKVSLQP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -53.62 (PValue = 3.137792e-01)
Components of the Score Function:
Profile Score...............................................: -6.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.52
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.01
Term 14 Hydrophobicity of Tail [26..end]...................: -1.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.25.0070 (length 60 amino acids):
MRRGGTVVFQ RHRVSGGISR ANEMSAFARL RGGQQKTETD WVPTLLLSGE TPPPIARPAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -48.18 (PValue = 2.260984e-01)
Components of the Score Function:
Profile Score...............................................: -13.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.80
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.49
Term 14 Hydrophobicity of Tail [26..end]...................: -2.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3800 (length 60 amino acids):
MNARQTQVAC VTVVIGGLLG ALSYAAYRQL SQNSAASPDR NAHVPGSPVQ PPAAAAGAQA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -37.69 (PValue = 1.068507e-01)
Components of the Score Function:
Profile Score...............................................: 2.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3548 (length 60 amino acids):
MTEPTALVLV RRFLCIQGAA RTRARGRLTM NYAPLWRDSP PLPSPPPASH TCYCLHRTRF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -63.63 (PValue = 5.077541e-01)
Components of the Score Function:
Profile Score...............................................: -10.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.83
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.79
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3542 (length 60 amino acids):
MDAPVNVFLR FGLSHSERLN HLLERVGTAQ AAFRIVGPRQ QEGVARTPAH PHDGADCARV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.74 (PValue = 4.493134e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3470 (length 60 amino acids):
MDLAAADLQN YQLARQLHML PQLYDVFVSQ VMCYPMFYQS LHPAVRQLAR VVLLSLNRRF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -45.23 (PValue = 1.859413e-01)
Components of the Score Function:
Profile Score...............................................: -24.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.75
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.39
Term 14 Hydrophobicity of Tail [26..end]...................: -0.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3410 (length 60 amino acids):
MMFASVASVS SNGVHAAASG SAQGVASPTD ATTASTTAGA PSEDADGQPS EVDAAVDHPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -70.23 (PValue = 6.383719e-01)
Components of the Score Function:
Profile Score...............................................: -14.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3400 (length 60 amino acids):
MAFLLRSRVA AAVLPLILTI LVGCVLYSGS ATVGARNDRL PQPSWSRTCT SPYEVCSTIE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -55.35 (PValue = 3.449729e-01)
Components of the Score Function:
Profile Score...............................................: -8.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3390 (length 60 amino acids):
MDVGREGHSG LYTMHFSTVF PVEKSAQEKT NSTATNSSSS SPPPAPAPLD GGKSSASGSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -52.14 (PValue = 2.882314e-01)
Components of the Score Function:
Profile Score...............................................: 3.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.35
Term 14 Hydrophobicity of Tail [26..end]...................: -2.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3380 (length 60 amino acids):
MHLMVRWHFP HLRACADAPP LPRPADGISS GDDNASVISC SLDLHHVLFC ATLGCEAALC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -24.60 (PValue = 3.436482e-02)
Components of the Score Function:
Profile Score...............................................: -2.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.54
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3370 (length 60 amino acids):
MSAAYGNAGT SGTFDTPSAT LRRREADAAT AAWFHELVKE VEEAGDAEVN RARAPLFEKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.18 (PValue = 4.381713e-01)
Components of the Score Function:
Profile Score...............................................: -8.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.59
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.25
Term 14 Hydrophobicity of Tail [26..end]...................: -1.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.3130 (length 60 amino acids):
MSHCKFEHPR HGHLGFLPRK RSRQIRGRAR AFPKDDATQK PHLTSFMVFK AGMTHIVRDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.94 (PValue = 2.373680e-01)
Components of the Score Function:
Profile Score...............................................: -0.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.64
Term 4 Volume Compensation (-1, 1, 2).....................: -4.72
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.36
Term 14 Hydrophobicity of Tail [26..end]...................: -1.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2470 (length 60 amino acids):
MALPDDRPAL CVRTHKNKSK MARRARPVAE PSVLGPLRLI MVVDPLRVHR SQQQLSAALV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -49.57 (PValue = 2.468515e-01)
Components of the Score Function:
Profile Score...............................................: -5.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.38
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.2000 (length 60 amino acids):
MRIHSTFLLA PPQRHQRCCL LASVALLASL LLALPAVLAV TPPQGKPIRP LHGAGYEHLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -77.99 (PValue = 7.695754e-01)
Components of the Score Function:
Profile Score...............................................: -16.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.42
Term 4 Volume Compensation (-1, 1, 2).....................: -1.89
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -6.74
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1990 (length 60 amino acids):
MADQAPPGVN MPKKRDPRLR QMQAPQQQKF FDSADYEVRK QQQQQQPSHP SQQQQQQPSH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -102.90 (PValue = 9.658833e-01)
Components of the Score Function:
Profile Score...............................................: -12.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.07
Term 4 Volume Compensation (-1, 1, 2).....................: -1.44
Term 5 Volume Compensation (-1, 2)........................: -0.19
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -17.87
Term 14 Hydrophobicity of Tail [26..end]...................: -5.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -74.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1970 (length 60 amino acids):
MGKGDARTRS GRGRGRGRGG GSGGVCSTSG FHNNEPPAHP CSVPLAMWDF EQCDPNACSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -81.26 (PValue = 8.141110e-01)
Components of the Score Function:
Profile Score...............................................: -13.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.53
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.68
Term 14 Hydrophobicity of Tail [26..end]...................: -3.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1630 (length 60 amino acids):
MHISNTTFLE MTSSASSAMV EITVQDPATH HERPFLCALG PLRTHMRYFE PLIQRQINEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -59.56 (PValue = 4.259164e-01)
Components of the Score Function:
Profile Score...............................................: -8.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.65
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1620 (length 60 amino acids):
MGGFVTPHMQ GFNGLFRQQW QDFHVTEMAV EDGSSPKTCE EAALVVADKD GAHQAVKHLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -53.24 (PValue = 3.071753e-01)
Components of the Score Function:
Profile Score...............................................: -13.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1470 (length 60 amino acids):
MAELQQKHTE NMQTVDEARS KALRGEIDEL SRETGNAAKA AKEKLDAMSK NTAKLKSVPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -59.84 (PValue = 4.313122e-01)
Components of the Score Function:
Profile Score...............................................: -14.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1310 (length 60 amino acids):
MRAARDDAED MRRAKAQAKQ QRWQERQERS KDSREEIDKL QLRCADMHRE LKDIAESNEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.34 (PValue = 6.403287e-01)
Components of the Score Function:
Profile Score...............................................: -12.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.42
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -2.19
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.85
Term 14 Hydrophobicity of Tail [26..end]...................: -2.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1050 (length 60 amino acids):
MAADGTCTRV SEAPAYASGC HSPSPSTHLR GGTNGGRVLQ QGQPGPFTDA YGHADSGPAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -50.37 (PValue = 2.593087e-01)
Components of the Score Function:
Profile Score...............................................: -4.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.1020 (length 60 amino acids):
MDKKTALAQL RQSKFAYERG LERQEAERRA KLHRFLDQHK HASQWATSLA ALVDAVRHGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -44.68 (PValue = 1.789613e-01)
Components of the Score Function:
Profile Score...............................................: -14.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.33
Term 4 Volume Compensation (-1, 1, 2).....................: -4.29
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.11
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0980 (length 60 amino acids):
MSRCTTKLSG GTARANLVDH GVYVKPMSLN PFLGAVHDGT STGYFQGYSA KPMHWLYRFR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -71.88 (PValue = 6.688304e-01)
Components of the Score Function:
Profile Score...............................................: -10.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.50
Term 14 Hydrophobicity of Tail [26..end]...................: -2.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -49.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0910 (length 60 amino acids):
MMPRSDGEAA DGSGTVGSTH SSGHQNRVCV APQNPARSLT IMSSSTNVFS LVAATPDVNI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -33.72 (PValue = 7.750596e-02)
Components of the Score Function:
Profile Score...............................................: -11.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.23
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.28.0690 (length 60 amino acids):
MSVDTIIEQL LEVRGAKPGK QVQLAENDVK QLAIRTREIL LSQPPLLELE APIKICGDIH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -56.65 (PValue = 3.693230e-01)
Components of the Score Function:
Profile Score...............................................: -12.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.74
Term 4 Volume Compensation (-1, 1, 2).....................: -1.19
Term 5 Volume Compensation (-1, 2)........................: -0.97
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -1.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0040 (length 60 amino acids):
MMSHRRGGHA ALVSLLLPLT SHRFCVSPSH VLSIASCAFP CTHSCCVQQG VHPSHLPACL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -44.20 (PValue = 1.730833e-01)
Components of the Score Function:
Profile Score...............................................: -5.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -1.34
Term 5 Volume Compensation (-1, 2)........................: -1.06
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0010 (length 60 amino acids):
MLSISAVQRR YRLFHPVHQT VPFHFNPVQS IFPLIYENNL LAKPRLSWKD YEGRKEFDAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -105.44 (PValue = 9.730016e-01)
Components of the Score Function:
Profile Score...............................................: -35.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.47
Term 14 Hydrophobicity of Tail [26..end]...................: -3.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.0005 (length 60 amino acids):
MIFIASLLFH PSLRFLARKL HRRLPAFLLA AFTPRLRGKA PMTTRVELRK VQVVDPNPSK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -70.32 (PValue = 6.400188e-01)
Components of the Score Function:
Profile Score...............................................: -23.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.51
Term 4 Volume Compensation (-1, 1, 2).....................: -3.27
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.17
Term 14 Hydrophobicity of Tail [26..end]...................: -2.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1400 (length 60 amino acids):
MSRVLTVLLT YDDPECGGAA DALVEHLERD AVAVEGHCQL SVKPIQVLQN GSHRDALYGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -82.24 (PValue = 8.261164e-01)
Components of the Score Function:
Profile Score...............................................: -21.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.32
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1210 (length 60 amino acids):
MSSSAEEKEA KKQEELRLAG SDSEGVRAAV KAQRELKKKR DALRKVQKKI RSGGSDAEVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -80.92 (PValue = 8.097504e-01)
Components of the Score Function:
Profile Score...............................................: -11.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.18
Term 4 Volume Compensation (-1, 1, 2).....................: -3.02
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.13
Term 14 Hydrophobicity of Tail [26..end]...................: -1.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.1125 (length 60 amino acids):
VVRLRKGGAC VSVVSPRHAL FACARSSPAR VGFDADEDQI RHPPRVAHAR RRRVVAEQPL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -73.73 (PValue = 7.014922e-01)
Components of the Score Function:
Profile Score...............................................: -20.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0800 (length 60 amino acids):
MGAHLRDVLL ASLQRDVEKH QRVAQRNATP PGFVLKVHGV QLQSSVAAKD RKRHRDRADH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -91.45 (PValue = 9.116430e-01)
Components of the Score Function:
Profile Score...............................................: -10.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -17.80
Term 14 Hydrophobicity of Tail [26..end]...................: -5.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -68.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0790 (length 60 amino acids):
MSHPSFRDTQ RMTRERADAS VRTSSNGHGG PASVLVSDVP QVRESCAKQR HVATHQQRHY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -108.93 (PValue = 9.808377e-01)
Components of the Score Function:
Profile Score...............................................: -16.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.17
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -14.47
Term 14 Hydrophobicity of Tail [26..end]...................: -4.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -24.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -76.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0700 (length 60 amino acids):
MQNSNSSYPS QKPYRGRGIT DGSNMGTPHS TYSQQNPPTS PLVFAAPCGG TPPQQQDPLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -39.24 (PValue = 1.204998e-01)
Components of the Score Function:
Profile Score...............................................: 5.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0630 (length 60 amino acids):
MLRFPKQVRG GHGTCRVALC SSCRGVALTP QRMQLQHRDR IIGSHGAGLV NHQSMATMEI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -65.21 (PValue = 5.397916e-01)
Components of the Score Function:
Profile Score...............................................: -6.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.50
Term 14 Hydrophobicity of Tail [26..end]...................: -2.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0510 (length 60 amino acids):
MSSPFTEVPD SNTLFKDTEF IASNQDVADQ WVSIRDLYPS GVNQPLLPEV FSREQFGQGN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -81.86 (PValue = 8.215378e-01)
Components of the Score Function:
Profile Score...............................................: -12.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.49
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.17
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.93
Term 14 Hydrophobicity of Tail [26..end]...................: -3.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0450 (length 60 amino acids):
MGKGARSKRS TRPYAKRQHV LESKAQEVDP ALLERYRNTQ QPIRKSQLFT EILKQKKDTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -106.80 (PValue = 9.763107e-01)
Components of the Score Function:
Profile Score...............................................: -13.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.76
Term 4 Volume Compensation (-1, 1, 2).....................: -4.87
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -1.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -76.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0410 (length 60 amino acids):
MQTDRRWQSD GTGQQDLYAV LGVRPDATQD EIKAAYKKSA LEYHPDRNHQ PGAEEKFKSI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -73.96 (PValue = 7.054316e-01)
Components of the Score Function:
Profile Score...............................................: -9.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.38
Term 4 Volume Compensation (-1, 1, 2).....................: -5.92
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -60.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0400 (length 60 amino acids):
MNSTTTAQFE AAWCEVERQQ RERLSASTEL LNVEVERELA LLLAGVRDAL TEDQRDIQSE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -89.49 (PValue = 8.972859e-01)
Components of the Score Function:
Profile Score...............................................: -19.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.69
Term 14 Hydrophobicity of Tail [26..end]...................: -4.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0390 (length 60 amino acids):
MMRPYSLPLP SPFLSALSTS PTLHSCGFPL PAKRPFATTS EKHFLTVHSL YYLTAAVCFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -39.75 (PValue = 1.252304e-01)
Components of the Score Function:
Profile Score...............................................: -3.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.76
Term 4 Volume Compensation (-1, 1, 2).....................: -2.32
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0370 (length 60 amino acids):
MNVEVTGRCF FTGDDYYISL PITNRAANRG EPRQLLCSEM IHWDDYRQER GINDGKPPMQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -101.37 (PValue = 9.609148e-01)
Components of the Score Function:
Profile Score...............................................: -29.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.49
Term 4 Volume Compensation (-1, 1, 2).....................: -1.98
Term 5 Volume Compensation (-1, 2)........................: -1.01
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.47
Term 14 Hydrophobicity of Tail [26..end]...................: -4.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0360 (length 60 amino acids):
MIRVPSNWAC AQSPCAFVEV GDECYLCRLV PVFAATLTYE LETSVRVSLL EARRFASQDF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -57.14 (PValue = 3.787126e-01)
Components of the Score Function:
Profile Score...............................................: -7.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -1.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.15
Term 14 Hydrophobicity of Tail [26..end]...................: -3.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0250 (length 60 amino acids):
MGILGLSKLL YDKSPNAIRE QELKNFFGRR IAVDASMSIY QFIIAMKGFQ DGQGLELTNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -60.64 (PValue = 4.473014e-01)
Components of the Score Function:
Profile Score...............................................: -16.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.95
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.88
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0240 (length 60 amino acids):
MPRYTTRATS KNTNRRGLSS RDETKRCVNM TLSEEEVQKS VSMQRHTNPK STAHLQAEAE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -61.16 (PValue = 4.578408e-01)
Components of the Score Function:
Profile Score...............................................: -13.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -1.37
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.72
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.27.0230 (length 60 amino acids):
MSSGAVGRGS FHSVVAGANP RRIPTYYNSA YELIQLHRAH REVTRNFLVR DKVFDNKFPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -102.91 (PValue = 9.659152e-01)
Components of the Score Function:
Profile Score...............................................: -14.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -9.58
Term 4 Volume Compensation (-1, 1, 2).....................: -9.41
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.24
Term 14 Hydrophobicity of Tail [26..end]...................: -2.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -72.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2320 (length 60 amino acids):
MPPKRPQALE KLHVAPHDKA VSITDTMTLV VKGEGGVEMR VKQTGIAQGP GSSSGSGQPK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -76.68 (PValue = 7.497881e-01)
Components of the Score Function:
Profile Score...............................................: -3.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.30
Term 14 Hydrophobicity of Tail [26..end]...................: -3.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2280 (length 60 amino acids):
MKLYVEDVLV VFPYEYIYPE QLDYITELKR GLDKGGHMVL EMPSGTGKTI SLLSILVAYL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -9.50 (PValue = 6.582119e-03)
Components of the Score Function:
Profile Score...............................................: -3.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.26
Term 4 Volume Compensation (-1, 1, 2).....................: -1.02
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.11
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2030 (length 60 amino acids):
MHAKSIQSIT GRPILVTGAA SGLGAATARF LAQMGAKVTL LDRNAAQGEQ VSKEINGKFV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -57.03 (PValue = 3.765564e-01)
Components of the Score Function:
Profile Score...............................................: -5.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.59
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1890 (length 60 amino acids):
MQIGLAGCSS SLHTSPSSGS AAGSGFYGAR GQEAAASATV NSSGANGLCA GATMSSPSAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -39.56 (PValue = 1.234240e-01)
Components of the Score Function:
Profile Score...............................................: 8.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.22
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.37
Term 14 Hydrophobicity of Tail [26..end]...................: -2.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1590 (length 60 amino acids):
MDAAIAQLRG CLEELLTYYP HVLRNVFEVE PSPLAAPKLS QQRPRDSSAL ADVIEDFLTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -48.55 (PValue = 2.315733e-01)
Components of the Score Function:
Profile Score...............................................: -0.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1570 (length 60 amino acids):
MQPTQNPTQT PQQDPLPDLN TLATNAFFPF PSAAGAASAE GGQQQMATAN LYGASQLESI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -36.17 (PValue = 9.474677e-02)
Components of the Score Function:
Profile Score...............................................: -8.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -1.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.61
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1370 (length 60 amino acids):
MSSPEQLPAL SAAGSSSSRV ASSHHSPHEA SLPFPASAIP GDASAESPRA SSMSRSSRAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -51.42 (PValue = 2.763228e-01)
Components of the Score Function:
Profile Score...............................................: -0.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.27
Term 14 Hydrophobicity of Tail [26..end]...................: -3.49
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1360 (length 60 amino acids):
MGSSSSTLET AKLVRTLLSE DAAPPESLTQ LLNMTMTEEE TSRVFTVEKV RQLRHLYTRN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -67.11 (PValue = 5.777468e-01)
Components of the Score Function:
Profile Score...............................................: -15.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.83
Term 4 Volume Compensation (-1, 1, 2).....................: -3.24
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1300 (length 60 amino acids):
MLRRSYPWRV MTPRQALRVL SLSPTADLTP ASIKKAYIRQ TLQCHPDLHP NNPNATENFR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -95.55 (PValue = 9.361692e-01)
Components of the Score Function:
Profile Score...............................................: -29.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.42
Term 4 Volume Compensation (-1, 1, 2).....................: -2.36
Term 5 Volume Compensation (-1, 2)........................: -0.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.61
Term 14 Hydrophobicity of Tail [26..end]...................: -3.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0940 (length 60 amino acids):
MSAFMEKYHI DKALGTTLRA VQSVWGWTRE RLWPIYSAAV VISLFQMIAV ASEKQILADH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 24 had the best score.
Total Score.................................................: -66.70 (PValue = 5.696555e-01)
Components of the Score Function:
Profile Score...............................................: -16.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.88
Term 4 Volume Compensation (-1, 1, 2).....................: -0.99
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.30
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0770 (length 60 amino acids):
MFAKSLVHLI EVSKRPGRGV DYLRNRFTNK GTAFTAAERS HMNVEGLLPP SVETLDDQVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -54.60 (PValue = 3.313939e-01)
Components of the Score Function:
Profile Score...............................................: -16.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.93
Term 14 Hydrophobicity of Tail [26..end]...................: -2.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0670 (length 60 amino acids):
MDEVSVLNYL GPHPQIVRFL GSYTTSKNTS FFTMELMDSD VGRELREGNA TLHEEGVCAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -65.81 (PValue = 5.519100e-01)
Components of the Score Function:
Profile Score...............................................: 2.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.67
Term 14 Hydrophobicity of Tail [26..end]...................: -1.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0480 (length 60 amino acids):
MADICAECTS SIAAASTGTL GTPPPMIWAA GNSAPRRHGS PSSSCTMAKQ QRMLSLPSSR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -39.73 (PValue = 1.250523e-01)
Components of the Score Function:
Profile Score...............................................: 1.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.53
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0330 (length 60 amino acids):
MLRRLVGGLA SRGGSIMNLR ASHFSLSSPS SPLHASQPSP CHTSVRAIGT AMPGAMHQPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -60.80 (PValue = 4.505270e-01)
Components of the Score Function:
Profile Score...............................................: -2.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: -0.13
Term 5 Volume Compensation (-1, 2)........................: -0.19
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0200 (length 60 amino acids):
MSDSEWSSDS GVSNAEAIAA ASLNKHLGEL MTLQHPSRVT HRRPAYATSE GTTASSATIS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -47.69 (PValue = 2.190592e-01)
Components of the Score Function:
Profile Score...............................................: 5.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.21
Term 14 Hydrophobicity of Tail [26..end]...................: -1.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1870 (length 60 amino acids):
MLQELCTLLF TPSRDKGVRR WQQAAIAFSG LWGISIFFTI STSFLIASMQ ALVLLNTAAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -19.46 (PValue = 2.060984e-02)
Components of the Score Function:
Profile Score...............................................: -7.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.53
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.16
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1790 (length 60 amino acids):
MGTIEGHNNY ITVENLLYFS GLRFLAVRVP SPFAMAEPST PAPPTETHCG LLVFALRDVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -29.10 (PValue = 5.204945e-02)
Components of the Score Function:
Profile Score...............................................: -7.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.20
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1440 (length 60 amino acids):
MNDIYARRLA QTSMFHQLMR SHGTLWAATQ VTKEKLNLAF VKEEMMRVNG RRAMPLLIGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -28.34 (PValue = 4.865022e-02)
Components of the Score Function:
Profile Score...............................................: -9.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.82
Term 4 Volume Compensation (-1, 1, 2).....................: -4.57
Term 5 Volume Compensation (-1, 2)........................: -3.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.11
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1370 (length 60 amino acids):
MSNLNPNAPS FPVSNYQPNT THNKQGYNNG GGPSGGGGTM QNERYGGGMI YDNSNYHQGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -67.57 (PValue = 5.869119e-01)
Components of the Score Function:
Profile Score...............................................: 0.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.03
Term 14 Hydrophobicity of Tail [26..end]...................: -3.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1250 (length 60 amino acids):
MNNSNFCFMN SMLQALMFIP SFAQLTVSVS CDAQARQLCP TLVTLGKWTL QYWKPGFTRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -45.95 (PValue = 1.951860e-01)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.14
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1170 (length 60 amino acids):
MCNRAPSQQL SPLSLDHHCG HRSIPSFSIS AEEQPRLALL WAVRNIAFSS RPQMSSSSAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -67.55 (PValue = 5.865189e-01)
Components of the Score Function:
Profile Score...............................................: -7.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.20
Term 4 Volume Compensation (-1, 1, 2).....................: -1.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.22
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1010 (length 60 amino acids):
MTFSSRANGP LLVPPSNFSM VEDGVYRSAY PTEENVLYLR HIGITNLVLL SIEQLPGPVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -46.02 (PValue = 1.960731e-01)
Components of the Score Function:
Profile Score...............................................: -17.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.49
Term 4 Volume Compensation (-1, 1, 2).....................: -2.89
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.08
Term 9 Volume Limitation [3..8]...........................: -1.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0950 (length 60 amino acids):
MSYVVYAVEN ADRMILMGPT VADQPTFKAI TLSYIQAPKL ARRTASGDFT PEEPYAYEAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -57.65 (PValue = 3.884123e-01)
Components of the Score Function:
Profile Score...............................................: -2.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.28
Term 14 Hydrophobicity of Tail [26..end]...................: -2.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.85
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0760 (length 60 amino acids):
MSSSPLSPVY SSPASTGFGA PYLPSFTRRY FRLSQSAFVI SDYLVRKFCL TESVLLTSLC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -23.97 (PValue = 3.236818e-02)
Components of the Score Function:
Profile Score...............................................: -10.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.53
Term 4 Volume Compensation (-1, 1, 2).....................: -3.41
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: -2.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.39
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0690 (length 60 amino acids):
MVRDTAEKKG FKAAMGMEAM KAKMESVKRS KRSKYTPASQ HSHGNPIHRP LKFHERKLLK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -78.16 (PValue = 7.719769e-01)
Components of the Score Function:
Profile Score...............................................: -15.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.15
Term 14 Hydrophobicity of Tail [26..end]...................: -1.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0610 (length 60 amino acids):
MSRLVTQHKT YVHHVALDPS GSLLASCSSD KTVEVFHRRT LPGGGAVWEP GCAMHDHSGP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -75.71 (PValue = 7.344332e-01)
Components of the Score Function:
Profile Score...............................................: -8.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.91
Term 14 Hydrophobicity of Tail [26..end]...................: -3.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0600 (length 60 amino acids):
MLPRPQTYQA KPYVPVTSAA IDPYEEGQSF LVDNDRLDSW FRYVEAELQR YRSPFVAAEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -74.79 (PValue = 7.194716e-01)
Components of the Score Function:
Profile Score...............................................: -9.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.97
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.60
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.03
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0550 (length 60 amino acids):
MGGRTAFEDV CANEAKAWSI CLETNLGGKD VRKKCGEQQQ TFDTCVSAWR TKVGNAVQVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -54.30 (PValue = 3.258871e-01)
Components of the Score Function:
Profile Score...............................................: -15.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.38
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -22.64
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0510 (length 60 amino acids):
MAPLPPKPHS KNRLEQQQLP HIYARYSPLS VSAVFFVLAV AAIPIGVVVI VSGDLTTRLD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -28.03 (PValue = 4.730813e-02)
Components of the Score Function:
Profile Score...............................................: -3.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.52
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -4.26
Term 9 Volume Limitation [3..8]...........................: -1.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0500 (length 60 amino acids):
MPAKSAKSKT QTLRDERKLG VEKLVELVFI GRPRTLSFSH RSLGSLRHPY SSLICETSAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -52.62 (PValue = 2.964340e-01)
Components of the Score Function:
Profile Score...............................................: -3.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.79
Term 4 Volume Compensation (-1, 1, 2).....................: -2.04
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0473 (length 60 amino acids):
MGGDGQALAN KRSLLQKSRA YVSAADLESG QAKEKTSQKS RTVERWSHCA LSLQPLEAPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -43.16 (PValue = 1.608566e-01)
Components of the Score Function:
Profile Score...............................................: -6.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.71
Term 4 Volume Compensation (-1, 1, 2).....................: -4.81
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.77
Term 14 Hydrophobicity of Tail [26..end]...................: -0.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0410 (length 60 amino acids):
MESLSRLAYG PSPPPTDAKG QSRGRNTGKK QRFSPPSSAR ADAAHAATAP HRKREAKRLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -52.81 (PValue = 2.996573e-01)
Components of the Score Function:
Profile Score...............................................: -5.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.21
Term 14 Hydrophobicity of Tail [26..end]...................: -1.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0300 (length 60 amino acids):
MDPAMQAGVQ GGVPIHLDVL QSAPPPALVE QEAEAADGGS THKPASQGGK ERTAVPLKSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -45.96 (PValue = 1.953713e-01)
Components of the Score Function:
Profile Score...............................................: -5.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: -0.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0010 (length 60 amino acids):
MLRFTIVRRL GSPTYGSWPW PSKLPLKKDW YYRLSRRESI ADETRQYMVV GDFLLLFVLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -6.26 (PValue = 4.282354e-03)
Components of the Score Function:
Profile Score...............................................: -3.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1550 (length 60 amino acids):
MGSSSSKAKA TPAVSVPRYE DSPPESTNIG DLVVSGRYKV ASPETVELMK QIQAPRDANK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -80.66 (PValue = 8.064430e-01)
Components of the Score Function:
Profile Score...............................................: -19.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.74
Term 4 Volume Compensation (-1, 1, 2).....................: -0.50
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1530 (length 60 amino acids):
MNAMYSADQI HVPPELGTIM KQYTKAVMRD KPTDLYKYSA NFFAILSGYA APFDSEGQLM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -66.60 (PValue = 5.676256e-01)
Components of the Score Function:
Profile Score...............................................: -24.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.75
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1470 (length 60 amino acids):
MQHLTYAAMK ALVTKKLSGD LHMCILDVRS TDEVAGGAIP ASVNVPLDQL ETALQLTADE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -25.31 (PValue = 3.678075e-02)
Components of the Score Function:
Profile Score...............................................: -10.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.58
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0840 (length 60 amino acids):
MSARKFAGEY VSRHLDGLTV LASLADRPAA AKPVICTHNG SFHCDEAMAC GLLRHVPEYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -43.76 (PValue = 1.678129e-01)
Components of the Score Function:
Profile Score...............................................: -9.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.00
Term 5 Volume Compensation (-1, 2)........................: -0.31
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.02
Term 14 Hydrophobicity of Tail [26..end]...................: -2.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0420 (length 60 amino acids):
MSVAMEAIHD FYFKDNFFTS GVAGACRKGN STRTIPTARA AVGQDAVFVS LRGIPPYLYR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -42.53 (PValue = 1.537982e-01)
Components of the Score Function:
Profile Score...............................................: -8.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0290 (length 60 amino acids):
MRADGPSSAA TRPNAASAMV AGARVYLADP ATLSKATFSC DGVFLPSSPT AATPAAMAAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -43.64 (PValue = 1.664363e-01)
Components of the Score Function:
Profile Score...............................................: -0.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.37
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0190 (length 60 amino acids):
MSKHFAGRKD AERTTGLAYL LSPSRVRSPG ELRFRRHGYL RCGFVIGMVL YFVYCNPEYS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -46.38 (PValue = 2.008852e-01)
Components of the Score Function:
Profile Score...............................................: -0.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.75
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -3.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0172 (length 60 amino acids):
MSAYVLSTPL EARVAKCASL RAANAVPVVV EEAQARGGKA YFSALARETT VAQLVAAVRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.44 (PValue = 6.390272e-02)
Components of the Score Function:
Profile Score...............................................: -11.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0162 (length 60 amino acids):
MSAYVLSTPL EARVAKCASL RAANAVPVVV EEAQARGGKA YFSALARETT VAQLVAAVRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -31.44 (PValue = 6.390272e-02)
Components of the Score Function:
Profile Score...............................................: -11.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0020 (length 60 amino acids):
MDPKEFVQRF PKSALSAKLV LSLEITEQRD FVVSLIDDAV YCDSWEAYFD FAERNNVAIT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -66.26 (PValue = 5.608873e-01)
Components of the Score Function:
Profile Score...............................................: -17.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.51
Term 14 Hydrophobicity of Tail [26..end]...................: -1.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1650 (length 60 amino acids):
MDRVYIKCCS TFSLAAANWN EAYQLALEMG DSTIQLATAR QDKLRQVEKA FEEEVVQGAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -77.48 (PValue = 7.620278e-01)
Components of the Score Function:
Profile Score...............................................: -22.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -9.47
Term 4 Volume Compensation (-1, 1, 2).....................: -6.61
Term 5 Volume Compensation (-1, 2)........................: -2.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.13
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1420 (length 60 amino acids):
MPRATFMSGS IRRTGSSVGS KAFMPRLITA APDYTAYPSD VSKYLKDVIR RREEALMFKL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -81.69 (PValue = 8.194864e-01)
Components of the Score Function:
Profile Score...............................................: -26.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.35
Term 4 Volume Compensation (-1, 1, 2).....................: -1.95
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1400 (length 60 amino acids):
MSSSAHTSTS AAQLGDAAFD NNVKMSAEFL ALTYGALVQQ MVEELTQEDA VEQVNQQLYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -75.51 (PValue = 7.311951e-01)
Components of the Score Function:
Profile Score...............................................: -17.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.33
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1360 (length 60 amino acids):
MSAHRIFLGL AIAAGAALSY HFAYLLGLIT YGVAVCALCN WWMSAFMRAG PRTSRQIPQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -71.86 (PValue = 6.685734e-01)
Components of the Score Function:
Profile Score...............................................: -11.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.25
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.93
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.74
Term 14 Hydrophobicity of Tail [26..end]...................: -3.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1210 (length 60 amino acids):
MQHPPVTTVG AHAPLKHRVR SLWRVLPLST KSNRWVPLME SWETALQHTR NAAVLRIQRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.96 (PValue = 3.562784e-01)
Components of the Score Function:
Profile Score...............................................: -20.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1145 (length 60 amino acids):
MADVQLKALL MGVEAERGAT VTCRDPSALE MLLRISNSDA HRGSVCVIFQ NASAAASPGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -46.75 (PValue = 2.060008e-01)
Components of the Score Function:
Profile Score...............................................: -6.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.91
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1080 (length 60 amino acids):
MSRITSHPAI PPPPSRAPGR QRASVGMASV VTEPDSAQMA QENITLLQAL VQPTRYRRRV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -42.91 (PValue = 1.580334e-01)
Components of the Score Function:
Profile Score...............................................: -3.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.32
Term 14 Hydrophobicity of Tail [26..end]...................: -3.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2510 (length 60 amino acids):
MITNPGPLRV AYSPDYLDWL YRAYRSKLKY TDERKKAEEV FNGLLLTNQT DEQGPAAGAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.84 (PValue = 4.116147e-01)
Components of the Score Function:
Profile Score...............................................: -6.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.58
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -5.16
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.48
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2370 (length 60 amino acids):
MASKKSSVAV KKASTATSTA KRGQDAQQKR ALKEKAEQEA LAQWIDSNDP LLDKTAENPI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -64.69 (PValue = 5.293185e-01)
Components of the Score Function:
Profile Score...............................................: -6.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.75
Term 5 Volume Compensation (-1, 2)........................: -1.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.96
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2340 (length 60 amino acids):
MLRRNFWRLV GLDKVQSLEE AVADMTDGIS VAVGGFGCSG VPDAVISAMC KKGPKDMILY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -53.19 (PValue = 3.062665e-01)
Components of the Score Function:
Profile Score...............................................: -0.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.52
Term 4 Volume Compensation (-1, 1, 2).....................: -2.02
Term 5 Volume Compensation (-1, 2)........................: -3.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.70
Term 14 Hydrophobicity of Tail [26..end]...................: -1.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2210 (length 60 amino acids):
MHNRWVAKST KEYMSEADSK VSKGNSLLFG ARERRREGME RRKERFREVA EETDRTFELE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -87.07 (PValue = 8.768443e-01)
Components of the Score Function:
Profile Score...............................................: -21.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.10
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -49.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2060 (length 60 amino acids):
MFRRLALQSV AGRRAVCSGA RTYFYANCGE TGISGATMQV LIKLTLACCV VQICAIRYFV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -15.65 (PValue = 1.367218e-02)
Components of the Score Function:
Profile Score...............................................: -10.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1750 (length 60 amino acids):
MPFLQTIVSV SLDDQKRANL SAAYGMICRE ELGKPEDFVM TAFSDKTPIS FQGSTAPAAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -63.31 (PValue = 5.012282e-01)
Components of the Score Function:
Profile Score...............................................: -13.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1580 (length 60 amino acids):
MIAIAATPTL SNGAGMAVQR LRILLPGERR GEVRLLTFKK SVLTAASFEE ATHDGYTHRL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -68.04 (PValue = 5.960885e-01)
Components of the Score Function:
Profile Score...............................................: -13.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.30
Term 14 Hydrophobicity of Tail [26..end]...................: -2.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1340 (length 60 amino acids):
MELKVRDRSA EFAERRATVC TRCDRSESSV PEKPTEQLFT APLWSRLPSD FEENALALSH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -57.21 (PValue = 3.799523e-01)
Components of the Score Function:
Profile Score...............................................: -3.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -9.93
Term 4 Volume Compensation (-1, 1, 2).....................: -12.66
Term 5 Volume Compensation (-1, 2)........................: -8.40
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1250 (length 60 amino acids):
MRATRSVRAV HAFVRMPHHR SVPPTGPSGI LVNRDVLFRQ FRDFYRTIQH STLVDKVHLM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -73.74 (PValue = 7.016894e-01)
Components of the Score Function:
Profile Score...............................................: -18.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.32
Term 9 Volume Limitation [3..8]...........................: -0.89
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.41
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0910 (length 60 amino acids):
MYLAVFHEFA HPEVLENVKA EGICDVDVAP EPNKLAASEE EQQVLRCNAK LITVKHNITG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -68.87 (PValue = 6.124200e-01)
Components of the Score Function:
Profile Score...............................................: -21.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.42
Term 4 Volume Compensation (-1, 1, 2).....................: -0.58
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0880 (length 60 amino acids):
MSSTPALAHG EYLNRMLVLA AAATTFVGYA SSVYWERTVA PCLCRRHESA LEQEIAELER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -72.27 (PValue = 6.759175e-01)
Components of the Score Function:
Profile Score...............................................: -15.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.74
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0816 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0802 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0760 (length 60 amino acids):
MLPGCPPPPP TAAYSAQPSV ASGGSIAGYA ASVSALEQRR RMAGLDAARR LNRGAQWRNE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -86.44 (PValue = 8.710207e-01)
Components of the Score Function:
Profile Score...............................................: -12.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.66
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.64
Term 14 Hydrophobicity of Tail [26..end]...................: -4.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0565 (length 60 amino acids):
MGQSFDLLRT HDEVPDDVKA AIPPIEYTAA PEESRPHNRE FCEDCGEYFG WFCWSTNCDW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -87.18 (PValue = 8.778650e-01)
Components of the Score Function:
Profile Score...............................................: -16.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.18
Term 4 Volume Compensation (-1, 1, 2).....................: -3.20
Term 5 Volume Compensation (-1, 2)........................: -2.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.38
Term 14 Hydrophobicity of Tail [26..end]...................: -4.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0540 (length 60 amino acids):
MKIGGLDVSL IALLPVAPTT WRRGLGSRQS TSRPSFVSCC RVPQRTVFVR FQPTPNDACY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -72.78 (PValue = 6.850552e-01)
Components of the Score Function:
Profile Score...............................................: -14.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.44
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.27
Term 14 Hydrophobicity of Tail [26..end]...................: -3.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0520 (length 60 amino acids):
MVLMESLVLE KKGELTIREV DVCDELGPHD CRVKIHSVGI CGSDVHYYEH GHIGPFVVEK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -41.01 (PValue = 1.376451e-01)
Components of the Score Function:
Profile Score...............................................: -9.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.62
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0440 (length 60 amino acids):
MHDRTLSGSG HHRTAVATWS YLLHSLRQNV EQAVPDALYE KLLTDEVPLT PAESRQLADA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -66.07 (PValue = 5.570764e-01)
Components of the Score Function:
Profile Score...............................................: -15.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.26
Term 9 Volume Limitation [3..8]...........................: -1.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.43
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0270 (length 60 amino acids):
MKFILHSLSY YLKEYPLRTN MALSTTIGFC GDIVCQTIYE PWLQSRPPLT RERLPNESQN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -79.71 (PValue = 7.939059e-01)
Components of the Score Function:
Profile Score...............................................: -11.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.80
Term 4 Volume Compensation (-1, 1, 2).....................: -0.64
Term 5 Volume Compensation (-1, 2)........................: -2.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.27
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.06
Term 14 Hydrophobicity of Tail [26..end]...................: -3.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -56.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0100 (length 60 amino acids):
MSSVGVWLPI FFARRGRDER ATALLAARAR GRRPHTTATL ATTKLWLSLA NFVSAGMLLT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -22.25 (PValue = 2.735594e-02)
Components of the Score Function:
Profile Score...............................................: -12.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.24
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0090 (length 60 amino acids):
MPLAQRTEWR PRPTVPIEHN STLSTGCQPA AITDVFFSCC ASPLCQESAL LSIFKQLSAD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -32.17 (PValue = 6.806473e-02)
Components of the Score Function:
Profile Score...............................................: -6.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.94
Term 14 Hydrophobicity of Tail [26..end]...................: -0.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0040 (length 60 amino acids):
MRCGRILRAT RVNSAAYRCF LQALRQCGVE YAPALPESTS DSLSHTSAAL FSPLFTTQFD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -41.98 (PValue = 1.477593e-01)
Components of the Score Function:
Profile Score...............................................: -0.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.06
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1225 (length 60 amino acids):
MTKLTVVCRA VSSALEKQTC ELTCIERQTI SLETMRKQHK TYVQVFKEMI EDGYDIELIE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -78.77 (PValue = 7.807561e-01)
Components of the Score Function:
Profile Score...............................................: -32.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.09
Term 4 Volume Compensation (-1, 1, 2).....................: -1.53
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1090 (length 60 amino acids):
MDKGVYYITG GVCTDGEGSD TSSQSPTAAL VSGTACGAAP QPPDITVGWC FDARMLLHRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -50.24 (PValue = 2.573128e-01)
Components of the Score Function:
Profile Score...............................................: -4.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.06
Term 14 Hydrophobicity of Tail [26..end]...................: -0.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0710 (length 60 amino acids):
MACKLGVAIY VVLQLIAFVA VMVGTGVDMF YNKPEHSSGA RVCITLWGAK TDCRKPKITN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -75.72 (PValue = 7.346524e-01)
Components of the Score Function:
Profile Score...............................................: -7.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.95
Term 9 Volume Limitation [3..8]...........................: -0.73
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.00
Term 14 Hydrophobicity of Tail [26..end]...................: -3.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -56.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0460 (length 60 amino acids):
MRPVTRSPLL VAAVVVAATL CLNGDNAILS LSSGVRLAHA NGPITKDQCF ILNPQPTVTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -45.21 (PValue = 1.856638e-01)
Components of the Score Function:
Profile Score...............................................: -10.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.05
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0440 (length 60 amino acids):
MIACAALQRL ERYGSLGLKR HSTEDFVSTS LKDPRRANIY ALTLLSTWKE ALQAVRGDDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -49.33 (PValue = 2.432276e-01)
Components of the Score Function:
Profile Score...............................................: -6.44
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.28
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.60
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0330 (length 60 amino acids):
MQAQMMLGQA LEHYAMMDFA NLVLEQCWDI CYDSQLTRPE LAGGALPDVK AQKMDACARK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -66.52 (PValue = 5.661149e-01)
Components of the Score Function:
Profile Score...............................................: -9.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.08
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.67
Term 14 Hydrophobicity of Tail [26..end]...................: -3.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0250 (length 60 amino acids):
MDRQAVNTAQ RGPNPHHVKR RLPPPTPPAP LRSSLLMNSL LMEAMVKPLQ RYPTLGATVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -49.71 (PValue = 2.490767e-01)
Components of the Score Function:
Profile Score...............................................: -9.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.25
Term 4 Volume Compensation (-1, 1, 2).....................: -2.12
Term 5 Volume Compensation (-1, 2)........................: -3.60
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1120 (length 60 amino acids):
MTSHQSTYVR VAPSPRFKDS QTPASSELIQ LRVQHMLPQT TQRAKERVGN LKRLYAVPHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -68.89 (PValue = 6.127074e-01)
Components of the Score Function:
Profile Score...............................................: -19.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.69
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1060 (length 60 amino acids):
MTKTNGQNAA RKLVRLRCRN RWADKGWKRA HTFSARKANP FGGSSHAKGI VLEKIGVGAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -35.45 (PValue = 8.936476e-02)
Components of the Score Function:
Profile Score...............................................: -6.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -16.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1010 (length 60 amino acids):
MPREIVTVQV GQCGNQLGQR WFDVMLQEHK AYPHFPEARD AVFLEAMNHP GRLKARCVAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.67 (PValue = 4.680710e-01)
Components of the Score Function:
Profile Score...............................................: -15.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.12
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -3.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.48
Term 14 Hydrophobicity of Tail [26..end]...................: -0.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -30.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1000 (length 60 amino acids):
MSEHTSTNAD LLRMSCADLA PRGMLAAAPV TTAATELAAS APCSASVAAA PFVHSLVSTQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -23.38 (PValue = 3.057664e-02)
Components of the Score Function:
Profile Score...............................................: 4.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.14
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.70
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0970 (length 60 amino acids):
MPLHPNSLLG VTPLSLLQQR LQRGRCDGSA SSWLHRRLPL QRRCEARGEV QRRSFASRDM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -78.17 (PValue = 7.721345e-01)
Components of the Score Function:
Profile Score...............................................: -12.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.14
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.94
Term 14 Hydrophobicity of Tail [26..end]...................: -3.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0950 (length 60 amino acids):
MSHKRDQLTS ETKLGGTPTY FPPLSDADKA QIRRWTSCGV CGHAMSLLTQ AYSPLPTAPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -44.77 (PValue = 1.801338e-01)
Components of the Score Function:
Profile Score...............................................: -4.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0810 (length 60 amino acids):
MLKFFTEKAN HQALKAVLCA VFVQKPLEVT LGSTYSTPYL QLPKSRALLY SCNEAARLIW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -44.77 (PValue = 1.800525e-01)
Components of the Score Function:
Profile Score...............................................: -1.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.50
Term 4 Volume Compensation (-1, 1, 2).....................: -3.27
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.55
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.38
Term 14 Hydrophobicity of Tail [26..end]...................: -0.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0670 (length 60 amino acids):
MHAEAAAEAA MPVIATLSSR VVRIMGLNPG YMTLQGSNTY LVGTGQERLL IDSGEGVEGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -60.98 (PValue = 4.542616e-01)
Components of the Score Function:
Profile Score...............................................: -22.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.21
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: -1.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.84
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0590 (length 60 amino acids):
MESRVPFSAA SLAAYAMPEA DDNTYMQTVV VPPQSHTCTA AAAAVGAASS TDVANDDYAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -53.45 (PValue = 3.108510e-01)
Components of the Score Function:
Profile Score...............................................: 3.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.14
Term 14 Hydrophobicity of Tail [26..end]...................: -2.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -57.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0560 (length 60 amino acids):
MERTFAQQND LCTQDQLLDQ LHASVMNTRH YAIQIGNDLG EQDDMLDRLH GNVTRTADES
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -68.93 (PValue = 6.135342e-01)
Components of the Score Function:
Profile Score...............................................: -13.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.65
Term 4 Volume Compensation (-1, 1, 2).....................: -2.46
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0530 (length 60 amino acids):
MSAITSFAAA AVGASSAEYV NYVDIKLDGV HHLPADWVSA GFPALTPGTA GGAAGAGANH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -32.90 (PValue = 7.239084e-02)
Components of the Score Function:
Profile Score...............................................: -4.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.03
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -16.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0490 (length 60 amino acids):
MVRETELYEV LNVSVEANEH EIKRSYRRLA LKYHPDKNTG DEAAADMFKK VSNAYEVLSD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -37.70 (PValue = 1.069175e-01)
Components of the Score Function:
Profile Score...............................................: -8.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0320 (length 60 amino acids):
MDPSAVAALG TAAGAGQHHP HNGSGNGVLS AGQPSEAEMK RIRQRRRLAC KTPEQRRKLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -94.81 (PValue = 9.322621e-01)
Components of the Score Function:
Profile Score...............................................: -24.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.02
Term 4 Volume Compensation (-1, 1, 2).....................: -1.16
Term 5 Volume Compensation (-1, 2)........................: -2.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.03
Term 14 Hydrophobicity of Tail [26..end]...................: -3.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0200 (length 60 amino acids):
MSTTSVVKLM PHEYLHVEDT NTCEVLTLVG PITYTLYDHH RQLHETPQPC VVVPPSRCVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -70.77 (PValue = 6.484584e-01)
Components of the Score Function:
Profile Score...............................................: -21.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.72
Term 4 Volume Compensation (-1, 1, 2).....................: -4.29
Term 5 Volume Compensation (-1, 2)........................: -2.92
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.75
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0125 (length 60 amino acids):
MLRRSVRALE KLVIVESPNK VIKVEGLLSD PKVIPDWSFN NSKLRAISTG AEKAIAMATT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -65.64 (PValue = 5.484252e-01)
Components of the Score Function:
Profile Score...............................................: -14.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.58
Term 4 Volume Compensation (-1, 1, 2).....................: -1.04
Term 5 Volume Compensation (-1, 2)........................: -1.63
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.59
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0055 (length 60 amino acids):
MRVTTELAGL VRRLPPQAYE RVLLLLHCLV ASSEGSQGSS NPQKLFLQVI CDVVLCACPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -29.00 (PValue = 5.161986e-02)
Components of the Score Function:
Profile Score...............................................: -3.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.44
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0050 (length 60 amino acids):
MLASDPFNDS VKELREVVVR AKLIEQQLTQ KGVISPSSVA ELRDAKETAE ELLHFLKEML
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -42.01 (PValue = 1.480702e-01)
Components of the Score Function:
Profile Score...............................................: -11.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0745 (length 60 amino acids):
MKAQPKQIGC YLVTEASREE SFVVLEGHEV DNPNRHVRAK ALLEDRAAPE NISVRIGIEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -51.03 (PValue = 2.699811e-01)
Components of the Score Function:
Profile Score...............................................: -9.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.27
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -29.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0740 (length 60 amino acids):
MRLHDVATAS VSGRQSGQQD APARPSAAGA ALAVTPLARS LPSPRSRCAT SATPPLPLPP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -48.42 (PValue = 2.296827e-01)
Components of the Score Function:
Profile Score...............................................: -11.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.95
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0670 (length 60 amino acids):
MRAEVKAKPG GGNESTLIEH MKASVQPSTA AAAEVQRAPQ NAAASNLQSG YSGIGSGPSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.83 (PValue = 3.539501e-01)
Components of the Score Function:
Profile Score...............................................: -3.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.80
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0540 (length 60 amino acids):
MTTPVPRRWR HSSAPPPPVS RRGPSPSSLL WGWGDSSGED THRGAATAST DAATAASPSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -46.46 (PValue = 2.020644e-01)
Components of the Score Function:
Profile Score...............................................: 3.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0470 (length 60 amino acids):
MQLSTIFLSA SFLSVGSFLV QIARSCTMAR NKEHKQRFAS KHALADKSKG RQLQSKQCNV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -70.26 (PValue = 6.388118e-01)
Components of the Score Function:
Profile Score...............................................: -10.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.03
Term 4 Volume Compensation (-1, 1, 2).....................: -1.39
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.43
Term 14 Hydrophobicity of Tail [26..end]...................: -1.77
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0460 (length 60 amino acids):
MRRVFSSAPR RYVRHASYAA GLFNSRVVPE ELFPYPSRQL DSDESETVQV LIEQIRSSDK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -51.77 (PValue = 2.821282e-01)
Components of the Score Function:
Profile Score...............................................: -15.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -0.67
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.50
Term 14 Hydrophobicity of Tail [26..end]...................: -3.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0360 (length 60 amino acids):
MRTRLCVRVC VCVCVALGTC SPVPDNYVAH LLHPRICPSH RSHAPRVSLH LPAKPLSANP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -51.16 (PValue = 2.720935e-01)
Components of the Score Function:
Profile Score...............................................: -5.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.97
Term 4 Volume Compensation (-1, 1, 2).....................: -0.81
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.30
Term 14 Hydrophobicity of Tail [26..end]...................: -1.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0220 (length 60 amino acids):
MMRCFRALRA RKDIVELLVC RGRLADIQML NFFSIQLDRE VSAATAAAAV PGSAVAAGGT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -21.82 (PValue = 2.621076e-02)
Components of the Score Function:
Profile Score...............................................: 5.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.87
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -15.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0160 (length 60 amino acids):
MGMEHYTKVK DLGGTNGAFL ARDRQQPHRL VVIKRLADGT QGIEELNASL RLRHPHIVRF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -44.52 (PValue = 1.770089e-01)
Components of the Score Function:
Profile Score...............................................: -6.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -2.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0080 (length 60 amino acids):
MFRMKSLKLL VVIGVSLALC STLSLAAENG KRLYPACGVT EHTTSASSQV TSTLYSFSGR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -49.42 (PValue = 2.445634e-01)
Components of the Score Function:
Profile Score...............................................: 0.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1650 (length 60 amino acids):
MRKSTSVYTL RSHRCFITLR AVIPILIFIC LCGAVGTIFL TSSHQSALGW TREPTTSAPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -56.19 (PValue = 3.606196e-01)
Components of the Score Function:
Profile Score...............................................: 0.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1600 (length 60 amino acids):
MQQPRPGPAQ AAPRSYDKKA YQTIYPQYLD SYLTPSEGRR LTKSQGVEHP TMEEILQALR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -35.06 (PValue = 8.660303e-02)
Components of the Score Function:
Profile Score...............................................: -3.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.60
Term 4 Volume Compensation (-1, 1, 2).....................: -0.83
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1440 (length 60 amino acids):
MAQLVPLAEL PSGKKIYSVR GQRFEVDREY DLVKVVGFGA CGTVCSAVAN GSGERVAIKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -44.02 (PValue = 1.708926e-01)
Components of the Score Function:
Profile Score...............................................: -4.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1150 (length 60 amino acids):
MAGLQSENIS INSTRLPEQS ASDKDICVFC FRRATPSSSD PHAPLFPFFS LVDCRHYACQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -59.46 (PValue = 4.239434e-01)
Components of the Score Function:
Profile Score...............................................: 0.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.11
Term 14 Hydrophobicity of Tail [26..end]...................: -4.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0765 (length 60 amino acids):
MAQCVRRLVL AATLAAAVAL LLCTSSAPVA RAAGTNDFTA AQRTNTLAVL QAFGRAIPEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -29.23 (PValue = 5.267922e-02)
Components of the Score Function:
Profile Score...............................................: -2.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.15
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0360 (length 60 amino acids):
MVVSLIGPLD SPYVQRTLLV AAYAGIQLKL VPIQIGRENE TEEYRLNCHP MQRVPVMKTD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -78.99 (PValue = 7.838389e-01)
Components of the Score Function:
Profile Score...............................................: -15.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.89
Term 4 Volume Compensation (-1, 1, 2).....................: -1.32
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.88
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.39
Term 14 Hydrophobicity of Tail [26..end]...................: -2.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -51.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0250 (length 60 amino acids):
MSTNRVATVV AGLDGANPVK RERHPAWYPP LKLDGNGLKV MNSLTETLED FAPRDGRVVR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -63.83 (PValue = 5.119559e-01)
Components of the Score Function:
Profile Score...............................................: -14.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.86
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0130 (length 60 amino acids):
MGDHLGSRFT VIEQIGSGNY GSLYRVIDGE AATLADRIIA TKKLQDTINH PHVLREVSAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -69.66 (PValue = 6.274419e-01)
Components of the Score Function:
Profile Score...............................................: -26.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.12
Term 4 Volume Compensation (-1, 1, 2).....................: -3.35
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.69
Term 14 Hydrophobicity of Tail [26..end]...................: -0.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2920 (length 60 amino acids):
MSYGGYDQGY GGNQVYVGGF GCNMQDYSYQ QQQTMPYQAH GGYNPYGQLD VYPPQQMSGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -79.05 (PValue = 7.847501e-01)
Components of the Score Function:
Profile Score...............................................: -21.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.47
Term 14 Hydrophobicity of Tail [26..end]...................: -2.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.23
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2850 (length 60 amino acids):
MFPFAFEYPC EATFAHQMQN KQPSTLLASF FAYYHFLIPM RSRRSPAGDI EDRADVAAAT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -53.52 (PValue = 3.120130e-01)
Components of the Score Function:
Profile Score...............................................: -1.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.73
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2840 (length 60 amino acids):
MTSVIQRLRR IEVEGLENLR NLGGYHTNNS TKTTRWGVVY RSDQLFRVPA DVAQMVLVDQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -41.25 (PValue = 1.400175e-01)
Components of the Score Function:
Profile Score...............................................: -11.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.47
Term 4 Volume Compensation (-1, 1, 2).....................: -0.14
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0330 (length 60 amino acids):
MPAYVVAKQE AERMRKEAWR PLTFRMIQQR IRDHFVRDLD DETELRSSRY ILTTAQVERF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -44.86 (PValue = 1.811891e-01)
Components of the Score Function:
Profile Score...............................................: -13.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.08
Term 14 Hydrophobicity of Tail [26..end]...................: -2.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0010 (length 60 amino acids):
MSSVGGFKRR TAKNATTRRA VKRYEPKVVE NPKRVLFLKG VSSNDVVTDA MVDLMAIAKP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -42.67 (PValue = 1.553817e-01)
Components of the Score Function:
Profile Score...............................................: -10.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.27
Term 4 Volume Compensation (-1, 1, 2).....................: -0.39
Term 5 Volume Compensation (-1, 2)........................: -0.59
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0005 (length 60 amino acids):
MSAEAAHILK KKEGILSLEK YLDRKIVVSQ KGHEVHGVLK GFDNNVNLVL ADAELWHRDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -69.33 (PValue = 6.211754e-01)
Components of the Score Function:
Profile Score...............................................: -26.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.15
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.49
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1190 (length 60 amino acids):
MYTARPKSVT SCHFTTTGTG ERLHICVSST RRASTSVPRM RRTYHTKTTA VPLLAVALLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -22.69 (PValue = 2.856474e-02)
Components of the Score Function:
Profile Score...............................................: -7.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.23
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0770 (length 60 amino acids):
MERRETSRPN ACSKGQLLHI SYAMRATDDS DMAAPGGGDG ADRHALGSPG EGVGGAGPQP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -47.55 (PValue = 2.170160e-01)
Components of the Score Function:
Profile Score...............................................: -4.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0430 (length 60 amino acids):
MDAFSRSKSY SQAASTSTPP PSRSGAAAPG STAAQQQQHV FKNILKSVES HVRIMSAVER
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -41.38 (PValue = 1.414229e-01)
Components of the Score Function:
Profile Score...............................................: -6.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.23
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0290 (length 60 amino acids):
MSASLSAATP STTASKPLAT TTTTSSPGAF EVVYVDGACS HNGTSQARAG YGGYYGSMSD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.88 (PValue = 3.548497e-01)
Components of the Score Function:
Profile Score...............................................: -6.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.83
Term 14 Hydrophobicity of Tail [26..end]...................: -2.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0280 (length 60 amino acids):
MWIVLFHDTP HFWLVGGESY RVGKANCHVV IQDDRSISRT HLTITVGLQS STGARDAGEW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -62.15 (PValue = 4.777706e-01)
Components of the Score Function:
Profile Score...............................................: -15.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.68
Term 4 Volume Compensation (-1, 1, 2).....................: -3.57
Term 5 Volume Compensation (-1, 2)........................: -4.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0240 (length 60 amino acids):
MHVKRHNAKL MEWYDAQLGI QLPFSPVFFE LKQEERQAPL ILLTFCTVRE PTHRMAITVE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -72.42 (PValue = 6.785102e-01)
Components of the Score Function:
Profile Score...............................................: -20.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -10.60
Term 4 Volume Compensation (-1, 1, 2).....................: -5.76
Term 5 Volume Compensation (-1, 2)........................: -5.16
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.21
Term 14 Hydrophobicity of Tail [26..end]...................: -1.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0110 (length 60 amino acids):
MRYSHSRTLL DVERQQRDGR HGWQARMWHL TWLTLVLLGF YVVCTYNVWR YPRPVRHVWI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -60.95 (PValue = 4.535843e-01)
Components of the Score Function:
Profile Score...............................................: -9.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.80
Term 4 Volume Compensation (-1, 1, 2).....................: -6.46
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.34
Term 9 Volume Limitation [3..8]...........................: -4.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.69
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0070 (length 60 amino acids):
MTLMHDDVLV VAGVSVCHVS WFAVDTHSLL LASATADAAR ISQKDRWQQQ RPHDGGTWTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -96.10 (PValue = 9.389845e-01)
Components of the Score Function:
Profile Score...............................................: -33.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.72
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0050 (length 60 amino acids):
MVLKSNYPDA QPPTAMGAPP KKGPQPYRSP CYSSASANPT AASTLVQPFS LPMALQSPRM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -27.03 (PValue = 4.315182e-02)
Components of the Score Function:
Profile Score...............................................: 6.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.90
Term 14 Hydrophobicity of Tail [26..end]...................: -2.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0030 (length 60 amino acids):
MAKQKLGFKI KGKNVSYEGY PERRPKDLMD ILVKMGVDQA VVVTTFRENI ENHQEYSDTQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -116.81 (PValue = 9.923323e-01)
Components of the Score Function:
Profile Score...............................................: -27.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.22
Term 4 Volume Compensation (-1, 1, 2).....................: -6.22
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -16.59
Term 14 Hydrophobicity of Tail [26..end]...................: -5.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -73.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.3105 (length 60 amino acids):
MDCSEAVLVC RCCVVHYVVY ISPSPPPHSV PHFSILSRAI RLRLTEVAPQ RCRLCAAGLP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -56.87 (PValue = 3.734025e-01)
Components of the Score Function:
Profile Score...............................................: -11.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.63
Term 5 Volume Compensation (-1, 2)........................: -1.27
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2800 (length 60 amino acids):
MCRNNDSEDG DCLGCCGFLA SWFPGLRYPA QRCTSPDRST SSSCSSGSMG TMGASNDVTD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -47.65 (PValue = 2.184253e-01)
Components of the Score Function:
Profile Score...............................................: 1.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.36
Term 14 Hydrophobicity of Tail [26..end]...................: -2.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2770 (length 60 amino acids):
MSHNVRPSRY AVSQSKARIF VGQLEPYVTE QDLYPVFSCY GKILHLNIVR HSTTVTPNEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -77.85 (PValue = 7.674403e-01)
Components of the Score Function:
Profile Score...............................................: -26.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.48
Term 4 Volume Compensation (-1, 1, 2).....................: -2.01
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.73
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2720 (length 60 amino acids):
MLRRLHTRII GMGSVCGHAP SPPAELFFKS LPSPCDVDPA KYRRFQREEA EAHAARPPLT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -73.18 (PValue = 6.920639e-01)
Components of the Score Function:
Profile Score...............................................: -12.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.17
Term 4 Volume Compensation (-1, 1, 2).....................: -2.05
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.20
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2710 (length 60 amino acids):
MSAHSSAEAA VPAPASPQGS SSDISGTLTT AGNQPTVKRI KKLLNVANIK LTFPSGATYE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -54.51 (PValue = 3.296427e-01)
Components of the Score Function:
Profile Score...............................................: -7.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.29
Term 14 Hydrophobicity of Tail [26..end]...................: -2.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2680 (length 60 amino acids):
MDGYPLMVTE WILPPELRRP ADSQRTAENQ TYAVEAKSTE VARVRRALRC MCVLRCRGRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -71.06 (PValue = 6.538505e-01)
Components of the Score Function:
Profile Score...............................................: -16.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.17
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.33
Term 14 Hydrophobicity of Tail [26..end]...................: -0.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2500 (length 60 amino acids):
MHRRFILGHV LPRCMLALAP LSASRALSSA PGKVELRVKK RDGTHCHVYV PVGISLMHAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -30.10 (PValue = 5.687941e-02)
Components of the Score Function:
Profile Score...............................................: -0.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.90
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.30
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.18
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2460 (length 60 amino acids):
MTQLPKLVCF TTVVAGLIVL LTLYTVSTLR TADGDATVVG VNSAGYSVTD GWKALHFSKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -41.25 (PValue = 1.400215e-01)
Components of the Score Function:
Profile Score...............................................: 0.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2060 (length 60 amino acids):
MVAKQSTAKG GSRYPPLTAD QEKEVTELME LMRTKYDPLP QQLLALQRYN PQMEGTASEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -87.65 (PValue = 8.820399e-01)
Components of the Score Function:
Profile Score...............................................: -29.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.35
Term 4 Volume Compensation (-1, 1, 2).....................: -1.39
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.70
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.96
Term 14 Hydrophobicity of Tail [26..end]...................: -2.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2020 (length 60 amino acids):
MRAPPLAHDS LSTAHPSPSR SPLRPTPCAL APPPSATDAD YTSSPPPPPT QTHPFVFPLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -38.20 (PValue = 1.111661e-01)
Components of the Score Function:
Profile Score...............................................: 5.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.06
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.74
Term 14 Hydrophobicity of Tail [26..end]...................: -0.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1950 (length 60 amino acids):
MSSLILISSI AGAILAISSI IWCVTHAYSA LRAPSRRVYA DAESVTLQEE SAFGEAPSAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -61.15 (PValue = 4.575769e-01)
Components of the Score Function:
Profile Score...............................................: -11.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.46
Term 14 Hydrophobicity of Tail [26..end]...................: -2.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1940 (length 60 amino acids):
MHLSATAAAL LCVVSAAALG FGIIFALFAL MYFGCLRIPD GGVANGNRRW LRERNAPEQL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -85.87 (PValue = 8.655309e-01)
Components of the Score Function:
Profile Score...............................................: -15.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -6.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.98
Term 14 Hydrophobicity of Tail [26..end]...................: -2.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1830 (length 60 amino acids):
MEPPLHATLH AKPRASCSKE PRAETLPRLC ARQQNVHRTS KRAAWLDFLC RVDILWAILF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -30.58 (PValue = 5.932078e-02)
Components of the Score Function:
Profile Score...............................................: -8.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.35
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.60
Term 9 Volume Limitation [3..8]...........................: -2.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.01
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1460 (length 60 amino acids):
MMPMLLLRGA MQRPRAALLA VALTLCLLLA PVRGADSPFT QYKAVQKANT RKFLQAFVDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -63.17 (PValue = 4.984364e-01)
Components of the Score Function:
Profile Score...............................................: -19.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1400 (length 60 amino acids):
MGALPSHETH ERGLYSHRHG RNRRNEIILI PLTTSFFPSP DCPLFQHLYN SRYRRTAKYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -96.90 (PValue = 9.428466e-01)
Components of the Score Function:
Profile Score...............................................: -25.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.43
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.56
Term 14 Hydrophobicity of Tail [26..end]...................: -3.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1390 (length 60 amino acids):
MRSETQKNRS HYTGGPVSRA LFGSHAVDLS TDNSQTGSRP DTRSESHDDG NARWNLHGGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -59.20 (PValue = 4.186146e-01)
Components of the Score Function:
Profile Score...............................................: -7.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.67
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1240 (length 60 amino acids):
MQLFSLPKQT KKNAASPKKA TSGHPVPDNS HKNAFGQDDK TAGTLHLHHS PSSHSRNRQG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -87.12 (PValue = 8.773342e-01)
Components of the Score Function:
Profile Score...............................................: -15.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.56
Term 5 Volume Compensation (-1, 2)........................: -0.86
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.87
Term 14 Hydrophobicity of Tail [26..end]...................: -4.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -60.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1190 (length 60 amino acids):
MTSIATHSVA PPTAKDGAEG PIWHIYEGRT YRVPMSFVRR HPNGQKLLLP YANRDITQAY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -72.00 (PValue = 6.709792e-01)
Components of the Score Function:
Profile Score...............................................: -13.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.53
Term 4 Volume Compensation (-1, 1, 2).....................: -5.84
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.00
Term 14 Hydrophobicity of Tail [26..end]...................: -2.78
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1140 (length 60 amino acids):
MSYYCSGGHC LKYATPGREP PDPQLFPHYM QNAQNLWLHF SEWWPHGDGG SCPAPPTKGV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -48.92 (PValue = 2.370705e-01)
Components of the Score Function:
Profile Score...............................................: 4.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.97
Term 14 Hydrophobicity of Tail [26..end]...................: -1.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1120 (length 60 amino acids):
MFAFYMTPTF DFPVRIRCRE TGDVLQAWKD SPQGYLNLPS TDKTRHLVFE FDNSQSLLTL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.16 (PValue = 3.415298e-01)
Components of the Score Function:
Profile Score...............................................: -15.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.82
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.63
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1070 (length 60 amino acids):
MPAHCPPNIH FLEEVTSTMD VARTMRATAG GKAFAVVAAE QTAGRGTGGR TWTSPKGNLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -53.94 (PValue = 3.194435e-01)
Components of the Score Function:
Profile Score...............................................: 3.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0890 (length 60 amino acids):
MEPKRSGNMA CVERERERDY WRHLERLNNQ RCRIDNTIPV SCAYVRPIGS MRRNPARAEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -84.68 (PValue = 8.535410e-01)
Components of the Score Function:
Profile Score...............................................: -0.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -3.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.91
Term 14 Hydrophobicity of Tail [26..end]...................: -4.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -72.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0850 (length 60 amino acids):
MSMQQDFVHP RQLDDMRAIH AAINSFSGVM TKMMMLMKEL GTTLEQVSHS FDALTSLTFT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.28 (PValue = 3.623488e-01)
Components of the Score Function:
Profile Score...............................................: -10.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.45
Term 4 Volume Compensation (-1, 1, 2).....................: -1.41
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0590 (length 60 amino acids):
MEPLYGKMAS FDMEALMPAQ KYGIKAAFLG IIFVSFGVYN SVVIPAIAAV VKGRIPERVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -35.13 (PValue = 8.707294e-02)
Components of the Score Function:
Profile Score...............................................: -10.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -1.17
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.19
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.80
Term 14 Hydrophobicity of Tail [26..end]...................: -2.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0540 (length 60 amino acids):
MVSSEALGEY VREYAASRLR DPVMASWVGG SLAFLATMYA TSSGRQLAKA MPPPPLRGIQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -38.09 (PValue = 1.102080e-01)
Components of the Score Function:
Profile Score...............................................: 5.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.55
Term 14 Hydrophobicity of Tail [26..end]...................: -1.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0255 (length 60 amino acids):
MCATIASLDA AVLSFGRAER CGTAPGKLAR SYQLFDHLIL ATAVSATGWA EHHQGVSGFN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.90 (PValue = 4.525793e-01)
Components of the Score Function:
Profile Score...............................................: -2.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.16
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1110 (length 60 amino acids):
MSTAVVSRPR VYVRIRPLND REVRDGKGEL ACRGDTRQQD LLFLKKDETL EQQVRFDQVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -77.06 (PValue = 7.556170e-01)
Components of the Score Function:
Profile Score...............................................: -8.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.53
Term 4 Volume Compensation (-1, 1, 2).....................: -2.32
Term 5 Volume Compensation (-1, 2)........................: -1.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -56.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1090 (length 60 amino acids):
MSHGRRMLEA QAQKERTSGT SEDCRLDDGH LRNGSRAFND DGTPVRPSRG GARPSGSDRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -70.77 (PValue = 6.484157e-01)
Components of the Score Function:
Profile Score...............................................: -7.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.62
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.10
Term 14 Hydrophobicity of Tail [26..end]...................: -3.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1060 (length 60 amino acids):
MVVRVRDCPA SQMQIDICYQ CFGNPDDGLP AVLLIGGLNM QLTAWDESFC ESLVYAGFYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.02 (PValue = 3.209585e-01)
Components of the Score Function:
Profile Score...............................................: -21.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.73
Term 4 Volume Compensation (-1, 1, 2).....................: -0.37
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0880 (length 60 amino acids):
MAAPSSENNA GTPLSYTNSA VEAFVADATD IRDLLFKYRA DAELLKHELS SFVHREIDEQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -100.40 (PValue = 9.574652e-01)
Components of the Score Function:
Profile Score...............................................: -19.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.60
Term 14 Hydrophobicity of Tail [26..end]...................: -3.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -65.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0810 (length 60 amino acids):
MQQELLLLTR RVAQLESTAD GLHGKLHEVH RAIGEVVLGQ RNTDLLVQQI ERRHLAGPVG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -70.75 (PValue = 6.480757e-01)
Components of the Score Function:
Profile Score...............................................: -14.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.25
Term 4 Volume Compensation (-1, 1, 2).....................: -3.10
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.58
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0680 (length 60 amino acids):
MLSTTPVHRA GLLSTLIANG ALHAAHLASV QTPAGALILS GCVFRCLAMP FTIYGDQCLH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -53.78 (PValue = 3.166399e-01)
Components of the Score Function:
Profile Score...............................................: -10.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.18
Term 4 Volume Compensation (-1, 1, 2).....................: -1.71
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.41
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0640 (length 60 amino acids):
MSASTTELFT NQGTLYQYAG EEGEHPYYKP LGDVDSFTIS LLKHKKTAGT AGSNNSCVEY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -66.29 (PValue = 5.614954e-01)
Components of the Score Function:
Profile Score...............................................: -4.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.80
Term 14 Hydrophobicity of Tail [26..end]...................: -3.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0733 (length 60 amino acids):
MKVHKRTNYI SNIISTVGKK SALKKMSDSA PGAEKVEKAV VESAKAESAA TDCITAIDVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -46.41 (PValue = 2.013843e-01)
Components of the Score Function:
Profile Score...............................................: 1.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0660 (length 60 amino acids):
MTPTRPSRIS LLAAPAPVPL DAQGHVCHAR AAATAPATVV SNAEEVTEAR GSCAPLHASR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -55.64 (PValue = 3.504152e-01)
Components of the Score Function:
Profile Score...............................................: -8.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0940 (length 60 amino acids):
MSHFGAGRSS AQPVPPIDSF VEVLPVAPQV ERRRGILRFY GLTDFAEGEW AGVELVGCEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.02 (PValue = 3.574654e-01)
Components of the Score Function:
Profile Score...............................................: -10.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.63
Term 4 Volume Compensation (-1, 1, 2).....................: -1.38
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.93
Term 14 Hydrophobicity of Tail [26..end]...................: -0.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0850 (length 60 amino acids):
MSAYHSSNPV EARRAECARL QAKYPGHAAV VVEAAEKAGS KVHFLALPRD ATVAELEAAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -57.19 (PValue = 3.795400e-01)
Components of the Score Function:
Profile Score...............................................: -11.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.33
Term 9 Volume Limitation [3..8]...........................: -1.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0540 (length 60 amino acids):
MAKTTLLVCA LLALVMCLAA TAVSAQQSLA CQMVWQAPSP NNSLLECLGN TDRIRSQWPY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -62.96 (PValue = 4.941596e-01)
Components of the Score Function:
Profile Score...............................................: -13.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.62
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.21
Term 14 Hydrophobicity of Tail [26..end]...................: -3.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0570 (length 60 amino acids):
MVCPFSCPPL PAPSLNSSHL SLPKKQRLTA RAHTPTHKMA KTTLLVCALL ALVMCLAATA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -22.10 (PValue = 2.695053e-02)
Components of the Score Function:
Profile Score...............................................: -8.12
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.08
Term 4 Volume Compensation (-1, 1, 2).....................: -4.22
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0560 (length 60 amino acids):
MQREVIKWVQ SLDLSAPIQN PKRDLATGHL AAEIVARYSG TKYLDLERLP MGAAAATKRD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -69.75 (PValue = 6.292358e-01)
Components of the Score Function:
Profile Score...............................................: -9.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -1.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0360 (length 60 amino acids):
MSSSNLVTDA YHSTESTINV LFSSPADANP VTDKQATKVP VVPIAASLFP ANAAVMIDDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -50.12 (PValue = 2.553811e-01)
Components of the Score Function:
Profile Score...............................................: -13.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.65
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.51
Term 14 Hydrophobicity of Tail [26..end]...................: -1.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.75
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0260 (length 60 amino acids):
MSLPPSRGGP QAVGTSAIEA EVQELLSREL SSRNADGDPD ATALLVEHIR RGNGGAVLEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -38.68 (PValue = 1.154261e-01)
Components of the Score Function:
Profile Score...............................................: -13.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.45
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0050 (length 60 amino acids):
MASSRKASNP HKSHRKPKRS WNVYVGRSLK AINAQMSMSH RTMKIVNSYV NDVMERICTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -74.17 (PValue = 7.090464e-01)
Components of the Score Function:
Profile Score...............................................: -31.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.26
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2430 (length 60 amino acids):
MNVADMPNTS AKLRESREPL SEVRISDQVV QSCLRHAFTT EEEEVMGLLL GRIEVQPFTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -45.25 (PValue = 1.860889e-01)
Components of the Score Function:
Profile Score...............................................: -17.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.11
Term 4 Volume Compensation (-1, 1, 2).....................: -4.26
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.10
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.60
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2350 (length 60 amino acids):
MHACTECFFP RVSYLSFLPV LPAGMSNPQE NDNDVPASME VPLSTSLFSR SADSNTVKHA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -54.44 (PValue = 3.283873e-01)
Components of the Score Function:
Profile Score...............................................: -6.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -0.88
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.02
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.34
Term 14 Hydrophobicity of Tail [26..end]...................: -2.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2320 (length 60 amino acids):
MPSRVTIRCL AAYTGDAEDA GGGLVPLFVG REDGTVERYD DMKDAELGIP TASFYAHRRA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -70.23 (PValue = 6.383402e-01)
Components of the Score Function:
Profile Score...............................................: -11.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.86
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.10
Term 14 Hydrophobicity of Tail [26..end]...................: -2.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2250 (length 60 amino acids):
MADYTCGTAT RHTDGAGSTS TLDDPGLLRR LVKSAKSAHS TLGRALDTNL SNQRFGGAEM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -64.29 (PValue = 5.211403e-01)
Components of the Score Function:
Profile Score...............................................: -10.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.89
Term 14 Hydrophobicity of Tail [26..end]...................: -2.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2120 (length 60 amino acids):
MRTASSATFG SDFSNTCHEG SILEVEAREE RVDPAGSGRH LPVPALRGGV TVGGTCHSSE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -49.28 (PValue = 2.424083e-01)
Components of the Score Function:
Profile Score...............................................: -4.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.83
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.42
Term 14 Hydrophobicity of Tail [26..end]...................: -3.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1770 (length 60 amino acids):
MNQCHEIIEA DKAYLEEVGM RNILQQFVAD AMESRPGNVY EYMMTWATKV QESSISLLKG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -56.72 (PValue = 3.706728e-01)
Components of the Score Function:
Profile Score...............................................: -18.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.84
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.35
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1740 (length 60 amino acids):
MGGALAASRV LRCFLLSKDA EALLQSVLEH HGAAEGPSVN VAADTLPPEQ GNKGEAPSFG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -62.60 (PValue = 4.868992e-01)
Components of the Score Function:
Profile Score...............................................: -12.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1730 (length 60 amino acids):
MLAHPILASE DDEEYVIRVI FCLPALLDAY FDAVETICAE PSPPPESKTR ADILYLTIQQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -38.62 (PValue = 1.148918e-01)
Components of the Score Function:
Profile Score...............................................: -12.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.19
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1400 (length 60 amino acids):
MGAGGVSPQS RGVASSFTTG GSSRAAATTT KANPRPQGGA PRAAGTSGAA AAAGTKPGAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -41.81 (PValue = 1.459426e-01)
Components of the Score Function:
Profile Score...............................................: -1.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.21
Term 14 Hydrophobicity of Tail [26..end]...................: -1.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1240 (length 60 amino acids):
MSSTNAIGID LGTTYSCVGV FKNEQVDIIA NDQGNRTTPS YVAFTETERL IGDAAKNQVA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -68.58 (PValue = 6.066635e-01)
Components of the Score Function:
Profile Score...............................................: -18.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.13
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2860 (length 60 amino acids):
MISVSRALLS PLRSQLQDIL CQPLPITEEG LLCALQVGAD LTVPLTIIGS CDDGDSEADV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -54.10 (PValue = 3.223815e-01)
Components of the Score Function:
Profile Score...............................................: -11.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.89
Term 5 Volume Compensation (-1, 2)........................: -3.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.57
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.19
Term 14 Hydrophobicity of Tail [26..end]...................: -2.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2850 (length 60 amino acids):
MPNLCVSCTF NPPTITLLGS TIREDTVRAM EAQLPLATST AVNPSKDPAK FIFLSNPDHW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -66.36 (PValue = 5.628253e-01)
Components of the Score Function:
Profile Score...............................................: -5.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.19
Term 14 Hydrophobicity of Tail [26..end]...................: -2.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.67
Your sequence length is too short for the GPI prediction algorithm!
As a minimum, 55 amino acids are required.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2490 (length 60 amino acids):
MFARRVCGSA AASAACLARH ESQKVQGDVI GVDLGTTYSC VATMDGDKAR VLENSEGFRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -63.63 (PValue = 5.078434e-01)
Components of the Score Function:
Profile Score...............................................: -16.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.09
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.88
Term 14 Hydrophobicity of Tail [26..end]...................: -4.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2330 (length 60 amino acids):
MPAPAVHTVF GVEDFKIDAR FLSHMAFLCS PDKPVETSTL IGSYAMCEIC VSETETADIM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -67.41 (PValue = 5.838290e-01)
Components of the Score Function:
Profile Score...............................................: -12.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.96
Term 4 Volume Compensation (-1, 1, 2).....................: -0.80
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -2.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2200 (length 60 amino acids):
MQLSRIPSYE EASVAGAEYS LSPMSPLAHL SKKIDVTKLK TKACRYFLLG VTCPFGDSCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -75.41 (PValue = 7.296860e-01)
Components of the Score Function:
Profile Score...............................................: -14.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.28
Term 4 Volume Compensation (-1, 1, 2).....................: -2.06
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.69
Term 14 Hydrophobicity of Tail [26..end]...................: -2.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2180 (length 60 amino acids):
MTSLQNLFVA KLPRNLTDAD LHQIFVQYNP TSAKVMLDAT TGKSKGFGFV LFASEDAGRT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -55.12 (PValue = 3.407354e-01)
Components of the Score Function:
Profile Score...............................................: -10.04
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.89
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.82
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2120 (length 60 amino acids):
MIARDPPQEG RLPDPSRLPY DDERFAEMLL EMEVNGVIDE TWQDAKKARM EDVKEIANIL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -56.36 (PValue = 3.637800e-01)
Components of the Score Function:
Profile Score...............................................: -16.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.56
Term 5 Volume Compensation (-1, 2)........................: -2.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.54
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2030 (length 60 amino acids):
MRNKTWLDRQ SIGTLLLYGG LARVVLLIYA AFHDYYFRVK YTDIDYMIVV DGARELLHGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -68.25 (PValue = 6.002405e-01)
Components of the Score Function:
Profile Score...............................................: -29.43
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.18
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -22.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1740 (length 60 amino acids):
MSFAKGTTPR KSPESKPRNG DEKTTDVTKE AVKRSSSRVL HVSVTDDTQI VSIPRDQEDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -93.94 (PValue = 9.273258e-01)
Components of the Score Function:
Profile Score...............................................: -15.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.63
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.09
Term 14 Hydrophobicity of Tail [26..end]...................: -3.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -40.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -62.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1640 (length 60 amino acids):
MASAVANVNA SAKPMTDKEI TRHRVMARLS EIRTQPLKQL PMTVFMMWMV GNEVSIFSIM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -53.39 (PValue = 3.097797e-01)
Components of the Score Function:
Profile Score...............................................: -9.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.85
Term 4 Volume Compensation (-1, 1, 2).....................: -4.35
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1625 (length 60 amino acids):
MASAVANVNA SAKPMTDKEI TRHRVMARLS EIRTQPLKQL PMTVFMMWMV GNEVSIFSIM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -53.39 (PValue = 3.097797e-01)
Components of the Score Function:
Profile Score...............................................: -9.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.85
Term 4 Volume Compensation (-1, 1, 2).....................: -4.35
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.46
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -0.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1310 (length 60 amino acids):
MVTERQVLKG GDGGGGDAAR CTGVTLCGAM TPAEAASHAT EWQNHRLPQV QAPSSSASVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -64.00 (PValue = 5.153520e-01)
Components of the Score Function:
Profile Score...............................................: -7.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1060 (length 60 amino acids):
MSSLTEGARA SHTSSKEAGY YRLQSPKHIN IDPCVYEIRT MRGSGPGGQG TNSSSNKVEL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -47.76 (PValue = 2.201207e-01)
Components of the Score Function:
Profile Score...............................................: -8.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.46
Term 14 Hydrophobicity of Tail [26..end]...................: -1.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.91
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0770 (length 60 amino acids):
MDAPEWTKDA QSIQGAKDYV RQASIVDFYE MICRNIFTHH PANLTEFCLR IVKDIMNGTE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -75.84 (PValue = 7.366413e-01)
Components of the Score Function:
Profile Score...............................................: -18.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -2.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.65
Term 14 Hydrophobicity of Tail [26..end]...................: -3.21
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0745 (length 60 amino acids):
MLLRRVRKCS SQARWVRWDG IKAPSVLNHA ADHSDPLNAV FDEIENCDTS VHAEKRESPK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -80.84 (PValue = 8.087356e-01)
Components of the Score Function:
Profile Score...............................................: -7.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.45
Term 5 Volume Compensation (-1, 2)........................: -0.21
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.54
Term 14 Hydrophobicity of Tail [26..end]...................: -4.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -61.76
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0735 (length 60 amino acids):
MGARFDHRVL IHDILVQYSL ASICTPTSTS LVCGFLFFFA SEHTPKDLHE RMHRQVSAHV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -79.09 (PValue = 7.852496e-01)
Components of the Score Function:
Profile Score...............................................: -20.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.42
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.95
Term 14 Hydrophobicity of Tail [26..end]...................: -1.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0700 (length 60 amino acids):
MSLVASQEGL TDLVPCNDQC GGDYTLYTFG QSEKEVTITA PLAPGTRGKS LRVDIKVRHL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -48.64 (PValue = 2.328184e-01)
Components of the Score Function:
Profile Score...............................................: -17.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0690 (length 60 amino acids):
MGKIHGSLAR AGKVKNQTPK VAKQEKPKQP RGRALKRLKY TRRFLSKTVK PGEKVHMNKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -94.54 (PValue = 9.307584e-01)
Components of the Score Function:
Profile Score...............................................: -24.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.14
Term 14 Hydrophobicity of Tail [26..end]...................: -4.73
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0550 (length 60 amino acids):
MSGGYIAVTV IFFVLALGVC LLTYHYYTKV SIKQIPLACA VWHVIALYMC MLPFPLLVVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -36.39 (PValue = 9.642852e-02)
Components of the Score Function:
Profile Score...............................................: -7.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.86
Term 9 Volume Limitation [3..8]...........................: -1.61
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0470 (length 60 amino acids):
MLSPQEVANT FVLYVPTYYV SFQCVASLLP DAIREEITGR GRLVNLFKKF PFIFDVLVVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -23.29 (PValue = 3.028783e-02)
Components of the Score Function:
Profile Score...............................................: -3.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.32
Term 9 Volume Limitation [3..8]...........................: -2.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.09
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0270 (length 60 amino acids):
MLRYVQDLWS AFFPTEAVFP LQVVGRSGAA VESREELEKA LTDTFLIFTY RDGFEAIPAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -55.63 (PValue = 3.502151e-01)
Components of the Score Function:
Profile Score...............................................: -7.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.49
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.40
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.2110 (length 60 amino acids):
MMRNTCLSLA GVSGMAVYAP HCRVDLEQWC KWTGNSWDKV SSVVGQSFRI TSHNENAYTM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -82.77 (PValue = 8.324045e-01)
Components of the Score Function:
Profile Score...............................................: -14.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.82
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -13.82
Term 14 Hydrophobicity of Tail [26..end]...................: -4.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1770 (length 60 amino acids):
MQPKMTAPLT MKDNNKCLSV RVGSTLEIHL EGNPTTGYTW TRVGFVGKEM LSDEHLEVTS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -58.33 (PValue = 4.015762e-01)
Components of the Score Function:
Profile Score...............................................: -13.37
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -28.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1390 (length 60 amino acids):
MADLCLGEDF SEELTCAVCL DSWKDPVELM PCGHIFCKAC ATGLKECPVC RDPIRSTKVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -71.16 (PValue = 6.556104e-01)
Components of the Score Function:
Profile Score...............................................: -11.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: -1.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.24
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1250 (length 60 amino acids):
MPACLAYYTG AMCFTIIQFF AWAFALVATP TAQFQTPGHG CYTMWGYRKF CGDVPYDLTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -68.60 (PValue = 6.071151e-01)
Components of the Score Function:
Profile Score...............................................: -17.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1200 (length 60 amino acids):
MEWADDVVNR PRRANAGNRL QELLTNGLDE EEEKALQALS DASSDTSFTL SSDEETVDEV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -62.04 (PValue = 4.755684e-01)
Components of the Score Function:
Profile Score...............................................: -13.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.77
Term 14 Hydrophobicity of Tail [26..end]...................: -2.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1020 (length 60 amino acids):
MPGPSSLKLS AALEQRILAA SSVLRLTPDA FLIRLLSQHY NTLGGLPRDL LRYILTFLDY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -40.11 (PValue = 1.286184e-01)
Components of the Score Function:
Profile Score...............................................: -7.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.28
Term 4 Volume Compensation (-1, 1, 2).....................: -4.75
Term 5 Volume Compensation (-1, 2)........................: -5.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.81
Term 14 Hydrophobicity of Tail [26..end]...................: -0.13
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.1010 (length 60 amino acids):
MSRAAAATRK GKRKGLSIDE KVVFVERWMA AHPHPYTLKE LQQLIPKHTP VIYQSVEECV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -62.66 (PValue = 4.880988e-01)
Components of the Score Function:
Profile Score...............................................: -12.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.26
Term 4 Volume Compensation (-1, 1, 2).....................: -1.82
Term 5 Volume Compensation (-1, 2)........................: -3.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.89
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0980 (length 60 amino acids):
MFATTSLPSS TSSWRHHVQN QEEDLVRELM QASNVDAVLA RMEGDHFRHL SPIMRKLTSF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -65.17 (PValue = 5.389878e-01)
Components of the Score Function:
Profile Score...............................................: -11.71
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.88
Term 9 Volume Limitation [3..8]...........................: -0.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0970 (length 60 amino acids):
MRDTDITFCL FPLGVGDADV TVYGEAPLLL TASASIKSIE TISSPSVIDL GGGPALCGTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -48.69 (PValue = 2.336273e-01)
Components of the Score Function:
Profile Score...............................................: -3.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.81
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0840 (length 60 amino acids):
MTAAAPSSLV KYETPVLLSE ALHKKSLASK RPVANNGKPQ PQSEDVLFSI LPPREFEKGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -51.81 (PValue = 2.828669e-01)
Components of the Score Function:
Profile Score...............................................: -9.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.83
Term 4 Volume Compensation (-1, 1, 2).....................: -0.40
Term 5 Volume Compensation (-1, 2)........................: -1.63
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.47
Term 14 Hydrophobicity of Tail [26..end]...................: -3.85
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0740 (length 60 amino acids):
MPNTQHARTP TRNVRGEAPV RHWLLVGHRN VFSDDPSPPS CAQAAQPKSP SGSVSKSKKK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -77.29 (PValue = 7.591864e-01)
Components of the Score Function:
Profile Score...............................................: 0.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.68
Term 4 Volume Compensation (-1, 1, 2).....................: -0.93
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.81
Term 14 Hydrophobicity of Tail [26..end]...................: -3.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -65.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0710 (length 60 amino acids):
MCAYASILVV SAVHLCFCYR SHTSQSMTPA KALRLSSLPL ATAWWRQHGL ADRLEGFRAC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -70.04 (PValue = 6.347940e-01)
Components of the Score Function:
Profile Score...............................................: -17.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.02
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0620 (length 60 amino acids):
MDVAHNRSLG FAGKEILFRK IEFERYRKPH VVEYPRSAVV LNPQHTRQLR DAMCTQRQGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -76.91 (PValue = 7.533829e-01)
Components of the Score Function:
Profile Score...............................................: -17.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.49
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.59
Term 14 Hydrophobicity of Tail [26..end]...................: -3.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0580 (length 60 amino acids):
MEKANQAQHS RAPGKQSRSV FLVGVAIMIV ILFVIGHMLA MRPITSAEDD MLSSACTHAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -77.57 (PValue = 7.632995e-01)
Components of the Score Function:
Profile Score...............................................: -12.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.13
Term 14 Hydrophobicity of Tail [26..end]...................: -2.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0230 (length 60 amino acids):
MEGPSDKLLR EPFQASLKRE RSSSYTTERG RPTSPHLRRL RPLTTSSSEG KGAADGDGEE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -64.38 (PValue = 5.230258e-01)
Components of the Score Function:
Profile Score...............................................: -4.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.89
Term 14 Hydrophobicity of Tail [26..end]...................: -2.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.49
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0160 (length 60 amino acids):
MTTLEKQLQS STLSKQCRAD LLNHVEEVET NSRRLPKKMI TLPDPNLPSA VTMPTDNSVK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -69.66 (PValue = 6.275278e-01)
Components of the Score Function:
Profile Score...............................................: -11.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.06
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.42
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.13
Term 14 Hydrophobicity of Tail [26..end]...................: -3.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0140 (length 60 amino acids):
MDDGARIAED VEKFLRAARS RETADCSRML KEKPELVNCV EAGGYAALHF AAFNGDAETV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -54.44 (PValue = 3.284340e-01)
Components of the Score Function:
Profile Score...............................................: -9.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.24
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.90
Term 14 Hydrophobicity of Tail [26..end]...................: -1.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.24.0110 (length 60 amino acids):
MFFDQRRVLT ENAPRRPYQN NASTASFECP LLKGLHYGQR KLMLSEVEFL VQISMHIKRR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -76.45 (PValue = 7.462933e-01)
Components of the Score Function:
Profile Score...............................................: -21.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.39
Term 4 Volume Compensation (-1, 1, 2).....................: -0.60
Term 5 Volume Compensation (-1, 2)........................: -2.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.15
Term 9 Volume Limitation [3..8]...........................: -1.69
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.55
Term 14 Hydrophobicity of Tail [26..end]...................: -2.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0885 (length 60 amino acids):
MCVSPSVPSA PLIHREDSAV ASSAPAATCA HGAHEHARTP TARRRPDSTQ RPSCALCCEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -62.58 (PValue = 4.864954e-01)
Components of the Score Function:
Profile Score...............................................: -0.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.26
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.66
Term 14 Hydrophobicity of Tail [26..end]...................: -1.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0880 (length 60 amino acids):
MCVSPSVPSA PLIHREDSAV ASSAPAATCA HGAHEHARTP TARRRPDSTQ RPSCALCCEA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -62.58 (PValue = 4.864954e-01)
Components of the Score Function:
Profile Score...............................................: -0.21
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.26
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.66
Term 14 Hydrophobicity of Tail [26..end]...................: -1.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -50.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0840 (length 60 amino acids):
MLRCAPSKLF RATPLLRVWA AEEDDASAPR TTFRNVRPGR LLRLWRQMRH RAWMLYAWDE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -101.35 (PValue = 9.608522e-01)
Components of the Score Function:
Profile Score...............................................: -15.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.55
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -32.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -74.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1750 (length 60 amino acids):
MPGMKLDFLK NTAQRVAMGK SLPLKQVEAI VLYGKPAQRA KVVQKLLPAV YGLSLNKTTH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -30.34 (PValue = 5.807535e-02)
Components of the Score Function:
Profile Score...............................................: -10.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.82
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -3.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1700 (length 60 amino acids):
MQDAMKAAAS ATPDRWLAAA MMSPIMPTGE NVSDTMPIHS ADLGWTPLID SAASTGGAVH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -47.20 (PValue = 2.121079e-01)
Components of the Score Function:
Profile Score...............................................: -2.36
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1680 (length 60 amino acids):
MEAPTDNDSM QAGPVVVGHA DGVLTMPSED FASLHLQPIQ DDTWIRNAEI VHMENFVETE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -93.21 (PValue = 9.230382e-01)
Components of the Score Function:
Profile Score...............................................: -23.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.91
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.57
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.70
Term 14 Hydrophobicity of Tail [26..end]...................: -3.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1640 (length 60 amino acids):
MSSYRSDVDP FKEIRVLPRE AAQLRHHLSR INHALQTKYF VAAELSELAL QPDRSDEFLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -65.05 (PValue = 5.365360e-01)
Components of the Score Function:
Profile Score...............................................: -13.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.00
Term 4 Volume Compensation (-1, 1, 2).....................: -1.15
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.05
Term 14 Hydrophobicity of Tail [26..end]...................: -1.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1100 (length 60 amino acids):
MDAILDFSKP VDVQRFEQVV TAMSSGSPAE IMEAQEVLTR FKANPEAFFR VDKLLTESRN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -70.51 (PValue = 6.436122e-01)
Components of the Score Function:
Profile Score...............................................: -11.73
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.31
Term 14 Hydrophobicity of Tail [26..end]...................: -1.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.1090 (length 60 amino acids):
MDGFRLYMEG ISLPEGSMRR ANAELIGAIN SPDPMVQHSG LQMLCDQLTM SSFISPSTMT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -50.70 (PValue = 2.645665e-01)
Components of the Score Function:
Profile Score...............................................: -9.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.27
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.75
Term 14 Hydrophobicity of Tail [26..end]...................: -2.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.45
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.32.0360 (length 60 amino acids):
MQSTYPKQNC GCDFCCSRRS VNAKKLAASQ AAFQRSGTMQ RNGCNCCCHS SGPGGVSSFD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -61.36 (PValue = 4.618488e-01)
Components of the Score Function:
Profile Score...............................................: -10.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -2.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1290 (length 60 amino acids):
MPKLSSSKAK AAAAAASGPP ALYGEDLSGP PLVVEVNAPS AWTATTGADA SSNEECLTGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -67.96 (PValue = 5.945593e-01)
Components of the Score Function:
Profile Score...............................................: -3.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.1270 (length 60 amino acids):
MVVADPSWPT PIVPQVDEGK WALLHPMKPS LVALVPGAAQ GATTVVLGHP LDTAKVRMQS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -55.46 (PValue = 3.469633e-01)
Components of the Score Function:
Profile Score...............................................: -7.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.04
Term 14 Hydrophobicity of Tail [26..end]...................: -2.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0930 (length 60 amino acids):
MADQLSNEQI SEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTEAELQ DMINEVDQDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -78.03 (PValue = 7.701435e-01)
Components of the Score Function:
Profile Score...............................................: -20.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.61
Term 4 Volume Compensation (-1, 1, 2).....................: -1.06
Term 5 Volume Compensation (-1, 2)........................: -0.66
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0890 (length 60 amino acids):
MGKVKAFLGS LAAAIRSTVS CTIPGDNVID DEDEDNFMAD NAKDGGASES GQGAFVEIDL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -29.81 (PValue = 5.545011e-02)
Components of the Score Function:
Profile Score...............................................: -0.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.12
Term 14 Hydrophobicity of Tail [26..end]...................: -0.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.33
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0510 (length 60 amino acids):
MSSAIVLVGS RQVIPLASRL IVGIRLQGTI GFVDPASPYV VKPRPYASYL ATTLRRLQCA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -40.13 (PValue = 1.288617e-01)
Components of the Score Function:
Profile Score...............................................: -6.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.47
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -21.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0367 (length 60 amino acids):
MEGNFYVSDV VINRELKSKY GMAYSKCPNE SKRYGQCVEA GQINRSLQRD SCAEERHALR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -85.42 (PValue = 8.611222e-01)
Components of the Score Function:
Profile Score...............................................: -20.56
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.74
Term 4 Volume Compensation (-1, 1, 2).....................: -0.39
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.09.0270 (length 60 amino acids):
MHPHEHHYGA APLPAPEQEQ PLGHYFSVTY AELLKAHVLD VHLPNILIGI SASIEVPLVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -44.09 (PValue = 1.717437e-01)
Components of the Score Function:
Profile Score...............................................: -16.77
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.93
Term 4 Volume Compensation (-1, 1, 2).....................: -4.03
Term 5 Volume Compensation (-1, 2)........................: -2.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.42
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -11.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1580 (length 60 amino acids):
MADSGDCETA RVTVSVRVRP KLAHPLTPLQ QSERYEKVVC IPSSDNSLRF ADCRATKGTR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -63.20 (PValue = 4.991644e-01)
Components of the Score Function:
Profile Score...............................................: -12.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: -0.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.13
Term 14 Hydrophobicity of Tail [26..end]...................: -3.38
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.13
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1570 (length 60 amino acids):
MLRWDWPQTW SLENREAIRV ALETAIRGAM AKGESKVVRG LVHVELPEIG STPPQVMLTG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -36.70 (PValue = 9.879851e-02)
Components of the Score Function:
Profile Score...............................................: -7.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.45
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -5.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1530 (length 60 amino acids):
MCRMNIEATI KCACSVLLVL FLVFTHEAPK TTAGPAVDFD NPVKPLIVLD TTKLDYGYCH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -40.66 (PValue = 1.340516e-01)
Components of the Score Function:
Profile Score...............................................: -10.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.60
Term 14 Hydrophobicity of Tail [26..end]...................: -2.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.94
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1290 (length 60 amino acids):
MNNEVKPSDH ESSPAAPSVH ATECQNSNTN GTEVSPSSSS SFALEYGLDE NNGELFSASD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.99 (PValue = 3.757371e-01)
Components of the Score Function:
Profile Score...............................................: -11.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.51
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.65
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1280 (length 60 amino acids):
MGIQIPWLFV CVSTVPVFMI YTKTKRMDAR EMHEIQMRVK YHSEYWKKGN VFVKEFQDKV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -90.72 (PValue = 9.064736e-01)
Components of the Score Function:
Profile Score...............................................: -19.00
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.09
Term 4 Volume Compensation (-1, 1, 2).....................: -2.56
Term 5 Volume Compensation (-1, 2)........................: -2.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.38
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.94
Term 14 Hydrophobicity of Tail [26..end]...................: -2.62
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -55.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1220 (length 60 amino acids):
MRDAAERRHS SVELQRPQSQ QRQPEEHHHQ QHEDAAHNQR HGSRTTSGGG AALEEAASFQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -44.34 (PValue = 1.748737e-01)
Components of the Score Function:
Profile Score...............................................: -1.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: -0.68
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.71
Term 14 Hydrophobicity of Tail [26..end]...................: -1.20
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.09
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.16.1060 (length 60 amino acids):
MRFLRFRESR GAAPCAAHDS ASVVVPTVGS HRLRSASWYA RILWQWSSSL RSSSCRCCVS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -56.86 (PValue = 3.732791e-01)
Components of the Score Function:
Profile Score...............................................: 0.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.18
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.58
Term 14 Hydrophobicity of Tail [26..end]...................: -2.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -45.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2720 (length 60 amino acids):
MVTPLGVTAV DTWAGVCRGQ SGTRPLIEAP HFLPGFVEND KMLSPQQKAA ALEKLVAALP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -23.27 (PValue = 3.024238e-02)
Components of the Score Function:
Profile Score...............................................: -7.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.96
Term 4 Volume Compensation (-1, 1, 2).....................: -2.58
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.30
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2700 (length 60 amino acids):
MLTNRTLTEE QTIIRRHFTD FFESERYEEK YHARIQAMIV AGKARLLLDI GDFLDYVPIS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -52.95 (PValue = 3.020569e-01)
Components of the Score Function:
Profile Score...............................................: -27.48
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.66
Term 4 Volume Compensation (-1, 1, 2).....................: -2.38
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.09
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2650 (length 60 amino acids):
MSAFNAPPPP DATNSIRGSV KQIKFDRQLR LWGADGQAAL EAAHVVALGV TVAISEALKS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -20.74 (PValue = 2.351755e-02)
Components of the Score Function:
Profile Score...............................................: -6.98
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.33
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.24
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.66
Term 14 Hydrophobicity of Tail [26..end]...................: -0.53
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2630 (length 60 amino acids):
MHKSSSSRTS VQHNKPVKVT SSTSREEVRK RPQDMRAEVE GVIHVLDGGI NRTPLPLQQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -53.61 (PValue = 3.137092e-01)
Components of the Score Function:
Profile Score...............................................: -23.70
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.88
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.36
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.07
Term 14 Hydrophobicity of Tail [26..end]...................: -1.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2585 (length 60 amino acids):
MRCSASFLFS DTPPASAGSA SDQRQHSLRP PPLATGHLDR EGQTGLDVRR MCPSVDRPSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -73.90 (PValue = 7.045242e-01)
Components of the Score Function:
Profile Score...............................................: -13.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -1.59
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.75
Term 14 Hydrophobicity of Tail [26..end]...................: -3.11
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2560 (length 60 amino acids):
MSESSRGASQ EADLSRAQSP THSRDQSAEP NTGYEEGRIT VSVRVRPLNA RETKLNSGSC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -73.89 (PValue = 7.043222e-01)
Components of the Score Function:
Profile Score...............................................: -14.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.81
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.10
Term 14 Hydrophobicity of Tail [26..end]...................: -1.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2470 (length 60 amino acids):
MSVKSAEAVP TSGGGTALSS AAARNVRALR YGSLAILGGY VVVTFYKIGL IARILPVALN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -29.89 (PValue = 5.584092e-02)
Components of the Score Function:
Profile Score...............................................: -9.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.62
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2000 (length 60 amino acids):
MLIRGSFTLE KAESACQWYY RIGFFGLPWL WAVLWLFFRH YEDESESIRW YVERAKRYSI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -77.45 (PValue = 7.614843e-01)
Components of the Score Function:
Profile Score...............................................: -10.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.48
Term 4 Volume Compensation (-1, 1, 2).....................: -0.67
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.58
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.01
Term 14 Hydrophobicity of Tail [26..end]...................: -2.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1920 (length 60 amino acids):
MNILLPLTIL IVSWSLDSTD PDVQRRIFFI FVIVHTAIMC MALYLLFEIW RCDDHTLIQV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -79.56 (PValue = 7.917764e-01)
Components of the Score Function:
Profile Score...............................................: -29.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -8.54
Term 4 Volume Compensation (-1, 1, 2).....................: -5.76
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1910 (length 60 amino acids):
MKRGAKRSSR DGEDVPGTRA RTKDAEEVRK EEERRQRELE EAKRQAELED DDSWEDDDGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -115.16 (PValue = 9.905206e-01)
Components of the Score Function:
Profile Score...............................................: -29.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.12
Term 4 Volume Compensation (-1, 1, 2).....................: -1.24
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.93
Term 14 Hydrophobicity of Tail [26..end]...................: -5.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -69.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1890 (length 60 amino acids):
MVCPAGSAAA ASAAAGHLRG DGPSTVLRLF SFTRGEVGEL IDELVTAEAC GVVWVGNRHL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -50.26 (PValue = 2.575994e-01)
Components of the Score Function:
Profile Score...............................................: -9.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.86
Term 4 Volume Compensation (-1, 1, 2).....................: -6.27
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.55
Term 14 Hydrophobicity of Tail [26..end]...................: -0.69
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1730 (length 60 amino acids):
MGTPRLTALI SRCRKPIFTA AEDVALTSAA LLDLTLYLDA RETRECLVPL KKFARHSPET
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -81.08 (PValue = 8.118808e-01)
Components of the Score Function:
Profile Score...............................................: -9.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -12.42
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.76
Term 14 Hydrophobicity of Tail [26..end]...................: -3.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -59.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1700 (length 60 amino acids):
MAAAIARRVR IRQDLHNTPA FERDMNDVAA QDLYEQILLS SIRSGSDPNA KAVVEVYEGY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -52.84 (PValue = 3.002222e-01)
Components of the Score Function:
Profile Score...............................................: -6.45
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1220 (length 60 amino acids):
MSTWASRLSS SKSVSPTSGT ANRGAATLRD FSSVSDTASP TSMVSGGGAG ADVGAGSRNA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -49.58 (PValue = 2.471107e-01)
Components of the Score Function:
Profile Score...............................................: -0.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.15
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.33
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.56
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.1000 (length 60 amino acids):
MEKQRQQLLQ TSSQPGAAAD AQSTAPTSSG VTSAWDQKQL SADDNIRLVF LFTLAVPTFA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -21.67 (PValue = 2.581432e-02)
Components of the Score Function:
Profile Score...............................................: 0.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -10.21
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0819 (length 60 amino acids):
MREIVSCQAG QCGNQIGSKF WEVIADEHGV DPTGSYQGDS DLQLERINVY FDESAGGRYV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -53.83 (PValue = 3.175109e-01)
Components of the Score Function:
Profile Score...............................................: -6.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.25
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.60
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0680 (length 60 amino acids):
MWRGNWEFNG PLGVLGIMIT SHVLIYYFYV CIELFQGTII YPGHPMLKGE KMQKVFFSFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -47.79 (PValue = 2.204233e-01)
Components of the Score Function:
Profile Score...............................................: -9.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.04
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.52
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.28
Term 14 Hydrophobicity of Tail [26..end]...................: -0.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0620 (length 60 amino acids):
MNIAIANIAP TRLKQGSGEA VLAVLSALVN AALSSTGYGF QQIDYGQVER YDELAAVADA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -68.21 (PValue = 5.994061e-01)
Components of the Score Function:
Profile Score...............................................: -17.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.35
Term 4 Volume Compensation (-1, 1, 2).....................: -2.13
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0585 (length 60 amino acids):
MLNGVNDILT PWTAPRILQI MEATSASRNA SGCAPRGGIA TDDAADTESL LRLSNQLPDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -32.66 (PValue = 7.092254e-02)
Components of the Score Function:
Profile Score...............................................: -5.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.34
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.08
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0323 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0312 (length 60 amino acids):
MTETFAFQAE INQLMSLIIN TFYSNKEIFL RELISNASDA CDKIRYQSLT DPSVLGESPR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -55.45 (PValue = 3.468239e-01)
Components of the Score Function:
Profile Score...............................................: -12.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.57
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0290 (length 60 amino acids):
MTSANMSRKE QLSNRKSTTE ANVDLPLIAA AANSPSTTLK KGSSVPELPT SLDEDEEEDS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -115.24 (PValue = 9.906116e-01)
Components of the Score Function:
Profile Score...............................................: -20.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.55
Term 4 Volume Compensation (-1, 1, 2).....................: -0.85
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -20.21
Term 14 Hydrophobicity of Tail [26..end]...................: -6.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -78.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0250 (length 60 amino acids):
MKAGQRVQFS LTKPRVEKVI VCLGLREGLD ARESRGAVAT RVSQHLLLQC RPSPSDVHNP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -73.56 (PValue = 6.985813e-01)
Components of the Score Function:
Profile Score...............................................: -15.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.63
Term 14 Hydrophobicity of Tail [26..end]...................: -3.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0235 (length 60 amino acids):
MEANGAGTPE ERAGQLRWIA DHLWSDTPHG AVHRAVEAQP QSVWLQLWHR AIADGARRPG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -67.74 (PValue = 5.902223e-01)
Components of the Score Function:
Profile Score...............................................: -11.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.24
Term 4 Volume Compensation (-1, 1, 2).....................: -0.41
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.77
Term 14 Hydrophobicity of Tail [26..end]...................: -2.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0210 (length 60 amino acids):
MSLTAEDVKQ IIAWFIGIPP AIFYVALAVV CRLHHRWIAF AFSAASALTL CVWFAMNCLS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 27 had the best score.
Total Score.................................................: -43.78 (PValue = 1.680608e-01)
Components of the Score Function:
Profile Score...............................................: -14.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.73
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.23
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.18
Term 14 Hydrophobicity of Tail [26..end]...................: -1.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.0160 (length 60 amino acids):
MALVAAVILF AISFLGCITV FFIAPSFTTS LATRIEKSLD QVVSETEMST LPTSWIPHVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -44.50 (PValue = 1.768238e-01)
Components of the Score Function:
Profile Score...............................................: -4.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.94
Term 4 Volume Compensation (-1, 1, 2).....................: -1.27
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1210 (length 60 amino acids):
MEPHMTSLVL RRDLSLEVPK LLIGAVQPYQ TLAGPALTTS FLHQPDLLPF QRTAFSHAAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -55.50 (PValue = 3.478167e-01)
Components of the Score Function:
Profile Score...............................................: -8.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.79
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.43
Term 14 Hydrophobicity of Tail [26..end]...................: -0.86
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1180 (length 60 amino acids):
MEPNADEPKK TSSVRQLLRQ QRELQEMRKF GLAPLAVDTE THQEISPNIP EFISRAPWYY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -76.19 (PValue = 7.421621e-01)
Components of the Score Function:
Profile Score...............................................: -21.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.35
Term 4 Volume Compensation (-1, 1, 2).....................: -1.95
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.40
Term 14 Hydrophobicity of Tail [26..end]...................: -2.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1160 (length 60 amino acids):
MLRTTRLRRI GVHIPSAQEL DDQLLVNRLR KSRPKSVFSL KALTAGRAQS FVAAGGIVLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -24.06 (PValue = 3.263027e-02)
Components of the Score Function:
Profile Score...............................................: 0.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.02
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.72
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.1020 (length 60 amino acids):
MATSRAALCA VAVVCVVLAA ACAPARAIYV GTPAAALFEE FKRTYQRAYG TLTEEQQRLA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -62.01 (PValue = 4.749161e-01)
Components of the Score Function:
Profile Score...............................................: -10.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.49
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.44
Term 14 Hydrophobicity of Tail [26..end]...................: -2.45
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -47.79
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0880 (length 60 amino acids):
MHSVVPMSSY IHPTQVSIGA APRMAVQEMH PDAKRKGRRV VATMELKPGN AIFAAPPDIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -58.13 (PValue = 3.976518e-01)
Components of the Score Function:
Profile Score...............................................: -8.52
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.52
Term 4 Volume Compensation (-1, 1, 2).....................: -2.17
Term 5 Volume Compensation (-1, 2)........................: -2.04
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.60
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0830 (length 60 amino acids):
MACRINLLLY VISQFLAFLF VLVGTPIDMF RPHNTSRIGN TPCLTLWGGK EECYSTKYDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -83.68 (PValue = 8.427278e-01)
Components of the Score Function:
Profile Score...............................................: -19.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.63
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.14
Term 14 Hydrophobicity of Tail [26..end]...................: -3.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -48.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0620 (length 60 amino acids):
MGILPSRESH EYPGAFHFAL SGSHAMAILP LTEHFFPSVD SLAFRQLYAG RDMQSAKYNF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -83.01 (PValue = 8.352044e-01)
Components of the Score Function:
Profile Score...............................................: -16.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.47
Term 4 Volume Compensation (-1, 1, 2).....................: -1.21
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -12.16
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0410 (length 60 amino acids):
MALSPTAYVS PGCSAQCRQC VSAKPDSFAF ASVQSISLYR VSTANVTIPT SASSTQAQAQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -47.44 (PValue = 2.155596e-01)
Components of the Score Function:
Profile Score...............................................: -8.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.02
Term 14 Hydrophobicity of Tail [26..end]...................: -2.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0140 (length 60 amino acids):
MSVEENVTSA VADTFRTCSE FIGAVSAREM PDNPSVQLCI LSIGFDVESV IAQLLHQRMA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -47.13 (PValue = 2.111130e-01)
Components of the Score Function:
Profile Score...............................................: -8.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -5.48
Term 9 Volume Limitation [3..8]...........................: -0.75
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.63
Term 14 Hydrophobicity of Tail [26..end]...................: -0.92
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0130 (length 60 amino acids):
MLSMFKNKKG FSVLFHGEEE ARESDRVTVS SALPRHSAQL RDTAARPKRS EVAQHQCQRC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -91.96 (PValue = 9.150519e-01)
Components of the Score Function:
Profile Score...............................................: -4.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.12
Term 14 Hydrophobicity of Tail [26..end]...................: -4.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -36.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -75.11
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0120 (length 60 amino acids):
MMFRGTSCAL ARSFRANLKY PSLVSYNKLP WEVVSHDSTK LHMHLAPNYE QLLTLAAVTD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -50.94 (PValue = 2.684407e-01)
Components of the Score Function:
Profile Score...............................................: -11.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -0.62
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.01
Term 9 Volume Limitation [3..8]...........................: -2.36
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.31
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.08.0060 (length 60 amino acids):
MAHIHVCRHG QDMDNVRGIL NGHRDQPLSE LGRRQAAAVA DKIKESGVNY AAIYSSPLQR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -57.68 (PValue = 3.890731e-01)
Components of the Score Function:
Profile Score...............................................: -15.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.42
Term 14 Hydrophobicity of Tail [26..end]...................: -1.28
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.15
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1870 (length 60 amino acids):
MPKRQRSDEK AAHHVELSVE SGRRFDAYIR GWMQGTVEQP LLRPSLLPPL TPLPTLAGPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -45.38 (PValue = 1.877876e-01)
Components of the Score Function:
Profile Score...............................................: -22.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.16
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.12
Term 9 Volume Limitation [3..8]...........................: -1.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.54
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1590 (length 60 amino acids):
MFALHTHVVF SSSFPSFLVS DGEAVSDDDH PGACVMKRGV SWVERLPREL LLNVFIDVIR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -33.50 (PValue = 7.613951e-02)
Components of the Score Function:
Profile Score...............................................: -10.10
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.85
Term 4 Volume Compensation (-1, 1, 2).....................: -2.14
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.51
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.21
Term 14 Hydrophobicity of Tail [26..end]...................: -0.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -7.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1430 (length 60 amino acids):
MFHISRAVRC NALATAIAGR TSLSDAIRQV QKVWNLDFKD GPVITSTLAF NDEPDPAAPI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -68.98 (PValue = 6.145574e-01)
Components of the Score Function:
Profile Score...............................................: -3.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.05
Term 4 Volume Compensation (-1, 1, 2).....................: -1.41
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1290 (length 60 amino acids):
MASNVNEESH ALYGAVVVRL VDRVMLCKTP SAPMDGFTIP STAWADLVSR CSAPHFRTSA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -56.47 (PValue = 3.658741e-01)
Components of the Score Function:
Profile Score...............................................: -9.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -0.88
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.22
Term 14 Hydrophobicity of Tail [26..end]...................: -2.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1270 (length 60 amino acids):
MAYGGPAPAN PHLAALAKDV HRITGNISGP FRKGEYTMVL QQFDMLMATS AVEEVAAMAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -63.52 (PValue = 5.055968e-01)
Components of the Score Function:
Profile Score...............................................: -7.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.42
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1260 (length 60 amino acids):
MSSTLVAVYE QACSDAAVLP NSALARCFAA TEQAMLLQVL SLSTNLIGPR GLVALLPVLR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -10.66 (PValue = 7.610504e-03)
Components of the Score Function:
Profile Score...............................................: -5.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.07
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.77
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.1200 (length 60 amino acids):
MSLIGGASHA RLIAVRPPLV NVCRAPSGVS ACVTFCIFAP HHWQHRAFVS VSTTARLLEP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -56.99 (PValue = 3.756845e-01)
Components of the Score Function:
Profile Score...............................................: -11.59
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.24
Term 4 Volume Compensation (-1, 1, 2).....................: -4.43
Term 5 Volume Compensation (-1, 2)........................: -4.77
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0915 (length 60 amino acids):
MATPRSAKKA ARKSSTKSAK AGLIFPVGRV GGMMRRGQYA RRIGSSGAVY LAAVLEYLTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -26.95 (PValue = 4.284043e-02)
Components of the Score Function:
Profile Score...............................................: 8.54
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.13
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.35
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -23.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0910 (length 60 amino acids):
MPAAAAAAAS SLAQRLAQLG QRFDVIESGL RHLQQQQQPL LRHAAPGGAA AGAASSDASF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -40.33 (PValue = 1.307945e-01)
Components of the Score Function:
Profile Score...............................................: -2.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.38
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -1.98
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.44
Term 14 Hydrophobicity of Tail [26..end]...................: -1.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0891 (length 60 amino acids):
MVALTAPPPR PEETIPNLDE VEVAFRELLR QGASLDMPQV AAAQNALQKV LREHTRLLTY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -50.78 (PValue = 2.658663e-01)
Components of the Score Function:
Profile Score...............................................: -6.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.39
Term 5 Volume Compensation (-1, 2)........................: -2.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.05
Term 14 Hydrophobicity of Tail [26..end]...................: -0.99
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0885 (length 60 amino acids):
MHTAHSAEMA AGAEEEEAWE GGATMPYDPG MPGALRPLHR PPPPMHDNPM SNCRGATLWP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -57.68 (PValue = 3.889198e-01)
Components of the Score Function:
Profile Score...............................................: -2.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.09
Term 4 Volume Compensation (-1, 1, 2).....................: -1.51
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -1.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.19
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0880 (length 60 amino acids):
MSTYESLSTV IVSCGSSSGG SSNGDGASEA ALHHHRRPDS VARTMAEHAD DGIDGALHIA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -49.13 (PValue = 2.401332e-01)
Components of the Score Function:
Profile Score...............................................: -15.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -17.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0875 (length 60 amino acids):
MSTPKTSPRH RGRDGKSDNK SGGTAAGGSK PSTPSGAATA ARGGGGIGFS YHPIHNLQFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -26.53 (PValue = 4.123665e-02)
Components of the Score Function:
Profile Score...............................................: 0.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.84
Term 14 Hydrophobicity of Tail [26..end]...................: -0.33
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0853 (length 60 amino acids):
MLNDLPRWPR YRPIRVIGQG GFGTVYLCVD TEPASPMYEQ EVAVKAVSLG ALCDEEVLMV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -40.48 (PValue = 1.322782e-01)
Components of the Score Function:
Profile Score...............................................: -7.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.56
Term 4 Volume Compensation (-1, 1, 2).....................: -0.78
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.48
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0840 (length 60 amino acids):
MPPKISAKSK QQPKQQGGNK KGKGSNDDGD DFDAMLAAAV NASKADAAKN HSNNHQGKRS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -79.15 (PValue = 7.861950e-01)
Components of the Score Function:
Profile Score...............................................: -9.75
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.96
Term 14 Hydrophobicity of Tail [26..end]...................: -5.15
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0823 (length 60 amino acids):
MEPKKASSAR GNYVRLGKNA DVIYKEADVI GRGQFGIVYR GLIPASGTVV AVKLLQNVPM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -5.22 (PValue = 3.701471e-03)
Components of the Score Function:
Profile Score...............................................: 0.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.75
Term 4 Volume Compensation (-1, 1, 2).....................: -1.97
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.05
Term 9 Volume Limitation [3..8]...........................: -0.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.10
Term 14 Hydrophobicity of Tail [26..end]...................: -0.56
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -5.37
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.21.0725 (length 60 amino acids):
MHATYLQRVT RHFCEDKGKE FDIAAEVRHA SQATDVRHLV PLTKAGIQHF STFLPAVKNK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -63.28 (PValue = 5.006516e-01)
Components of the Score Function:
Profile Score...............................................: -8.82
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.71
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.65
Term 14 Hydrophobicity of Tail [26..end]...................: -1.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0860 (length 60 amino acids):
MPLGDVRDAS LRSPTAATTS VASFWGDSHH DRGAATAAAS TKSPSTFPTT AALAPLTSST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -24.18 (PValue = 3.302678e-02)
Components of the Score Function:
Profile Score...............................................: 3.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.68
Term 4 Volume Compensation (-1, 1, 2).....................: -0.93
Term 5 Volume Compensation (-1, 2)........................: -0.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.45
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -27.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.07.0580 (length 60 amino acids):
MEASPASSPR SPALTTKTSQ LPFTAPEALP TAVEEVSEAV VSAAVAAHQT ASSSYAQDDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -72.80 (PValue = 6.853090e-01)
Components of the Score Function:
Profile Score...............................................: -7.09
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.49
Term 14 Hydrophobicity of Tail [26..end]...................: -3.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -53.71
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1320 (length 60 amino acids):
MVIMWSTHVT LLYLIEINDG FEQAYWLQYF APTSKKVAWA VLAEVRIPLW KQRMRWSVAF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -92.51 (PValue = 9.186638e-01)
Components of the Score Function:
Profile Score...............................................: -20.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -6.44
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.15
Term 14 Hydrophobicity of Tail [26..end]...................: -2.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -28.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -55.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1290 (length 60 amino acids):
MTFCGFGCVS TSEVGIIENC GKFDRTADPG CFCIVPCVES VRGVVSLKVA ISTVRVETKT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -33.83 (PValue = 7.822439e-02)
Components of the Score Function:
Profile Score...............................................: -12.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.92
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -9.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1270 (length 60 amino acids):
MADYNAAGAD TAVVDDNVPP GITTKQDEII QYVAKYVVAS CDGARYQDKV RTRTKHNPYF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -86.59 (PValue = 8.724530e-01)
Components of the Score Function:
Profile Score...............................................: -13.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -15.19
Term 14 Hydrophobicity of Tail [26..end]...................: -4.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -61.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1180 (length 60 amino acids):
MSDGRSFWFS GLLRHDNHER SELRGGDHSD SSDNSDRAAE VFYDHRSGLL QHDPTDPSTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -77.24 (PValue = 7.583266e-01)
Components of the Score Function:
Profile Score...............................................: -1.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.48
Term 4 Volume Compensation (-1, 1, 2).....................: -1.96
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.58
Term 14 Hydrophobicity of Tail [26..end]...................: -3.54
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1130 (length 60 amino acids):
MRTSMETAVQ LETAPKMALQ ETDAVRHTPQ RPFNEALQAE AATYLMHERE ADASAELSRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -52.94 (PValue = 3.020194e-01)
Components of the Score Function:
Profile Score...............................................: -7.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.42
Term 14 Hydrophobicity of Tail [26..end]...................: -0.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.1015 (length 60 amino acids):
MTVGVVARTA RGCCRDGGAQ RGPLDTRACR LSPPMLLSLP AQTSSLSACP PPPPRLSPAH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -51.16 (PValue = 2.721491e-01)
Components of the Score Function:
Profile Score...............................................: 0.23
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.53
Term 4 Volume Compensation (-1, 1, 2).....................: -0.73
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.03
Term 14 Hydrophobicity of Tail [26..end]...................: -1.97
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0640 (length 60 amino acids):
MLARQEKKST AFSFLHFRAG ERFYQGHWES VVDMQAQLDA FTEAAQTTLS KRISRPYLRG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -63.21 (PValue = 4.992292e-01)
Components of the Score Function:
Profile Score...............................................: -17.64
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.07
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0500 (length 60 amino acids):
MVTPPPLLSS AAVTQGTSAL RHFHFQHAIA AAAPSSLGFP GAGAAAAAHR TSSGVAGSFF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -36.60 (PValue = 9.807438e-02)
Components of the Score Function:
Profile Score...............................................: 3.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.18
Term 14 Hydrophobicity of Tail [26..end]...................: -0.72
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -39.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.12.0440 (length 60 amino acids):
MMASLWRLLV RLCPSTFAVL LPSSCFAVLP SCHPPHTRAH ARAPALQWRD PASTPASHPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -64.16 (PValue = 5.185490e-01)
Components of the Score Function:
Profile Score...............................................: -4.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.99
Term 4 Volume Compensation (-1, 1, 2).....................: -1.45
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.46
Term 14 Hydrophobicity of Tail [26..end]...................: -3.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.33.2905 (length 60 amino acids):
MYGNQKGMAS GLGSMGGGQD CMASHSSMTG GVSMYGGMGC KSMVSLYGMG GSMDWMYGMG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -79.88 (PValue = 7.962093e-01)
Components of the Score Function:
Profile Score...............................................: -4.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.90
Term 4 Volume Compensation (-1, 1, 2).....................: -2.24
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.71
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.10
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0840 (length 60 amino acids):
MMVGQVVSCA AATTSTGSPM SVTARLAAAA EARAAASRAR FGIFENNAND TARQLLFRGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -60.96 (PValue = 4.537193e-01)
Components of the Score Function:
Profile Score...............................................: -11.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.37
Term 4 Volume Compensation (-1, 1, 2).....................: -0.61
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.90
Term 14 Hydrophobicity of Tail [26..end]...................: -0.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0740 (length 60 amino acids):
MQPVMETPGA LYVNMENVSP ATRKLVERYI SGDGVIVGWG FCRNGELGTN FRYNLVTPMM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -61.78 (PValue = 4.704052e-01)
Components of the Score Function:
Profile Score...............................................: -13.65
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.00
Term 4 Volume Compensation (-1, 1, 2).....................: -2.41
Term 5 Volume Compensation (-1, 2)........................: -1.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.74
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.22
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.14
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0580 (length 60 amino acids):
MHVARSAYRQ LLRVGKEVSD RYADPNDMCF ALFGVLVSRH DFINAGYGST FPAILRTCFL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -33.35 (PValue = 7.515169e-02)
Components of the Score Function:
Profile Score...............................................: -4.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.17
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.57
Term 14 Hydrophobicity of Tail [26..end]...................: -0.04
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0480 (length 60 amino acids):
MFGELVCGPP GSGKTTYCEG KRQFLSVYDP TRPVVMMNLD PANEDIFPYP CDVDIRELVD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -46.87 (PValue = 2.075277e-01)
Components of the Score Function:
Profile Score...............................................: -14.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.57
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.34
Term 14 Hydrophobicity of Tail [26..end]...................: -0.47
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.61
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0115 (length 60 amino acids):
MPSYAEITGS IVAMALTTDQ TLFILYHSNS YAANPVMLRS SKPMVMRDVF LTRSSAFYPN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -66.99 (PValue = 5.754593e-01)
Components of the Score Function:
Profile Score...............................................: -14.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.68
Term 4 Volume Compensation (-1, 1, 2).....................: -0.93
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.35
Term 14 Hydrophobicity of Tail [26..end]...................: -3.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -36.27
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1280 (length 60 amino acids):
MASQSPKCLM LYSTTDGHTK TIMDTIARQL ADETKVRCDV VDIKDGNSYV LADYEKVLLG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -38.12 (PValue = 1.105083e-01)
Components of the Score Function:
Profile Score...............................................: -2.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.70
Term 4 Volume Compensation (-1, 1, 2).....................: -0.30
Term 5 Volume Compensation (-1, 2)........................: -0.46
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.13
Term 9 Volume Limitation [3..8]...........................: -0.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.79
Term 14 Hydrophobicity of Tail [26..end]...................: -0.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1250 (length 60 amino acids):
MSSVSNSEIA KRIREGNQKR REEERKKQQL EQEYLEVVTK KLNEQRQSRS PTRFLPSILI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -36.04 (PValue = 9.370538e-02)
Components of the Score Function:
Profile Score...............................................: 1.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.93
Term 4 Volume Compensation (-1, 1, 2).....................: -2.55
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.26
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -37.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1210 (length 60 amino acids):
MLVSERAQPV RLFNCLLLRA HKDDESDGAA CALHKNAAST SPTTDPIAAA TAVGATRLYF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -32.94 (PValue = 7.261833e-02)
Components of the Score Function:
Profile Score...............................................: 6.72
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.61
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.40
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.1010 (length 60 amino acids):
MLRYTPMWRC SAAAMQTLSA WLTDLAEESM AVPSATAADL QTRQNDGQGP TRKTPAQLWR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.45 (PValue = 4.435830e-01)
Components of the Score Function:
Profile Score...............................................: -6.47
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.30
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.09
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.43
Term 14 Hydrophobicity of Tail [26..end]...................: -2.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0920 (length 60 amino acids):
MTQKLLLAEG LDLLRQCEQH EYDVDRTKLR ISSHNRYCSE LGRLLQSYDT VYHQYVRGIQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -64.04 (PValue = 5.160212e-01)
Components of the Score Function:
Profile Score...............................................: -6.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.40
Term 4 Volume Compensation (-1, 1, 2).....................: -1.86
Term 5 Volume Compensation (-1, 2)........................: -2.94
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.78
Term 14 Hydrophobicity of Tail [26..end]...................: -2.02
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0820 (length 60 amino acids):
MKRSIHTLEQ LQLRLRSDAA TTGGGSGRTG TTVEQRRTAE AAKQKRLATL TPYKQAEYRC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -80.00 (PValue = 7.978129e-01)
Components of the Score Function:
Profile Score...............................................: -16.58
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.25
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.20
Term 14 Hydrophobicity of Tail [26..end]...................: -4.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -47.43
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0620 (length 60 amino acids):
MKGIGRQSFL IVFDFDHTIV DCNTDEVIPA ALGRRDMQRR MMLEKNRIQW TKLMDTIIAP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -65.28 (PValue = 5.412198e-01)
Components of the Score Function:
Profile Score...............................................: -13.24
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.99
Term 4 Volume Compensation (-1, 1, 2).....................: -7.67
Term 5 Volume Compensation (-1, 2)........................: -3.57
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.78
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.72
Term 14 Hydrophobicity of Tail [26..end]...................: -0.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.04
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.06.0590 (length 60 amino acids):
MDFRRIVRIP GYRGCAPAAH GDALKSCPDS YVMCEYLSFS SGGEHSSRDD QAAVVSRLHV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -23.45 (PValue = 3.078547e-02)
Components of the Score Function:
Profile Score...............................................: 2.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.62
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.74
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.3070 (length 60 amino acids):
METAKLSVEA STRYLMELGY HVSAPLNADG SSAASAGEAG DSLCKGFAGA YSLGLHVGAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -12.13 (PValue = 9.101847e-03)
Components of the Score Function:
Profile Score...............................................: 0.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.10
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.26
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.3020 (length 60 amino acids):
MRSLRFLSPQ ANQHCGLSFL SCSFLLVELL DLSRCPPRVP HSIDTAAAAT PICFLCIPCL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -24.92 (PValue = 3.543574e-02)
Components of the Score Function:
Profile Score...............................................: -1.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.90
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.20
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.17
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -23.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2630 (length 60 amino acids):
MIGLSKAEVI IGKLLLNPAH NTAALKRDAN SPLSSFSRQS RLQAFQAETA AAVAAAAPKA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -34.22 (PValue = 8.084337e-02)
Components of the Score Function:
Profile Score...............................................: -5.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.08
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.67
Term 14 Hydrophobicity of Tail [26..end]...................: -0.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2590 (length 60 amino acids):
MSCADVRQKV FRVPGSIVLS LGLSWDFIGA DPVDLDLSAV CFTKEGRFLD VVFFNHLFPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -46.14 (PValue = 1.977585e-01)
Components of the Score Function:
Profile Score...............................................: -13.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.81
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.90
Term 14 Hydrophobicity of Tail [26..end]...................: -1.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -20.58
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2390 (length 60 amino acids):
MSPEQPRETT GLTVATAGPA VTNYHTASNT VHVTLAEERT IDEALSAVNA RRESEKKVLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -48.50 (PValue = 2.308019e-01)
Components of the Score Function:
Profile Score...............................................: -12.08
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.39
Term 5 Volume Compensation (-1, 2)........................: -0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.29
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.64
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.42
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2230 (length 60 amino acids):
MPSDTESSDV TDGDRPLSAA ASVWNMTESS GAAASDRDAS APLLLQIRYS RAAQTPELLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 30 had the best score.
Total Score.................................................: -9.68 (PValue = 6.731395e-03)
Components of the Score Function:
Profile Score...............................................: 3.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.46
Term 14 Hydrophobicity of Tail [26..end]...................: -0.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.2200 (length 60 amino acids):
MGVTCTREKN VVSSSAVIRF RLTRRCSHVE STGSPNNLTR ETSRRPRPAT RARADACIGC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -71.29 (PValue = 6.581057e-01)
Components of the Score Function:
Profile Score...............................................: -10.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.79
Term 4 Volume Compensation (-1, 1, 2).....................: -6.18
Term 5 Volume Compensation (-1, 2)........................: -2.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.21
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.82
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -44.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1760 (length 60 amino acids):
MAGAVPSTGA SEVVTCPSTL TSPVKIDQEW PTTTSSATHT TPAPQAPMAT LCTLAKSSAA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -33.00 (PValue = 7.299101e-02)
Components of the Score Function:
Profile Score...............................................: 7.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.60
Term 14 Hydrophobicity of Tail [26..end]...................: -0.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1690 (length 60 amino acids):
MAPPPISPLP ISLPLPPLAF RRSPLAPRAA LLLPLSESLP SQRPPRSLVT RRFRRRSMQW
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -85.43 (PValue = 8.611599e-01)
Components of the Score Function:
Profile Score...............................................: -15.30
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -1.26
Term 5 Volume Compensation (-1, 2)........................: -0.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.16
Term 14 Hydrophobicity of Tail [26..end]...................: -5.10
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -58.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1670 (length 60 amino acids):
MSITAGTLPP VKGTSVKKSP RKGRPADSMG NGTGAAADPH CYHKCRCYGH DDTLPNYKLL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -56.73 (PValue = 3.708094e-01)
Components of the Score Function:
Profile Score...............................................: -16.74
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.10
Term 5 Volume Compensation (-1, 2)........................: -0.75
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -35.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1620 (length 60 amino acids):
MTVWAIGTTN RAKAESVVTV VNRCFPNETH EVRLCSVSSA VSDQPMSAEE TQRGALNRAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -58.38 (PValue = 4.025072e-01)
Components of the Score Function:
Profile Score...............................................: -9.22
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.74
Term 14 Hydrophobicity of Tail [26..end]...................: -1.36
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1590 (length 60 amino acids):
MLQYTSSARQ ALRATALVLN FFPLGYTCGP KNKQVFFPPN NLDGRTTHQM KKLQGSTDKH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -84.83 (PValue = 8.551183e-01)
Components of the Score Function:
Profile Score...............................................: -18.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.93
Term 4 Volume Compensation (-1, 1, 2).....................: -2.29
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.37
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.89
Term 14 Hydrophobicity of Tail [26..end]...................: -2.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1580 (length 60 amino acids):
MSADPEAPAD PSRVSGGHIV RNMIYAHDEN HNLEILSGWS EQGTREYDQE TVRPASANMN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -76.50 (PValue = 7.469548e-01)
Components of the Score Function:
Profile Score...............................................: -18.62
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.54
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.39
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.15
Term 14 Hydrophobicity of Tail [26..end]...................: -3.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.1320 (length 60 amino acids):
MSSDIEVKST EAGSAPVDTS AASSPGATGA HGPGSGHTSL SLLRTDATPS SATLSPVVEN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -43.85 (PValue = 1.689040e-01)
Components of the Score Function:
Profile Score...............................................: -2.90
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.07
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.96
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.71
Term 14 Hydrophobicity of Tail [26..end]...................: -0.67
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -28.95
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0710 (length 60 amino acids):
MMEGSPSEVH VHSSMAMGLQ ERPPLELVSH ASEVSCLTIN DNYDMWNASM YPNLNSGFDA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -65.46 (PValue = 5.448896e-01)
Components of the Score Function:
Profile Score...............................................: -0.07
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.64
Term 4 Volume Compensation (-1, 1, 2).....................: -0.98
Term 5 Volume Compensation (-1, 2)........................: -1.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.83
Term 14 Hydrophobicity of Tail [26..end]...................: -1.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.40
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0640 (length 60 amino acids):
MRPCIGARNT MHARIHASAP PPLWCTRAFL SIRPFLCPPS PLSRSYRTDA LLCTLLSFLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -22.52 (PValue = 2.809922e-02)
Components of the Score Function:
Profile Score...............................................: -16.66
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.58
Term 4 Volume Compensation (-1, 1, 2).....................: -0.27
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0410 (length 60 amino acids):
MSSAQDEFDE TTIHPDSLPV PATWRQKTSV FRYCGPSVAG AVSSVIDEGV LYRIITDGGG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -49.09 (PValue = 2.395666e-01)
Components of the Score Function:
Profile Score...............................................: -10.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.27
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0290 (length 60 amino acids):
MGGGGGVVAG TPLAAVTLHH RDEPRQASAP GVSRAVLRHE RGHSVMPSIA LHNSTNSELT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -52.53 (PValue = 2.949521e-01)
Components of the Score Function:
Profile Score...............................................: -3.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.34
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0040 (length 60 amino acids):
MGCCLHANGP AQFPHILRAT ALALNSSNTN SLPPPFPPTS TAFSGPSRFS HTRTLSLASH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -25.08 (PValue = 3.596796e-02)
Components of the Score Function:
Profile Score...............................................: 3.33
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.66
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.29
Term 14 Hydrophobicity of Tail [26..end]...................: -0.46
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -24.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.31.0030 (length 60 amino acids):
MSFTELFPCA YGRLSPLPGL ITSLSRAPSA AAARLFGTSY PLFLFALLLR PRRGIRCVSP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -5.58 (PValue = 3.897911e-03)
Components of the Score Function:
Profile Score...............................................: 6.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.68
Term 9 Volume Limitation [3..8]...........................: -0.01
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.86
Term 14 Hydrophobicity of Tail [26..end]...................: -1.70
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -12.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1310 (length 60 amino acids):
MPARHSLALP LSADYAHNER EGFSFFCTSG SHDSTTTLDR YLDDLCAFLR SARLIQSHPD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -55.27 (PValue = 3.434531e-01)
Components of the Score Function:
Profile Score...............................................: -4.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.82
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.36
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.1260 (length 60 amino acids):
MSSHELPFLI LNLAVEMIFV LNSRLHAQAV PPERAASVLR DIGTNIFDTA FVNELFARPA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -53.39 (PValue = 3.097346e-01)
Components of the Score Function:
Profile Score...............................................: -7.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.43
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.19
Term 9 Volume Limitation [3..8]...........................: -0.22
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.45
Term 14 Hydrophobicity of Tail [26..end]...................: -1.32
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0180 (length 60 amino acids):
MYSLSDYIWK QAKGLWLGNA AASHAVGYAT ASGRPFKIIE PGPTDDRSDI VAVVMRHSKT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -71.42 (PValue = 6.603738e-01)
Components of the Score Function:
Profile Score...............................................: -9.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.48
Term 5 Volume Compensation (-1, 2)........................: -0.15
Term 6 Backbone Flexibility [-1..2].......................: -8.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.00
Term 14 Hydrophobicity of Tail [26..end]...................: -2.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -50.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0082 (length 60 amino acids):
MGKDKVHMNL VVVGHVDAGK STATGHLIYK CGGIDKRTIE KFEKEAAEIG KASFKYAWVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -54.12 (PValue = 3.226549e-01)
Components of the Score Function:
Profile Score...............................................: -12.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.87
Term 4 Volume Compensation (-1, 1, 2).....................: -0.24
Term 5 Volume Compensation (-1, 2)........................: -0.44
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.98
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -25.20
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.17.0020 (length 60 amino acids):
MWAGENSGIL FITTVLSHVA LLPTIHFFYR RKYIFELCCA SFGFLASFMY HTTESFGTSI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -59.46 (PValue = 4.238568e-01)
Components of the Score Function:
Profile Score...............................................: -12.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.20
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.17
Term 9 Volume Limitation [3..8]...........................: -0.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.71
Term 14 Hydrophobicity of Tail [26..end]...................: -1.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.78
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0810 (length 60 amino acids):
MDKRMSLWPV RMRLGRRSDR PQVFMDKHYA HPEQRFHSLR NFVEFLDQRH TNVSIFGLLT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -43.30 (PValue = 1.624892e-01)
Components of the Score Function:
Profile Score...............................................: -6.13
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.85
Term 4 Volume Compensation (-1, 1, 2).....................: -7.51
Term 5 Volume Compensation (-1, 2)........................: -3.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.77
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.65
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -33.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0720 (length 60 amino acids):
MMMSASSPYS GHVFDFAEAG ASATAWRTSA RRTAAFKLRG LGSFGLSPQP RGRRCYATTT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -59.70 (PValue = 4.286550e-01)
Components of the Score Function:
Profile Score...............................................: -4.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.30
Term 14 Hydrophobicity of Tail [26..end]...................: -3.44
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.1020 (length 60 amino acids):
MFADSARHSR WMQEQLQQSR KISEYTEETA APRLVLSHGS AVNANQLSYA VDEDENGSAL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -61.47 (PValue = 4.641177e-01)
Components of the Score Function:
Profile Score...............................................: -11.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.46
Term 4 Volume Compensation (-1, 1, 2).....................: -3.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.49
Term 14 Hydrophobicity of Tail [26..end]...................: -1.79
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0810 (length 60 amino acids):
MPVRYSEAVE RAMAEVCPPR DALDAANFDP VVYLNSRFPD EASLGALPAF LDEANERLRK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -73.86 (PValue = 7.037334e-01)
Components of the Score Function:
Profile Score...............................................: -18.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.80
Term 4 Volume Compensation (-1, 1, 2).....................: -3.21
Term 5 Volume Compensation (-1, 2)........................: -5.11
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.93
Term 14 Hydrophobicity of Tail [26..end]...................: -2.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -42.99
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0770 (length 60 amino acids):
MTAVVDASGT VEGELRQAKD TLKTLSALAE QAERGAMVDY DLAQRLMHEV SDRVRPLAQG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -68.11 (PValue = 5.975918e-01)
Components of the Score Function:
Profile Score...............................................: -11.61
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.45
Term 4 Volume Compensation (-1, 1, 2).....................: -3.16
Term 5 Volume Compensation (-1, 2)........................: -5.34
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.14
Term 9 Volume Limitation [3..8]...........................: -0.11
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.37
Term 14 Hydrophobicity of Tail [26..end]...................: -0.93
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.50
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0500 (length 60 amino acids):
MEDTINVFGR GTPAGEAIYR CYVAPSKPST LDPQLAALLA RRRQEREAAE AAQAHPKPIP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -61.74 (PValue = 4.696234e-01)
Components of the Score Function:
Profile Score...............................................: -10.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.36
Term 4 Volume Compensation (-1, 1, 2).....................: -0.58
Term 5 Volume Compensation (-1, 2)........................: -1.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.90
Term 14 Hydrophobicity of Tail [26..end]...................: -2.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -46.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0470 (length 60 amino acids):
MSSSSSGQYS GSGGNRGSGF VHLNTPASIQ YTAGKTLSLS ALRQSKSRVE CAVLPESMSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -43.90 (PValue = 1.695432e-01)
Components of the Score Function:
Profile Score...............................................: -11.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.41
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.44
Term 14 Hydrophobicity of Tail [26..end]...................: -0.63
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -16.62
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.19.0460 (length 60 amino acids):
MATSALPPNS TAALVSANAA AVAEADADAQ AVAVLVNRFV ISTVQFLNRF SNECESRLVQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -75.15 (PValue = 7.253473e-01)
Components of the Score Function:
Profile Score...............................................: -12.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.10
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.18
Term 14 Hydrophobicity of Tail [26..end]...................: -2.34
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2410 (length 60 amino acids):
MSLSEVQRLQ KLVFHHPNKE NYETLVLEQI LMVEQQLGTK TKAEERATAA RREAEQLRGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 47 had the best score.
Total Score.................................................: -79.26 (PValue = 7.876722e-01)
Components of the Score Function:
Profile Score...............................................: -9.87
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.92
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.25
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.62
Term 14 Hydrophobicity of Tail [26..end]...................: -2.17
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -53.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.2160 (length 60 amino acids):
MFNTDAADAF YLRLGNTSCL DVSTKKYSPT SSRQGFLRHR GDSLGGPGDS HAYAINDAYH
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -53.15 (PValue = 3.056113e-01)
Components of the Score Function:
Profile Score...............................................: -8.85
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.14
Term 14 Hydrophobicity of Tail [26..end]...................: -2.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1910 (length 60 amino acids):
MSASNSCTVE EVRKEYAKLL DPQEPLDSRM RELYRLKEDC LKTVAGVTVI LEAIDTTDSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -41.67 (PValue = 1.444795e-01)
Components of the Score Function:
Profile Score...............................................: -4.38
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.48
Term 4 Volume Compensation (-1, 1, 2).....................: -4.52
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.04
Term 9 Volume Limitation [3..8]...........................: -4.15
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.71
Term 14 Hydrophobicity of Tail [26..end]...................: -1.25
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1870 (length 60 amino acids):
MSSGGGTAAR SARAVTLCVP AETTAQEDGH AARRTRRCVS LPVSSAPSAV VAATSSISDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -26.66 (PValue = 4.173606e-02)
Components of the Score Function:
Profile Score...............................................: -4.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.05
Term 4 Volume Compensation (-1, 1, 2).....................: -0.49
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.26
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.18
Term 14 Hydrophobicity of Tail [26..end]...................: -1.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.00
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1790 (length 60 amino acids):
MTSPLASQLQ RLQQRPDGSQ HRLAKSFLFS TQDAQSFSRE QIHQLALNGL QALTAIDNRF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -52.48 (PValue = 2.941236e-01)
Components of the Score Function:
Profile Score...............................................: -21.02
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.59
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.40
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.59
Term 14 Hydrophobicity of Tail [26..end]...................: -0.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1570 (length 60 amino acids):
MAATSIFANI STVEKCAALF PKTVAACEDL VKAAKHRAEQ SLGKIYGISA ADRTFENTAK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -71.35 (PValue = 6.591680e-01)
Components of the Score Function:
Profile Score...............................................: -20.78
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.84
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.84
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.11
Term 14 Hydrophobicity of Tail [26..end]...................: -3.76
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1550 (length 60 amino acids):
MNRAESSANA LGEEFVKNMN TALDIVESLV AKGEAQFAIL ASAKSTFCVG ADIDQMYTVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -60.66 (PValue = 4.476960e-01)
Components of the Score Function:
Profile Score...............................................: -10.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.98
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -37.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.1530 (length 60 amino acids):
MDTAATNLSA HAKPWAPNGP GSQQPQMQHP RSHSNQYSQD SGVSSGQGAG MQRGMRARGC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -58.28 (PValue = 4.006152e-01)
Components of the Score Function:
Profile Score...............................................: -4.32
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.72
Term 14 Hydrophobicity of Tail [26..end]...................: -3.24
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.26.0970 (length 60 amino acids):
MELDHDEQHP DRKTVPQVQC CVCGLVIDSN ISNMCANCLR AHVDITDDLQ REYILIHCPE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -65.52 (PValue = 5.460452e-01)
Components of the Score Function:
Profile Score...............................................: -30.69
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.21
Term 4 Volume Compensation (-1, 1, 2).....................: -0.19
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.52
Term 14 Hydrophobicity of Tail [26..end]...................: -0.74
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.83
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2645 (length 60 amino acids):
MVQCPWDDVM TEAFRRAQMA GRVFPQLCDF PPSVPRDVAE LKYLMPLRAF SEVGRGGKPM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 37 had the best score.
Total Score.................................................: -80.97 (PValue = 8.104374e-01)
Components of the Score Function:
Profile Score...............................................: -21.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.22
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -1.07
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.11
Term 9 Volume Limitation [3..8]...........................: -2.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.70
Term 14 Hydrophobicity of Tail [26..end]...................: -2.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -43.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2630 (length 60 amino acids):
MSSSSQPAQK RAKTEGASDT AGAAAPWVEK YRPRTLAEVE AQDEAVGALR ACLKEGANMP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -63.11 (PValue = 4.971684e-01)
Components of the Score Function:
Profile Score...............................................: -14.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.02
Term 4 Volume Compensation (-1, 1, 2).....................: -0.77
Term 5 Volume Compensation (-1, 2)........................: -0.10
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -1.95
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.54
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2620 (length 60 amino acids):
MELHVCHVTD KPEAHEPQSS SCPREEESNA DRTASKSEVL SHSSPSSCVS DRDPKGTGGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -62.43 (PValue = 4.835063e-01)
Components of the Score Function:
Profile Score...............................................: -8.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.45
Term 14 Hydrophobicity of Tail [26..end]...................: -3.14
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -41.59
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2560 (length 60 amino acids):
MRGGDDVRSG TVPVCGLQYT TSPSLPSAVK LTGDIMMKTS STFQCVAGAT GSSAMGSVST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -48.29 (PValue = 2.277431e-01)
Components of the Score Function:
Profile Score...............................................: 2.39
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.29
Term 14 Hydrophobicity of Tail [26..end]...................: -1.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.68
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2270 (length 60 amino acids):
MNVGSGGETN GEAGQAAAAV ASFPQLTLEE EAELLTKYGA EGPCDDGLEW AAPSQFKSQM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -61.52 (PValue = 4.650116e-01)
Components of the Score Function:
Profile Score...............................................: -6.49
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.60
Term 14 Hydrophobicity of Tail [26..end]...................: -4.42
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1490 (length 60 amino acids):
MCCFGLCAVL CAFVSPSYLY PHIYIYMYVY IYISCFYFHI CFSAYDFVCL RCGGLFRHLF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -59.15 (PValue = 4.177572e-01)
Components of the Score Function:
Profile Score...............................................: -12.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -3.23
Term 4 Volume Compensation (-1, 1, 2).....................: -3.26
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.28
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.25
Term 14 Hydrophobicity of Tail [26..end]...................: -0.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1480 (length 60 amino acids):
MPTSVGTALG VCAVSGSVPF YAHLCRHRIY THIYIYICMY IYIYISCFYF HICFSAYDFV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -88.16 (PValue = 8.864700e-01)
Components of the Score Function:
Profile Score...............................................: -17.28
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.21
Term 4 Volume Compensation (-1, 1, 2).....................: -7.81
Term 5 Volume Compensation (-1, 2)........................: -5.45
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.67
Term 9 Volume Limitation [3..8]...........................: -2.30
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.65
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -54.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1440 (length 60 amino acids):
MRVRVALMRR LVCVPSSYGL TASGRALMRL SHSLLAYADS GACRTPREVQ HHDSACDPSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -66.04 (PValue = 5.565642e-01)
Components of the Score Function:
Profile Score...............................................: -11.14
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.50
Term 4 Volume Compensation (-1, 1, 2).....................: -1.36
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.87
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.63
Term 14 Hydrophobicity of Tail [26..end]...................: -3.55
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.90
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1200 (length 60 amino acids):
MSCYCVEEVD LDIFRGVFIE QWLSGKKHGS CEEALFFCTT CGPPAVQESI KGFSSSVSSS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -60.28 (PValue = 4.402405e-01)
Components of the Score Function:
Profile Score...............................................: -7.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.34
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.52
Term 14 Hydrophobicity of Tail [26..end]...................: -1.80
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1090 (length 60 amino acids):
MSSSMLRSGL QLVAIDYSNP QPQYPGGPVL DAAAFNYDPL SEDSAALHQC VSAVNSPPVT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -41.37 (PValue = 1.413357e-01)
Components of the Score Function:
Profile Score...............................................: 1.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.03
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.11
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.57
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.1000 (length 60 amino acids):
MNSQASSSPL PPAASCVQFR PEQLQLGTGI PLGSGAISQV VQCRLRCAAA PLLPVVVKIV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -18.79 (PValue = 1.921342e-02)
Components of the Score Function:
Profile Score...............................................: -5.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.18
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.56
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -0.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0930 (length 60 amino acids):
MSRVTLAPKL EAVTVYGDCA QLTFSAPVVL KPSASIVAVV ENIEQWGDVD WATLQVRIGE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 25 had the best score.
Total Score.................................................: -60.05 (PValue = 4.356194e-01)
Components of the Score Function:
Profile Score...............................................: -17.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -1.47
Term 5 Volume Compensation (-1, 2)........................: -2.53
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -16.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.79
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.64
Term 14 Hydrophobicity of Tail [26..end]...................: -0.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0805 (length 60 amino acids):
MKLFSYQNRL CSTLVLALCL LSCALAASST PAPTDFITVA GRVHVRNEVA QYVVVRVVDD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 28 had the best score.
Total Score.................................................: -52.99 (PValue = 3.027621e-01)
Components of the Score Function:
Profile Score...............................................: -8.92
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.80
Term 14 Hydrophobicity of Tail [26..end]...................: -0.27
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.07
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0300 (length 60 amino acids):
MALSGLLCRV SCYVAPSLSG PRFYRGFLSR ASSTALALPI SASLTSSSVV PLSYAGSLRE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -42.49 (PValue = 1.533479e-01)
Components of the Score Function:
Profile Score...............................................: -0.83
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.15
Term 4 Volume Compensation (-1, 1, 2).....................: -0.23
Term 5 Volume Compensation (-1, 2)........................: -0.42
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.34
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.22
Term 14 Hydrophobicity of Tail [26..end]...................: -1.31
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -29.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.0200 (length 60 amino acids):
MTTVLDVSRE ASPNAPPHTQ SIYLLTSTSI SDVEFKDSAA QSQVLVGLPQ VQSIDAIHRF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -37.89 (PValue = 1.085406e-01)
Components of the Score Function:
Profile Score...............................................: -7.60
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.69
Term 9 Volume Limitation [3..8]...........................: -0.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.08
Term 14 Hydrophobicity of Tail [26..end]...................: -1.35
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0560 (length 60 amino acids):
MSSDFETLSC NLESSEPRRR HCRRSSSSIG CDSDTLDDLI ADDDAQLLRR LAVRNSAPGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -61.63 (PValue = 4.672896e-01)
Components of the Score Function:
Profile Score...............................................: -16.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.20
Term 4 Volume Compensation (-1, 1, 2).....................: -0.29
Term 5 Volume Compensation (-1, 2)........................: -0.08
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -3.30
Term 9 Volume Limitation [3..8]...........................: -0.08
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.24
Term 14 Hydrophobicity of Tail [26..end]...................: -1.48
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -32.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0380 (length 60 amino acids):
MSTGHVEASG SPLQPLMKGP RPPSNDERPH GVFKSTDGIA SNVNDDLRAR RSRASYDYLV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -60.24 (PValue = 4.393390e-01)
Components of the Score Function:
Profile Score...............................................: -12.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.80
Term 4 Volume Compensation (-1, 1, 2).....................: -1.55
Term 5 Volume Compensation (-1, 2)........................: -1.41
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.72
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.87
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -31.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.03.0230 (length 60 amino acids):
MGGAVSFCLQ KLNKVSEVEY RPYKEYASYG EQSVPVKGSD DSGRSMIYRM SNTSEEELKR
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -84.02 (PValue = 8.465052e-01)
Components of the Score Function:
Profile Score...............................................: -14.96
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.59
Term 14 Hydrophobicity of Tail [26..end]...................: -3.19
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -16.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -57.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5330 (length 60 amino acids):
MSSRDCTVDR EAAVQKRKKD HIDICLHQDV EPHKRRTSIW NKYTLPYKAL PEVDLQKIDT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -70.46 (PValue = 6.425746e-01)
Components of the Score Function:
Profile Score...............................................: -22.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -7.77
Term 4 Volume Compensation (-1, 1, 2).....................: -3.35
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.88
Term 14 Hydrophobicity of Tail [26..end]...................: -0.94
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -31.92
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5260 (length 60 amino acids):
MSYRSSEAKK EEFRKYLEST QVVDALTRVL VNLYEEEEKP EDPVDYIKRV LGGASSADYE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -80.32 (PValue = 8.019971e-01)
Components of the Score Function:
Profile Score...............................................: -23.80
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.64
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.96
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.19
Term 14 Hydrophobicity of Tail [26..end]...................: -2.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5250 (length 60 amino acids):
MLTFTVLVLA ALALLCHCRK RAYARNTVGF LHAAAGAGGG GERVLWVALD GLQHADAARG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -33.85 (PValue = 7.839893e-02)
Components of the Score Function:
Profile Score...............................................: -4.57
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.91
Term 14 Hydrophobicity of Tail [26..end]...................: -2.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -17.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.5060 (length 60 amino acids):
MLLSDAEAKI TAVLKSLLDT PRTTYEVENL YQLNCERIAA VRAALADMSG DYVDQLCERC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -80.34 (PValue = 8.022777e-01)
Components of the Score Function:
Profile Score...............................................: -9.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.22
Term 5 Volume Compensation (-1, 2)........................: -1.14
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.56
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.20
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -59.29
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4860 (length 60 amino acids):
MLKEWLRGSS SEAEKPAEEK KPVSRMVVDA EKPLETHESA ASKRREAYEK KLAESAKEGP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -64.04 (PValue = 5.160408e-01)
Components of the Score Function:
Profile Score...............................................: -15.35
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.31
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.56
Term 14 Hydrophobicity of Tail [26..end]...................: -2.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4780 (length 60 amino acids):
MPFTSLMSFL SSGWVSAAES TTTATTTNIL YELHAHPIGL CSWASPSLTA AFVSLACAWL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -24.76 (PValue = 3.490911e-02)
Components of the Score Function:
Profile Score...............................................: -1.94
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.51
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.29
Term 14 Hydrophobicity of Tail [26..end]...................: -0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -22.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4770 (length 60 amino acids):
MPNTYCYLDI AIGGKPKRER VVLELFADVT PKTCENFRQL CLGNDGKKVE GTEVPMTYQG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -61.11 (PValue = 4.568484e-01)
Components of the Score Function:
Profile Score...............................................: -8.99
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.03
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.33
Term 14 Hydrophobicity of Tail [26..end]...................: -2.75
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.12
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4710 (length 60 amino acids):
MKPKCNVVLL AYALACFFIT QASLAHVIGV DLGSEYIKVA GPHGDKGVDI VLNEQSRRKT
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -84.29 (PValue = 8.494336e-01)
Components of the Score Function:
Profile Score...............................................: -27.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.16
Term 4 Volume Compensation (-1, 1, 2).....................: -1.11
Term 5 Volume Compensation (-1, 2)........................: -0.33
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.10
Term 14 Hydrophobicity of Tail [26..end]...................: -5.84
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -20.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.53
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4610 (length 60 amino acids):
MSSVTPTIPF KAWLKLHAKA ICQALPLSLL IVVEARDLYY RATWDVAPVP PSKFEVGDVI
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -61.04 (PValue = 4.553239e-01)
Components of the Score Function:
Profile Score...............................................: -18.15
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.80
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: -2.55
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.20
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.97
Term 14 Hydrophobicity of Tail [26..end]...................: -0.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -26.88
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4590 (length 60 amino acids):
MAPFCITPPL RFYKSNRGIR LSNPSRRWLY NRLFLGGIGA FGCYLTLRYR LAAREASRNP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 40 had the best score.
Total Score.................................................: -73.86 (PValue = 7.038515e-01)
Components of the Score Function:
Profile Score...............................................: -17.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.47
Term 9 Volume Limitation [3..8]...........................: -1.66
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.10
Term 14 Hydrophobicity of Tail [26..end]...................: -3.61
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -40.86
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4370 (length 60 amino acids):
MLRLSLLLQL RPRHIMFTPP PLAKRTGKFR CKVCQHSWFS DEVWVTKTTQ RVYQGESCET
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -74.93 (PValue = 7.218305e-01)
Components of the Score Function:
Profile Score...............................................: -17.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.88
Term 4 Volume Compensation (-1, 1, 2).....................: -0.63
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.82
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.85
Term 14 Hydrophobicity of Tail [26..end]...................: -4.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4160 (length 60 amino acids):
MGSLVMGRCR RGAEETFEFR EEYALLDAPI ANAEHIPLRL RPQERKIQRL MRGVILASSY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -52.98 (PValue = 3.026927e-01)
Components of the Score Function:
Profile Score...............................................: -22.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.11
Term 4 Volume Compensation (-1, 1, 2).....................: -3.45
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.94
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.68
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.4150 (length 60 amino acids):
MNRHNKFYAE VADELEGEDY YDDDDDDYNN DEEYEEEGEY DEAAYETTAS AASPEPVHMP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -69.98 (PValue = 6.336316e-01)
Components of the Score Function:
Profile Score...............................................: -11.96
Term 0 Contents and Windows of DE in Region [-11..1]......: -0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -2.43
Term 4 Volume Compensation (-1, 1, 2).....................: -2.21
Term 5 Volume Compensation (-1, 2)........................: -1.23
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.57
Term 14 Hydrophobicity of Tail [26..end]...................: -3.58
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -46.02
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3810 (length 60 amino acids):
MSQLWVKRAK AEMTRHSRVL ETINRVFPMP FEERRSRVGM TSYATYRWLR YFPVILVPVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -17.00 (PValue = 1.587100e-02)
Components of the Score Function:
Profile Score...............................................: -4.68
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.11
Term 4 Volume Compensation (-1, 1, 2).....................: -1.49
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -5.68
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.05
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3420 (length 60 amino acids):
MRSTAAKKSF HPPFKHTAPC NTAASIHAVA RQLHRSQAFA LHAAPSFADD PCAANTSSTP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -47.67 (PValue = 2.188295e-01)
Components of the Score Function:
Profile Score...............................................: 1.19
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.10
Term 4 Volume Compensation (-1, 1, 2).....................: -1.47
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.00
Term 14 Hydrophobicity of Tail [26..end]...................: -2.30
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3280 (length 60 amino acids):
MTRAGMKGKV LGKEKKAAII DARKKAAESR KNRDDKRWKR VLANMDEEKR KKFHGVGNTA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -68.68 (PValue = 6.086540e-01)
Components of the Score Function:
Profile Score...............................................: -14.29
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.99
Term 14 Hydrophobicity of Tail [26..end]...................: -1.29
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.39
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.3210 (length 60 amino acids):
MSVKNTFGTQ AAKALCANLY TNWLSEDENV ERIRDLLNRV LTLSATDQHS EMGAKNAASM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -57.48 (PValue = 3.851734e-01)
Components of the Score Function:
Profile Score...............................................: -6.51
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.46
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -1.13
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.13
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -6.73
Term 14 Hydrophobicity of Tail [26..end]...................: -1.87
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -38.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2790 (length 60 amino acids):
MNKGAVTTCR MSVVRNCLAW VGVFALLSLL FAGTVDAQVT APWYRINYNT PAYVLYKPQD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 32 had the best score.
Total Score.................................................: -75.14 (PValue = 7.252780e-01)
Components of the Score Function:
Profile Score...............................................: -17.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.44
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -2.37
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.32
Term 14 Hydrophobicity of Tail [26..end]...................: -1.68
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -45.51
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2730 (length 60 amino acids):
MRRTAVALSS VAAAGEAAPN PVTYLTDDEK MLVETVRAFS LTHVVPRSRQ MDEVGKMDPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -70.73 (PValue = 6.476850e-01)
Components of the Score Function:
Profile Score...............................................: -13.86
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -5.01
Term 4 Volume Compensation (-1, 1, 2).....................: -1.62
Term 5 Volume Compensation (-1, 2)........................: -0.48
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.02
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -7.59
Term 14 Hydrophobicity of Tail [26..end]...................: -2.16
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -52.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2650 (length 60 amino acids):
MALDKSRISI LSATKVDGEK LSSVGDTMDS LIPASRRLQL ESEKCCPLCC VAYGVLISSV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -35.72 (PValue = 9.138158e-02)
Components of the Score Function:
Profile Score...............................................: -11.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.08
Term 4 Volume Compensation (-1, 1, 2).....................: -1.58
Term 5 Volume Compensation (-1, 2)........................: -2.49
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.10
Term 9 Volume Limitation [3..8]...........................: -0.89
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.14
Term 14 Hydrophobicity of Tail [26..end]...................: -0.01
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -8.30
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2610 (length 60 amino acids):
MKLEPRERRP RSDYILDNAA ALQLGKLYLG WGRSKRRSKP KLATPAAVSK PKTAPVKAST
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -68.05 (PValue = 5.964287e-01)
Components of the Score Function:
Profile Score...............................................: -8.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.02
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.64
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2600 (length 60 amino acids):
MRPRCVALLH VAGRRAEVGR VDAPDNADSR AGNLCGVVVR VRFRRRLWAD AGEHVVVQWG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 26 had the best score.
Total Score.................................................: -66.76 (PValue = 5.708888e-01)
Components of the Score Function:
Profile Score...............................................: -13.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.23
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.06
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.96
Term 14 Hydrophobicity of Tail [26..end]...................: -1.08
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -12.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -41.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.2140 (length 60 amino acids):
MSLRLESIRV YRELYRAASR SARECALYNS SGLLDYVSRR FGQEADKQSG QLANALRTLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -58.84 (PValue = 4.116415e-01)
Components of the Score Function:
Profile Score...............................................: -3.89
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.29
Term 4 Volume Compensation (-1, 1, 2).....................: -0.42
Term 5 Volume Compensation (-1, 2)........................: -1.68
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -2.10
Term 9 Volume Limitation [3..8]...........................: -0.14
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -42.96
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1690 (length 60 amino acids):
MGAPLAALQT ALSTTSTDGG DAPGAAPPLS ALPTVRLLNL SYNSLHLFTG GETLKGLTVL
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -35.38 (PValue = 8.884661e-02)
Components of the Score Function:
Profile Score...............................................: 1.55
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -4.00
Term 4 Volume Compensation (-1, 1, 2).....................: -3.41
Term 5 Volume Compensation (-1, 2)........................: -5.43
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.09
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.93
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1620 (length 60 amino acids):
MFSKENFIDL AHQAVSAVRR IVGSSESWNV RDALSATSQV VITVCKANTT LDAAILEAWV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 45 had the best score.
Total Score.................................................: -49.33 (PValue = 2.431895e-01)
Components of the Score Function:
Profile Score...............................................: -10.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.39
Term 4 Volume Compensation (-1, 1, 2).....................: -1.25
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -8.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.52
Term 14 Hydrophobicity of Tail [26..end]...................: -0.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -23.22
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1490 (length 60 amino acids):
MTHIGQLYVD RAADAARVDQ VYRGQRTSLL LGNHHLRGFF FFDASSGAAA VQAGDGKDND
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -80.68 (PValue = 8.067348e-01)
Components of the Score Function:
Profile Score...............................................: -5.63
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -11.54
Term 14 Hydrophobicity of Tail [26..end]...................: -3.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -63.06
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1480 (length 60 amino acids):
MEHVQQYKFY KEKKMSIVLA PFSGGQPHGG VELGPDYLLK QGLQQDMEKL GWNTRLERVF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -73.41 (PValue = 6.960664e-01)
Components of the Score Function:
Profile Score...............................................: -21.06
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -2.22
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.85
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -48.35
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1330 (length 60 amino acids):
MKPALHRALR QTPLFVLVVF VATLCLSHAL AEGNVGEDAS EVLELISEGT ITTYKLPDSM
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -45.07 (PValue = 1.839025e-01)
Components of the Score Function:
Profile Score...............................................: -22.26
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.32
Term 4 Volume Compensation (-1, 1, 2).....................: -0.54
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.53
Term 14 Hydrophobicity of Tail [26..end]...................: -2.41
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.81
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1280 (length 60 amino acids):
MSITSRFIGG VKHLLKGGSM KYLAAGEPYC PFGEAFGLTI LPEYILEDDA SNLRKGYVDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -53.49 (PValue = 3.115648e-01)
Components of the Score Function:
Profile Score...............................................: -1.17
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.40
Term 4 Volume Compensation (-1, 1, 2).....................: -0.21
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.06
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.96
Term 14 Hydrophobicity of Tail [26..end]...................: -0.66
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.32
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1080 (length 60 amino acids):
MRAKNMTRPA YLIDHVIHAV PVAMVHYCCE LKRQLATLPL LRFFDLLPSP ETVKTRGGTC
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -72.52 (PValue = 6.802875e-01)
Components of the Score Function:
Profile Score...............................................: -21.20
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.97
Term 4 Volume Compensation (-1, 1, 2).....................: -1.87
Term 5 Volume Compensation (-1, 2)........................: -0.91
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.64
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.81
Term 14 Hydrophobicity of Tail [26..end]...................: -2.12
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.31
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.1040 (length 60 amino acids):
MTSQPHVTMS KNTGSVTEQH KRMSHTTGDN NEEEKHILAG RYKTKLCKNY VARGECPYDV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -83.39 (PValue = 8.395587e-01)
Components of the Score Function:
Profile Score...............................................: -27.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.72
Term 4 Volume Compensation (-1, 1, 2).....................: -0.01
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -3.07
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.87
Term 14 Hydrophobicity of Tail [26..end]...................: -3.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.87
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.35.0990 (length 60 amino acids):
MLHKYDKIED AMAACVSLEY PLIIALHDKL PTFLNNADEA TCGSGASGVA GGRSAAELTF
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -39.61 (PValue = 1.238762e-01)
Components of the Score Function:
Profile Score...............................................: 5.67
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.28
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.01
Term 14 Hydrophobicity of Tail [26..end]...................: -0.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -33.28
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0360 (length 60 amino acids):
MAPPVGRIAT DVVVRSSKRV PSLAAPRSYP LASTIICASL RSTVTAAAVA EPGTVASPAS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -39.66 (PValue = 1.243494e-01)
Components of the Score Function:
Profile Score...............................................: 1.31
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.99
Term 14 Hydrophobicity of Tail [26..end]...................: -0.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -40.97
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0280 (length 60 amino acids):
MRRLFLLLAW QPSFAKHLSE LEPVPQRAPV EKRRRQHIPL SLQAREELSR KSNELQYHVV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -65.86 (PValue = 5.527855e-01)
Components of the Score Function:
Profile Score...............................................: -25.84
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.04
Term 4 Volume Compensation (-1, 1, 2).....................: -0.08
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.19
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.68
Term 14 Hydrophobicity of Tail [26..end]...................: -1.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.01
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.01.0110 (length 60 amino acids):
MLPFSYRVLM RGVSAVSGAL SVALQHRALA GTTRSFSSSR PVWLAPAAPT KQAPPAMGGD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 31 had the best score.
Total Score.................................................: -53.73 (PValue = 3.157012e-01)
Components of the Score Function:
Profile Score...............................................: -6.03
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: -0.05
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.61
Term 14 Hydrophobicity of Tail [26..end]...................: -2.03
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -35.70
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3720 (length 60 amino acids):
MQYLAAYALV ALSGKTPSKA DVQAVLKAAG VAVDASRVDA VFQEMEGKSF DAVVAEGRTK
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 34 had the best score.
Total Score.................................................: -65.83 (PValue = 5.523065e-01)
Components of the Score Function:
Profile Score...............................................: -15.46
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.12
Term 4 Volume Compensation (-1, 1, 2).....................: -0.02
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.47
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.34
Term 14 Hydrophobicity of Tail [26..end]...................: -1.37
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -38.38
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3390 (length 60 amino acids):
MQPINPNDRN TQAQFVEIAC RAVSPDPTVR TPAERELLAY LDAVDQQSGL PQLLLELTHG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -37.98 (PValue = 1.092782e-01)
Components of the Score Function:
Profile Score...............................................: -17.50
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.35
Term 4 Volume Compensation (-1, 1, 2).....................: -1.10
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.13
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -4.48
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.3370 (length 60 amino acids):
MGGCCKGARC PFSHELVQLP PKGVDASGGY FISGNVANYR AAASTSTASP SSRSFVGRWD
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -60.46 (PValue = 4.437250e-01)
Components of the Score Function:
Profile Score...............................................: -8.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.01
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -8.95
Term 14 Hydrophobicity of Tail [26..end]...................: -2.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -4.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -39.67
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.30.2950 (length 60 amino acids):
MPALTIGSTL PDPPQTKEEL LAVQNLLSHL QTSLTLQRLT KRSFVRRKTI SLTSDGKALE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -76.03 (PValue = 7.396442e-01)
Components of the Score Function:
Profile Score...............................................: -23.05
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -3.71
Term 4 Volume Compensation (-1, 1, 2).....................: -1.48
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.91
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.37
Term 14 Hydrophobicity of Tail [26..end]...................: -1.51
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -36.98
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1340 (length 60 amino acids):
MPSLNNNTIR EDVIFKRRVK DVLLRHGGTG GLVKVLIDFN AREAVAARQQ RQTTSTDSGS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -81.91 (PValue = 8.221845e-01)
Components of the Score Function:
Profile Score...............................................: -11.18
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.33
Term 4 Volume Compensation (-1, 1, 2).....................: -0.55
Term 5 Volume Compensation (-1, 2)........................: -0.03
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.16
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.76
Term 14 Hydrophobicity of Tail [26..end]...................: -2.90
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -54.73
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1203 (length 60 amino acids):
MSTKYLAAYA LASLSKASPS QADVEAICKA VHIDVDQATL AFVMESVTGR DVATLIAEGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -53.53 (PValue = 3.122964e-01)
Components of the Score Function:
Profile Score...............................................: -19.01
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.33
Term 4 Volume Compensation (-1, 1, 2).....................: -1.18
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.53
Term 14 Hydrophobicity of Tail [26..end]...................: -0.09
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -18.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.1160 (length 60 amino acids):
MSCGNAKINS PAPSFEEVAL MPNGSFKKIS LSSYKGKWVV LFFYPLDFSF VCPTEVIAFS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -54.60 (PValue = 3.313054e-01)
Components of the Score Function:
Profile Score...............................................: -12.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.49
Term 4 Volume Compensation (-1, 1, 2).....................: -2.25
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.40
Term 14 Hydrophobicity of Tail [26..end]...................: -1.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -25.69
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0990 (length 60 amino acids):
MPSAPLPGQL ANYSSPLYMY LHLIKNSTAK TPQLYTAKDN SKTAMHLLTR RAANANYTVN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -71.22 (PValue = 6.568015e-01)
Components of the Score Function:
Profile Score...............................................: -20.76
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.55
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.16
Term 9 Volume Limitation [3..8]...........................: -1.99
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.87
Term 14 Hydrophobicity of Tail [26..end]...................: -1.89
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -34.46
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0510 (length 60 amino acids):
MPAGMSDAAG KTLADFKAPY PEPTSQQRRY VIFLDPKGDS KELNDYKVEL IPGRVEKVDG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 39 had the best score.
Total Score.................................................: -58.41 (PValue = 4.032479e-01)
Components of the Score Function:
Profile Score...............................................: -23.25
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.16
Term 4 Volume Compensation (-1, 1, 2).....................: -0.04
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.04
Term 14 Hydrophobicity of Tail [26..end]...................: -1.81
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -19.16
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0490 (length 60 amino acids):
MWRGGTNAAP PRSASMEGLG GDGGGSSRRN SQPGSAAPAA TSASRKWPLR SLFSAGGGSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -52.25 (PValue = 2.902495e-01)
Components of the Score Function:
Profile Score...............................................: 3.41
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -4.85
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -1.83
Term 14 Hydrophobicity of Tail [26..end]...................: -0.98
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: -12.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.66
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0440 (length 60 amino acids):
MIPTRSNQRP ARVHGRTHEL VLQNEEAESP HSSENDDEDK SPLHAVIQAP PKRRHGPTKQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 35 had the best score.
Total Score.................................................: -99.79 (PValue = 9.551786e-01)
Components of the Score Function:
Profile Score...............................................: -15.27
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.14
Term 4 Volume Compensation (-1, 1, 2).....................: -0.65
Term 5 Volume Compensation (-1, 2)........................: -0.39
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.05
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.24
Term 14 Hydrophobicity of Tail [26..end]...................: -5.05
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: -28.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -68.52
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0430 (length 60 amino acids):
MNVYTSDGLL VSRGADTGGL STEQGQQLIS IYRLFLQLHH AGTGAMRIKD MIKPETTDAV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 44 had the best score.
Total Score.................................................: -62.57 (PValue = 4.862551e-01)
Components of the Score Function:
Profile Score...............................................: -6.40
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.13
Term 4 Volume Compensation (-1, 1, 2).....................: -0.71
Term 5 Volume Compensation (-1, 2)........................: -1.24
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -4.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.17
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -9.20
Term 14 Hydrophobicity of Tail [26..end]...................: -2.71
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -44.17
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0140 (length 60 amino acids):
MPKANKHAEV KPSKYKTSLC QFFCKGEECP YAGRCAFAHG EHELQTESKN VELLKATGLQ
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 38 had the best score.
Total Score.................................................: -40.13 (PValue = 1.288817e-01)
Components of the Score Function:
Profile Score...............................................: -17.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.24
Term 4 Volume Compensation (-1, 1, 2).....................: -1.80
Term 5 Volume Compensation (-1, 2)........................: -0.38
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.50
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.25
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -6.18
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0100 (length 60 amino acids):
MQSCAVIGCG PAGMVASTVL RQSGLLVTCF DLAPEPGGIW ASNARDIFSS RGCVSPIYPS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -49.65 (PValue = 2.481977e-01)
Components of the Score Function:
Profile Score...............................................: -2.81
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -1.19
Term 4 Volume Compensation (-1, 1, 2).....................: -0.70
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.33
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.84
Term 14 Hydrophobicity of Tail [26..end]...................: -1.57
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.15.0030 (length 60 amino acids):
MRPYSSVRRM TQQSKRLRVA STLVLSALVI FGFLVYHQSP LFSPCDSAYA NVYDVVIDAG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -44.59 (PValue = 1.778972e-01)
Components of the Score Function:
Profile Score...............................................: -5.16
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.43
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.48
Term 14 Hydrophobicity of Tail [26..end]...................: -0.52
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -27.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1560 (length 60 amino acids):
MTSPISALVQ EVHPEALQWR RHIHEYPYVA YEEQPTADYV ADVLSSMPAP LDIRRLTPNS
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -56.17 (PValue = 3.602134e-01)
Components of the Score Function:
Profile Score...............................................: -15.93
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -1.14
Term 5 Volume Compensation (-1, 2)........................: -0.92
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -3.92
Term 14 Hydrophobicity of Tail [26..end]...................: -1.50
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -24.24
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1470 (length 60 amino acids):
MLGSSSKATQ HLLRAAEQEV VNAQRENFER LHPAASIFAS QRDRRASSAL SDSSLGILGA
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 46 had the best score.
Total Score.................................................: -24.02 (PValue = 3.250770e-02)
Components of the Score Function:
Profile Score...............................................: 2.53
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.50
Term 4 Volume Compensation (-1, 1, 2).....................: -0.79
Term 5 Volume Compensation (-1, 2)........................: -1.22
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -12.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.05
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -26.55
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.1200 (length 60 amino acids):
MFDEFREDSV EPLPMDASKS SPTPWVNWGP SIDGEATPCF KGGFLYRIID SKKKVWALYN
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 43 had the best score.
Total Score.................................................: -63.47 (PValue = 5.046589e-01)
Components of the Score Function:
Profile Score...............................................: -13.42
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: 0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.76
Term 4 Volume Compensation (-1, 1, 2).....................: -1.99
Term 5 Volume Compensation (-1, 2)........................: -0.02
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -4.78
Term 14 Hydrophobicity of Tail [26..end]...................: -1.23
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -34.05
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0820 (length 60 amino acids):
MPLFSSGNTP VVPPTPTSLA AAKDAPQGPR DFSRAAALTY RTAPHPSDST DGVFEALLML
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 48 had the best score.
Total Score.................................................: -27.69 (PValue = 4.586184e-02)
Components of the Score Function:
Profile Score...............................................: 4.34
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.03
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -20.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: 0.00
Term 14 Hydrophobicity of Tail [26..end]...................: 0.00
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -32.03
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0780 (length 60 amino acids):
MPVEREVITL AFGNYSSLVA AQWANGTSHY DAHHSTLYSE CRSADVLGGG SSGNGRVRVP
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -52.50 (PValue = 2.944462e-01)
Components of the Score Function:
Profile Score...............................................: 2.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.88
Term 14 Hydrophobicity of Tail [26..end]...................: -1.59
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -43.47
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0540 (length 60 amino acids):
MPPPTEMQEM EMEMVQGMYD TYERLSDDPP SYCVSLAATQ DEPPQLRVII TYPTEEYPES
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 36 had the best score.
Total Score.................................................: -68.74 (PValue = 6.097266e-01)
Components of the Score Function:
Profile Score...............................................: -21.91
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -0.11
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -5.76
Term 14 Hydrophobicity of Tail [26..end]...................: -4.95
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: -8.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -30.82
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0510 (length 60 amino acids):
MLSYTSTLLR VFNRKNKAPQ RMSNFTKVTN LNKAEKVKIE TVDGDVVKGR GRVHRRSHSG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 49 had the best score.
Total Score.................................................: -77.05 (PValue = 7.555130e-01)
Components of the Score Function:
Profile Score...............................................: 1.79
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: -0.86
Term 4 Volume Compensation (-1, 1, 2).....................: -2.16
Term 5 Volume Compensation (-1, 2)........................: -0.05
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: -24.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -2.04
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -10.55
Term 14 Hydrophobicity of Tail [26..end]...................: -3.18
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: -12.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: -0.00
Profile independent Score...................................: -66.84
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0480 (length 60 amino acids):
MQRWPCRRCC RAATLGSRTF VLVRRRAPSA FITTASHASS GAAPPWTVAH QRVCIIIPPV
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 41 had the best score.
Total Score.................................................: -28.76 (PValue = 5.051908e-02)
Components of the Score Function:
Profile Score...............................................: -2.11
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.12
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -2.47
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: -12.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -14.65
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0440 (length 60 amino acids):
MASDTSSNFY YFAYGTYVDA AELQRSLAAV SGSVASIIHS ARPALLPGYR LVLDAVSAEG
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 33 had the best score.
Total Score.................................................: -15.36 (PValue = 1.324153e-02)
Components of the Score Function:
Profile Score...............................................: -1.95
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: 0.00
Term 3 Volume Limitation [-1..+2].........................: 0.00
Term 4 Volume Compensation (-1, 1, 2).....................: 0.00
Term 5 Volume Compensation (-1, 2)........................: 0.00
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: -0.06
Term 9 Volume Limitation [3..8]...........................: 0.00
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.95
Term 14 Hydrophobicity of Tail [26..end]...................: -0.39
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -1.41
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0370 (length 60 amino acids):
MEAPLGQLHH SEWYERVQVF LVLATERVTS LRSGIFWTLS YVLLLALMYL FHSPFRSQLE
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 29 had the best score.
Total Score.................................................: -26.22 (PValue = 4.005439e-02)
Components of the Score Function:
Profile Score...............................................: -8.97
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -1.55
Term 4 Volume Compensation (-1, 1, 2).....................: -1.21
Term 5 Volume Compensation (-1, 2)........................: -1.90
Term 6 Backbone Flexibility [-1..2].......................: -4.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -1.45
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: 0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: 0.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.89
Term 14 Hydrophobicity of Tail [26..end]...................: -2.26
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -13.25
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0280 (length 60 amino acids):
MRRLFPTAKL LGSTTGIRLA SMKSSDKERL ERLVEEVNGI KSKLKVLEES KAANGLVDLY
The site with the best score is shown in black.
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Prediction of potential C-terminal GPI-Modification Sites
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Use of the prediction function for METAZOA
None potential GPI-modification site was found.
Among all positions checked, sequence position 42 had the best score.
Total Score.................................................: -45.32 (PValue = 1.870168e-01)
Components of the Score Function:
Profile Score...............................................: -13.88
Term 0 Contents and Windows of DE in Region [-11..1]......: 0.00
Term 1 Hydrophilicity of N-terminal Region [-11..1].......: -0.00
Term 2 Penalty for low Profile Score in Region [0..2].....: -4.00
Term 3 Volume Limitation [-1..+2].........................: -4.74
Term 4 Volume Compensation (-1, 1, 2).....................: -6.11
Term 5 Volume Compensation (-1, 2)........................: -3.56
Term 6 Backbone Flexibility [-1..2].......................: 0.00
Term 7 Propeptide Length..................................: 0.00
Term 8 Hydrophilicity of Spacer Region [3..8].............: 0.00
Term 9 Volume Limitation [3..8]...........................: -0.27
Term 10 Penalty for charged AAs in Spacer Region [3..10]...: -0.00
Term 11 Backbone Flexibility [3..8].... ...................: 0.00
Term 12 Penalty for low Profile Score in Region [10..end]..: -12.00
Term 13 Hydrophobicity of Tail [10..end]...................: -0.70
Term 14 Hydrophobicity of Tail [26..end]...................: -0.06
Term 15 Even Distribution of Hydrophobicity [9..end].......: 0.00
Term 16 Penalty for polar Windows in Region [10..end]......: 0.00
Term 17 Penalty for SGC-Windows in Region [10..end]........: 0.00
Term 18 LVI Contents [10..end].............................: 0.00
Term 19 Penalty for FYHW - Sections in Region [10..end]....: 0.00
Term 20 Penalty for Windows with small Volume [10..end]....: 0.00
Profile independent Score...................................: -15.44
~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~ ~~~~~~~~~~
Query sequence LmjF.20.0240 (length 60 amino acids):
MASL