1 Annotation
We take the annotation data from ensembl’s biomart instance. The genome which was used to map the data was hg38 revision 100. My default when using biomart is to load the data from 1 year before the current date.
hs_annot <- sm(load_biomart_annotations(year = "2020"))
hs_annot <- hs_annot[["annotation"]]
hs_annot[["transcript"]] <- paste0(rownames(hs_annot), ".", hs_annot[["version"]])
rownames(hs_annot) <- make.names(hs_annot[["ensembl_gene_id"]], unique = TRUE)
tx_gene_map <- hs_annot[, c("transcript", "ensembl_gene_id")]
summary(hs_annot)## ensembl_transcript_id ensembl_gene_id version transcript_version
## Length:227921 Length:227921 Min. : 1.0 Min. : 1.00
## Class :character Class :character 1st Qu.: 6.0 1st Qu.: 1.00
## Mode :character Mode :character Median :12.0 Median : 1.00
## Mean :10.7 Mean : 3.08
## 3rd Qu.:16.0 3rd Qu.: 5.00
## Max. :29.0 Max. :17.00
##
## hgnc_symbol description gene_biotype cds_length
## Length:227921 Length:227921 Length:227921 Min. : 3
## Class :character Class :character Class :character 1st Qu.: 357
## Mode :character Mode :character Mode :character Median : 694
## Mean : 1139
## 3rd Qu.: 1446
## Max. :107976
## NA's :127343
## chromosome_name strand start_position end_position
## Length:227921 Length:227921 Min. :5.77e+02 Min. :6.47e+02
## Class :character Class :character 1st Qu.:3.11e+07 1st Qu.:3.12e+07
## Mode :character Mode :character Median :6.04e+07 Median :6.06e+07
## Mean :7.41e+07 Mean :7.42e+07
## 3rd Qu.:1.09e+08 3rd Qu.:1.09e+08
## Max. :2.49e+08 Max. :2.49e+08
##
## transcript
## Length:227921
## Class :character
## Mode :character
##
##
##
## hs_go <- sm(load_biomart_go()[["go"]])
hs_length <- hs_annot[, c("ensembl_gene_id", "cds_length")]
colnames(hs_length) <- c("ID", "length")2 Introduction
This document is intended to provide an overview of TMRC3 samples which have been sequenced. It includes some plots and analyses showing the relationships among the samples as well as some differential analyses when possible.
3 Sample Estimation
3.1 Generate expressionsets
The sample sheet is copied from our shared online sheet and updated with each release of sequencing data.
samplesheet <- "sample_sheets/tmrc3_samples_20210512.xlsx"3.1.1 Hisat2 expressionsets
The first thing to note is the large range in coverage. There are multiple samples with coverage which is too low to use. These will be removed shortly.
In the following block I immediately exclude any non-coding reads as well.
## Create the expressionset and immediately pass it to a filter
## removing the non protein coding genes.
sanitize_columns <- c("visitnumber", "clinicaloutcome", "donor",
"typeofcells", "clinicalpresentation",
"condition", "batch")
hs_expt <- create_expt(samplesheet,
file_column = "hg38100hisatfile",
savefile = glue::glue("rda/hs_expt_all-v{ver}.rda"),
gene_info = hs_annot) %>%
exclude_genes_expt(column = "gene_biotype", method = "keep",
pattern = "protein_coding", meta_column = "ncrna_lost") %>%
sanitize_expt_metadata(columns = sanitize_columns) %>%
set_expt_factors(columns = sanitize_columns, class = "factor")## Reading the sample metadata.## Dropped 113 rows from the sample metadata because they were blank.## The sample definitions comprises: 131 rows(samples) and 80 columns(metadata fields).## Warning in create_expt(samplesheet, file_column = "hg38100hisatfile", savefile =
## glue::glue("rda/hs_expt_all-v{ver}.rda"), : Some samples were removed when cross
## referencing the samples against the count data.## Matched 21452 annotations and counts.## Bringing together the count matrix and gene information.## Some annotations were lost in merging, setting them to 'undefined'.## The final expressionset has 21481 rows and 119 columns.## Before removal, there were 21481 genes, now there are 19941.## There are 13 samples which kept less than 90 percent counts.## TMRC30015 TMRC30017 TMRC30019 TMRC30044 TMRC30045 TMRC30097 TMRC30075 TMRC30087
## 79.24 85.72 89.75 80.34 73.33 89.90 86.97 83.63
## TMRC30101 TMRC30104 TMRC30114 TMRC30131 TMRC30073
## 88.41 80.29 87.62 86.82 89.26levels(pData(hs_expt[["expressionset"]])[["visitnumber"]]) <- list(
'0' = "notapplicable", '1' = 1, '2' = 2, '3' = 3)Split this data into CDS and lncRNA. Oh crap in order to do that I need to recount the data. Running now (20210518)
## lnc_expt <- create_expt(samplesheet,
## file_column = "hg38100lncfile",
## gene_info = hs_annot)3.1.1.1 Initial metrics
Once the data was loaded, there are a couple of metrics which may be plotted immediately.
nonzero <- plot_nonzero(hs_expt)
nonzero$plot## Warning: ggrepel: 89 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
ncrna_lost_df <- as.data.frame(pData(hs_expt)[["ncrna_lost"]])
rownames(ncrna_lost_df) <- rownames(pData(hs_expt))
colnames(ncrna_lost_df) <- "ncrna_lost"
tmpdf <- merge(nonzero$table, ncrna_lost_df, by = "row.names")
rownames(tmpdf) <- tmpdf[["Row.names"]]
tmpdf[["Row.names"]] <- NULL
ggplot(tmpdf, aes(x=ncrna_lost, y=nonzero_genes)) +
ggplot2::geom_point() +
ggplot2::ggtitle("Nonzero genes with respect to percent counts
lost when ncRNA was removed.")
Najib doesn’t want this plot, but I am using it to check new samples, so will hide it from general use.
libsize <- plot_libsize(hs_expt)
libsize$plot
3.2 Minimum coverage sample filtering
I arbitrarily chose 11,000 non-zero genes as a minimum. We may want this to be higher.
hs_valid <- subset_expt(hs_expt, nonzero = 11000)## The samples (and read coverage) removed when filtering 11000 non-zero genes are:## TMRC30010 TMRC30050 TMRC30052
## 52471 808149 3087347## subset_expt(): There were 119, now there are 116 samples.valid_write <- sm(write_expt(hs_valid, excel = glue("excel/hs_valid-v{ver}.xlsx")))4 Project Aims
The project seeks to determine the relationship of the innate immune response and inflammatory signaling to the clinical outcome of antileishmanial drug treatment. We will test the hypothesis that the profile of innate immune cell activation and their dynamics through the course of treatment differ between CL patients with prospectively determined therapeutic cure or failure.
This will be achieved through the characterization of the in vivo dynamics of blood-derived monocyte, neutrophil and eosinophil transcriptome before, during and at the end of treatment in CL patients. Cell-type specific transcriptomes, composite signatures and time-response expression profiles will be contrasted among patients with therapeutic cure or failure.
4.1 Preparation
To address these, I added to the end of the sample sheet columns named ‘condition’, ‘batch’, ‘donor’, and ‘time’. These are filled in with shorthand values according to the above.
4.2 Global view
Before addressing the questions explicitly by subsetting the data, I want to get a look at the samples as they are.
new_names <- pData(hs_valid)[["samplename"]]
hs_valid <- hs_valid %>%
set_expt_batches(fact = "cellssource") %>%
set_expt_conditions(fact = "typeofcells") %>%
set_expt_samplenames(newnames = new_names)
all_norm <- sm(normalize_expt(hs_valid, transform = "log2", norm = "quant",
convert = "cpm", filter = TRUE))
all_pca <- plot_pca(all_norm, plot_labels = FALSE,
plot_title = "PCA - Cell type", size_column = "visitnumber")
pp(file = glue("images/tmrc3_pca_nolabels-v{ver}.png"), image = all_pca$plot)
write.csv(all_pca$table, file = "coords/hs_donor_pca_coords.csv")
plot_corheat(all_norm, plot_title = "Heirarchical clustering:
cell types")$plot
4.3 Examine samples relevant to clinical outcome
Now let us consider only the samples for which we have a clinical outcome. These fall primarily into either ‘cured’ or ‘failed’, but some people have not yet returned to the clinic after the first or second visit. These are deemed ‘lost’.
hs_clinical <- hs_valid %>%
set_expt_conditions(fact = "clinicaloutcome") %>%
set_expt_batches(fact = "typeofcells") %>%
subset_expt(subset = "typeofcells!='pbmcs'&typeofcells!='macrophages'")## subset_expt(): There were 116, now there are 98 samples.chosen_colors <- c("#D95F02", "#7570B3", "#1B9E77", "#FF0000")
names(chosen_colors) <- c("cure", "failure", "lost", "null")
hs_clinical <- set_expt_colors(hs_clinical, colors = chosen_colors)
newnames <- pData(hs_clinical)[["samplename"]]
hs_clinical <- set_expt_samplenames(hs_clinical, newnames = newnames)
hs_clinical_norm <- sm(normalize_expt(hs_clinical, filter = TRUE, transform = "log2",
convert = "cpm", norm = "quant"))
clinical_pca <- plot_pca(hs_clinical_norm, plot_labels = FALSE,
size_column = "visitnumber", cis = NULL,
plot_title = "PCA - clinical samples")
pp(file = glue("images/all_clinical_nobatch_pca-v{ver}.png"), image = clinical_pca$plot,
height = 8, width = 20)
4.3.1 Repeat without the biopsy samples
hs_clinical_nobiop <- hs_clinical %>%
subset_expt(subset = "typeofcells!='biopsy'")## subset_expt(): There were 98, now there are 58 samples.hs_clinical_nobiop_norm <- sm(normalize_expt(hs_clinical_nobiop, filter = TRUE, transform = "log2",
convert = "cpm", norm = "quant"))
clinical_nobiop_pca <- plot_pca(hs_clinical_nobiop_norm, plot_labels = FALSE, cis = NULL,
plot_title = "PCA - clinical samples without biopsies")
pp(file = glue("images/all_clinical_nobiop_nobatch_pca-v{ver}.png"),
image = clinical_nobiop_pca$plot)
4.3.2 Attempt to correct for the surrogate variables
At this time we have two primary data structures of interest: hs_clinical and hs_clinical_nobiop
hs_clinical_nb <- normalize_expt(hs_clinical, filter = TRUE, batch = "svaseq",
transform = "log2", convert = "cpm")## Removing 5350 low-count genes (14591 remaining).## batch_counts: Before batch/surrogate estimation, 84389 entries are x==0: 6%.## batch_counts: Before batch/surrogate estimation, 245396 entries are 0<x<1: 17%.## Setting 18721 low elements to zero.## transform_counts: Found 18721 values equal to 0, adding 1 to the matrix.clinical_batch_pca <- plot_pca(hs_clinical_nb, plot_labels = FALSE, cis = NULL,
size_column = "visitnumber", plot_title = "PCA - clinical samples")
clinical_batch_pca$plot
hs_clinical_nobiop_nb <- sm(normalize_expt(hs_clinical_nobiop, filter = TRUE, batch = "svaseq",
transform = "log2", convert = "cpm"))
clinical_nobiop_batch_pca <- plot_pca(hs_clinical_nobiop_nb,
plot_title = "PCA - clinical samples without biopsies",
plot_labels = FALSE)
pp(file = "images/clinical_batch.png", image = clinical_nobiop_batch_pca$plot)
test <- plot_pca(hs_clinical_nobiop_nb, size_column = "visitnumber",
plot_title = "PCA - clinical samples without biopsies",
plot_labels = FALSE)
test$plot
clinical_nobiop_batch_tsne <- plot_tsne(hs_clinical_nobiop_nb,
plot_title = "tSNE - clinical samples without biopsies",
plot_labels = FALSE)
clinical_nobiop_batch_tsne$plot
4.3.2.1 Look at remaining variance with variancePartition
test <- simple_varpart(hs_clinical_nobiop)##
## Total:117 stest$partition_plot
4.4 Perform DE of the clinical samples cure vs. fail
individual_celltypes <- subset_expt(hs_clinical_nobiop, subset="condition!='lost'")## subset_expt(): There were 58, now there are 43 samples.hs_clinic_de <- sm(all_pairwise(individual_celltypes, model_batch = "svaseq", filter = TRUE))## Going to attempt to install: Error in e$fun(obj, substitute(ex), parent.frame(), e$data) :
## worker initialization failed: there is no package called ‘hpgltools’## Bioconductor version 3.12 (BiocManager 1.30.10), R 4.0.3 (2020-10-10)## Installing package(s) 'Error in e$fun(obj, substitute(ex), parent.frame(),
## e$data) : worker initialization failed: there is no package called
## ‘hpgltools’'## Warning: package 'Error in e$fun(obj, substitute(ex), parent.frame(), e$data) :
## worker initialization failed: there is no package called ‘hpgltools’' is not available for this version of R
##
## A version of this package for your version of R might be available elsewhere,
## see the ideas at
## https://cran.r-project.org/doc/manuals/r-patched/R-admin.html#Installing-packages## Error in e$fun(obj, substitute(ex), parent.frame(), e$data): worker initialization failed: there is no package called ‘hpgltools’hs_clinic_table <- sm(combine_de_tables(
hs_clinic_de,
excel = glue::glue("excel/individual_celltypes_table-v{ver}.xlsx")))## Error in combine_de_tables(hs_clinic_de, excel = glue::glue("excel/individual_celltypes_table-v{ver}.xlsx")): object 'hs_clinic_de' not foundhs_clinic_sig <- sm(extract_significant_genes(
hs_clinic_table,
excel = glue::glue("excel/individual_celltypes_sig-v{ver}.xlsx")))## Error in extract_significant_genes(hs_clinic_table, excel = glue::glue("excel/individual_celltypes_sig-v{ver}.xlsx")): object 'hs_clinic_table' not foundhs_clinic_sig[["summary_df"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_sig' not foundhs_clinic_de[["comparison"]][["heat"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_de' not found4.4.1 Perform LRT with the clinical samples
I am not sure if we have enough samples across the three visit to completely work as well as we would like, but there is only 1 way to find out! Now that I think about it, one thing which might be awesome is to use cell type as an interacting factor…
4.4.1.1 With biopsy samples
I figure this might be a place where the biopsy samples might prove useful.
clinical_nolost <- subset_expt(hs_clinical, subset="condition!='lost'")## subset_expt(): There were 98, now there are 81 samples.lrt_visit_clinical_test <- deseq_lrt(clinical_nolost, transform = "vst",
interactor_column = "visitnumber",
interest_column = "clinicaloutcome")## converting counts to integer mode## estimating size factors## estimating dispersions## gene-wise dispersion estimates## mean-dispersion relationship## final dispersion estimates## fitting model and testing## -- replacing outliers and refitting for 473 genes
## -- DESeq argument 'minReplicatesForReplace' = 7
## -- original counts are preserved in counts(dds)## estimating dispersions## fitting model and testing## Working with 13 genes.## Warning: `distinct_()` was deprecated in dplyr 0.7.0.
## Please use `distinct()` instead.
## See vignette('programming') for more help## Working with 10 genes after filtering: minc > 3## Joining, by = "merge"
## Joining, by = "merge"
lrt_visit_clinical_test[["favorite_genes"]]## genes cluster
## ENSG00000103355 ENSG00000103355 1
## ENSG00000105205 ENSG00000105205 1
## ENSG00000105366 ENSG00000105366 2
## ENSG00000112053 ENSG00000112053 1
## ENSG00000130433 ENSG00000130433 1
## ENSG00000133317 ENSG00000133317 1
## ENSG00000161905 ENSG00000161905 2
## ENSG00000183134 ENSG00000183134 2
## ENSG00000188897 ENSG00000188897 1
## ENSG00000213759 ENSG00000213759 2lrt_celltype_clinical_test <- deseq_lrt(clinical_nolost, transform = "vst",
interactor_column = "typeofcells",
interest_column = "clinicaloutcome")## converting counts to integer mode## estimating size factors## estimating dispersions## gene-wise dispersion estimates## mean-dispersion relationship## final dispersion estimates## fitting model and testing## -- replacing outliers and refitting for 61 genes
## -- DESeq argument 'minReplicatesForReplace' = 7
## -- original counts are preserved in counts(dds)## estimating dispersions## fitting model and testing## Working with 2051 genes.## Working with 2051 genes after filtering: minc > 3## Joining, by = "merge"
## Joining, by = "merge"
lrt_celltype_clinical_test[["favorite_genes"]]## genes cluster
## ENSG00000001497 ENSG00000001497 1
## ENSG00000002016 ENSG00000002016 2
## ENSG00000003137 ENSG00000003137 3
## ENSG00000004455 ENSG00000004455 1
## ENSG00000004777 ENSG00000004777 4
## ENSG00000004846 ENSG00000004846 5
## ENSG00000004961 ENSG00000004961 6
## ENSG00000005020 ENSG00000005020 7
## ENSG00000005022 ENSG00000005022 8
## ENSG00000005075 ENSG00000005075 9
## ENSG00000005238 ENSG00000005238 9
## ENSG00000005302 ENSG00000005302 10
## ENSG00000005486 ENSG00000005486 11
## ENSG00000005801 ENSG00000005801 1
## ENSG00000005884 ENSG00000005884 6
## ENSG00000006007 ENSG00000006007 12
## ENSG00000006607 ENSG00000006607 13
## ENSG00000006652 ENSG00000006652 10
## ENSG00000006747 ENSG00000006747 14
## ENSG00000006788 ENSG00000006788 14
## ENSG00000006831 ENSG00000006831 15
## ENSG00000007047 ENSG00000007047 9
## ENSG00000007264 ENSG00000007264 6
## ENSG00000007341 ENSG00000007341 16
## ENSG00000007392 ENSG00000007392 13
## ENSG00000007923 ENSG00000007923 8
## ENSG00000007944 ENSG00000007944 17
## ENSG00000007952 ENSG00000007952 1
## ENSG00000008018 ENSG00000008018 5
## ENSG00000008056 ENSG00000008056 18
## ENSG00000008086 ENSG00000008086 10
## ENSG00000008405 ENSG00000008405 19
## ENSG00000008710 ENSG00000008710 8
## ENSG00000010278 ENSG00000010278 13
## ENSG00000010704 ENSG00000010704 12
## ENSG00000010818 ENSG00000010818 12
## ENSG00000010932 ENSG00000010932 5
## ENSG00000011028 ENSG00000011028 5
## ENSG00000011105 ENSG00000011105 1
## ENSG00000011143 ENSG00000011143 1
## ENSG00000011422 ENSG00000011422 17
## ENSG00000011426 ENSG00000011426 19
## ENSG00000011465 ENSG00000011465 3
## ENSG00000011523 ENSG00000011523 10
## ENSG00000012963 ENSG00000012963 5
## ENSG00000013306 ENSG00000013306 1
## ENSG00000013392 ENSG00000013392 1
## ENSG00000013503 ENSG00000013503 13
## ENSG00000013583 ENSG00000013583 20
## ENSG00000013725 ENSG00000013725 6
## ENSG00000013810 ENSG00000013810 17
## ENSG00000018610 ENSG00000018610 8
## ENSG00000019144 ENSG00000019144 1
## ENSG00000019485 ENSG00000019485 21
## ENSG00000019991 ENSG00000019991 20
## ENSG00000020129 ENSG00000020129 1
## ENSG00000020256 ENSG00000020256 22
## ENSG00000020577 ENSG00000020577 6
## ENSG00000020633 ENSG00000020633 23
## ENSG00000021355 ENSG00000021355 24
## ENSG00000022976 ENSG00000022976 10
## ENSG00000023171 ENSG00000023171 25
## ENSG00000023516 ENSG00000023516 1
## ENSG00000024048 ENSG00000024048 17
## ENSG00000024526 ENSG00000024526 19
## ENSG00000026950 ENSG00000026950 10
## ENSG00000027847 ENSG00000027847 21
## ENSG00000028203 ENSG00000028203 1
## ENSG00000030066 ENSG00000030066 13
## ENSG00000035115 ENSG00000035115 1
## ENSG00000035720 ENSG00000035720 13
## ENSG00000038274 ENSG00000038274 26
## ENSG00000038945 ENSG00000038945 6
## ENSG00000039560 ENSG00000039560 3
## ENSG00000040199 ENSG00000040199 1
## ENSG00000041802 ENSG00000041802 21
## ENSG00000042062 ENSG00000042062 19
## ENSG00000042088 ENSG00000042088 1
## ENSG00000042445 ENSG00000042445 3
## ENSG00000044459 ENSG00000044459 20
## ENSG00000046647 ENSG00000046647 1
## ENSG00000047315 ENSG00000047315 5
## ENSG00000047365 ENSG00000047365 8
## ENSG00000048342 ENSG00000048342 17
## ENSG00000048828 ENSG00000048828 7
## ENSG00000049541 ENSG00000049541 27
## ENSG00000050327 ENSG00000050327 5
## ENSG00000051825 ENSG00000051825 1
## ENSG00000053900 ENSG00000053900 13
## ENSG00000054118 ENSG00000054118 28
## ENSG00000054277 ENSG00000054277 8
## ENSG00000054282 ENSG00000054282 21
## ENSG00000054392 ENSG00000054392 1
## ENSG00000054965 ENSG00000054965 17
## ENSG00000055130 ENSG00000055130 8
## ENSG00000055208 ENSG00000055208 24
## ENSG00000055332 ENSG00000055332 10
## ENSG00000055483 ENSG00000055483 21
## ENSG00000057704 ENSG00000057704 17
## ENSG00000057935 ENSG00000057935 1
## ENSG00000058600 ENSG00000058600 1
## ENSG00000059573 ENSG00000059573 1
## ENSG00000059588 ENSG00000059588 1
## ENSG00000060138 ENSG00000060138 8
## ENSG00000060558 ENSG00000060558 29
## ENSG00000060566 ENSG00000060566 11
## ENSG00000060762 ENSG00000060762 18
## ENSG00000060982 ENSG00000060982 6
## ENSG00000061918 ENSG00000061918 1
## ENSG00000062038 ENSG00000062038 5
## ENSG00000062598 ENSG00000062598 10
## ENSG00000063761 ENSG00000063761 21
## ENSG00000064313 ENSG00000064313 11
## ENSG00000064763 ENSG00000064763 10
## ENSG00000065060 ENSG00000065060 21
## ENSG00000065150 ENSG00000065150 1
## ENSG00000065809 ENSG00000065809 11
## ENSG00000065882 ENSG00000065882 17
## ENSG00000065989 ENSG00000065989 21
## ENSG00000066032 ENSG00000066032 18
## ENSG00000066279 ENSG00000066279 19
## ENSG00000066294 ENSG00000066294 21
## ENSG00000066379 ENSG00000066379 5
## ENSG00000066427 ENSG00000066427 7
## ENSG00000066455 ENSG00000066455 19
## ENSG00000066651 ENSG00000066651 1
## ENSG00000066926 ENSG00000066926 1
## ENSG00000067533 ENSG00000067533 1
## ENSG00000067560 ENSG00000067560 9
## ENSG00000068305 ENSG00000068305 9
## ENSG00000068784 ENSG00000068784 4
## ENSG00000069020 ENSG00000069020 19
## ENSG00000069248 ENSG00000069248 1
## ENSG00000069345 ENSG00000069345 11
## ENSG00000069998 ENSG00000069998 8
## ENSG00000070010 ENSG00000070010 17
## ENSG00000070087 ENSG00000070087 27
## ENSG00000070269 ENSG00000070269 10
## ENSG00000070495 ENSG00000070495 17
## ENSG00000070614 ENSG00000070614 9
## ENSG00000070785 ENSG00000070785 1
## ENSG00000070814 ENSG00000070814 29
## ENSG00000071054 ENSG00000071054 12
## ENSG00000071073 ENSG00000071073 30
## ENSG00000071242 ENSG00000071242 4
## ENSG00000071462 ENSG00000071462 8
## ENSG00000071575 ENSG00000071575 19
## ENSG00000071655 ENSG00000071655 8
## ENSG00000072506 ENSG00000072506 1
## ENSG00000072657 ENSG00000072657 2
## ENSG00000072694 ENSG00000072694 16
## ENSG00000072858 ENSG00000072858 22
## ENSG00000073150 ENSG00000073150 17
## ENSG00000073417 ENSG00000073417 21
## ENSG00000073614 ENSG00000073614 17
## ENSG00000073737 ENSG00000073737 10
## ENSG00000073754 ENSG00000073754 2
## ENSG00000073792 ENSG00000073792 8
## ENSG00000073969 ENSG00000073969 6
## ENSG00000074319 ENSG00000074319 28
## ENSG00000074416 ENSG00000074416 1
## ENSG00000074603 ENSG00000074603 25
## ENSG00000074660 ENSG00000074660 12
## ENSG00000074800 ENSG00000074800 8
## ENSG00000074842 ENSG00000074842 1
## ENSG00000074935 ENSG00000074935 1
## ENSG00000075223 ENSG00000075223 6
## ENSG00000075340 ENSG00000075340 1
## ENSG00000075539 ENSG00000075539 10
## ENSG00000075643 ENSG00000075643 1
## ENSG00000075785 ENSG00000075785 12
## ENSG00000075856 ENSG00000075856 15
## ENSG00000075914 ENSG00000075914 1
## ENSG00000076242 ENSG00000076242 1
## ENSG00000076351 ENSG00000076351 6
## ENSG00000076716 ENSG00000076716 6
## ENSG00000076984 ENSG00000076984 9
## ENSG00000077152 ENSG00000077152 19
## ENSG00000077420 ENSG00000077420 9
## ENSG00000077616 ENSG00000077616 22
## ENSG00000077782 ENSG00000077782 3
## ENSG00000077935 ENSG00000077935 31
## ENSG00000078053 ENSG00000078053 6
## ENSG00000078098 ENSG00000078098 3
## ENSG00000078114 ENSG00000078114 3
## ENSG00000078269 ENSG00000078269 31
## ENSG00000078369 ENSG00000078369 9
## ENSG00000078403 ENSG00000078403 32
## ENSG00000078487 ENSG00000078487 7
## ENSG00000078589 ENSG00000078589 4
## ENSG00000079134 ENSG00000079134 1
## ENSG00000079215 ENSG00000079215 1
## ENSG00000079308 ENSG00000079308 1
## ENSG00000079337 ENSG00000079337 16
## ENSG00000079459 ENSG00000079459 5
## ENSG00000079482 ENSG00000079482 14
## ENSG00000079616 ENSG00000079616 13
## ENSG00000079841 ENSG00000079841 4
## ENSG00000079974 ENSG00000079974 21
## ENSG00000080200 ENSG00000080200 1
## ENSG00000081059 ENSG00000081059 13
## ENSG00000081386 ENSG00000081386 1
## ENSG00000081913 ENSG00000081913 27
## ENSG00000082146 ENSG00000082146 1
## ENSG00000082458 ENSG00000082458 19
## ENSG00000082512 ENSG00000082512 1
## ENSG00000082516 ENSG00000082516 1
## ENSG00000082701 ENSG00000082701 17
## ENSG00000082898 ENSG00000082898 2
## ENSG00000083099 ENSG00000083099 1
## ENSG00000083290 ENSG00000083290 8
## ENSG00000083307 ENSG00000083307 5
## ENSG00000083457 ENSG00000083457 30
## ENSG00000083812 ENSG00000083812 10
## ENSG00000083828 ENSG00000083828 17
## ENSG00000083845 ENSG00000083845 1
## ENSG00000084090 ENSG00000084090 1
## ENSG00000084112 ENSG00000084112 11
## ENSG00000084207 ENSG00000084207 8
## ENSG00000084463 ENSG00000084463 9
## ENSG00000084623 ENSG00000084623 8
## ENSG00000084652 ENSG00000084652 6
## ENSG00000085265 ENSG00000085265 18
## ENSG00000085365 ENSG00000085365 2
## ENSG00000085415 ENSG00000085415 1
## ENSG00000085719 ENSG00000085719 2
## ENSG00000085760 ENSG00000085760 1
## ENSG00000085840 ENSG00000085840 13
## ENSG00000085871 ENSG00000085871 28
## ENSG00000085978 ENSG00000085978 11
## ENSG00000085982 ENSG00000085982 1
## ENSG00000085999 ENSG00000085999 1
## ENSG00000086102 ENSG00000086102 13
## ENSG00000086205 ENSG00000086205 5
## ENSG00000086589 ENSG00000086589 17
## ENSG00000086730 ENSG00000086730 24
## ENSG00000087253 ENSG00000087253 25
## ENSG00000087269 ENSG00000087269 1
## ENSG00000087448 ENSG00000087448 1
## ENSG00000088325 ENSG00000088325 19
## ENSG00000088726 ENSG00000088726 1
## ENSG00000088827 ENSG00000088827 20
## ENSG00000088992 ENSG00000088992 29
## ENSG00000089012 ENSG00000089012 2
## ENSG00000089048 ENSG00000089048 1
## ENSG00000089123 ENSG00000089123 1
## ENSG00000089127 ENSG00000089127 33
## ENSG00000089159 ENSG00000089159 17
## ENSG00000089195 ENSG00000089195 8
## ENSG00000089199 ENSG00000089199 19
## ENSG00000089234 ENSG00000089234 17
## ENSG00000089280 ENSG00000089280 17
## ENSG00000089558 ENSG00000089558 9
## ENSG00000089818 ENSG00000089818 17
## ENSG00000090013 ENSG00000090013 20
## ENSG00000090530 ENSG00000090530 6
## ENSG00000090674 ENSG00000090674 11
## ENSG00000090857 ENSG00000090857 23
## ENSG00000090889 ENSG00000090889 19
## ENSG00000091127 ENSG00000091127 6
## ENSG00000091409 ENSG00000091409 19
## ENSG00000091640 ENSG00000091640 8
## ENSG00000091844 ENSG00000091844 5
## ENSG00000091972 ENSG00000091972 5
## ENSG00000091986 ENSG00000091986 2
## ENSG00000092067 ENSG00000092067 11
## ENSG00000092847 ENSG00000092847 11
## ENSG00000092871 ENSG00000092871 17
## ENSG00000093000 ENSG00000093000 25
## ENSG00000093217 ENSG00000093217 6
## ENSG00000094841 ENSG00000094841 1
## ENSG00000095319 ENSG00000095319 1
## ENSG00000097021 ENSG00000097021 1
## ENSG00000099139 ENSG00000099139 8
## ENSG00000099194 ENSG00000099194 1
## ENSG00000099341 ENSG00000099341 8
## ENSG00000099381 ENSG00000099381 21
## ENSG00000099715 ENSG00000099715 31
## ENSG00000099783 ENSG00000099783 29
## ENSG00000099800 ENSG00000099800 1
## ENSG00000100029 ENSG00000100029 1
## ENSG00000100036 ENSG00000100036 8
## ENSG00000100060 ENSG00000100060 11
## ENSG00000100065 ENSG00000100065 1
## ENSG00000100068 ENSG00000100068 23
## ENSG00000100097 ENSG00000100097 8
## ENSG00000100124 ENSG00000100124 19
## ENSG00000100138 ENSG00000100138 1
## ENSG00000100151 ENSG00000100151 11
## ENSG00000100167 ENSG00000100167 19
## ENSG00000100211 ENSG00000100211 19
## ENSG00000100216 ENSG00000100216 1
## ENSG00000100281 ENSG00000100281 29
## ENSG00000100288 ENSG00000100288 1
## ENSG00000100292 ENSG00000100292 8
## ENSG00000100294 ENSG00000100294 12
## ENSG00000100320 ENSG00000100320 1
## ENSG00000100335 ENSG00000100335 21
## ENSG00000100353 ENSG00000100353 8
## ENSG00000100354 ENSG00000100354 17
## ENSG00000100376 ENSG00000100376 8
## ENSG00000100413 ENSG00000100413 21
## ENSG00000100426 ENSG00000100426 21
## ENSG00000100558 ENSG00000100558 1
## ENSG00000100577 ENSG00000100577 1
## ENSG00000100596 ENSG00000100596 7
## ENSG00000100600 ENSG00000100600 6
## ENSG00000100652 ENSG00000100652 10
## ENSG00000100767 ENSG00000100767 16
## ENSG00000100842 ENSG00000100842 2
## ENSG00000100941 ENSG00000100941 11
## ENSG00000100997 ENSG00000100997 1
## ENSG00000101000 ENSG00000101000 3
## ENSG00000101019 ENSG00000101019 22
## ENSG00000101040 ENSG00000101040 4
## ENSG00000101082 ENSG00000101082 19
## ENSG00000101096 ENSG00000101096 13
## ENSG00000101146 ENSG00000101146 11
## ENSG00000101182 ENSG00000101182 8
## ENSG00000101188 ENSG00000101188 12
## ENSG00000101189 ENSG00000101189 29
## ENSG00000101255 ENSG00000101255 18
## ENSG00000101342 ENSG00000101342 33
## ENSG00000101347 ENSG00000101347 12
## ENSG00000101350 ENSG00000101350 30
## ENSG00000101365 ENSG00000101365 29
## ENSG00000101384 ENSG00000101384 13
## ENSG00000101391 ENSG00000101391 8
## ENSG00000101421 ENSG00000101421 18
## ENSG00000101445 ENSG00000101445 13
## ENSG00000101447 ENSG00000101447 1
## ENSG00000101542 ENSG00000101542 1
## ENSG00000101608 ENSG00000101608 3
## ENSG00000101665 ENSG00000101665 23
## ENSG00000101844 ENSG00000101844 19
## ENSG00000101974 ENSG00000101974 13
## ENSG00000102007 ENSG00000102007 9
## ENSG00000102034 ENSG00000102034 11
## ENSG00000102043 ENSG00000102043 1
## ENSG00000102048 ENSG00000102048 6
## ENSG00000102057 ENSG00000102057 17
## ENSG00000102144 ENSG00000102144 18
## ENSG00000102221 ENSG00000102221 6
## ENSG00000102290 ENSG00000102290 8
## ENSG00000102317 ENSG00000102317 1
## ENSG00000102384 ENSG00000102384 19
## ENSG00000102409 ENSG00000102409 1
## ENSG00000102531 ENSG00000102531 16
## ENSG00000102572 ENSG00000102572 9
## ENSG00000102606 ENSG00000102606 21
## ENSG00000102738 ENSG00000102738 1
## ENSG00000102743 ENSG00000102743 1
## ENSG00000102753 ENSG00000102753 1
## ENSG00000102893 ENSG00000102893 32
## ENSG00000102967 ENSG00000102967 12
## ENSG00000102978 ENSG00000102978 24
## ENSG00000103035 ENSG00000103035 14
## ENSG00000103042 ENSG00000103042 8
## ENSG00000103047 ENSG00000103047 8
## ENSG00000103148 ENSG00000103148 8
## ENSG00000103257 ENSG00000103257 14
## ENSG00000103274 ENSG00000103274 8
## ENSG00000103319 ENSG00000103319 22
## ENSG00000103351 ENSG00000103351 19
## ENSG00000103365 ENSG00000103365 21
## ENSG00000103423 ENSG00000103423 1
## ENSG00000103429 ENSG00000103429 8
## ENSG00000103512 ENSG00000103512 21
## ENSG00000103522 ENSG00000103522 6
## ENSG00000103855 ENSG00000103855 6
## ENSG00000103876 ENSG00000103876 30
## ENSG00000103966 ENSG00000103966 8
## ENSG00000104067 ENSG00000104067 2
## ENSG00000104133 ENSG00000104133 17
## ENSG00000104154 ENSG00000104154 1
## ENSG00000104218 ENSG00000104218 1
## ENSG00000104321 ENSG00000104321 3
## ENSG00000104450 ENSG00000104450 10
## ENSG00000104522 ENSG00000104522 5
## ENSG00000104611 ENSG00000104611 28
## ENSG00000104689 ENSG00000104689 8
## ENSG00000104691 ENSG00000104691 6
## ENSG00000104731 ENSG00000104731 1
## ENSG00000104881 ENSG00000104881 1
## ENSG00000104885 ENSG00000104885 29
## ENSG00000104969 ENSG00000104969 9
## ENSG00000104980 ENSG00000104980 1
## ENSG00000104998 ENSG00000104998 8
## ENSG00000105127 ENSG00000105127 17
## ENSG00000105137 ENSG00000105137 2
## ENSG00000105146 ENSG00000105146 19
## ENSG00000105173 ENSG00000105173 1
## ENSG00000105186 ENSG00000105186 4
## ENSG00000105202 ENSG00000105202 1
## ENSG00000105245 ENSG00000105245 26
## ENSG00000105278 ENSG00000105278 16
## ENSG00000105366 ENSG00000105366 13
## ENSG00000105374 ENSG00000105374 1
## ENSG00000105483 ENSG00000105483 10
## ENSG00000105499 ENSG00000105499 6
## ENSG00000105552 ENSG00000105552 1
## ENSG00000105576 ENSG00000105576 19
## ENSG00000105612 ENSG00000105612 8
## ENSG00000105656 ENSG00000105656 9
## ENSG00000105668 ENSG00000105668 2
## ENSG00000105792 ENSG00000105792 19
## ENSG00000105939 ENSG00000105939 10
## ENSG00000105948 ENSG00000105948 16
## ENSG00000105967 ENSG00000105967 20
## ENSG00000105968 ENSG00000105968 30
## ENSG00000105996 ENSG00000105996 17
## ENSG00000105997 ENSG00000105997 16
## ENSG00000106025 ENSG00000106025 19
## ENSG00000106034 ENSG00000106034 6
## ENSG00000106100 ENSG00000106100 25
## ENSG00000106153 ENSG00000106153 8
## ENSG00000106245 ENSG00000106245 17
## ENSG00000106305 ENSG00000106305 1
## ENSG00000106366 ENSG00000106366 1
## ENSG00000106404 ENSG00000106404 25
## ENSG00000106560 ENSG00000106560 6
## ENSG00000106603 ENSG00000106603 17
## ENSG00000106609 ENSG00000106609 30
## ENSG00000106617 ENSG00000106617 9
## ENSG00000106628 ENSG00000106628 1
## ENSG00000106635 ENSG00000106635 29
## ENSG00000106638 ENSG00000106638 1
## ENSG00000106804 ENSG00000106804 33
## ENSG00000106991 ENSG00000106991 8
## ENSG00000107130 ENSG00000107130 5
## ENSG00000107164 ENSG00000107164 8
## ENSG00000107175 ENSG00000107175 27
## ENSG00000107185 ENSG00000107185 17
## ENSG00000107223 ENSG00000107223 1
## ENSG00000107341 ENSG00000107341 9
## ENSG00000107438 ENSG00000107438 13
## ENSG00000107669 ENSG00000107669 22
## ENSG00000107719 ENSG00000107719 14
## ENSG00000107731 ENSG00000107731 1
## ENSG00000107742 ENSG00000107742 5
## ENSG00000107758 ENSG00000107758 1
## ENSG00000107798 ENSG00000107798 6
## ENSG00000107816 ENSG00000107816 1
## ENSG00000107864 ENSG00000107864 25
## ENSG00000107937 ENSG00000107937 1
## ENSG00000107959 ENSG00000107959 1
## ENSG00000108039 ENSG00000108039 8
## ENSG00000108179 ENSG00000108179 18
## ENSG00000108219 ENSG00000108219 29
## ENSG00000108389 ENSG00000108389 10
## ENSG00000108395 ENSG00000108395 13
## ENSG00000108423 ENSG00000108423 16
## ENSG00000108439 ENSG00000108439 1
## ENSG00000108468 ENSG00000108468 3
## ENSG00000108557 ENSG00000108557 21
## ENSG00000108599 ENSG00000108599 17
## ENSG00000108671 ENSG00000108671 1
## ENSG00000108679 ENSG00000108679 6
## ENSG00000108684 ENSG00000108684 11
## ENSG00000108700 ENSG00000108700 3
## ENSG00000108771 ENSG00000108771 10
## ENSG00000108773 ENSG00000108773 20
## ENSG00000108774 ENSG00000108774 7
## ENSG00000108798 ENSG00000108798 18
## ENSG00000108946 ENSG00000108946 16
## ENSG00000108960 ENSG00000108960 13
## ENSG00000108963 ENSG00000108963 8
## ENSG00000109111 ENSG00000109111 11
## ENSG00000109113 ENSG00000109113 8
## ENSG00000109182 ENSG00000109182 14
## ENSG00000109472 ENSG00000109472 6
## ENSG00000109501 ENSG00000109501 1
## ENSG00000109685 ENSG00000109685 13
## ENSG00000109814 ENSG00000109814 1
## ENSG00000109917 ENSG00000109917 21
## ENSG00000109919 ENSG00000109919 1
## ENSG00000109920 ENSG00000109920 21
## ENSG00000109944 ENSG00000109944 1
## ENSG00000109971 ENSG00000109971 1
## ENSG00000110046 ENSG00000110046 17
## ENSG00000110048 ENSG00000110048 4
## ENSG00000110092 ENSG00000110092 1
## ENSG00000110171 ENSG00000110171 21
## ENSG00000110200 ENSG00000110200 21
## ENSG00000110203 ENSG00000110203 9
## ENSG00000110218 ENSG00000110218 1
## ENSG00000110237 ENSG00000110237 6
## ENSG00000110514 ENSG00000110514 21
## ENSG00000110660 ENSG00000110660 1
## ENSG00000110665 ENSG00000110665 25
## ENSG00000110713 ENSG00000110713 17
## ENSG00000110844 ENSG00000110844 1
## ENSG00000110851 ENSG00000110851 13
## ENSG00000110880 ENSG00000110880 18
## ENSG00000110906 ENSG00000110906 11
## ENSG00000111057 ENSG00000111057 5
## ENSG00000111144 ENSG00000111144 12
## ENSG00000111145 ENSG00000111145 12
## ENSG00000111331 ENSG00000111331 7
## ENSG00000111335 ENSG00000111335 3
## ENSG00000111361 ENSG00000111361 1
## ENSG00000111424 ENSG00000111424 18
## ENSG00000111450 ENSG00000111450 30
## ENSG00000111481 ENSG00000111481 1
## ENSG00000111640 ENSG00000111640 8
## ENSG00000111696 ENSG00000111696 3
## ENSG00000111725 ENSG00000111725 11
## ENSG00000111785 ENSG00000111785 1
## ENSG00000111801 ENSG00000111801 2
## ENSG00000111817 ENSG00000111817 18
## ENSG00000111850 ENSG00000111850 16
## ENSG00000111863 ENSG00000111863 1
## ENSG00000111877 ENSG00000111877 25
## ENSG00000111886 ENSG00000111886 17
## ENSG00000111911 ENSG00000111911 3
## ENSG00000112033 ENSG00000112033 9
## ENSG00000112079 ENSG00000112079 17
## ENSG00000112130 ENSG00000112130 1
## ENSG00000112139 ENSG00000112139 3
## ENSG00000112144 ENSG00000112144 1
## ENSG00000112234 ENSG00000112234 26
## ENSG00000112242 ENSG00000112242 9
## ENSG00000112245 ENSG00000112245 8
## ENSG00000112299 ENSG00000112299 12
## ENSG00000112367 ENSG00000112367 17
## ENSG00000112419 ENSG00000112419 25
## ENSG00000112599 ENSG00000112599 17
## ENSG00000112655 ENSG00000112655 19
## ENSG00000112715 ENSG00000112715 11
## ENSG00000112773 ENSG00000112773 25
## ENSG00000113048 ENSG00000113048 1
## ENSG00000113108 ENSG00000113108 12
## ENSG00000113194 ENSG00000113194 28
## ENSG00000113272 ENSG00000113272 1
## ENSG00000113273 ENSG00000113273 23
## ENSG00000113360 ENSG00000113360 1
## ENSG00000113384 ENSG00000113384 20
## ENSG00000113430 ENSG00000113430 6
## ENSG00000113569 ENSG00000113569 13
## ENSG00000113645 ENSG00000113645 19
## ENSG00000113649 ENSG00000113649 8
## ENSG00000113716 ENSG00000113716 21
## ENSG00000113758 ENSG00000113758 16
## ENSG00000113761 ENSG00000113761 17
## ENSG00000114423 ENSG00000114423 13
## ENSG00000114439 ENSG00000114439 4
## ENSG00000114450 ENSG00000114450 3
## ENSG00000114544 ENSG00000114544 8
## ENSG00000114554 ENSG00000114554 1
## ENSG00000114739 ENSG00000114739 1
## ENSG00000114861 ENSG00000114861 16
## ENSG00000114982 ENSG00000114982 11
## ENSG00000115109 ENSG00000115109 16
## ENSG00000115155 ENSG00000115155 7
## ENSG00000115159 ENSG00000115159 2
## ENSG00000115170 ENSG00000115170 1
## ENSG00000115204 ENSG00000115204 8
## ENSG00000115232 ENSG00000115232 23
## ENSG00000115414 ENSG00000115414 6
## ENSG00000115421 ENSG00000115421 10
## ENSG00000115423 ENSG00000115423 31
## ENSG00000115446 ENSG00000115446 13
## ENSG00000115459 ENSG00000115459 23
## ENSG00000115592 ENSG00000115592 12
## ENSG00000115598 ENSG00000115598 3
## ENSG00000115648 ENSG00000115648 2
## ENSG00000115718 ENSG00000115718 12
## ENSG00000115738 ENSG00000115738 30
## ENSG00000115761 ENSG00000115761 1
## ENSG00000115762 ENSG00000115762 18
## ENSG00000115828 ENSG00000115828 12
## ENSG00000115904 ENSG00000115904 2
## ENSG00000115919 ENSG00000115919 20
## ENSG00000115963 ENSG00000115963 2
## ENSG00000116120 ENSG00000116120 1
## ENSG00000116127 ENSG00000116127 13
## ENSG00000116132 ENSG00000116132 3
## ENSG00000116141 ENSG00000116141 5
## ENSG00000116157 ENSG00000116157 1
## ENSG00000116478 ENSG00000116478 4
## ENSG00000116497 ENSG00000116497 26
## ENSG00000116514 ENSG00000116514 9
## ENSG00000116649 ENSG00000116649 1
## ENSG00000116678 ENSG00000116678 2
## ENSG00000116688 ENSG00000116688 24
## ENSG00000116729 ENSG00000116729 12
## ENSG00000116761 ENSG00000116761 2
## ENSG00000116791 ENSG00000116791 1
## ENSG00000116815 ENSG00000116815 17
## ENSG00000116871 ENSG00000116871 9
## ENSG00000116874 ENSG00000116874 1
## ENSG00000116898 ENSG00000116898 6
## ENSG00000116984 ENSG00000116984 22
## ENSG00000117118 ENSG00000117118 27
## ENSG00000117226 ENSG00000117226 3
## ENSG00000117228 ENSG00000117228 12
## ENSG00000117298 ENSG00000117298 9
## ENSG00000117362 ENSG00000117362 29
## ENSG00000117399 ENSG00000117399 5
## ENSG00000117448 ENSG00000117448 1
## ENSG00000117481 ENSG00000117481 30
## ENSG00000117501 ENSG00000117501 2
## ENSG00000117505 ENSG00000117505 11
## ENSG00000117595 ENSG00000117595 19
## ENSG00000117597 ENSG00000117597 1
## ENSG00000117632 ENSG00000117632 1
## ENSG00000117643 ENSG00000117643 1
## ENSG00000117697 ENSG00000117697 2
## ENSG00000117724 ENSG00000117724 1
## ENSG00000117751 ENSG00000117751 6
## ENSG00000117834 ENSG00000117834 25
## ENSG00000118004 ENSG00000118004 14
## ENSG00000118412 ENSG00000118412 2
## ENSG00000118513 ENSG00000118513 13
## ENSG00000118680 ENSG00000118680 28
## ENSG00000118946 ENSG00000118946 19
## ENSG00000118961 ENSG00000118961 1
## ENSG00000119203 ENSG00000119203 1
## ENSG00000119231 ENSG00000119231 24
## ENSG00000119397 ENSG00000119397 25
## ENSG00000119471 ENSG00000119471 16
## ENSG00000119523 ENSG00000119523 1
## ENSG00000119669 ENSG00000119669 18
## ENSG00000119682 ENSG00000119682 17
## ENSG00000119698 ENSG00000119698 27
## ENSG00000119714 ENSG00000119714 26
## ENSG00000119865 ENSG00000119865 2
## ENSG00000119915 ENSG00000119915 6
## ENSG00000120008 ENSG00000120008 8
## ENSG00000120053 ENSG00000120053 1
## ENSG00000120055 ENSG00000120055 1
## ENSG00000120158 ENSG00000120158 14
## ENSG00000120162 ENSG00000120162 3
## ENSG00000120254 ENSG00000120254 6
## ENSG00000120262 ENSG00000120262 25
## ENSG00000120278 ENSG00000120278 6
## ENSG00000120675 ENSG00000120675 1
## ENSG00000120690 ENSG00000120690 17
## ENSG00000120696 ENSG00000120696 16
## ENSG00000120798 ENSG00000120798 13
## ENSG00000120833 ENSG00000120833 22
## ENSG00000120868 ENSG00000120868 17
## ENSG00000120907 ENSG00000120907 5
## ENSG00000120949 ENSG00000120949 18
## ENSG00000121022 ENSG00000121022 19
## ENSG00000121057 ENSG00000121057 1
## ENSG00000121060 ENSG00000121060 7
## ENSG00000121152 ENSG00000121152 19
## ENSG00000121410 ENSG00000121410 1
## ENSG00000121454 ENSG00000121454 24
## ENSG00000121653 ENSG00000121653 29
## ENSG00000121691 ENSG00000121691 25
## ENSG00000121774 ENSG00000121774 9
## ENSG00000121807 ENSG00000121807 8
## ENSG00000121897 ENSG00000121897 1
## ENSG00000122224 ENSG00000122224 22
## ENSG00000122299 ENSG00000122299 9
## ENSG00000122386 ENSG00000122386 1
## ENSG00000122483 ENSG00000122483 25
## ENSG00000122543 ENSG00000122543 23
## ENSG00000122557 ENSG00000122557 11
## ENSG00000122642 ENSG00000122642 2
## ENSG00000122705 ENSG00000122705 6
## ENSG00000122729 ENSG00000122729 16
## ENSG00000122965 ENSG00000122965 8
## ENSG00000123159 ENSG00000123159 6
## ENSG00000123213 ENSG00000123213 20
## ENSG00000123384 ENSG00000123384 8
## ENSG00000123595 ENSG00000123595 1
## ENSG00000123607 ENSG00000123607 33
## ENSG00000123643 ENSG00000123643 9
## ENSG00000123838 ENSG00000123838 12
## ENSG00000124145 ENSG00000124145 1
## ENSG00000124151 ENSG00000124151 9
## ENSG00000124177 ENSG00000124177 21
## ENSG00000124181 ENSG00000124181 1
## ENSG00000124225 ENSG00000124225 1
## ENSG00000124313 ENSG00000124313 21
## ENSG00000124357 ENSG00000124357 7
## ENSG00000124374 ENSG00000124374 19
## ENSG00000124380 ENSG00000124380 1
## ENSG00000124486 ENSG00000124486 28
## ENSG00000124571 ENSG00000124571 1
## ENSG00000124762 ENSG00000124762 8
## ENSG00000124766 ENSG00000124766 1
## ENSG00000124780 ENSG00000124780 13
## ENSG00000124784 ENSG00000124784 1
## ENSG00000124785 ENSG00000124785 3
## ENSG00000124789 ENSG00000124789 17
## ENSG00000124882 ENSG00000124882 22
## ENSG00000125037 ENSG00000125037 27
## ENSG00000125247 ENSG00000125247 1
## ENSG00000125375 ENSG00000125375 30
## ENSG00000125434 ENSG00000125434 21
## ENSG00000125551 ENSG00000125551 10
## ENSG00000125630 ENSG00000125630 1
## ENSG00000125650 ENSG00000125650 3
## ENSG00000125703 ENSG00000125703 1
## ENSG00000125731 ENSG00000125731 2
## ENSG00000125733 ENSG00000125733 6
## ENSG00000125735 ENSG00000125735 17
## ENSG00000125741 ENSG00000125741 7
## ENSG00000125753 ENSG00000125753 9
## ENSG00000125772 ENSG00000125772 9
## ENSG00000125779 ENSG00000125779 17
## ENSG00000125812 ENSG00000125812 9
## ENSG00000125817 ENSG00000125817 8
## ENSG00000125821 ENSG00000125821 6
## ENSG00000125841 ENSG00000125841 1
## ENSG00000125845 ENSG00000125845 5
## ENSG00000125846 ENSG00000125846 1
## ENSG00000125863 ENSG00000125863 3
## ENSG00000125952 ENSG00000125952 25
## ENSG00000125968 ENSG00000125968 8
## ENSG00000126231 ENSG00000126231 19
## ENSG00000126353 ENSG00000126353 6
## ENSG00000126457 ENSG00000126457 1
## ENSG00000126581 ENSG00000126581 18
## ENSG00000126787 ENSG00000126787 19
## ENSG00000126858 ENSG00000126858 7
## ENSG00000126870 ENSG00000126870 1
## ENSG00000127124 ENSG00000127124 8
## ENSG00000128000 ENSG00000128000 2
## ENSG00000128059 ENSG00000128059 19
## ENSG00000128191 ENSG00000128191 22
## ENSG00000128245 ENSG00000128245 8
## ENSG00000128272 ENSG00000128272 23
## ENSG00000128274 ENSG00000128274 6
## ENSG00000128276 ENSG00000128276 32
## ENSG00000128342 ENSG00000128342 5
## ENSG00000128408 ENSG00000128408 1
## ENSG00000128581 ENSG00000128581 1
## ENSG00000128731 ENSG00000128731 13
## ENSG00000128872 ENSG00000128872 25
## ENSG00000128908 ENSG00000128908 21
## ENSG00000128923 ENSG00000128923 25
## ENSG00000129071 ENSG00000129071 17
## ENSG00000129351 ENSG00000129351 21
## ENSG00000129450 ENSG00000129450 18
## ENSG00000129484 ENSG00000129484 1
## ENSG00000129493 ENSG00000129493 25
## ENSG00000129657 ENSG00000129657 17
## ENSG00000129675 ENSG00000129675 25
## ENSG00000129691 ENSG00000129691 13
## ENSG00000129696 ENSG00000129696 28
## ENSG00000130147 ENSG00000130147 1
## ENSG00000130167 ENSG00000130167 17
## ENSG00000130202 ENSG00000130202 33
## ENSG00000130203 ENSG00000130203 6
## ENSG00000130204 ENSG00000130204 8
## ENSG00000130208 ENSG00000130208 6
## ENSG00000130255 ENSG00000130255 1
## ENSG00000130300 ENSG00000130300 3
## ENSG00000130338 ENSG00000130338 8
## ENSG00000130382 ENSG00000130382 7
## ENSG00000130414 ENSG00000130414 8
## ENSG00000130479 ENSG00000130479 9
## ENSG00000130517 ENSG00000130517 11
## ENSG00000130520 ENSG00000130520 8
## ENSG00000130559 ENSG00000130559 21
## ENSG00000130584 ENSG00000130584 6
## ENSG00000130638 ENSG00000130638 1
## ENSG00000130649 ENSG00000130649 19
## ENSG00000130653 ENSG00000130653 1
## ENSG00000130713 ENSG00000130713 1
## ENSG00000130725 ENSG00000130725 9
## ENSG00000130768 ENSG00000130768 4
## ENSG00000130997 ENSG00000130997 22
## ENSG00000131019 ENSG00000131019 1
## ENSG00000131042 ENSG00000131042 9
## ENSG00000131100 ENSG00000131100 5
## ENSG00000131143 ENSG00000131143 8
## ENSG00000131236 ENSG00000131236 17
## ENSG00000131238 ENSG00000131238 7
## ENSG00000131374 ENSG00000131374 23
## ENSG00000131389 ENSG00000131389 17
## ENSG00000131398 ENSG00000131398 8
## ENSG00000131446 ENSG00000131446 18
## ENSG00000131508 ENSG00000131508 27
## ENSG00000131711 ENSG00000131711 19
## ENSG00000131747 ENSG00000131747 19
## ENSG00000131828 ENSG00000131828 1
## ENSG00000131844 ENSG00000131844 1
## ENSG00000131845 ENSG00000131845 1
## ENSG00000131871 ENSG00000131871 1
## ENSG00000131873 ENSG00000131873 17
## ENSG00000131943 ENSG00000131943 6
## ENSG00000131944 ENSG00000131944 28
## ENSG00000132128 ENSG00000132128 1
## ENSG00000132199 ENSG00000132199 1
## ENSG00000132254 ENSG00000132254 1
## ENSG00000132256 ENSG00000132256 16
## ENSG00000132300 ENSG00000132300 1
## ENSG00000132305 ENSG00000132305 1
## ENSG00000132361 ENSG00000132361 8
## ENSG00000132382 ENSG00000132382 1
## ENSG00000132386 ENSG00000132386 1
## ENSG00000132470 ENSG00000132470 5
## ENSG00000132478 ENSG00000132478 10
## ENSG00000132530 ENSG00000132530 10
## ENSG00000132549 ENSG00000132549 17
## ENSG00000132718 ENSG00000132718 6
## ENSG00000132746 ENSG00000132746 19
## ENSG00000132792 ENSG00000132792 21
## ENSG00000132879 ENSG00000132879 1
## ENSG00000132952 ENSG00000132952 11
## ENSG00000132953 ENSG00000132953 1
## ENSG00000132965 ENSG00000132965 11
## ENSG00000132972 ENSG00000132972 28
## ENSG00000133056 ENSG00000133056 19
## ENSG00000133106 ENSG00000133106 10
## ENSG00000133119 ENSG00000133119 13
## ENSG00000133398 ENSG00000133398 21
## ENSG00000133422 ENSG00000133422 1
## ENSG00000133612 ENSG00000133612 8
## ENSG00000133627 ENSG00000133627 10
## ENSG00000133789 ENSG00000133789 13
## ENSG00000133805 ENSG00000133805 11
## ENSG00000133943 ENSG00000133943 17
## ENSG00000133997 ENSG00000133997 4
## ENSG00000134057 ENSG00000134057 19
## ENSG00000134070 ENSG00000134070 18
## ENSG00000134077 ENSG00000134077 13
## ENSG00000134086 ENSG00000134086 29
## ENSG00000134107 ENSG00000134107 11
## ENSG00000134146 ENSG00000134146 6
## ENSG00000134183 ENSG00000134183 10
## ENSG00000134186 ENSG00000134186 4
## ENSG00000134207 ENSG00000134207 1
## ENSG00000134222 ENSG00000134222 18
## ENSG00000134245 ENSG00000134245 1
## ENSG00000134318 ENSG00000134318 25
## ENSG00000134324 ENSG00000134324 13
## ENSG00000134333 ENSG00000134333 6
## ENSG00000134369 ENSG00000134369 1
## ENSG00000134440 ENSG00000134440 1
## ENSG00000134453 ENSG00000134453 21
## ENSG00000134533 ENSG00000134533 19
## ENSG00000134594 ENSG00000134594 13
## ENSG00000134684 ENSG00000134684 1
## ENSG00000134686 ENSG00000134686 9
## ENSG00000134697 ENSG00000134697 1
## ENSG00000134748 ENSG00000134748 28
## ENSG00000134759 ENSG00000134759 1
## ENSG00000134802 ENSG00000134802 8
## ENSG00000134809 ENSG00000134809 3
## ENSG00000134824 ENSG00000134824 22
## ENSG00000134874 ENSG00000134874 14
## ENSG00000134900 ENSG00000134900 23
## ENSG00000135018 ENSG00000135018 18
## ENSG00000135040 ENSG00000135040 13
## ENSG00000135047 ENSG00000135047 6
## ENSG00000135077 ENSG00000135077 8
## ENSG00000135083 ENSG00000135083 28
## ENSG00000135094 ENSG00000135094 8
## ENSG00000135111 ENSG00000135111 1
## ENSG00000135116 ENSG00000135116 13
## ENSG00000135205 ENSG00000135205 10
## ENSG00000135245 ENSG00000135245 19
## ENSG00000135314 ENSG00000135314 5
## ENSG00000135315 ENSG00000135315 26
## ENSG00000135316 ENSG00000135316 1
## ENSG00000135318 ENSG00000135318 2
## ENSG00000135362 ENSG00000135362 4
## ENSG00000135363 ENSG00000135363 9
## ENSG00000135372 ENSG00000135372 1
## ENSG00000135378 ENSG00000135378 12
## ENSG00000135424 ENSG00000135424 1
## ENSG00000135457 ENSG00000135457 1
## ENSG00000135473 ENSG00000135473 32
## ENSG00000135503 ENSG00000135503 23
## ENSG00000135622 ENSG00000135622 1
## ENSG00000135723 ENSG00000135723 9
## ENSG00000135823 ENSG00000135823 27
## ENSG00000135828 ENSG00000135828 16
## ENSG00000135912 ENSG00000135912 12
## ENSG00000135913 ENSG00000135913 13
## ENSG00000135916 ENSG00000135916 13
## ENSG00000135924 ENSG00000135924 22
## ENSG00000135929 ENSG00000135929 12
## ENSG00000136011 ENSG00000136011 3
## ENSG00000136045 ENSG00000136045 1
## ENSG00000136068 ENSG00000136068 13
## ENSG00000136104 ENSG00000136104 1
## ENSG00000136158 ENSG00000136158 22
## ENSG00000136235 ENSG00000136235 6
## ENSG00000136247 ENSG00000136247 1
## ENSG00000136379 ENSG00000136379 3
## ENSG00000136514 ENSG00000136514 3
## ENSG00000136521 ENSG00000136521 1
## ENSG00000136541 ENSG00000136541 11
## ENSG00000136603 ENSG00000136603 18
## ENSG00000136628 ENSG00000136628 1
## ENSG00000136715 ENSG00000136715 17
## ENSG00000136717 ENSG00000136717 8
## ENSG00000136732 ENSG00000136732 6
## ENSG00000136807 ENSG00000136807 11
## ENSG00000136811 ENSG00000136811 21
## ENSG00000136826 ENSG00000136826 12
## ENSG00000136827 ENSG00000136827 9
## ENSG00000136830 ENSG00000136830 8
## ENSG00000136840 ENSG00000136840 8
## ENSG00000136861 ENSG00000136861 4
## ENSG00000136874 ENSG00000136874 26
## ENSG00000136875 ENSG00000136875 5
## ENSG00000136925 ENSG00000136925 13
## ENSG00000136930 ENSG00000136930 23
## ENSG00000136932 ENSG00000136932 11
## ENSG00000136938 ENSG00000136938 30
## ENSG00000136942 ENSG00000136942 1
## ENSG00000137054 ENSG00000137054 1
## ENSG00000137074 ENSG00000137074 6
## ENSG00000137094 ENSG00000137094 6
## ENSG00000137166 ENSG00000137166 21
## ENSG00000137168 ENSG00000137168 1
## ENSG00000137309 ENSG00000137309 8
## ENSG00000137312 ENSG00000137312 17
## ENSG00000137331 ENSG00000137331 24
## ENSG00000137343 ENSG00000137343 32
## ENSG00000137509 ENSG00000137509 3
## ENSG00000137522 ENSG00000137522 13
## ENSG00000137547 ENSG00000137547 1
## ENSG00000137571 ENSG00000137571 27
## ENSG00000137628 ENSG00000137628 3
## ENSG00000137656 ENSG00000137656 4
## ENSG00000137672 ENSG00000137672 13
## ENSG00000137806 ENSG00000137806 2
## ENSG00000137807 ENSG00000137807 19
## ENSG00000137812 ENSG00000137812 1
## ENSG00000137824 ENSG00000137824 1
## ENSG00000137834 ENSG00000137834 8
## ENSG00000137871 ENSG00000137871 1
## ENSG00000137936 ENSG00000137936 13
## ENSG00000137959 ENSG00000137959 3
## ENSG00000137965 ENSG00000137965 7
## ENSG00000138031 ENSG00000138031 1
## ENSG00000138061 ENSG00000138061 20
## ENSG00000138074 ENSG00000138074 1
## ENSG00000138095 ENSG00000138095 1
## ENSG00000138131 ENSG00000138131 25
## ENSG00000138180 ENSG00000138180 19
## ENSG00000138246 ENSG00000138246 26
## ENSG00000138279 ENSG00000138279 18
## ENSG00000138303 ENSG00000138303 19
## ENSG00000138363 ENSG00000138363 1
## ENSG00000138375 ENSG00000138375 22
## ENSG00000138413 ENSG00000138413 6
## ENSG00000138442 ENSG00000138442 1
## ENSG00000138646 ENSG00000138646 10
## ENSG00000138658 ENSG00000138658 4
## ENSG00000138709 ENSG00000138709 1
## ENSG00000138738 ENSG00000138738 4
## ENSG00000138760 ENSG00000138760 1
## ENSG00000138768 ENSG00000138768 2
## ENSG00000138778 ENSG00000138778 19
## ENSG00000138795 ENSG00000138795 6
## ENSG00000138796 ENSG00000138796 1
## ENSG00000139112 ENSG00000139112 17
## ENSG00000139160 ENSG00000139160 16
## ENSG00000139190 ENSG00000139190 10
## ENSG00000139211 ENSG00000139211 6
## ENSG00000139437 ENSG00000139437 32
## ENSG00000139514 ENSG00000139514 1
## ENSG00000139579 ENSG00000139579 1
## ENSG00000139597 ENSG00000139597 33
## ENSG00000139631 ENSG00000139631 17
## ENSG00000139684 ENSG00000139684 1
## ENSG00000139722 ENSG00000139722 9
## ENSG00000139726 ENSG00000139726 2
## ENSG00000139734 ENSG00000139734 19
## ENSG00000139842 ENSG00000139842 21
## ENSG00000139970 ENSG00000139970 20
## ENSG00000140044 ENSG00000140044 11
## ENSG00000140090 ENSG00000140090 12
## ENSG00000140350 ENSG00000140350 17
## ENSG00000140374 ENSG00000140374 1
## ENSG00000140400 ENSG00000140400 21
## ENSG00000140403 ENSG00000140403 32
## ENSG00000140455 ENSG00000140455 12
## ENSG00000140525 ENSG00000140525 19
## ENSG00000140526 ENSG00000140526 11
## ENSG00000140564 ENSG00000140564 11
## ENSG00000140577 ENSG00000140577 21
## ENSG00000140650 ENSG00000140650 33
## ENSG00000140743 ENSG00000140743 1
## ENSG00000140859 ENSG00000140859 5
## ENSG00000140968 ENSG00000140968 8
## ENSG00000141219 ENSG00000141219 5
## ENSG00000141258 ENSG00000141258 23
## ENSG00000141384 ENSG00000141384 1
## ENSG00000141456 ENSG00000141456 1
## ENSG00000141458 ENSG00000141458 6
## ENSG00000141540 ENSG00000141540 8
## ENSG00000141574 ENSG00000141574 12
## ENSG00000141576 ENSG00000141576 30
## ENSG00000141655 ENSG00000141655 3
## ENSG00000141664 ENSG00000141664 17
## ENSG00000141837 ENSG00000141837 16
## ENSG00000141858 ENSG00000141858 30
## ENSG00000141905 ENSG00000141905 12
## ENSG00000142188 ENSG00000142188 32
## ENSG00000142528 ENSG00000142528 12
## ENSG00000142621 ENSG00000142621 8
## ENSG00000142627 ENSG00000142627 1
## ENSG00000142655 ENSG00000142655 21
## ENSG00000142687 ENSG00000142687 25
## ENSG00000142794 ENSG00000142794 22
## ENSG00000142910 ENSG00000142910 1
## ENSG00000142920 ENSG00000142920 5
## ENSG00000143013 ENSG00000143013 1
## ENSG00000143033 ENSG00000143033 13
## ENSG00000143079 ENSG00000143079 6
## ENSG00000143127 ENSG00000143127 1
## ENSG00000143178 ENSG00000143178 10
## ENSG00000143321 ENSG00000143321 8
## ENSG00000143333 ENSG00000143333 19
## ENSG00000143376 ENSG00000143376 12
## ENSG00000143416 ENSG00000143416 2
## ENSG00000143420 ENSG00000143420 28
## ENSG00000143437 ENSG00000143437 25
## ENSG00000143457 ENSG00000143457 16
## ENSG00000143458 ENSG00000143458 22
## ENSG00000143476 ENSG00000143476 1
## ENSG00000143486 ENSG00000143486 27
## ENSG00000143612 ENSG00000143612 6
## ENSG00000143622 ENSG00000143622 9
## ENSG00000143624 ENSG00000143624 10
## ENSG00000143643 ENSG00000143643 32
## ENSG00000143669 ENSG00000143669 17
## ENSG00000143740 ENSG00000143740 1
## ENSG00000143761 ENSG00000143761 9
## ENSG00000143786 ENSG00000143786 16
## ENSG00000143851 ENSG00000143851 15
## ENSG00000143862 ENSG00000143862 11
## ENSG00000143889 ENSG00000143889 28
## ENSG00000143924 ENSG00000143924 4
## ENSG00000144115 ENSG00000144115 2
## ENSG00000144134 ENSG00000144134 1
## ENSG00000144331 ENSG00000144331 2
## ENSG00000144354 ENSG00000144354 1
## ENSG00000144445 ENSG00000144445 10
## ENSG00000144504 ENSG00000144504 23
## ENSG00000144559 ENSG00000144559 1
## ENSG00000144580 ENSG00000144580 1
## ENSG00000144647 ENSG00000144647 8
## ENSG00000144659 ENSG00000144659 13
## ENSG00000144681 ENSG00000144681 13
## ENSG00000144741 ENSG00000144741 8
## ENSG00000144746 ENSG00000144746 6
## ENSG00000144802 ENSG00000144802 7
## ENSG00000144815 ENSG00000144815 21
## ENSG00000145014 ENSG00000145014 22
## ENSG00000145040 ENSG00000145040 6
## ENSG00000145041 ENSG00000145041 30
## ENSG00000145103 ENSG00000145103 1
## ENSG00000145191 ENSG00000145191 1
## ENSG00000145244 ENSG00000145244 3
## ENSG00000145246 ENSG00000145246 6
## ENSG00000145247 ENSG00000145247 19
## ENSG00000145332 ENSG00000145332 12
## ENSG00000145348 ENSG00000145348 32
## ENSG00000145362 ENSG00000145362 3
## ENSG00000145375 ENSG00000145375 1
## ENSG00000145416 ENSG00000145416 21
## ENSG00000145439 ENSG00000145439 19
## ENSG00000145685 ENSG00000145685 8
## ENSG00000145730 ENSG00000145730 6
## ENSG00000145779 ENSG00000145779 19
## ENSG00000145911 ENSG00000145911 5
## ENSG00000146021 ENSG00000146021 13
## ENSG00000146192 ENSG00000146192 21
## ENSG00000146205 ENSG00000146205 25
## ENSG00000146243 ENSG00000146243 2
## ENSG00000146281 ENSG00000146281 16
## ENSG00000146416 ENSG00000146416 16
## ENSG00000146463 ENSG00000146463 1
## ENSG00000146476 ENSG00000146476 2
## ENSG00000146701 ENSG00000146701 8
## ENSG00000146733 ENSG00000146733 1
## ENSG00000146909 ENSG00000146909 8
## ENSG00000146918 ENSG00000146918 1
## ENSG00000146950 ENSG00000146950 19
## ENSG00000147010 ENSG00000147010 9
## ENSG00000147138 ENSG00000147138 1
## ENSG00000147168 ENSG00000147168 10
## ENSG00000147174 ENSG00000147174 16
## ENSG00000147257 ENSG00000147257 1
## ENSG00000147324 ENSG00000147324 1
## ENSG00000147383 ENSG00000147383 1
## ENSG00000147408 ENSG00000147408 16
## ENSG00000147454 ENSG00000147454 9
## ENSG00000147471 ENSG00000147471 1
## ENSG00000147548 ENSG00000147548 25
## ENSG00000147592 ENSG00000147592 1
## ENSG00000147614 ENSG00000147614 2
## ENSG00000147647 ENSG00000147647 1
## ENSG00000147677 ENSG00000147677 8
## ENSG00000147684 ENSG00000147684 1
## ENSG00000147905 ENSG00000147905 16
## ENSG00000148187 ENSG00000148187 1
## ENSG00000148200 ENSG00000148200 17
## ENSG00000148219 ENSG00000148219 14
## ENSG00000148225 ENSG00000148225 2
## ENSG00000148248 ENSG00000148248 30
## ENSG00000148296 ENSG00000148296 15
## ENSG00000148334 ENSG00000148334 8
## ENSG00000148335 ENSG00000148335 21
## ENSG00000148344 ENSG00000148344 5
## ENSG00000148396 ENSG00000148396 11
## ENSG00000148450 ENSG00000148450 12
## ENSG00000148513 ENSG00000148513 26
## ENSG00000148606 ENSG00000148606 1
## ENSG00000148690 ENSG00000148690 1
## ENSG00000148719 ENSG00000148719 9
## ENSG00000148737 ENSG00000148737 12
## ENSG00000148814 ENSG00000148814 1
## ENSG00000148834 ENSG00000148834 8
## ENSG00000148840 ENSG00000148840 8
## ENSG00000148843 ENSG00000148843 1
## ENSG00000149115 ENSG00000149115 1
## ENSG00000149292 ENSG00000149292 19
## ENSG00000149311 ENSG00000149311 25
## ENSG00000149346 ENSG00000149346 10
## ENSG00000149418 ENSG00000149418 30
## ENSG00000149633 ENSG00000149633 19
## ENSG00000149639 ENSG00000149639 8
## ENSG00000149679 ENSG00000149679 9
## ENSG00000149716 ENSG00000149716 4
## ENSG00000149972 ENSG00000149972 16
## ENSG00000150048 ENSG00000150048 12
## ENSG00000150347 ENSG00000150347 6
## ENSG00000150556 ENSG00000150556 5
## ENSG00000150630 ENSG00000150630 19
## ENSG00000150768 ENSG00000150768 1
## ENSG00000150867 ENSG00000150867 11
## ENSG00000150967 ENSG00000150967 6
## ENSG00000150990 ENSG00000150990 8
## ENSG00000151148 ENSG00000151148 10
## ENSG00000151150 ENSG00000151150 19
## ENSG00000151208 ENSG00000151208 2
## ENSG00000151229 ENSG00000151229 11
## ENSG00000151292 ENSG00000151292 3
## ENSG00000151320 ENSG00000151320 14
## ENSG00000151413 ENSG00000151413 1
## ENSG00000151466 ENSG00000151466 17
## ENSG00000151490 ENSG00000151490 20
## ENSG00000151503 ENSG00000151503 1
## ENSG00000151532 ENSG00000151532 17
## ENSG00000151576 ENSG00000151576 12
## ENSG00000151689 ENSG00000151689 13
## ENSG00000151692 ENSG00000151692 4
## ENSG00000151693 ENSG00000151693 1
## ENSG00000151702 ENSG00000151702 17
## ENSG00000151726 ENSG00000151726 12
## ENSG00000151778 ENSG00000151778 19
## ENSG00000151789 ENSG00000151789 3
## ENSG00000151790 ENSG00000151790 5
## ENSG00000151835 ENSG00000151835 1
## ENSG00000152056 ENSG00000152056 3
## ENSG00000152104 ENSG00000152104 5
## ENSG00000152137 ENSG00000152137 14
## ENSG00000152147 ENSG00000152147 6
## ENSG00000152253 ENSG00000152253 19
## ENSG00000152443 ENSG00000152443 4
## ENSG00000152465 ENSG00000152465 22
## ENSG00000152492 ENSG00000152492 1
## ENSG00000152503 ENSG00000152503 21
## ENSG00000152672 ENSG00000152672 20
## ENSG00000152767 ENSG00000152767 3
## ENSG00000152804 ENSG00000152804 23
## ENSG00000152952 ENSG00000152952 19
## ENSG00000153044 ENSG00000153044 1
## ENSG00000153066 ENSG00000153066 29
## ENSG00000153086 ENSG00000153086 16
## ENSG00000153157 ENSG00000153157 13
## ENSG00000153395 ENSG00000153395 9
## ENSG00000153563 ENSG00000153563 6
## ENSG00000153823 ENSG00000153823 8
## ENSG00000153976 ENSG00000153976 5
## ENSG00000153982 ENSG00000153982 19
## ENSG00000154122 ENSG00000154122 2
## ENSG00000154153 ENSG00000154153 5
## ENSG00000154240 ENSG00000154240 5
## ENSG00000154305 ENSG00000154305 10
## ENSG00000154309 ENSG00000154309 2
## ENSG00000154310 ENSG00000154310 13
## ENSG00000154330 ENSG00000154330 3
## ENSG00000154447 ENSG00000154447 20
## ENSG00000154451 ENSG00000154451 12
## ENSG00000154589 ENSG00000154589 12
## ENSG00000154620 ENSG00000154620 30
## ENSG00000154723 ENSG00000154723 1
## ENSG00000154760 ENSG00000154760 13
## ENSG00000154781 ENSG00000154781 17
## ENSG00000154814 ENSG00000154814 19
## ENSG00000154822 ENSG00000154822 25
## ENSG00000155016 ENSG00000155016 1
## ENSG00000155026 ENSG00000155026 10
## ENSG00000155090 ENSG00000155090 29
## ENSG00000155093 ENSG00000155093 11
## ENSG00000155158 ENSG00000155158 2
## ENSG00000155189 ENSG00000155189 1
## ENSG00000155252 ENSG00000155252 8
## ENSG00000155275 ENSG00000155275 21
## ENSG00000155363 ENSG00000155363 12
## ENSG00000155380 ENSG00000155380 6
## ENSG00000155438 ENSG00000155438 1
## ENSG00000155463 ENSG00000155463 8
## ENSG00000155592 ENSG00000155592 21
## ENSG00000155760 ENSG00000155760 22
## ENSG00000155893 ENSG00000155893 25
## ENSG00000155906 ENSG00000155906 22
## ENSG00000156030 ENSG00000156030 9
## ENSG00000156042 ENSG00000156042 10
## ENSG00000156049 ENSG00000156049 22
## ENSG00000156239 ENSG00000156239 1
## ENSG00000156345 ENSG00000156345 1
## ENSG00000156398 ENSG00000156398 6
## ENSG00000156471 ENSG00000156471 30
## ENSG00000156500 ENSG00000156500 25
## ENSG00000156502 ENSG00000156502 1
## ENSG00000156711 ENSG00000156711 10
## ENSG00000156795 ENSG00000156795 1
## ENSG00000156802 ENSG00000156802 13
## ENSG00000156804 ENSG00000156804 1
## ENSG00000156958 ENSG00000156958 22
## ENSG00000156970 ENSG00000156970 19
## ENSG00000157036 ENSG00000157036 1
## ENSG00000157107 ENSG00000157107 10
## ENSG00000157110 ENSG00000157110 2
## ENSG00000157227 ENSG00000157227 6
## ENSG00000157456 ENSG00000157456 1
## ENSG00000157540 ENSG00000157540 17
## ENSG00000157542 ENSG00000157542 16
## ENSG00000157617 ENSG00000157617 6
## ENSG00000157654 ENSG00000157654 1
## ENSG00000157657 ENSG00000157657 22
## ENSG00000157881 ENSG00000157881 17
## ENSG00000157890 ENSG00000157890 10
## ENSG00000157933 ENSG00000157933 11
## ENSG00000157985 ENSG00000157985 14
## ENSG00000158006 ENSG00000158006 13
## ENSG00000158062 ENSG00000158062 8
## ENSG00000158292 ENSG00000158292 13
## ENSG00000158321 ENSG00000158321 6
## ENSG00000158373 ENSG00000158373 16
## ENSG00000158406 ENSG00000158406 16
## ENSG00000158417 ENSG00000158417 1
## ENSG00000158691 ENSG00000158691 13
## ENSG00000158710 ENSG00000158710 17
## ENSG00000158715 ENSG00000158715 21
## ENSG00000158815 ENSG00000158815 25
## ENSG00000159023 ENSG00000159023 17
## ENSG00000159199 ENSG00000159199 1
## ENSG00000159216 ENSG00000159216 21
## ENSG00000159261 ENSG00000159261 5
## ENSG00000159307 ENSG00000159307 13
## ENSG00000159335 ENSG00000159335 1
## ENSG00000159346 ENSG00000159346 17
## ENSG00000159348 ENSG00000159348 6
## ENSG00000159363 ENSG00000159363 8
## ENSG00000159423 ENSG00000159423 8
## ENSG00000159445 ENSG00000159445 1
## ENSG00000159479 ENSG00000159479 5
## ENSG00000159733 ENSG00000159733 1
## ENSG00000159784 ENSG00000159784 31
## ENSG00000159905 ENSG00000159905 2
## ENSG00000160097 ENSG00000160097 2
## ENSG00000160113 ENSG00000160113 1
## ENSG00000160124 ENSG00000160124 3
## ENSG00000160191 ENSG00000160191 16
## ENSG00000160194 ENSG00000160194 1
## ENSG00000160201 ENSG00000160201 10
## ENSG00000160214 ENSG00000160214 8
## ENSG00000160271 ENSG00000160271 30
## ENSG00000160299 ENSG00000160299 21
## ENSG00000160307 ENSG00000160307 1
## ENSG00000160679 ENSG00000160679 17
## ENSG00000160753 ENSG00000160753 32
## ENSG00000160785 ENSG00000160785 17
## ENSG00000160789 ENSG00000160789 1
## ENSG00000160791 ENSG00000160791 6
## ENSG00000160799 ENSG00000160799 30
## ENSG00000160803 ENSG00000160803 1
## ENSG00000160856 ENSG00000160856 3
## ENSG00000160867 ENSG00000160867 16
## ENSG00000160932 ENSG00000160932 7
## ENSG00000161638 ENSG00000161638 18
## ENSG00000161640 ENSG00000161640 29
## ENSG00000161653 ENSG00000161653 6
## ENSG00000161791 ENSG00000161791 21
## ENSG00000161888 ENSG00000161888 19
## ENSG00000161960 ENSG00000161960 1
## ENSG00000162063 ENSG00000162063 19
## ENSG00000162104 ENSG00000162104 8
## ENSG00000162129 ENSG00000162129 8
## ENSG00000162139 ENSG00000162139 8
## ENSG00000162267 ENSG00000162267 21
## ENSG00000162377 ENSG00000162377 6
## ENSG00000162385 ENSG00000162385 27
## ENSG00000162390 ENSG00000162390 13
## ENSG00000162408 ENSG00000162408 21
## ENSG00000162419 ENSG00000162419 9
## ENSG00000162433 ENSG00000162433 6
## ENSG00000162511 ENSG00000162511 9
## ENSG00000162639 ENSG00000162639 13
## ENSG00000162669 ENSG00000162669 27
## ENSG00000162694 ENSG00000162694 1
## ENSG00000162722 ENSG00000162722 21
## ENSG00000162729 ENSG00000162729 1
## ENSG00000162739 ENSG00000162739 19
## ENSG00000162757 ENSG00000162757 5
## ENSG00000162869 ENSG00000162869 10
## ENSG00000162877 ENSG00000162877 2
## ENSG00000162909 ENSG00000162909 8
## ENSG00000162928 ENSG00000162928 1
## ENSG00000162929 ENSG00000162929 25
## ENSG00000162944 ENSG00000162944 2
## ENSG00000163029 ENSG00000163029 19
## ENSG00000163191 ENSG00000163191 18
## ENSG00000163251 ENSG00000163251 6
## ENSG00000163297 ENSG00000163297 10
## ENSG00000163328 ENSG00000163328 12
## ENSG00000163362 ENSG00000163362 19
## ENSG00000163399 ENSG00000163399 8
## ENSG00000163406 ENSG00000163406 25
## ENSG00000163466 ENSG00000163466 17
## ENSG00000163482 ENSG00000163482 32
## ENSG00000163513 ENSG00000163513 4
## ENSG00000163521 ENSG00000163521 8
## ENSG00000163528 ENSG00000163528 6
## ENSG00000163536 ENSG00000163536 19
## ENSG00000163563 ENSG00000163563 24
## ENSG00000163644 ENSG00000163644 22
## ENSG00000163666 ENSG00000163666 6
## ENSG00000163683 ENSG00000163683 3
## ENSG00000163719 ENSG00000163719 9
## ENSG00000163746 ENSG00000163746 16
## ENSG00000163755 ENSG00000163755 20
## ENSG00000163798 ENSG00000163798 6
## ENSG00000163866 ENSG00000163866 13
## ENSG00000163872 ENSG00000163872 1
## ENSG00000163950 ENSG00000163950 28
## ENSG00000163995 ENSG00000163995 5
## ENSG00000164048 ENSG00000164048 1
## ENSG00000164056 ENSG00000164056 1
## ENSG00000164091 ENSG00000164091 11
## ENSG00000164104 ENSG00000164104 13
## ENSG00000164105 ENSG00000164105 8
## ENSG00000164109 ENSG00000164109 19
## ENSG00000164111 ENSG00000164111 8
## ENSG00000164116 ENSG00000164116 1
## ENSG00000164136 ENSG00000164136 20
## ENSG00000164182 ENSG00000164182 6
## ENSG00000164187 ENSG00000164187 2
## ENSG00000164291 ENSG00000164291 19
## ENSG00000164292 ENSG00000164292 25
## ENSG00000164296 ENSG00000164296 1
## ENSG00000164379 ENSG00000164379 5
## ENSG00000164403 ENSG00000164403 8
## ENSG00000164406 ENSG00000164406 1
## ENSG00000164414 ENSG00000164414 1
## ENSG00000164442 ENSG00000164442 23
## ENSG00000164543 ENSG00000164543 4
## ENSG00000164649 ENSG00000164649 13
## ENSG00000164741 ENSG00000164741 6
## ENSG00000164754 ENSG00000164754 17
## ENSG00000164818 ENSG00000164818 1
## ENSG00000164828 ENSG00000164828 1
## ENSG00000164867 ENSG00000164867 1
## ENSG00000164975 ENSG00000164975 1
## ENSG00000164985 ENSG00000164985 10
## ENSG00000165055 ENSG00000165055 1
## ENSG00000165097 ENSG00000165097 10
## ENSG00000165102 ENSG00000165102 21
## ENSG00000165138 ENSG00000165138 1
## ENSG00000165181 ENSG00000165181 16
## ENSG00000165185 ENSG00000165185 7
## ENSG00000165259 ENSG00000165259 8
## ENSG00000165280 ENSG00000165280 18
## ENSG00000165283 ENSG00000165283 1
## ENSG00000165304 ENSG00000165304 19
## ENSG00000165406 ENSG00000165406 17
## ENSG00000165449 ENSG00000165449 19
## ENSG00000165527 ENSG00000165527 29
## ENSG00000165568 ENSG00000165568 13
## ENSG00000165661 ENSG00000165661 23
## ENSG00000165685 ENSG00000165685 8
## ENSG00000165733 ENSG00000165733 1
## ENSG00000165804 ENSG00000165804 14
## ENSG00000165895 ENSG00000165895 19
## ENSG00000165898 ENSG00000165898 6
## ENSG00000165916 ENSG00000165916 1
## ENSG00000165934 ENSG00000165934 6
## ENSG00000165943 ENSG00000165943 11
## ENSG00000165949 ENSG00000165949 6
## ENSG00000165966 ENSG00000165966 14
## ENSG00000166016 ENSG00000166016 25
## ENSG00000166123 ENSG00000166123 1
## ENSG00000166140 ENSG00000166140 32
## ENSG00000166164 ENSG00000166164 33
## ENSG00000166197 ENSG00000166197 1
## ENSG00000166199 ENSG00000166199 1
## ENSG00000166224 ENSG00000166224 1
## ENSG00000166257 ENSG00000166257 2
## ENSG00000166289 ENSG00000166289 1
## ENSG00000166343 ENSG00000166343 25
## ENSG00000166398 ENSG00000166398 3
## ENSG00000166432 ENSG00000166432 25
## ENSG00000166478 ENSG00000166478 17
## ENSG00000166484 ENSG00000166484 29
## ENSG00000166503 ENSG00000166503 1
## ENSG00000166508 ENSG00000166508 4
## ENSG00000166526 ENSG00000166526 15
## ENSG00000166527 ENSG00000166527 12
## ENSG00000166529 ENSG00000166529 13
## ENSG00000166592 ENSG00000166592 8
## ENSG00000166750 ENSG00000166750 2
## ENSG00000166788 ENSG00000166788 1
## ENSG00000166801 ENSG00000166801 3
## ENSG00000166816 ENSG00000166816 21
## ENSG00000166881 ENSG00000166881 19
## ENSG00000166949 ENSG00000166949 21
## ENSG00000167014 ENSG00000167014 25
## ENSG00000167077 ENSG00000167077 13
## ENSG00000167083 ENSG00000167083 31
## ENSG00000167193 ENSG00000167193 27
## ENSG00000167291 ENSG00000167291 6
## ENSG00000167528 ENSG00000167528 25
## ENSG00000167543 ENSG00000167543 21
## ENSG00000167562 ENSG00000167562 10
## ENSG00000167565 ENSG00000167565 11
## ENSG00000167566 ENSG00000167566 18
## ENSG00000167595 ENSG00000167595 17
## ENSG00000167634 ENSG00000167634 2
## ENSG00000167680 ENSG00000167680 31
## ENSG00000167699 ENSG00000167699 1
## ENSG00000167703 ENSG00000167703 9
## ENSG00000167720 ENSG00000167720 1
## ENSG00000167721 ENSG00000167721 1
## ENSG00000167769 ENSG00000167769 5
## ENSG00000167772 ENSG00000167772 6
## ENSG00000167925 ENSG00000167925 29
## ENSG00000167977 ENSG00000167977 8
## ENSG00000167994 ENSG00000167994 6
## ENSG00000167995 ENSG00000167995 24
## ENSG00000168002 ENSG00000168002 30
## ENSG00000168005 ENSG00000168005 13
## ENSG00000168016 ENSG00000168016 10
## ENSG00000168040 ENSG00000168040 6
## ENSG00000168209 ENSG00000168209 11
## ENSG00000168256 ENSG00000168256 20
## ENSG00000168259 ENSG00000168259 1
## ENSG00000168264 ENSG00000168264 29
## ENSG00000168268 ENSG00000168268 1
## ENSG00000168273 ENSG00000168273 1
## ENSG00000168303 ENSG00000168303 6
## ENSG00000168389 ENSG00000168389 1
## ENSG00000168439 ENSG00000168439 6
## ENSG00000168542 ENSG00000168542 3
## ENSG00000168569 ENSG00000168569 1
## ENSG00000168589 ENSG00000168589 5
## ENSG00000168672 ENSG00000168672 22
## ENSG00000168679 ENSG00000168679 22
## ENSG00000168701 ENSG00000168701 6
## ENSG00000168792 ENSG00000168792 30
## ENSG00000168795 ENSG00000168795 1
## ENSG00000168883 ENSG00000168883 11
## ENSG00000168904 ENSG00000168904 13
## ENSG00000168924 ENSG00000168924 1
## ENSG00000168944 ENSG00000168944 13
## ENSG00000169020 ENSG00000169020 1
## ENSG00000169047 ENSG00000169047 1
## ENSG00000169122 ENSG00000169122 13
## ENSG00000169231 ENSG00000169231 10
## ENSG00000169239 ENSG00000169239 29
## ENSG00000169375 ENSG00000169375 4
## ENSG00000169402 ENSG00000169402 10
## ENSG00000169432 ENSG00000169432 3
## ENSG00000169499 ENSG00000169499 25
## ENSG00000169583 ENSG00000169583 14
## ENSG00000169607 ENSG00000169607 19
## ENSG00000169621 ENSG00000169621 22
## ENSG00000169641 ENSG00000169641 1
## ENSG00000169696 ENSG00000169696 21
## ENSG00000169750 ENSG00000169750 1
## ENSG00000169813 ENSG00000169813 5
## ENSG00000169860 ENSG00000169860 1
## ENSG00000169871 ENSG00000169871 16
## ENSG00000169908 ENSG00000169908 19
## ENSG00000169919 ENSG00000169919 21
## ENSG00000169926 ENSG00000169926 11
## ENSG00000170011 ENSG00000170011 10
## ENSG00000170027 ENSG00000170027 6
## ENSG00000170035 ENSG00000170035 23
## ENSG00000170037 ENSG00000170037 21
## ENSG00000170044 ENSG00000170044 19
## ENSG00000170085 ENSG00000170085 21
## ENSG00000170113 ENSG00000170113 1
## ENSG00000170175 ENSG00000170175 2
## ENSG00000170190 ENSG00000170190 9
## ENSG00000170214 ENSG00000170214 31
## ENSG00000170248 ENSG00000170248 33
## ENSG00000170298 ENSG00000170298 15
## ENSG00000170312 ENSG00000170312 19
## ENSG00000170322 ENSG00000170322 11
## ENSG00000170348 ENSG00000170348 1
## ENSG00000170381 ENSG00000170381 5
## ENSG00000170464 ENSG00000170464 1
## ENSG00000170473 ENSG00000170473 1
## ENSG00000170500 ENSG00000170500 11
## ENSG00000170502 ENSG00000170502 1
## ENSG00000170542 ENSG00000170542 18
## ENSG00000170581 ENSG00000170581 7
## ENSG00000170632 ENSG00000170632 1
## ENSG00000170634 ENSG00000170634 4
## ENSG00000170653 ENSG00000170653 33
## ENSG00000170677 ENSG00000170677 1
## ENSG00000170776 ENSG00000170776 25
## ENSG00000170779 ENSG00000170779 30
## ENSG00000170906 ENSG00000170906 1
## ENSG00000171051 ENSG00000171051 24
## ENSG00000171100 ENSG00000171100 25
## ENSG00000171208 ENSG00000171208 8
## ENSG00000171262 ENSG00000171262 1
## ENSG00000171307 ENSG00000171307 1
## ENSG00000171365 ENSG00000171365 20
## ENSG00000171448 ENSG00000171448 28
## ENSG00000171453 ENSG00000171453 1
## ENSG00000171530 ENSG00000171530 31
## ENSG00000171566 ENSG00000171566 6
## ENSG00000171612 ENSG00000171612 21
## ENSG00000171617 ENSG00000171617 21
## ENSG00000171729 ENSG00000171729 8
## ENSG00000171735 ENSG00000171735 30
## ENSG00000171811 ENSG00000171811 5
## ENSG00000171843 ENSG00000171843 1
## ENSG00000171847 ENSG00000171847 20
## ENSG00000171867 ENSG00000171867 8
## ENSG00000171877 ENSG00000171877 5
## ENSG00000171940 ENSG00000171940 28
## ENSG00000171943 ENSG00000171943 12
## ENSG00000171960 ENSG00000171960 1
## ENSG00000171962 ENSG00000171962 8
## ENSG00000171984 ENSG00000171984 13
## ENSG00000172123 ENSG00000172123 25
## ENSG00000172159 ENSG00000172159 12
## ENSG00000172216 ENSG00000172216 9
## ENSG00000172247 ENSG00000172247 22
## ENSG00000172273 ENSG00000172273 19
## ENSG00000172331 ENSG00000172331 27
## ENSG00000172345 ENSG00000172345 25
## ENSG00000172403 ENSG00000172403 2
## ENSG00000172428 ENSG00000172428 1
## ENSG00000172493 ENSG00000172493 10
## ENSG00000172534 ENSG00000172534 21
## ENSG00000172543 ENSG00000172543 14
## ENSG00000172578 ENSG00000172578 4
## ENSG00000172586 ENSG00000172586 6
## ENSG00000172590 ENSG00000172590 1
## ENSG00000172594 ENSG00000172594 1
## ENSG00000172716 ENSG00000172716 1
## ENSG00000172748 ENSG00000172748 2
## ENSG00000172757 ENSG00000172757 10
## ENSG00000172794 ENSG00000172794 25
## ENSG00000172809 ENSG00000172809 1
## ENSG00000172888 ENSG00000172888 22
## ENSG00000172893 ENSG00000172893 1
## ENSG00000172927 ENSG00000172927 28
## ENSG00000173083 ENSG00000173083 18
## ENSG00000173124 ENSG00000173124 2
## ENSG00000173153 ENSG00000173153 11
## ENSG00000173156 ENSG00000173156 6
## ENSG00000173166 ENSG00000173166 8
## ENSG00000173175 ENSG00000173175 19
## ENSG00000173198 ENSG00000173198 25
## ENSG00000173214 ENSG00000173214 22
## ENSG00000173227 ENSG00000173227 5
## ENSG00000173262 ENSG00000173262 27
## ENSG00000173391 ENSG00000173391 1
## ENSG00000173457 ENSG00000173457 1
## ENSG00000173511 ENSG00000173511 1
## ENSG00000173530 ENSG00000173530 8
## ENSG00000173545 ENSG00000173545 24
## ENSG00000173546 ENSG00000173546 1
## ENSG00000173548 ENSG00000173548 1
## ENSG00000173575 ENSG00000173575 17
## ENSG00000173801 ENSG00000173801 1
## ENSG00000173818 ENSG00000173818 21
## ENSG00000173846 ENSG00000173846 9
## ENSG00000173917 ENSG00000173917 6
## ENSG00000173950 ENSG00000173950 30
## ENSG00000174177 ENSG00000174177 21
## ENSG00000174197 ENSG00000174197 13
## ENSG00000174231 ENSG00000174231 11
## ENSG00000174236 ENSG00000174236 1
## ENSG00000174371 ENSG00000174371 1
## ENSG00000174437 ENSG00000174437 8
## ENSG00000174442 ENSG00000174442 1
## ENSG00000174456 ENSG00000174456 10
## ENSG00000174482 ENSG00000174482 27
## ENSG00000174705 ENSG00000174705 6
## ENSG00000174827 ENSG00000174827 1
## ENSG00000174989 ENSG00000174989 32
## ENSG00000175130 ENSG00000175130 11
## ENSG00000175164 ENSG00000175164 21
## ENSG00000175183 ENSG00000175183 2
## ENSG00000175265 ENSG00000175265 1
## ENSG00000175414 ENSG00000175414 1
## ENSG00000175445 ENSG00000175445 1
## ENSG00000175513 ENSG00000175513 23
## ENSG00000175544 ENSG00000175544 1
## ENSG00000175591 ENSG00000175591 23
## ENSG00000175691 ENSG00000175691 1
## ENSG00000175899 ENSG00000175899 6
## ENSG00000176014 ENSG00000176014 1
## ENSG00000176105 ENSG00000176105 19
## ENSG00000176125 ENSG00000176125 2
## ENSG00000176390 ENSG00000176390 17
## ENSG00000176490 ENSG00000176490 22
## ENSG00000176531 ENSG00000176531 1
## ENSG00000176619 ENSG00000176619 1
## ENSG00000176641 ENSG00000176641 3
## ENSG00000176834 ENSG00000176834 22
## ENSG00000176973 ENSG00000176973 18
## ENSG00000177076 ENSG00000177076 1
## ENSG00000177119 ENSG00000177119 8
## ENSG00000177138 ENSG00000177138 16
## ENSG00000177189 ENSG00000177189 4
## ENSG00000177192 ENSG00000177192 8
## ENSG00000177272 ENSG00000177272 8
## ENSG00000177294 ENSG00000177294 10
## ENSG00000177311 ENSG00000177311 1
## ENSG00000177374 ENSG00000177374 23
## ENSG00000177409 ENSG00000177409 26
## ENSG00000177426 ENSG00000177426 8
## ENSG00000177469 ENSG00000177469 1
## ENSG00000177479 ENSG00000177479 29
## ENSG00000177700 ENSG00000177700 1
## ENSG00000177917 ENSG00000177917 25
## ENSG00000177932 ENSG00000177932 1
## ENSG00000177989 ENSG00000177989 7
## ENSG00000178104 ENSG00000178104 2
## ENSG00000178105 ENSG00000178105 1
## ENSG00000178199 ENSG00000178199 1
## ENSG00000178209 ENSG00000178209 29
## ENSG00000178338 ENSG00000178338 1
## ENSG00000178409 ENSG00000178409 1
## ENSG00000178573 ENSG00000178573 6
## ENSG00000178685 ENSG00000178685 10
## ENSG00000178700 ENSG00000178700 3
## ENSG00000178741 ENSG00000178741 8
## ENSG00000178852 ENSG00000178852 22
## ENSG00000178882 ENSG00000178882 6
## ENSG00000178896 ENSG00000178896 27
## ENSG00000178904 ENSG00000178904 4
## ENSG00000178921 ENSG00000178921 20
## ENSG00000178951 ENSG00000178951 29
## ENSG00000178966 ENSG00000178966 2
## ENSG00000178982 ENSG00000178982 8
## ENSG00000178988 ENSG00000178988 19
## ENSG00000178996 ENSG00000178996 24
## ENSG00000179044 ENSG00000179044 12
## ENSG00000179051 ENSG00000179051 21
## ENSG00000179091 ENSG00000179091 8
## ENSG00000179240 ENSG00000179240 19
## ENSG00000179262 ENSG00000179262 21
## ENSG00000179271 ENSG00000179271 1
## ENSG00000179348 ENSG00000179348 1
## ENSG00000179388 ENSG00000179388 16
## ENSG00000179409 ENSG00000179409 1
## ENSG00000179528 ENSG00000179528 1
## ENSG00000179776 ENSG00000179776 6
## ENSG00000179833 ENSG00000179833 11
## ENSG00000179889 ENSG00000179889 13
## ENSG00000179912 ENSG00000179912 17
## ENSG00000179915 ENSG00000179915 16
## ENSG00000179933 ENSG00000179933 5
## ENSG00000179941 ENSG00000179941 2
## ENSG00000179950 ENSG00000179950 21
## ENSG00000179988 ENSG00000179988 22
## ENSG00000180182 ENSG00000180182 11
## ENSG00000180198 ENSG00000180198 31
## ENSG00000180370 ENSG00000180370 17
## ENSG00000180549 ENSG00000180549 18
## ENSG00000180992 ENSG00000180992 1
## ENSG00000181007 ENSG00000181007 1
## ENSG00000181045 ENSG00000181045 8
## ENSG00000181192 ENSG00000181192 10
## ENSG00000181350 ENSG00000181350 1
## ENSG00000181381 ENSG00000181381 17
## ENSG00000181392 ENSG00000181392 25
## ENSG00000181481 ENSG00000181481 12
## ENSG00000181610 ENSG00000181610 1
## ENSG00000181666 ENSG00000181666 1
## ENSG00000181754 ENSG00000181754 19
## ENSG00000181852 ENSG00000181852 23
## ENSG00000181873 ENSG00000181873 1
## ENSG00000181915 ENSG00000181915 1
## ENSG00000182118 ENSG00000182118 6
## ENSG00000182154 ENSG00000182154 1
## ENSG00000182158 ENSG00000182158 13
## ENSG00000182162 ENSG00000182162 11
## ENSG00000182183 ENSG00000182183 4
## ENSG00000182263 ENSG00000182263 5
## ENSG00000182326 ENSG00000182326 19
## ENSG00000182378 ENSG00000182378 1
## ENSG00000182379 ENSG00000182379 6
## ENSG00000182389 ENSG00000182389 17
## ENSG00000182504 ENSG00000182504 26
## ENSG00000182578 ENSG00000182578 8
## ENSG00000182704 ENSG00000182704 5
## ENSG00000182809 ENSG00000182809 1
## ENSG00000182885 ENSG00000182885 17
## ENSG00000182901 ENSG00000182901 27
## ENSG00000182923 ENSG00000182923 10
## ENSG00000182952 ENSG00000182952 3
## ENSG00000182973 ENSG00000182973 10
## ENSG00000183011 ENSG00000183011 31
## ENSG00000183023 ENSG00000183023 12
## ENSG00000183044 ENSG00000183044 17
## ENSG00000183087 ENSG00000183087 1
## ENSG00000183092 ENSG00000183092 21
## ENSG00000183117 ENSG00000183117 20
## ENSG00000183172 ENSG00000183172 8
## ENSG00000183185 ENSG00000183185 14
## ENSG00000183283 ENSG00000183283 17
## ENSG00000183323 ENSG00000183323 4
## ENSG00000183337 ENSG00000183337 11
## ENSG00000183340 ENSG00000183340 2
## ENSG00000183431 ENSG00000183431 15
## ENSG00000183474 ENSG00000183474 3
## ENSG00000183520 ENSG00000183520 6
## ENSG00000183530 ENSG00000183530 25
## ENSG00000183576 ENSG00000183576 30
## ENSG00000183578 ENSG00000183578 6
## ENSG00000183617 ENSG00000183617 8
## ENSG00000183665 ENSG00000183665 2
## ENSG00000183763 ENSG00000183763 1
## ENSG00000183765 ENSG00000183765 1
## ENSG00000183785 ENSG00000183785 25
## ENSG00000183801 ENSG00000183801 2
## ENSG00000183813 ENSG00000183813 1
## ENSG00000183853 ENSG00000183853 5
## ENSG00000183955 ENSG00000183955 11
## ENSG00000184007 ENSG00000184007 11
## ENSG00000184009 ENSG00000184009 8
## ENSG00000184083 ENSG00000184083 1
## ENSG00000184232 ENSG00000184232 8
## ENSG00000184292 ENSG00000184292 19
## ENSG00000184384 ENSG00000184384 12
## ENSG00000184402 ENSG00000184402 4
## ENSG00000184432 ENSG00000184432 3
## ENSG00000184545 ENSG00000184545 5
## ENSG00000184602 ENSG00000184602 9
## ENSG00000184787 ENSG00000184787 8
## ENSG00000184792 ENSG00000184792 1
## ENSG00000184898 ENSG00000184898 2
## ENSG00000184900 ENSG00000184900 8
## ENSG00000184924 ENSG00000184924 1
## ENSG00000184979 ENSG00000184979 32
## ENSG00000185033 ENSG00000185033 12
## ENSG00000185043 ENSG00000185043 11
## ENSG00000185049 ENSG00000185049 21
## ENSG00000185055 ENSG00000185055 30
## ENSG00000185158 ENSG00000185158 25
## ENSG00000185271 ENSG00000185271 5
## ENSG00000185272 ENSG00000185272 16
## ENSG00000185480 ENSG00000185480 1
## ENSG00000185561 ENSG00000185561 5
## ENSG00000185619 ENSG00000185619 17
## ENSG00000185627 ENSG00000185627 27
## ENSG00000185669 ENSG00000185669 11
## ENSG00000185686 ENSG00000185686 5
## ENSG00000185736 ENSG00000185736 5
## ENSG00000185813 ENSG00000185813 32
## ENSG00000185825 ENSG00000185825 18
## ENSG00000185880 ENSG00000185880 3
## ENSG00000185920 ENSG00000185920 19
## ENSG00000186001 ENSG00000186001 25
## ENSG00000186026 ENSG00000186026 19
## ENSG00000186073 ENSG00000186073 5
## ENSG00000186132 ENSG00000186132 3
## ENSG00000186174 ENSG00000186174 21
## ENSG00000186193 ENSG00000186193 30
## ENSG00000186197 ENSG00000186197 6
## ENSG00000186280 ENSG00000186280 6
## ENSG00000186281 ENSG00000186281 1
## ENSG00000186298 ENSG00000186298 1
## ENSG00000186318 ENSG00000186318 1
## ENSG00000186376 ENSG00000186376 4
## ENSG00000186446 ENSG00000186446 19
## ENSG00000186448 ENSG00000186448 1
## ENSG00000186470 ENSG00000186470 2
## ENSG00000186645 ENSG00000186645 10
## ENSG00000186654 ENSG00000186654 3
## ENSG00000186665 ENSG00000186665 1
## ENSG00000186812 ENSG00000186812 16
## ENSG00000186818 ENSG00000186818 8
## ENSG00000186951 ENSG00000186951 21
## ENSG00000187105 ENSG00000187105 22
## ENSG00000187116 ENSG00000187116 18
## ENSG00000187134 ENSG00000187134 19
## ENSG00000187147 ENSG00000187147 23
## ENSG00000187164 ENSG00000187164 8
## ENSG00000187166 ENSG00000187166 7
## ENSG00000187187 ENSG00000187187 1
## ENSG00000187231 ENSG00000187231 12
## ENSG00000187554 ENSG00000187554 12
## ENSG00000187566 ENSG00000187566 1
## ENSG00000187569 ENSG00000187569 2
## ENSG00000187601 ENSG00000187601 1
## ENSG00000187676 ENSG00000187676 13
## ENSG00000187726 ENSG00000187726 29
## ENSG00000187758 ENSG00000187758 1
## ENSG00000187792 ENSG00000187792 22
## ENSG00000187800 ENSG00000187800 1
## ENSG00000187824 ENSG00000187824 2
## ENSG00000188000 ENSG00000188000 31
## ENSG00000188033 ENSG00000188033 11
## ENSG00000188037 ENSG00000188037 18
## ENSG00000188177 ENSG00000188177 26
## ENSG00000188211 ENSG00000188211 8
## ENSG00000188234 ENSG00000188234 10
## ENSG00000188343 ENSG00000188343 3
## ENSG00000188375 ENSG00000188375 17
## ENSG00000188419 ENSG00000188419 1
## ENSG00000188452 ENSG00000188452 32
## ENSG00000188636 ENSG00000188636 8
## ENSG00000188725 ENSG00000188725 6
## ENSG00000188735 ENSG00000188735 4
## ENSG00000188886 ENSG00000188886 12
## ENSG00000188921 ENSG00000188921 25
## ENSG00000188938 ENSG00000188938 12
## ENSG00000189067 ENSG00000189067 27
## ENSG00000189077 ENSG00000189077 17
## ENSG00000189144 ENSG00000189144 28
## ENSG00000189159 ENSG00000189159 4
## ENSG00000189164 ENSG00000189164 1
## ENSG00000189195 ENSG00000189195 26
## ENSG00000189337 ENSG00000189337 16
## ENSG00000189430 ENSG00000189430 16
## ENSG00000196072 ENSG00000196072 17
## ENSG00000196123 ENSG00000196123 1
## ENSG00000196126 ENSG00000196126 8
## ENSG00000196141 ENSG00000196141 2
## ENSG00000196199 ENSG00000196199 10
## ENSG00000196227 ENSG00000196227 11
## ENSG00000196230 ENSG00000196230 1
## ENSG00000196247 ENSG00000196247 28
## ENSG00000196305 ENSG00000196305 1
## ENSG00000196358 ENSG00000196358 17
## ENSG00000196363 ENSG00000196363 8
## ENSG00000196365 ENSG00000196365 8
## ENSG00000196369 ENSG00000196369 12
## ENSG00000196378 ENSG00000196378 21
## ENSG00000196388 ENSG00000196388 1
## ENSG00000196405 ENSG00000196405 13
## ENSG00000196419 ENSG00000196419 1
## ENSG00000196436 ENSG00000196436 22
## ENSG00000196465 ENSG00000196465 1
## ENSG00000196526 ENSG00000196526 5
## ENSG00000196584 ENSG00000196584 19
## ENSG00000196652 ENSG00000196652 28
## ENSG00000196653 ENSG00000196653 1
## ENSG00000196743 ENSG00000196743 6
## ENSG00000196747 ENSG00000196747 25
## ENSG00000196782 ENSG00000196782 17
## ENSG00000196872 ENSG00000196872 16
## ENSG00000196923 ENSG00000196923 17
## ENSG00000196943 ENSG00000196943 21
## ENSG00000196976 ENSG00000196976 1
## ENSG00000197016 ENSG00000197016 19
## ENSG00000197063 ENSG00000197063 29
## ENSG00000197093 ENSG00000197093 16
## ENSG00000197279 ENSG00000197279 28
## ENSG00000197283 ENSG00000197283 22
## ENSG00000197302 ENSG00000197302 2
## ENSG00000197312 ENSG00000197312 1
## ENSG00000197442 ENSG00000197442 17
## ENSG00000197451 ENSG00000197451 8
## ENSG00000197461 ENSG00000197461 1
## ENSG00000197566 ENSG00000197566 1
## ENSG00000197568 ENSG00000197568 1
## ENSG00000197620 ENSG00000197620 12
## ENSG00000197641 ENSG00000197641 5
## ENSG00000197747 ENSG00000197747 8
## ENSG00000197771 ENSG00000197771 3
## ENSG00000197776 ENSG00000197776 22
## ENSG00000197782 ENSG00000197782 19
## ENSG00000197785 ENSG00000197785 1
## ENSG00000197857 ENSG00000197857 4
## ENSG00000197935 ENSG00000197935 19
## ENSG00000197937 ENSG00000197937 19
## ENSG00000197956 ENSG00000197956 18
## ENSG00000197977 ENSG00000197977 22
## ENSG00000197978 ENSG00000197978 19
## ENSG00000197992 ENSG00000197992 26
## ENSG00000198178 ENSG00000198178 26
## ENSG00000198286 ENSG00000198286 1
## ENSG00000198324 ENSG00000198324 30
## ENSG00000198336 ENSG00000198336 2
## ENSG00000198353 ENSG00000198353 6
## ENSG00000198431 ENSG00000198431 18
## ENSG00000198455 ENSG00000198455 32
## ENSG00000198502 ENSG00000198502 8
## ENSG00000198624 ENSG00000198624 29
## ENSG00000198673 ENSG00000198673 25
## ENSG00000198700 ENSG00000198700 1
## ENSG00000198730 ENSG00000198730 5
## ENSG00000198838 ENSG00000198838 22
## ENSG00000198848 ENSG00000198848 20
## ENSG00000198870 ENSG00000198870 8
## ENSG00000198876 ENSG00000198876 16
## ENSG00000198945 ENSG00000198945 21
## ENSG00000198959 ENSG00000198959 6
## ENSG00000198964 ENSG00000198964 25
## ENSG00000203546 ENSG00000203546 1
## ENSG00000203667 ENSG00000203667 25
## ENSG00000203705 ENSG00000203705 26
## ENSG00000203814 ENSG00000203814 26
## ENSG00000204104 ENSG00000204104 1
## ENSG00000204131 ENSG00000204131 17
## ENSG00000204161 ENSG00000204161 4
## ENSG00000204178 ENSG00000204178 4
## ENSG00000204271 ENSG00000204271 1
## ENSG00000204291 ENSG00000204291 19
## ENSG00000204388 ENSG00000204388 3
## ENSG00000204389 ENSG00000204389 16
## ENSG00000204574 ENSG00000204574 3
## ENSG00000204583 ENSG00000204583 19
## ENSG00000204590 ENSG00000204590 12
## ENSG00000204815 ENSG00000204815 29
## ENSG00000204909 ENSG00000204909 16
## ENSG00000204923 ENSG00000204923 2
## ENSG00000204991 ENSG00000204991 2
## ENSG00000205038 ENSG00000205038 1
## ENSG00000205236 ENSG00000205236 10
## ENSG00000205339 ENSG00000205339 1
## ENSG00000205362 ENSG00000205362 2
## ENSG00000205517 ENSG00000205517 16
## ENSG00000205571 ENSG00000205571 32
## ENSG00000205639 ENSG00000205639 21
## ENSG00000205730 ENSG00000205730 8
## ENSG00000205937 ENSG00000205937 29
## ENSG00000206562 ENSG00000206562 1
## ENSG00000211448 ENSG00000211448 19
## ENSG00000213214 ENSG00000213214 19
## ENSG00000213380 ENSG00000213380 6
## ENSG00000213588 ENSG00000213588 19
## ENSG00000213694 ENSG00000213694 8
## ENSG00000213719 ENSG00000213719 18
## ENSG00000213859 ENSG00000213859 1
## ENSG00000213918 ENSG00000213918 25
## ENSG00000213923 ENSG00000213923 5
## ENSG00000213988 ENSG00000213988 6
## ENSG00000214226 ENSG00000214226 3
## ENSG00000214300 ENSG00000214300 1
## ENSG00000214706 ENSG00000214706 1
## ENSG00000214872 ENSG00000214872 17
## ENSG00000214941 ENSG00000214941 1
## ENSG00000215009 ENSG00000215009 22
## ENSG00000215784 ENSG00000215784 3
## ENSG00000215790 ENSG00000215790 16
## ENSG00000215817 ENSG00000215817 17
## ENSG00000219481 ENSG00000219481 32
## ENSG00000219626 ENSG00000219626 10
## ENSG00000221821 ENSG00000221821 21
## ENSG00000221994 ENSG00000221994 25
## ENSG00000223865 ENSG00000223865 1
## ENSG00000226479 ENSG00000226479 16
## ENSG00000227124 ENSG00000227124 1
## ENSG00000232040 ENSG00000232040 19
## ENSG00000232434 ENSG00000232434 1
## ENSG00000233608 ENSG00000233608 1
## ENSG00000236320 ENSG00000236320 19
## ENSG00000239388 ENSG00000239388 22
## ENSG00000239887 ENSG00000239887 3
## ENSG00000239920 ENSG00000239920 10
## ENSG00000240445 ENSG00000240445 27
## ENSG00000242612 ENSG00000242612 1
## ENSG00000243772 ENSG00000243772 3
## ENSG00000244165 ENSG00000244165 8
## ENSG00000244242 ENSG00000244242 29
## ENSG00000244405 ENSG00000244405 6
## ENSG00000245848 ENSG00000245848 8
## ENSG00000248405 ENSG00000248405 7
## ENSG00000248993 ENSG00000248993 8
## ENSG00000249242 ENSG00000249242 1
## ENSG00000250264 ENSG00000250264 17
## ENSG00000254979 ENSG00000254979 29
## ENSG00000254999 ENSG00000254999 8
## ENSG00000255872 ENSG00000255872 28
## ENSG00000256229 ENSG00000256229 16
## ENSG00000256235 ENSG00000256235 21
## ENSG00000256566 ENSG00000256566 1
## ENSG00000257207 ENSG00000257207 14
## ENSG00000257335 ENSG00000257335 17
## ENSG00000258643 ENSG00000258643 1
## ENSG00000258890 ENSG00000258890 13
## ENSG00000259330 ENSG00000259330 15
## ENSG00000260861 ENSG00000260861 17
## ENSG00000261052 ENSG00000261052 25
## ENSG00000261652 ENSG00000261652 2
## ENSG00000261832 ENSG00000261832 25
## ENSG00000262633 ENSG00000262633 22
## ENSG00000263001 ENSG00000263001 21
## ENSG00000263528 ENSG00000263528 8
## ENSG00000263715 ENSG00000263715 19
## ENSG00000264364 ENSG00000264364 17
## ENSG00000266028 ENSG00000266028 12
## ENSG00000266302 ENSG00000266302 2
## ENSG00000266338 ENSG00000266338 19
## ENSG00000266412 ENSG00000266412 12
## ENSG00000266524 ENSG00000266524 1
## ENSG00000267127 ENSG00000267127 2
## ENSG00000267179 ENSG00000267179 16
## ENSG00000267561 ENSG00000267561 19
## ENSG00000268043 ENSG00000268043 25
## ENSG00000268350 ENSG00000268350 27
## ENSG00000268861 ENSG00000268861 4
## ENSG00000269028 ENSG00000269028 27
## ENSG00000271503 ENSG00000271503 1
## ENSG00000272325 ENSG00000272325 15
## ENSG00000272886 ENSG00000272886 11
## ENSG00000273213 ENSG00000273213 33
## ENSG00000273559 ENSG00000273559 17
## ENSG00000274290 ENSG00000274290 16
## ENSG00000274810 ENSG00000274810 19
## ENSG00000275395 ENSG00000275395 6
## ENSG00000275713 ENSG00000275713 2
## ENSG00000276070 ENSG00000276070 13
## ENSG00000276085 ENSG00000276085 28
## ENSG00000276234 ENSG00000276234 1
## ENSG00000277117 ENSG00000277117 8
## ENSG00000277224 ENSG00000277224 10
## ENSG00000277443 ENSG00000277443 12
## ENSG00000277632 ENSG00000277632 3
## ENSG00000277791 ENSG00000277791 27
## ENSG00000278828 ENSG00000278828 4
## ENSG00000280433 ENSG00000280433 11
## ENSG00000280670 ENSG00000280670 22
## ENSG00000280969 ENSG00000280969 16
## ENSG00000282988 ENSG00000282988 16
## ENSG00000283149 ENSG00000283149 31
## ENSG00000283977 ENSG00000283977 23
## ENSG00000285000 ENSG00000285000 19
## ENSG00000285130 ENSG00000285130 8
## ENSG00000285446 ENSG00000285446 31
## ENSG00000285708 ENSG00000285708 17
## ENSG00000285816 ENSG00000285816 124.4.2 Look at only the differential genes
A good suggestion from Theresa was to examine only the most variant genes from failure vs. cure and see how they change the clustering/etc results. This is my attempt to address this query.
hs_clinic_topn <- sm(extract_significant_genes(hs_clinic_table, n = 100))## Error in extract_significant_genes(hs_clinic_table, n = 100): object 'hs_clinic_table' not foundtable <- "failure_vs_cure"
wanted <- rbind(hs_clinic_topn[["deseq"]][["ups"]][[table]],
hs_clinic_topn[["deseq"]][["downs"]][[table]])## Error in eval(quote(list(...)), env): object 'hs_clinic_topn' not foundsmall_expt <- exclude_genes_expt(hs_clinical_nobiop, ids = rownames(wanted), method = "keep")## Error in h(simpleError(msg, call)): error in evaluating the argument 'x' in selecting a method for function 'rownames': object 'wanted' not foundsmall_norm <- sm(normalize_expt(small_expt, transform = "log2", convert = "cpm",
norm = "quant", filter = TRUE))## Error in normalize_expt(small_expt, transform = "log2", convert = "cpm", : object 'small_expt' not foundplot_pca(small_norm)$plot## Error in plot_pca(small_norm): object 'small_norm' not foundsmall_nb <- normalize_expt(small_expt, transform = "log2", convert = "cpm",
batch = "svaseq", norm = "quant", filter = TRUE)## Error in normalize_expt(small_expt, transform = "log2", convert = "cpm", : object 'small_expt' not foundplot_pca(small_nb)$plot## Error in plot_pca(small_nb): object 'small_nb' not found## DESeq2 MA plot of failure / cure
hs_clinic_table[["plots"]][["failure_vs_cure"]][["deseq_ma_plots"]]$plot## Error in eval(expr, envir, enclos): object 'hs_clinic_table' not found## DESeq2 Volcano plot of failure / cure
hs_clinic_table[["plots"]][["failure_vs_cure"]][["deseq_vol_plots"]]$plot## Error in eval(expr, envir, enclos): object 'hs_clinic_table' not found4.4.3 g:Profiler results using the significant up and down genes
ups <- hs_clinic_sig[["deseq"]][["ups"]][[1]]## Error in eval(expr, envir, enclos): object 'hs_clinic_sig' not founddowns <- hs_clinic_sig[["deseq"]][["downs"]][[1]]## Error in eval(expr, envir, enclos): object 'hs_clinic_sig' not foundhs_clinic_gprofiler_ups <- simple_gprofiler(ups)## Error in simple_gprofiler(ups): object 'ups' not foundhs_clinic_gprofiler_ups[["pvalue_plots"]][["bpp_plot_over"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_gprofiler_ups' not foundhs_clinic_gprofiler_ups[["pvalue_plots"]][["mfp_plot_over"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_gprofiler_ups' not foundhs_clinic_gprofiler_ups[["pvalue_plots"]][["reactome_plot_over"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_gprofiler_ups' not found##hs_try2 <- simple_gprofiler2(ups)
hs_clinic_gprofiler_downs <- simple_gprofiler(downs)## Error in simple_gprofiler(downs): object 'downs' not foundhs_clinic_gprofiler_downs[["pvalue_plots"]][["bpp_plot_over"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_gprofiler_downs' not foundhs_clinic_gprofiler_downs[["pvalue_plots"]][["mfp_plot_over"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_gprofiler_downs' not foundhs_clinic_gprofiler_downs[["pvalue_plots"]][["reactome_plot_over"]]## Error in eval(expr, envir, enclos): object 'hs_clinic_gprofiler_downs' not found4.5 Perform GSVA on the clinical samples
hs_celltype_gsva_c2 <- sm(simple_gsva(individual_celltypes))
hs_celltype_gsva_c2_sig <- sm(get_sig_gsva_categories(
hs_celltype_gsva_c2,
excel = "excel/individual_celltypes_gsva_c2.xlsx"))
broad_c7 <- GSEABase::getGmt("reference/msigdb/c7.all.v7.2.entrez.gmt",
collectionType = GSEABase::BroadCollection(category = "c7"),
geneIdType = GSEABase::EntrezIdentifier())
hs_celltype_gsva_c7 <- sm(simple_gsva(individual_celltypes, signatures = broad_c7,
msig_xml = "reference/msigdb_v7.2.xml", cores = 10))
hs_celltype_gsva_c7_sig <- sm(get_sig_gsva_categories(
hs_celltype_gsva_c7,
excel = "excel/individual_celltypes_gsva_c7.xlsx"))4.5.1 Print some plots of the GSVA outputs
## The raw heatmap of the C2 values
hs_celltype_gsva_c2_sig[["raw_plot"]]
## The 'significance' scores of the C2 values
hs_celltype_gsva_c2_sig[["score_plot"]]
## The subset of scores for categories deemed significantly different.
hs_celltype_gsva_c2_sig[["subset_plot"]]
## The raw heatmap of the C7 values
hs_celltype_gsva_c7_sig[["raw_plot"]]
## The 'significance' scores of the C7 values
hs_celltype_gsva_c7_sig[["score_plot"]]
## The subset of scores for categories deemed significantly different.
hs_celltype_gsva_c7_sig[["subset_plot"]]
5 Individual Cell types
The following blocks split the samples into a few groups by sample type and look at the distributions between them.
5.1 Implementation details
Get top/bottom n genes for each cell type, using clinical outcome as the factor of interest. For the moment, use sva for the DE analysis. Provide cpms for the top/bottom n genes.
Start with top/bottom 200. Perform default logFC and p-value as well.
5.2 Monocytes
5.2.1 Evaluate Monocyte samples
mono <- subset_expt(hs_valid, subset = "typeofcells=='monocytes'") %>%
set_expt_conditions(fact = "clinicaloutcome") %>%
set_expt_batches(fact = "donor") %>%
set_expt_colors(colors = chosen_colors)## subset_expt(): There were 116, now there are 22 samples.## FIXME set_expt_colors should speak up if there are mismatches here!!!
save_result <- save(mono, file = "rda/monocyte_expt.rda")
mono_norm <- normalize_expt(mono, convert = "cpm", filter = TRUE,
transform = "log2", norm = "quant")## Removing 8966 low-count genes (10975 remaining).## transform_counts: Found 9 values equal to 0, adding 1 to the matrix.plt <- plot_pca(mono_norm, plot_labels = FALSE)$plot
pp(file = glue("images/mono_pca_normalized-v{ver}.pdf"), image = plt)
mono_nb <- normalize_expt(mono, convert = "cpm", filter = TRUE,
transform = "log2", batch = "svaseq")## Removing 8966 low-count genes (10975 remaining).## batch_counts: Before batch/surrogate estimation, 1202 entries are x==0: 0%.## batch_counts: Before batch/surrogate estimation, 13643 entries are 0<x<1: 6%.## Setting 423 low elements to zero.## transform_counts: Found 423 values equal to 0, adding 1 to the matrix.plt <- plot_pca(mono_nb, plot_labels = FALSE)$plot
pp(file = glue("images/mono_pca_normalized_batch-v{ver}.pdf"), image = plt)
5.2.2 DE of Monocyte samples
5.2.2.1 Without sva
mono_de <- sm(all_pairwise(mono, model_batch = FALSE, filter = TRUE))mono_tables <- sm(combine_de_tables(
mono_de, keepers = keepers,
excel = glue::glue("excel/monocyte_clinical_all_tables-v{ver}.xlsx")))
written <- write_xlsx(data = mono_tables[["data"]][[1]],
excel = glue::glue("excel/monocyte_clinical_table-v{ver}.xlsx"))
mono_sig <- sm(extract_significant_genes(mono_tables, according_to = "deseq"))
written <- write_xlsx(data = mono_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/monocyte_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = mono_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/monocyte_clinical_sigdown-v{ver}.xlsx"))
mono_pct_sig <- sm(extract_significant_genes(mono_tables, n = 200,
lfc = NULL, p = NULL, according_to = "deseq"))
written <- write_xlsx(data = mono_pct_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/monocyte_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = mono_pct_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/monocyte_clinical_sigdown_pct-v{ver}.xlsx"))
mono_sig$summary_df## data frame with 0 columns and 1 row## Print out a table of the cpm values for other explorations.
mono_cpm <- sm(normalize_expt(mono, convert = "cpm"))
written <- write_xlsx(data = exprs(mono_cpm),
excel = glue::glue("excel/monocyte_cpm_before_batch-v{ver}.xlsx"))
mono_bcpm <- sm(normalize_expt(mono, filter = TRUE, convert = "cpm", batch = "svaseq"))
written <- write_xlsx(data = exprs(mono_bcpm),
excel = glue::glue("excel/monocyte_cpm_after_batch-v{ver}.xlsx"))5.2.2.2 With sva
mono_de_sva <- sm(all_pairwise(mono, model_batch = "svaseq", filter = TRUE))mono_tables_sva <- sm(combine_de_tables(
mono_de_sva, keepers = keepers,
excel = glue::glue("excel/monocyte_clinical_all_tables_sva-v{ver}.xlsx")))
mono_sig_sva <- sm(extract_significant_genes(
mono_tables_sva,
excel = glue::glue("excel/monocyte_clinical_sig_tables_sva-v{ver}.xlsx"),
according_to = "deseq"))5.2.2.3 Monocyte DE plots
First print out the DE plots without and then with sva estimates.
## DESeq2 MA plot of failure / cure
mono_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure
mono_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
## DESeq2 MA plot of failure / cure with svaseq
mono_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure with svaseq
mono_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
5.2.2.4 Monocyte ontology search
ups <- mono_sig[["deseq"]][["ups"]][["fail_vs_cure"]]
downs <- mono_sig[["deseq"]][["downs"]][["fail_vs_cure"]]
mono_up_gp <- simple_gprofiler(sig_genes = ups)## Performing gProfiler GO search of 153 genes against hsapiens.## GO search found 33 hits.## Performing gProfiler KEGG search of 153 genes against hsapiens.## KEGG search found 2 hits.## Performing gProfiler REAC search of 153 genes against hsapiens.## REAC search found 1 hits.## Performing gProfiler MI search of 153 genes against hsapiens.## MI search found 0 hits.## Performing gProfiler TF search of 153 genes against hsapiens.## TF search found 2 hits.## Performing gProfiler CORUM search of 153 genes against hsapiens.## CORUM search found 1 hits.## Performing gProfiler HP search of 153 genes against hsapiens.## HP search found 0 hits.mono_up_gp[["pvalue_plots"]][["bpp_plot_over"]]
mono_up_gp[["pvalue_plots"]][["mfp_plot_over"]]
mono_up_gp[["pvalue_plots"]][["reactome_plot_over"]]
mono_down_gp <- simple_gprofiler(sig_genes = downs)## Performing gProfiler GO search of 293 genes against hsapiens.## GO search found 60 hits.## Performing gProfiler KEGG search of 293 genes against hsapiens.## KEGG search found 2 hits.## Performing gProfiler REAC search of 293 genes against hsapiens.## REAC search found 1 hits.## Performing gProfiler MI search of 293 genes against hsapiens.## MI search found 0 hits.## Performing gProfiler TF search of 293 genes against hsapiens.## TF search found 31 hits.## Performing gProfiler CORUM search of 293 genes against hsapiens.## CORUM search found 2 hits.## Performing gProfiler HP search of 293 genes against hsapiens.## HP search found 0 hits.mono_down_gp[["pvalue_plots"]][["bpp_plot_over"]]
mono_down_gp[["pvalue_plots"]][["mfp_plot_over"]]
mono_down_gp[["pvalue_plots"]][["reactome_plot_over"]]
5.2.2.5 Monocyte MSigDB query
broad_c7 <- GSEABase::getGmt("reference/msigdb/c7.all.v7.2.entrez.gmt",
collectionType = GSEABase::BroadCollection(category = "c7"),
geneIdType = GSEABase::EntrezIdentifier())
mono_up_goseq_msig <- goseq_msigdb(sig_genes = ups, signatures = broad_c7,
signature_category = "c7", length_db = hs_length)## Before conversion: 153, after conversion: 151.## Before conversion: 227921, after conversion: 35341.## Found 136 go_db genes and 151 length_db genes out of 151.mono_down_goseq_msig <- goseq_msigdb(sig_genes = downs, signatures = broad_c7,
signature_category = "c7", length_db = hs_length)## Before conversion: 293, after conversion: 290.## Before conversion: 227921, after conversion: 35341.## Found 278 go_db genes and 290 length_db genes out of 290.5.2.2.6 Plot of similar experiments
## Monocyte genes with increased expression in the failed samples
## share genes with the following experiments
mono_up_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
## Monocyte genes with increased expression in the cured samples
## share genes with the following experiments
mono_down_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
5.2.3 Evaluate Neutrophil samples
neut <- subset_expt(hs_valid, subset = "typeofcells=='neutrophils'") %>%
set_expt_conditions(fact = "clinicaloutcome") %>%
set_expt_batches(fact = "donor") %>%
set_expt_colors(colors = chosen_colors)## subset_expt(): There were 116, now there are 21 samples.save_result <- save(neut, file = "rda/neutrophil_expt.rda")
neut_norm <- sm(normalize_expt(neut, convert = "cpm", filter = TRUE, transform = "log2"))
plt <- plot_pca(neut_norm, plot_labels = FALSE)$plot
pp(file = glue("images/neut_pca_normalized-v{ver}.pdf"), image = plt)
neut_nb <- sm(normalize_expt(neut, convert = "cpm", filter = TRUE,
transform = "log2", batch = "svaseq"))
plt <- plot_pca(neut_nb, plot_labels = FALSE)$plot
pp(file = glue("images/neut_pca_normalized_svaseq-v{ver}.pdf"), image = plt)
5.2.4 DE of Netrophil samples
5.2.4.1 Without sva
neut_de <- sm(all_pairwise(neut, model_batch = FALSE, filter = TRUE))neut_tables <- sm(combine_de_tables(
neut_de, keepers = keepers,
excel = glue::glue("excel/neutrophil_clinical_all_tables-v{ver}.xlsx")))
written <- write_xlsx(data = neut_tables[["data"]][[1]],
excel = glue::glue("excel/neutrophil_clinical_table-v{ver}.xlsx"))
neut_sig <- sm(extract_significant_genes(neut_tables, according_to = "deseq"))
written <- write_xlsx(data = neut_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/neutrophil_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = neut_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/neutrophil_clinical_sigdown-v{ver}.xlsx"))
neut_pct_sig <- sm(extract_significant_genes(neut_tables, n = 200, lfc = NULL,
p = NULL, according_to = "deseq"))
written <- write_xlsx(data = neut_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/neutrophil_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = neut_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/neutrophil_clinical_sigdown_pct-v{ver}.xlsx"))
neut_cpm <- sm(normalize_expt(neut, convert = "cpm"))
written <- write_xlsx(data = exprs(neut_cpm),
excel = glue::glue("excel/neutrophil_cpm_before_batch-v{ver}.xlsx"))
neut_bcpm <- sm(normalize_expt(neut, filter = TRUE, batch = "svaseq", convert = "cpm"))
written <- write_xlsx(data = exprs(neut_bcpm),
excel = glue::glue("excel/neutrophil_cpm_after_batch-v{ver}.xlsx"))5.2.4.2 With sva
neut_de_sva <- sm(all_pairwise(neut, model_batch = "svaseq", filter = TRUE))neut_tables_sva <- sm(combine_de_tables(
neut_de_sva, keepers = keepers,
excel = glue::glue("excel/neutrophil_clinical_all_tables_sva-v{ver}.xlsx")))
neut_sig_sva <- sm(extract_significant_genes(
neut_tables_sva,
excel = glue::glue("excel/neutrophil_clinical_sig_tables_sva-v{ver}.xlsx"),
according_to = "deseq"))5.2.4.3 Neutrophil DE plots
## DESeq2 MA plot of failure / cure
neut_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure
neut_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
## DESeq2 MA plot of failure / cure with sva
neut_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure with sva
neut_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
5.2.4.4 Neutrophil ontology search
ups <- neut_sig[["deseq"]][["ups"]][["fail_vs_cure"]]
downs <- neut_sig[["deseq"]][["downs"]][["fail_vs_cure"]]
neut_up_gp <- simple_gprofiler(sig_genes = ups)## Performing gProfiler GO search of 327 genes against hsapiens.## GO search found 25 hits.## Performing gProfiler KEGG search of 327 genes against hsapiens.## KEGG search found 4 hits.## Performing gProfiler REAC search of 327 genes against hsapiens.## REAC search found 63 hits.## Performing gProfiler MI search of 327 genes against hsapiens.## MI search found 0 hits.## Performing gProfiler TF search of 327 genes against hsapiens.## TF search found 56 hits.## Performing gProfiler CORUM search of 327 genes against hsapiens.## CORUM search found 9 hits.## Performing gProfiler HP search of 327 genes against hsapiens.## HP search found 0 hits.neut_up_gp[["pvalue_plots"]][["bpp_plot_over"]]
neut_up_gp[["pvalue_plots"]][["mfp_plot_over"]]
neut_up_gp[["pvalue_plots"]][["reactome_plot_over"]]
neut_down_gp <- simple_gprofiler(downs)## Performing gProfiler GO search of 297 genes against hsapiens.## GO search found 7 hits.## Performing gProfiler KEGG search of 297 genes against hsapiens.## KEGG search found 1 hits.## Performing gProfiler REAC search of 297 genes against hsapiens.## REAC search found 0 hits.## Performing gProfiler MI search of 297 genes against hsapiens.## MI search found 0 hits.## Performing gProfiler TF search of 297 genes against hsapiens.## TF search found 80 hits.## Performing gProfiler CORUM search of 297 genes against hsapiens.## CORUM search found 0 hits.## Performing gProfiler HP search of 297 genes against hsapiens.## HP search found 2 hits.neut_down_gp[["pvalue_plots"]][["bpp_plot_over"]]## NULLneut_down_gp[["pvalue_plots"]][["mfp_plot_over"]]
neut_down_gp[["pvalue_plots"]][["reactome_plot_over"]]## NULL5.2.4.5 Neutrophil GSVA query
neut_up_goseq_msig <- goseq_msigdb(sig_genes = ups, signatures = broad_c7,
signature_category = "c7", length_db = hs_length)## Before conversion: 327, after conversion: 322.## Before conversion: 227921, after conversion: 35341.## Found 305 go_db genes and 322 length_db genes out of 322.neut_down_goseq_msig <- goseq_msigdb(sig_genes = downs, signatures = broad_c7,
signature_category = "c7", length_db = hs_length)## Before conversion: 297, after conversion: 290.## Before conversion: 227921, after conversion: 35341.## Found 283 go_db genes and 290 length_db genes out of 290.5.2.4.6 Plot of similar experiments
## Neutrophil genes with increased expression in the failed samples
## share genes with the following experiments
neut_up_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
## Neutrophil genes with increased expression in the cured samples
## share genes with the following experiments
neut_down_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
5.3 Eosinophils
5.3.1 Evaluate Eosinophil samples
eo <- subset_expt(hs_valid, subset = "typeofcells=='eosinophils'") %>%
set_expt_conditions(fact = "clinicaloutcome") %>%
set_expt_batches(fact = "donor") %>%
set_expt_colors(colors = chosen_colors)## subset_expt(): There were 116, now there are 15 samples.save_result <- save(eo, file = "rda/eosinophil_expt.rda")
eo_norm <- sm(normalize_expt(eo, convert = "cpm", transform = "log2",
norm = "quant", filter = TRUE))
plt <- plot_pca(eo_norm, plot_labels = FALSE)$plot
pp(file = glue("images/eo_pca_normalized-v{ver}.pdf"), image = plt)
eo_nb <- sm(normalize_expt(eo, convert = "cpm", transform = "log2",
filter = TRUE, batch = "svaseq"))
plot_pca(eo_nb)$plot
5.3.2 DE of Eosinophil samples
5.3.2.1 Withouth sva
eo_de <- sm(all_pairwise(eo, model_batch = FALSE, filter = TRUE))eo_tables <- sm(combine_de_tables(
eo_de, keepers = keepers,
excel = glue::glue("excel/eosinophil_clinical_all_tables-v{ver}.xlsx")))
written <- write_xlsx(data = eo_tables[["data"]][[1]],
excel = glue::glue("excel/eosinophil_clinical_table-v{ver}.xlsx"))
eo_sig <- sm(extract_significant_genes(eo_tables, according_to = "deseq"))
written <- write_xlsx(data = eo_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/eosinophil_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = eo_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/eosinophil_clinical_sigdown-v{ver}.xlsx"))
eo_pct_sig <- sm(extract_significant_genes(eo_tables, n = 200,
lfc = NULL, p = NULL, according_to = "deseq"))
written <- write_xlsx(data = eo_pct_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/eosinophil_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = eo_pct_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/eosinophil_clinical_sigdown_pct-v{ver}.xlsx"))
eo_cpm <- sm(normalize_expt(eo, convert = "cpm"))
written <- write_xlsx(data = exprs(eo_cpm),
excel = glue::glue("excel/eosinophil_cpm_before_batch-v{ver}.xlsx"))
eo_bcpm <- sm(normalize_expt(eo, filter = TRUE, batch = "svaseq", convert = "cpm"))
written <- write_xlsx(data = exprs(eo_bcpm),
excel = glue::glue("excel/eosinophil_cpm_after_batch-v{ver}.xlsx"))5.3.2.2 With sva
eo_de_sva <- sm(all_pairwise(eo, model_batch = "svaseq", filter = TRUE))eo_tables_sva <- sm(combine_de_tables(
eo_de_sva, keepers = keepers,
excel = glue::glue("excel/eosinophil_clinical_all_tables_sva-v{ver}.xlsx")))
eo_sig_sva <- sm(extract_significant_genes(
eo_tables_sva,
excel = glue::glue("excel/eosinophil_clinical_sig_tables_sva-v{ver}.xlsx"),
according_to = "deseq"))5.3.2.3 Eosinophil DE plots
## DESeq2 MA plot of failure / cure
eo_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure
eo_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
## DESeq2 MA plot of failure / cure with sva
eo_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure with sva
eo_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
5.3.2.4 Eosinophil ontology search
ups <- eo_sig[["deseq"]][["ups"]][["fail_vs_cure"]]
downs <- eo_sig[["deseq"]][["downs"]][["fail_vs_cure"]]
eo_up_gp <- simple_gprofiler(sig_genes = ups)## Performing gProfiler GO search of 240 genes against hsapiens.## GO search found 70 hits.## Performing gProfiler KEGG search of 240 genes against hsapiens.## KEGG search found 7 hits.## Performing gProfiler REAC search of 240 genes against hsapiens.## REAC search found 10 hits.## Performing gProfiler MI search of 240 genes against hsapiens.## MI search found 0 hits.## Performing gProfiler TF search of 240 genes against hsapiens.## TF search found 48 hits.## Performing gProfiler CORUM search of 240 genes against hsapiens.## CORUM search found 1 hits.## Performing gProfiler HP search of 240 genes against hsapiens.## HP search found 0 hits.eo_up_gp[["pvalue_plots"]][["bpp_plot_over"]]
eo_up_gp[["pvalue_plots"]][["mfp_plot_over"]]
eo_up_gp[["pvalue_plots"]][["reactome_plot_over"]]
eo_down_gp <- simple_gprofiler(downs)## Performing gProfiler GO search of 208 genes against hsapiens.## GO search found 16 hits.## Performing gProfiler KEGG search of 208 genes against hsapiens.## KEGG search found 2 hits.## Performing gProfiler REAC search of 208 genes against hsapiens.## REAC search found 0 hits.## Performing gProfiler MI search of 208 genes against hsapiens.## MI search found 0 hits.## Performing gProfiler TF search of 208 genes against hsapiens.## TF search found 9 hits.## Performing gProfiler CORUM search of 208 genes against hsapiens.## CORUM search found 0 hits.## Performing gProfiler HP search of 208 genes against hsapiens.## HP search found 0 hits.eo_down_gp[["pvalue_plots"]][["bpp_plot_over"]]
eo_down_gp[["pvalue_plots"]][["mfp_plot_over"]]## NULLeo_down_gp[["pvalue_plots"]][["reactome_plot_over"]]## NULL5.3.2.5 Eosinophil MSigDB query
eo_up_goseq_msig <- goseq_msigdb(sig_genes = ups, signatures = broad_c7,
signature_category = "c7", length_db = hs_length)## Before conversion: 240, after conversion: 237.## Before conversion: 227921, after conversion: 35341.## Found 222 go_db genes and 237 length_db genes out of 237.eo_down_goseq_msig <- goseq_msigdb(sig_genes = downs, signatures = broad_c7,
signature_category = "c7", length_db = hs_length)## Before conversion: 208, after conversion: 207.## Before conversion: 227921, after conversion: 35341.## Found 196 go_db genes and 207 length_db genes out of 207.5.3.2.6 Plot of similar experiments
## Eosinophil genes with increased expression in the failed samples
## share genes with the following experiments
eo_up_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
## Eosinophil genes with increased expression in the cured samples
## share genes with the following experiments
eo_down_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
5.4 Biopsies
5.4.1 Evaluate Biopsy samples
biop <- subset_expt(hs_valid, subset = "typeofcells=='biopsy'") %>%
set_expt_conditions(fact = "clinicaloutcome") %>%
set_expt_batches(fact = "donor") %>%
set_expt_colors(colors = chosen_colors)## subset_expt(): There were 116, now there are 40 samples.save_result <- save(biop, file = "rda/biopsy_expt.rda")
biop_norm <- normalize_expt(biop, filter = TRUE, convert = "cpm",
transform = "log2", norm = "quant")## Removing 5816 low-count genes (14125 remaining).## transform_counts: Found 5 values equal to 0, adding 1 to the matrix.plt <- plot_pca(biop_norm, plot_labels = FALSE)$plot
pp(file = glue("images/biop_pca_normalized-v{ver}.pdf"), image = plt)
biop_nb <- sm(normalize_expt(biop, convert = "cpm", filter = TRUE,
transform = "log2", batch = "svaseq"))
plt <- plot_pca(biop_nb, plot_labels = FALSE)$plot
pp(file = glue("images/biop_pca_normalized_svaseq-v{ver}.pdf"), image = plt)
5.4.2 DE of Biopsy samples
5.4.2.1 Without sva
biop_de <- sm(all_pairwise(biop, model_batch = FALSE, filter = TRUE))biop_tables <- combine_de_tables(biop_de, keepers = keepers,
excel = glue::glue("excel/biopsy_clinical_all_tables-v{ver}.xlsx"))## Deleting the file excel/biopsy_clinical_all_tables-v202105.xlsx before writing the tables.written <- write_xlsx(data = biop_tables[["data"]][[1]],
excel = glue::glue("excel/biopsy_clinical_table-v{ver}.xlsx"))
biop_sig <- extract_significant_genes(biop_tables, according_to = "deseq")
##written <- write_xlsx(data = biop_sig[["deseq"]][["ups"]][[1]],
## excel = glue::glue("excel/biopsy_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = biop_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/biopsy_clinical_sigdown-v{ver}.xlsx"))
biop_pct_sig <- extract_significant_genes(biop_tables, n = 200, lfc = NULL, p = NULL, according_to = "deseq")## Getting the top and bottom 200 genes.written <- write_xlsx(data = biop_pct_sig[["deseq"]][["ups"]][[1]],
excel = glue::glue("excel/biopsy_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = biop_pct_sig[["deseq"]][["downs"]][[1]],
excel = glue::glue("excel/biopsy_clinical_sigdown_pct-v{ver}.xlsx"))
biop_cpm <- sm(normalize_expt(biop, convert = "cpm"))
written <- write_xlsx(data = exprs(biop_cpm),
excel = glue::glue("excel/biopsy_cpm_before_batch-v{ver}.xlsx"))
biop_bcpm <- sm(normalize_expt(biop, filter = TRUE, batch = "svaseq", convert = "cpm"))
written <- write_xlsx(data = exprs(biop_bcpm),
excel = glue::glue("excel/biopsy_cpm_after_batch-v{ver}.xlsx"))5.4.2.2 with sva
biop_de_sva <- sm(all_pairwise(biop, model_batch = "svaseq", filter = TRUE))biop_tables_sva <- sm(combine_de_tables(
biop_de_sva, keepers = keepers,
excel = glue::glue("excel/biopsy_clinical_all_tables_sva-v{ver}.xlsx")))
biop_sig_sva <- sm(extract_significant_genes(
biop_tables_sva,
excel = glue::glue("excel/biopsy_clinical_sig_tables_sva-v{ver}.xlsx"),
according_to = "deseq"))5.4.2.3 Biopsy DE plots
## DESeq2 MA plot of failure / cure
biop_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure
biop_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
## DESeq2 MA plot of failure / cure
biop_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot
## DESeq2 Volcano plot of failure / cure
biop_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
6 Look for shared genes among Monocytes/Neutrophils/Eosinophils
We have three variables containing the ‘significant’ DE genes for the three cell types. For this I am choosing (for the moment) to use the sva data.
## mono_sig_sva, neut_sig_sva, eo_sig_sva
sig_vectors <- list(
"monocytes" = c(rownames(mono_sig_sva[["deseq"]][["ups"]][["fail_vs_cure"]]),
rownames(mono_sig_sva[["deseq"]][["downs"]][["fail_vs_cure"]])),
"neutrophils" = c(rownames(neut_sig_sva[["deseq"]][["ups"]][["fail_vs_cure"]]),
rownames(neut_sig_sva[["deseq"]][["downs"]][["fail_vs_cure"]])),
"eosinophils" = c(rownames(eo_sig_sva[["deseq"]][["ups"]][["fail_vs_cure"]]),
rownames(eo_sig_sva[["deseq"]][["downs"]][["fail_vs_cure"]])))
shared_vector <- Vennerable::Venn(Sets = sig_vectors)
Vennerable::plot(shared_vector, doWeights = FALSE)
shared_ids <- shared_vector@IntersectionSets[["111"]]
shared_expt <- exclude_genes_expt(hs_expt, ids = shared_ids, method = "keep")## Before removal, there were 19941 genes, now there are 62.## There are 119 samples which kept less than 90 percent counts.## TMRC30001 TMRC30002 TMRC30003 TMRC30004 TMRC30005 TMRC30006 TMRC30007 TMRC30008
## 0.1334 0.1321 0.1452 0.1312 0.1357 0.1327 0.1900 0.1366
## TMRC30009 TMRC30010 TMRC30015 TMRC30011 TMRC30012 TMRC30013 TMRC30016 TMRC30017
## 0.2988 0.1772 0.4525 0.3133 0.1456 0.1502 0.3791 0.3362
## TMRC30050 TMRC30052 TMRC30071 TMRC30056 TMRC30058 TMRC30105 TMRC30094 TMRC30080
## 0.1630 0.1376 0.1310 0.1523 0.1479 0.1785 0.1916 0.3487
## TMRC30103 TMRC30018 TMRC30107 TMRC30083 TMRC30019 TMRC30082 TMRC30093 TMRC30113
## 0.2849 0.3281 0.1099 0.1274 0.3455 0.4193 0.3785 0.4528
## TMRC30096 TMRC30014 TMRC30021 TMRC30029 TMRC30020 TMRC30038 TMRC30039 TMRC30023
## 0.2930 0.3490 0.2797 0.3413 0.3265 0.3067 0.2177 0.2704
## TMRC30025 TMRC30022 TMRC30046 TMRC30047 TMRC30048 TMRC30026 TMRC30030 TMRC30031
## 0.3093 0.3647 0.1282 0.1514 0.1759 0.4086 0.1588 0.2189
## TMRC30032 TMRC30024 TMRC30040 TMRC30033 TMRC30049 TMRC30053 TMRC30054 TMRC30115
## 0.1938 0.1435 0.1941 0.1604 0.1020 0.2105 0.1537 0.1208
## TMRC30037 TMRC30027 TMRC30028 TMRC30034 TMRC30035 TMRC30036 TMRC30044 TMRC30055
## 0.1993 0.2707 0.1876 0.1591 0.2358 0.1726 0.2872 0.1184
## TMRC30068 TMRC30070 TMRC30041 TMRC30042 TMRC30043 TMRC30045 TMRC30059 TMRC30060
## 0.1634 0.1487 0.2329 0.2351 0.2951 0.2449 1.1027 1.2064
## TMRC30061 TMRC30062 TMRC30063 TMRC30051 TMRC30064 TMRC30065 TMRC30066 TMRC30067
## 0.7306 1.1148 0.7890 0.7236 0.7793 0.8492 0.6197 0.6485
## TMRC30057 TMRC30069 TMRC30116 TMRC30074 TMRC30072 TMRC30076 TMRC30077 TMRC30078
## 0.6029 0.5541 0.2304 0.1749 0.1353 0.2308 0.1538 0.1184
## TMRC30088 TMRC30079 TMRC30097 TMRC30075 TMRC30085 TMRC30086 TMRC30087 TMRC30101
## 0.2728 0.1735 0.3129 0.2026 0.1554 0.2878 0.3052 0.1835
## TMRC30089 TMRC30090 TMRC30081 TMRC30092 TMRC30104 TMRC30106 TMRC30114 TMRC30095
## 0.2529 0.1765 0.1700 0.2561 0.1738 0.2750 0.2140 0.2314
## TMRC30108 TMRC30130 TMRC30124 TMRC30131 TMRC30109 TMRC30084 TMRC30098 TMRC30099
## 0.3124 0.2999 0.2175 0.2350 0.2103 0.3192 0.2143 0.2616
## TMRC30100 TMRC30110 TMRC30111 TMRC30102 TMRC30091 TMRC30112 TMRC30073
## 0.1296 0.1444 0.2192 0.1893 0.1869 0.2077 0.2045shared_written <- sm(write_expt(shared_expt, excel="excel/genes_shared_across_celltypes.xlsx"))## Error in princomp.default(x = data, cor = cor) :
## 'princomp' can only be used with more units than variables## Error in plot.window(...) : need finite 'ylim' values## Error in princomp.default(x = data, cor = cor) :
## 'princomp' can only be used with more units than variables## Error in plot.window(...) : need finite 'ylim' values7 Monocytes by visit
- Can you please share with us a PCA (SVA and non-SVA) of the monocytes of the TMRC3 project, but labeling them based on the visit (V1, V2, V3)?
- Can you please share DE lists of V1 vs V2, V1 vs V3, V1 vs. V2+V3 and V2 vs V3?
visit_colors <- chosen_colors <- c("#D95F02", "#7570B3", "#1B9E77")
names(visit_colors) <- c(1, 2, 3)
mono_visit <- subset_expt(hs_valid, subset = "typeofcells=='monocytes'") %>%
set_expt_conditions(fact = "visitnumber") %>%
set_expt_batches(fact = "clinicaloutcome") %>%
set_expt_colors(colors = chosen_colors)## subset_expt(): There were 116, now there are 22 samples.mono_visit_norm <- normalize_expt(mono_visit, filter = TRUE, norm = "quant", convert = "cpm",
transform = "log2")## Removing 8966 low-count genes (10975 remaining).## transform_counts: Found 9 values equal to 0, adding 1 to the matrix.mono_visit_pca <- plot_pca(mono_visit_norm)
pp(file = "images/monocyte_by_visit.png", image = mono_visit_pca$plot)
mono_visit_nb <- normalize_expt(mono_visit, filter = TRUE, convert = "cpm",
batch = "svaseq", transform = "log2")## Removing 8966 low-count genes (10975 remaining).## batch_counts: Before batch/surrogate estimation, 1202 entries are x==0: 0%.## batch_counts: Before batch/surrogate estimation, 13643 entries are 0<x<1: 6%.## Setting 333 low elements to zero.## transform_counts: Found 333 values equal to 0, adding 1 to the matrix.mono_visit_nb_pca <- plot_pca(mono_visit_nb)
pp(file = "images/monocyte_by_visit_nb.png", image = mono_visit_nb_pca$plot)
table(pData(mono_visit_norm)$batch)##
## cure failure lost
## 6 10 6keepers <- list(
"second_vs_first" = c("c2", "c1"),
"third_vs_second" = c("c3", "c2"),
"third_vs_first" = c("c3", "c1"))
mono_visit_de <- all_pairwise(mono_visit, model_batch = "svaseq", filter = TRUE)## batch_counts: Before batch/surrogate estimation, 1202 entries are x==0: 0%.## Plotting a PCA before surrogate/batch inclusion.## Using svaseq to visualize before/after batch inclusion.## Performing a test normalization with: raw## Removing 0 low-count genes (10975 remaining).## batch_counts: Before batch/surrogate estimation, 1202 entries are x==0: 0%.## batch_counts: Before batch/surrogate estimation, 13643 entries are 0<x<1: 6%.## Setting 333 low elements to zero.## transform_counts: Found 333 values equal to 0, adding 1 to the matrix.## Finished running DE analyses, collecting outputs.## Comparing analyses.mono_visit_tables <- combine_de_tables(
mono_visit_de,
keepers = keepers,
excel = glue::glue("excel/mono_visit_tables-v{ver}.xlsx"))## Deleting the file excel/mono_visit_tables-v202105.xlsx before writing the tables.new_factor <- pData(mono_visit)[["visitnumber"]]
not_one_idx <- new_factor != 1
new_factor[not_one_idx] <- "not_1"## Warning in `[<-.factor`(`*tmp*`, not_one_idx, value = "not_1"): invalid factor
## level, NA generatedmono_one_vs <- set_expt_conditions(mono_visit, new_factor)
mono_one_vs_de <- all_pairwise(mono_one_vs, model_batch = "svaseq", filter = TRUE)## batch_counts: Before batch/surrogate estimation, 1202 entries are x==0: 0%.## Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]): contrasts can be applied only to factors with 2 or more levelsmono_one_vs_tables <- combine_de_tables(
mono_one_vs_de,
excel = glue::glue("excel/mono_one_vs_tables-v{ver}.xlsx"))## Error in combine_de_tables(mono_one_vs_de, excel = glue::glue("excel/mono_one_vs_tables-v{ver}.xlsx")): object 'mono_one_vs_de' not found8 Test TSP
In writing the following, I quickly realized that tspair was not joking when it said it is intended for small numbers of genes. For a full expressionset of human data it is struggling. I like the idea, it may prove worth while to spend some time optimizing the package so that it is more usable.
expt <- hs_clinical_nobiop
simple_tsp <- function(expt, column = "condition") {
facts <- levels(as.factor(pData(expt)[[column]]))
retlist <- list()
if (length(facts) < 2) {
stop("This requires factors with at least 2 levels.")
} else if (length(facts) == 2) {
retlist <- simple_tsp_pair(expt, column = column)
} else {
for (first in 1:(length(facts) - 1)) {
for (second in 2:(length(facts))) {
if (first < second) {
name <- glue::glue("{facts[first]}_vs_{facts[second]}")
message("Starting ", name, ".")
substring <- glue::glue("{column}=='{facts[first]}'|{column}=='{facts[second]}'")
subby <- subset_expt(expt, subset=as.character(substring))
retlist[[name]] <- simple_tsp_pair(subby, column = column)
}
}
}
}
}
simple_tsp_pair <- function(subby, column = "condition", repetitions = 50) {
tsp_input <- subby[["expressionset"]]
tsp_output <- tspcalc(tsp_input, column)
tsp_scores <- tspsig(tsp_input, column, B = repetitions)
}
tsp1 <- tspcalc(tsp_input, "condition")if (!isTRUE(get0("skip_load"))) {
pander::pander(sessionInfo())
message(paste0("This is hpgltools commit: ", get_git_commit()))
message(paste0("Saving to ", savefile))
tmp <- sm(saveme(filename = savefile))
}## If you wish to reproduce this exact build of hpgltools, invoke the following:## > git clone http://github.com/abelew/hpgltools.git## > git reset 68b1ce610bf0c750d9a3ed2f6bd2a529b1744c29## This is hpgltools commit: Thu May 27 17:01:01 2021 -0400: 68b1ce610bf0c750d9a3ed2f6bd2a529b1744c29## Saving to tmrc3_02sample_estimation_v202105.rda.xztmp <- loadme(filename = savefile)---
title: "TMRC3 Comprehensive Data Analysis: 202105"
author: "atb abelew@gmail.com"
date: "`r Sys.Date()`"
output:
 html_document:
  code_download: true
  code_folding: show
  fig_caption: true
  fig_height: 7
  fig_width: 7
  highlight: default
  keep_md: false
  mode: selfcontained
  number_sections: true
  self_contained: true
  theme: readable
  toc: true
  toc_float:
   collapsed: false
   smooth_scroll: false
---

<style>
  body .main-container {
    max-width: 1600px;
  }
</style>

```{r options, include = FALSE}
library(hpgltools)
tt <- sm(devtools::load_all("~/hpgltools"))
knitr::opts_knit$set(progress = TRUE,
                     verbose = TRUE,
                     width = 120,
                     echo = TRUE)
knitr::opts_chunk$set(error = TRUE,
                      fig.width = 12,
                      fig.height = 12,
                      dpi = 96)
old_options <- options(digits = 4,
                       stringsAsFactors = FALSE,
                       knitr.duplicate.label = "allow")
ggplot2::theme_set(ggplot2::theme_bw(base_size = 12))
ver <- "202105"
rundate <- format(Sys.Date(), format = "%Y%m%d")

rmd_file <- glue::glue("tmrc3_02sample_estimation_v{ver}.Rmd")
savefile <- gsub(pattern = "\\.Rmd", replace = "\\.rda\\.xz", x = rmd_file)
```

# Annotation

We take the annotation data from ensembl's biomart instance.  The genome which
was used to map the data was hg38 revision 100.  My default when using biomart is
to load the data from 1 year before the current date.

```{r hs_annot}
hs_annot <- sm(load_biomart_annotations(year = "2020"))
hs_annot <- hs_annot[["annotation"]]
hs_annot[["transcript"]] <- paste0(rownames(hs_annot), ".", hs_annot[["version"]])
rownames(hs_annot) <- make.names(hs_annot[["ensembl_gene_id"]], unique = TRUE)
tx_gene_map <- hs_annot[, c("transcript", "ensembl_gene_id")]

summary(hs_annot)
```

```{r hs_go}
hs_go <- sm(load_biomart_go()[["go"]])
hs_length <- hs_annot[, c("ensembl_gene_id", "cds_length")]
colnames(hs_length) <- c("ID", "length")
```

# Introduction

This document is intended to provide an overview of TMRC3 samples which have
been sequenced.  It includes some plots and analyses showing the relationships
among the samples as well as some differential analyses when possible.

# Sample Estimation

## Generate expressionsets

The sample sheet is copied from our shared online sheet and updated with each release
of sequencing data.

```{r samplesheet}
samplesheet <- "sample_sheets/tmrc3_samples_20210512.xlsx"
```

### Hisat2 expressionsets

The first thing to note is the large range in coverage.  There are multiple
samples with coverage which is too low to use.  These will be removed shortly.

In the following block I immediately exclude any non-coding reads as well.

```{r all_new_hisat2}
## Create the expressionset and immediately pass it to a filter
## removing the non protein coding genes.
sanitize_columns <- c("visitnumber", "clinicaloutcome", "donor",
                      "typeofcells", "clinicalpresentation",
                      "condition", "batch")
hs_expt <- create_expt(samplesheet,
                       file_column = "hg38100hisatfile",
                       savefile = glue::glue("rda/hs_expt_all-v{ver}.rda"),
                       gene_info = hs_annot) %>%
  exclude_genes_expt(column = "gene_biotype", method = "keep",
                     pattern = "protein_coding", meta_column = "ncrna_lost") %>%
  sanitize_expt_metadata(columns = sanitize_columns) %>%
  set_expt_factors(columns = sanitize_columns, class = "factor")

levels(pData(hs_expt[["expressionset"]])[["visitnumber"]]) <- list(
    '0' = "notapplicable", '1' = 1, '2' = 2, '3' = 3)
```

Split this data into CDS and lncRNA.  Oh crap in order to do that I need to recount the data.
Running now (20210518)

```{r lnc_cds}
## lnc_expt <- create_expt(samplesheet,
##                         file_column = "hg38100lncfile",
##                         gene_info = hs_annot)
```

#### Initial metrics

Once the data was loaded, there are a couple of metrics which may be plotted immediately.

```{r initial_metrics}
nonzero <- plot_nonzero(hs_expt)
nonzero$plot

ncrna_lost_df <- as.data.frame(pData(hs_expt)[["ncrna_lost"]])
rownames(ncrna_lost_df) <- rownames(pData(hs_expt))
colnames(ncrna_lost_df) <- "ncrna_lost"

tmpdf <- merge(nonzero$table, ncrna_lost_df, by = "row.names")
rownames(tmpdf) <- tmpdf[["Row.names"]]
tmpdf[["Row.names"]] <- NULL

ggplot(tmpdf, aes(x=ncrna_lost, y=nonzero_genes)) +
  ggplot2::geom_point() +
  ggplot2::ggtitle("Nonzero genes with respect to percent counts 
lost when ncRNA was removed.")
```

Najib doesn't want this plot, but I am using it to check new samples,
so will hide it from general use.

```{r libsize}
libsize <- plot_libsize(hs_expt)
libsize$plot
```

## Minimum coverage sample filtering

I arbitrarily chose 11,000 non-zero genes as a minimum.  We may
want this to be higher.

```{r hisat2_write, fig.show = "hide"}
hs_valid <- subset_expt(hs_expt, nonzero = 11000)

valid_write <- sm(write_expt(hs_valid, excel = glue("excel/hs_valid-v{ver}.xlsx")))
```

# Project Aims

The project seeks to determine the relationship of the innate immune response
and inflammatory signaling to the clinical outcome of antileishmanial drug
treatment. We will test the hypothesis that the profile of innate immune cell
activation and their dynamics through the course of treatment differ between CL
patients with prospectively determined therapeutic cure or failure.

This will be achieved through the characterization of the in vivo dynamics of
blood-derived monocyte, neutrophil and eosinophil transcriptome before, during
and at the end of treatment in CL patients. Cell-type specific transcriptomes,
composite signatures and time-response expression profiles will be contrasted
among patients with therapeutic cure or failure.

## Preparation

To address these, I added to the end of the sample sheet columns named
'condition', 'batch', 'donor', and 'time'.  These are filled in with shorthand
values according to the above.

## Global view

Before addressing the questions explicitly by subsetting the data, I want to get
a look at the samples as they are.

```{r pre_questions}
new_names <- pData(hs_valid)[["samplename"]]
hs_valid <- hs_valid %>%
  set_expt_batches(fact = "cellssource") %>%
  set_expt_conditions(fact = "typeofcells") %>%
  set_expt_samplenames(newnames = new_names)

all_norm <- sm(normalize_expt(hs_valid, transform = "log2", norm = "quant",
                              convert = "cpm", filter = TRUE))

all_pca <- plot_pca(all_norm, plot_labels = FALSE,
                    plot_title = "PCA - Cell type", size_column = "visitnumber")
pp(file = glue("images/tmrc3_pca_nolabels-v{ver}.png"), image = all_pca$plot)

write.csv(all_pca$table, file = "coords/hs_donor_pca_coords.csv")
plot_corheat(all_norm, plot_title = "Heirarchical clustering:
         cell types")$plot
```

## Examine samples relevant to clinical outcome

Now let us consider only the samples for which we have a clinical outcome.
These fall primarily into either 'cured' or 'failed', but some people have not
yet returned to the clinic after the first or second visit.  These are deemed
'lost'.

```{r all_clinical}
hs_clinical <- hs_valid %>%
  set_expt_conditions(fact = "clinicaloutcome") %>%
  set_expt_batches(fact = "typeofcells") %>%
  subset_expt(subset = "typeofcells!='pbmcs'&typeofcells!='macrophages'")

chosen_colors <- c("#D95F02", "#7570B3", "#1B9E77", "#FF0000")
names(chosen_colors) <- c("cure", "failure", "lost", "null")
hs_clinical <- set_expt_colors(hs_clinical, colors = chosen_colors)

newnames <- pData(hs_clinical)[["samplename"]]
hs_clinical <- set_expt_samplenames(hs_clinical, newnames = newnames)

hs_clinical_norm <- sm(normalize_expt(hs_clinical, filter = TRUE, transform = "log2",
                                      convert = "cpm", norm = "quant"))
clinical_pca <- plot_pca(hs_clinical_norm, plot_labels = FALSE,
                         size_column = "visitnumber", cis = NULL,
                         plot_title = "PCA - clinical samples")
pp(file = glue("images/all_clinical_nobatch_pca-v{ver}.png"), image = clinical_pca$plot,
   height = 8, width = 20)
```

### Repeat without the biopsy samples

```{r ibid_nobiopsy}
hs_clinical_nobiop <- hs_clinical %>%
  subset_expt(subset = "typeofcells!='biopsy'")

hs_clinical_nobiop_norm <- sm(normalize_expt(hs_clinical_nobiop, filter = TRUE, transform = "log2",
                                             convert = "cpm", norm = "quant"))
clinical_nobiop_pca <- plot_pca(hs_clinical_nobiop_norm, plot_labels = FALSE, cis = NULL,
                                plot_title = "PCA - clinical samples without biopsies")
pp(file = glue("images/all_clinical_nobiop_nobatch_pca-v{ver}.png"),
   image = clinical_nobiop_pca$plot)
```

### Attempt to correct for the surrogate variables

At this time we have two primary data structures of interest: hs_clinical and hs_clinical_nobiop

```{r clinical_sva}
hs_clinical_nb <- normalize_expt(hs_clinical, filter = TRUE, batch = "svaseq",
                                 transform = "log2", convert = "cpm")
clinical_batch_pca <- plot_pca(hs_clinical_nb, plot_labels = FALSE, cis = NULL,
                               size_column = "visitnumber", plot_title = "PCA - clinical samples")
clinical_batch_pca$plot

hs_clinical_nobiop_nb <- sm(normalize_expt(hs_clinical_nobiop, filter = TRUE, batch = "svaseq",
                                           transform = "log2", convert = "cpm"))
clinical_nobiop_batch_pca <- plot_pca(hs_clinical_nobiop_nb,
                                      plot_title = "PCA - clinical samples without biopsies",
                                      plot_labels = FALSE)
pp(file = "images/clinical_batch.png", image = clinical_nobiop_batch_pca$plot)
test <- plot_pca(hs_clinical_nobiop_nb, size_column = "visitnumber",
                 plot_title = "PCA - clinical samples without biopsies",
                 plot_labels = FALSE)
test$plot

clinical_nobiop_batch_tsne <- plot_tsne(hs_clinical_nobiop_nb,
                                        plot_title = "tSNE - clinical samples without biopsies",
                                        plot_labels = FALSE)
clinical_nobiop_batch_tsne$plot
```

#### Look at remaining variance with variancePartition

```{r variance_partition}
test <- simple_varpart(hs_clinical_nobiop)
test$partition_plot
```

## Perform DE of the clinical samples cure vs. fail

```{r clinical_de, fig.show="hide"}
individual_celltypes <- subset_expt(hs_clinical_nobiop, subset="condition!='lost'")
hs_clinic_de <- sm(all_pairwise(individual_celltypes, model_batch = "svaseq", filter = TRUE))

hs_clinic_table <- sm(combine_de_tables(
    hs_clinic_de,
    excel = glue::glue("excel/individual_celltypes_table-v{ver}.xlsx")))

hs_clinic_sig <- sm(extract_significant_genes(
    hs_clinic_table,
    excel = glue::glue("excel/individual_celltypes_sig-v{ver}.xlsx")))

hs_clinic_sig[["summary_df"]]
```

```{r de_heatmap}
hs_clinic_de[["comparison"]][["heat"]]
```

### Perform LRT with the clinical samples

I am not sure if we have enough samples across the three visit to
completely work as well as we would like, but there is only 1 way to
find out!  Now that I think about it, one thing which might be awesome
is to use cell type as an interacting factor...

#### With biopsy samples

I figure this might be a place where the biopsy samples might prove useful.

```{r lrt_test}
clinical_nolost <- subset_expt(hs_clinical, subset="condition!='lost'")
lrt_visit_clinical_test <- deseq_lrt(clinical_nolost, transform = "vst",
                                     interactor_column = "visitnumber",
                                     interest_column = "clinicaloutcome")
lrt_visit_clinical_test[["favorite_genes"]]

lrt_celltype_clinical_test <- deseq_lrt(clinical_nolost, transform = "vst",
                                        interactor_column = "typeofcells",
                                        interest_column = "clinicaloutcome")
lrt_celltype_clinical_test[["favorite_genes"]]
```

### Look at only the differential genes

A good suggestion from Theresa was to examine only the most variant
genes from failure vs. cure and see how they change the clustering/etc
results.  This is my attempt to address this query.

```{r small_explore}
hs_clinic_topn <- sm(extract_significant_genes(hs_clinic_table, n = 100))
table <- "failure_vs_cure"
wanted <- rbind(hs_clinic_topn[["deseq"]][["ups"]][[table]],
                hs_clinic_topn[["deseq"]][["downs"]][[table]])

small_expt <- exclude_genes_expt(hs_clinical_nobiop, ids = rownames(wanted), method = "keep")
small_norm <- sm(normalize_expt(small_expt, transform = "log2", convert = "cpm",
                                norm = "quant", filter = TRUE))
plot_pca(small_norm)$plot

small_nb <- normalize_expt(small_expt, transform = "log2", convert = "cpm",
                           batch = "svaseq", norm = "quant", filter = TRUE)
plot_pca(small_nb)$plot
```

```{r clinical_plot}
## DESeq2 MA plot of failure / cure
hs_clinic_table[["plots"]][["failure_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure
hs_clinic_table[["plots"]][["failure_vs_cure"]][["deseq_vol_plots"]]$plot
```

### g:Profiler results using the significant up and down genes

```{r perform_gprofiler}
ups <- hs_clinic_sig[["deseq"]][["ups"]][[1]]
downs <- hs_clinic_sig[["deseq"]][["downs"]][[1]]

hs_clinic_gprofiler_ups <- simple_gprofiler(ups)
hs_clinic_gprofiler_ups[["pvalue_plots"]][["bpp_plot_over"]]
hs_clinic_gprofiler_ups[["pvalue_plots"]][["mfp_plot_over"]]
hs_clinic_gprofiler_ups[["pvalue_plots"]][["reactome_plot_over"]]

##hs_try2 <- simple_gprofiler2(ups)

hs_clinic_gprofiler_downs <- simple_gprofiler(downs)
hs_clinic_gprofiler_downs[["pvalue_plots"]][["bpp_plot_over"]]
hs_clinic_gprofiler_downs[["pvalue_plots"]][["mfp_plot_over"]]
hs_clinic_gprofiler_downs[["pvalue_plots"]][["reactome_plot_over"]]
```

## Perform GSVA on the clinical samples

```{r gsva, fig.show = "hide"}
hs_celltype_gsva_c2 <- sm(simple_gsva(individual_celltypes))
hs_celltype_gsva_c2_sig <- sm(get_sig_gsva_categories(
    hs_celltype_gsva_c2,
    excel = "excel/individual_celltypes_gsva_c2.xlsx"))

broad_c7 <- GSEABase::getGmt("reference/msigdb/c7.all.v7.2.entrez.gmt",
                             collectionType = GSEABase::BroadCollection(category = "c7"),
                             geneIdType = GSEABase::EntrezIdentifier())
hs_celltype_gsva_c7 <- sm(simple_gsva(individual_celltypes, signatures = broad_c7,
                                      msig_xml = "reference/msigdb_v7.2.xml", cores = 10))
hs_celltype_gsva_c7_sig <- sm(get_sig_gsva_categories(
    hs_celltype_gsva_c7,
    excel = "excel/individual_celltypes_gsva_c7.xlsx"))
```

### Print some plots of the GSVA outputs

```{r gsva_plots}
## The raw heatmap of the C2 values
hs_celltype_gsva_c2_sig[["raw_plot"]]
## The 'significance' scores of the C2 values
hs_celltype_gsva_c2_sig[["score_plot"]]
## The subset of scores for categories deemed significantly different.
hs_celltype_gsva_c2_sig[["subset_plot"]]

## The raw heatmap of the C7 values
hs_celltype_gsva_c7_sig[["raw_plot"]]
## The 'significance' scores of the C7 values
hs_celltype_gsva_c7_sig[["score_plot"]]
## The subset of scores for categories deemed significantly different.
hs_celltype_gsva_c7_sig[["subset_plot"]]
```

# Individual Cell types

The following blocks split the samples into a few groups by sample type and look
at the distributions between them.

## Implementation details

Get top/bottom n genes for each cell type, using clinical outcome as the factor of interest.
For the moment, use sva for the DE analysis.
Provide cpms for the top/bottom n genes.

Start with top/bottom 200.
Perform default logFC and p-value as well.

### Shared contrasts

Here is the contrast we will use throughput, I am leaving open the option to add more.

```{r keepers}
keepers <- list(
  "fail_vs_cure" = c("failure", "cure"))
```

## Monocytes

### Evaluate Monocyte samples

```{r monocytes}
mono <- subset_expt(hs_valid, subset = "typeofcells=='monocytes'") %>%
  set_expt_conditions(fact = "clinicaloutcome") %>%
  set_expt_batches(fact = "donor") %>%
  set_expt_colors(colors = chosen_colors)
## FIXME set_expt_colors should speak up if there are mismatches here!!!

save_result <- save(mono, file = "rda/monocyte_expt.rda")
mono_norm <- normalize_expt(mono, convert = "cpm", filter = TRUE,
                            transform = "log2", norm = "quant")
plt <- plot_pca(mono_norm, plot_labels = FALSE)$plot
pp(file = glue("images/mono_pca_normalized-v{ver}.pdf"), image = plt)

mono_nb <- normalize_expt(mono, convert = "cpm", filter = TRUE,
                          transform = "log2", batch = "svaseq")
plt <- plot_pca(mono_nb, plot_labels = FALSE)$plot
pp(file = glue("images/mono_pca_normalized_batch-v{ver}.pdf"), image = plt)
```

### DE of Monocyte samples

#### Without sva

```{r de_monocyte, fig.show = "hide"}
mono_de <- sm(all_pairwise(mono, model_batch = FALSE, filter = TRUE))
mono_tables <- sm(combine_de_tables(
    mono_de, keepers = keepers,
    excel = glue::glue("excel/monocyte_clinical_all_tables-v{ver}.xlsx")))
written <- write_xlsx(data = mono_tables[["data"]][[1]],
                      excel = glue::glue("excel/monocyte_clinical_table-v{ver}.xlsx"))
mono_sig <- sm(extract_significant_genes(mono_tables, according_to = "deseq"))
written <- write_xlsx(data = mono_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/monocyte_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = mono_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/monocyte_clinical_sigdown-v{ver}.xlsx"))

mono_pct_sig <- sm(extract_significant_genes(mono_tables, n = 200,
                                             lfc = NULL, p = NULL, according_to = "deseq"))
written <- write_xlsx(data = mono_pct_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/monocyte_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = mono_pct_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/monocyte_clinical_sigdown_pct-v{ver}.xlsx"))
mono_sig$summary_df

## Print out a table of the cpm values for other explorations.
mono_cpm <- sm(normalize_expt(mono, convert = "cpm"))
written <- write_xlsx(data = exprs(mono_cpm),
                      excel = glue::glue("excel/monocyte_cpm_before_batch-v{ver}.xlsx"))
mono_bcpm <- sm(normalize_expt(mono, filter = TRUE, convert = "cpm", batch = "svaseq"))
written <- write_xlsx(data = exprs(mono_bcpm),
                      excel = glue::glue("excel/monocyte_cpm_after_batch-v{ver}.xlsx"))
```

#### With sva

```{r de_mono_sva, fig.show = "hide"}
mono_de_sva <- sm(all_pairwise(mono, model_batch = "svaseq", filter = TRUE))
mono_tables_sva <- sm(combine_de_tables(
    mono_de_sva, keepers = keepers,
    excel = glue::glue("excel/monocyte_clinical_all_tables_sva-v{ver}.xlsx")))
mono_sig_sva <- sm(extract_significant_genes(
    mono_tables_sva,
    excel = glue::glue("excel/monocyte_clinical_sig_tables_sva-v{ver}.xlsx"),
    according_to = "deseq"))
```

#### Monocyte DE plots

First print out the DE plots without and then with sva estimates.

```{r mono_de_plots}
## DESeq2 MA plot of failure / cure
mono_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure
mono_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot

## DESeq2 MA plot of failure / cure with svaseq
mono_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure with svaseq
mono_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
```

#### Monocyte ontology search

```{r mono_gprofiler}
ups <- mono_sig[["deseq"]][["ups"]][["fail_vs_cure"]]
downs <- mono_sig[["deseq"]][["downs"]][["fail_vs_cure"]]

mono_up_gp <- simple_gprofiler(sig_genes = ups)
mono_up_gp[["pvalue_plots"]][["bpp_plot_over"]]
mono_up_gp[["pvalue_plots"]][["mfp_plot_over"]]
mono_up_gp[["pvalue_plots"]][["reactome_plot_over"]]

mono_down_gp <- simple_gprofiler(sig_genes = downs)
mono_down_gp[["pvalue_plots"]][["bpp_plot_over"]]
mono_down_gp[["pvalue_plots"]][["mfp_plot_over"]]
mono_down_gp[["pvalue_plots"]][["reactome_plot_over"]]
```

#### Monocyte MSigDB query

```{r msig_mono_goseq, fig.show = "hide"}
broad_c7 <- GSEABase::getGmt("reference/msigdb/c7.all.v7.2.entrez.gmt",
                             collectionType = GSEABase::BroadCollection(category = "c7"),
                             geneIdType = GSEABase::EntrezIdentifier())

mono_up_goseq_msig <- goseq_msigdb(sig_genes = ups, signatures = broad_c7,
                                   signature_category = "c7", length_db = hs_length)

mono_down_goseq_msig <- goseq_msigdb(sig_genes = downs, signatures = broad_c7,
                                     signature_category = "c7", length_db = hs_length)
```

#### Plot of similar experiments

```{r msig_plots}
## Monocyte genes with increased expression in the failed samples
## share genes with the following experiments
mono_up_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]

## Monocyte genes with increased expression in the cured samples
## share genes with the following experiments
mono_down_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
```

### Evaluate Neutrophil samples

```{r neutrophils}
neut <- subset_expt(hs_valid, subset = "typeofcells=='neutrophils'") %>%
  set_expt_conditions(fact = "clinicaloutcome") %>%
  set_expt_batches(fact = "donor") %>%
  set_expt_colors(colors = chosen_colors)

save_result <- save(neut, file = "rda/neutrophil_expt.rda")
neut_norm <- sm(normalize_expt(neut, convert = "cpm", filter = TRUE, transform = "log2"))
plt <- plot_pca(neut_norm, plot_labels = FALSE)$plot
pp(file = glue("images/neut_pca_normalized-v{ver}.pdf"), image = plt)

neut_nb <- sm(normalize_expt(neut, convert = "cpm", filter = TRUE,
                             transform = "log2", batch = "svaseq"))
plt <- plot_pca(neut_nb, plot_labels = FALSE)$plot
pp(file = glue("images/neut_pca_normalized_svaseq-v{ver}.pdf"), image = plt)
```

### DE of Netrophil samples

#### Without sva

```{r neutrophil_de, fig.show = "hide"}
neut_de <- sm(all_pairwise(neut, model_batch = FALSE, filter = TRUE))
neut_tables <- sm(combine_de_tables(
    neut_de, keepers = keepers,
    excel = glue::glue("excel/neutrophil_clinical_all_tables-v{ver}.xlsx")))
written <- write_xlsx(data = neut_tables[["data"]][[1]],
                      excel = glue::glue("excel/neutrophil_clinical_table-v{ver}.xlsx"))
neut_sig <- sm(extract_significant_genes(neut_tables, according_to = "deseq"))
written <- write_xlsx(data = neut_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/neutrophil_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = neut_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/neutrophil_clinical_sigdown-v{ver}.xlsx"))

neut_pct_sig <- sm(extract_significant_genes(neut_tables, n = 200, lfc = NULL,
                                             p = NULL, according_to = "deseq"))
written <- write_xlsx(data = neut_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/neutrophil_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = neut_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/neutrophil_clinical_sigdown_pct-v{ver}.xlsx"))
neut_cpm <- sm(normalize_expt(neut, convert = "cpm"))
written <- write_xlsx(data = exprs(neut_cpm),
                      excel = glue::glue("excel/neutrophil_cpm_before_batch-v{ver}.xlsx"))
neut_bcpm <- sm(normalize_expt(neut, filter = TRUE, batch = "svaseq", convert = "cpm"))
written <- write_xlsx(data = exprs(neut_bcpm),
                      excel = glue::glue("excel/neutrophil_cpm_after_batch-v{ver}.xlsx"))
```

#### With sva

```{r de_neut_sva, fig.show = "hide"}
neut_de_sva <- sm(all_pairwise(neut, model_batch = "svaseq", filter = TRUE))
neut_tables_sva <- sm(combine_de_tables(
    neut_de_sva, keepers = keepers,
    excel = glue::glue("excel/neutrophil_clinical_all_tables_sva-v{ver}.xlsx")))
neut_sig_sva <- sm(extract_significant_genes(
    neut_tables_sva,
    excel = glue::glue("excel/neutrophil_clinical_sig_tables_sva-v{ver}.xlsx"),
    according_to = "deseq"))
```

#### Neutrophil DE plots

```{r neut_de_plots}
## DESeq2 MA plot of failure / cure
neut_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure
neut_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot

## DESeq2 MA plot of failure / cure with sva
neut_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure with sva
neut_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
```

#### Neutrophil ontology search

```{r neut_gp}
ups <- neut_sig[["deseq"]][["ups"]][["fail_vs_cure"]]
downs <- neut_sig[["deseq"]][["downs"]][["fail_vs_cure"]]

neut_up_gp <- simple_gprofiler(sig_genes = ups)
neut_up_gp[["pvalue_plots"]][["bpp_plot_over"]]
neut_up_gp[["pvalue_plots"]][["mfp_plot_over"]]
neut_up_gp[["pvalue_plots"]][["reactome_plot_over"]]

neut_down_gp <- simple_gprofiler(downs)
neut_down_gp[["pvalue_plots"]][["bpp_plot_over"]]
neut_down_gp[["pvalue_plots"]][["mfp_plot_over"]]
neut_down_gp[["pvalue_plots"]][["reactome_plot_over"]]
```

#### Neutrophil GSVA query

```{r msig_neut_goseq, fig.show = "hide"}
neut_up_goseq_msig <- goseq_msigdb(sig_genes = ups, signatures = broad_c7,
                                   signature_category = "c7", length_db = hs_length)

neut_down_goseq_msig <- goseq_msigdb(sig_genes = downs, signatures = broad_c7,
                                     signature_category = "c7", length_db = hs_length)
```

#### Plot of similar experiments

```{r msig_plots_neut}
## Neutrophil genes with increased expression in the failed samples
## share genes with the following experiments
neut_up_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]

## Neutrophil genes with increased expression in the cured samples
## share genes with the following experiments
neut_down_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
```

## Eosinophils

### Evaluate Eosinophil samples

```{r eosinophils}
eo <- subset_expt(hs_valid, subset = "typeofcells=='eosinophils'") %>%
  set_expt_conditions(fact = "clinicaloutcome") %>%
  set_expt_batches(fact = "donor") %>%
  set_expt_colors(colors = chosen_colors)

save_result <- save(eo, file = "rda/eosinophil_expt.rda")
eo_norm <- sm(normalize_expt(eo, convert = "cpm", transform = "log2",
                             norm = "quant", filter = TRUE))
plt <- plot_pca(eo_norm, plot_labels = FALSE)$plot
pp(file = glue("images/eo_pca_normalized-v{ver}.pdf"), image = plt)

eo_nb <- sm(normalize_expt(eo, convert = "cpm", transform = "log2",
                           filter = TRUE, batch = "svaseq"))
plot_pca(eo_nb)$plot
```

### DE of Eosinophil samples

#### Withouth sva

```{r eosinophil_de, fig.show = "hide"}
eo_de <- sm(all_pairwise(eo, model_batch = FALSE, filter = TRUE))
eo_tables <- sm(combine_de_tables(
    eo_de, keepers = keepers,
    excel = glue::glue("excel/eosinophil_clinical_all_tables-v{ver}.xlsx")))
written <- write_xlsx(data = eo_tables[["data"]][[1]],
                      excel = glue::glue("excel/eosinophil_clinical_table-v{ver}.xlsx"))
eo_sig <- sm(extract_significant_genes(eo_tables, according_to = "deseq"))
written <- write_xlsx(data = eo_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/eosinophil_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = eo_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/eosinophil_clinical_sigdown-v{ver}.xlsx"))

eo_pct_sig <- sm(extract_significant_genes(eo_tables, n = 200,
                                           lfc = NULL, p = NULL, according_to = "deseq"))
written <- write_xlsx(data = eo_pct_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/eosinophil_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = eo_pct_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/eosinophil_clinical_sigdown_pct-v{ver}.xlsx"))

eo_cpm <- sm(normalize_expt(eo, convert = "cpm"))
written <- write_xlsx(data = exprs(eo_cpm),
                      excel = glue::glue("excel/eosinophil_cpm_before_batch-v{ver}.xlsx"))
eo_bcpm <- sm(normalize_expt(eo, filter = TRUE, batch = "svaseq", convert = "cpm"))
written <- write_xlsx(data = exprs(eo_bcpm),
                      excel = glue::glue("excel/eosinophil_cpm_after_batch-v{ver}.xlsx"))
```

#### With sva

```{r de_eo_sva, fig.show = "hide"}
eo_de_sva <- sm(all_pairwise(eo, model_batch = "svaseq", filter = TRUE))
eo_tables_sva <- sm(combine_de_tables(
    eo_de_sva, keepers = keepers,
    excel = glue::glue("excel/eosinophil_clinical_all_tables_sva-v{ver}.xlsx")))
eo_sig_sva <- sm(extract_significant_genes(
    eo_tables_sva,
    excel = glue::glue("excel/eosinophil_clinical_sig_tables_sva-v{ver}.xlsx"),
    according_to = "deseq"))
```

#### Eosinophil DE plots

```{r eo_de_plots}
## DESeq2 MA plot of failure / cure
eo_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure
eo_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot

## DESeq2 MA plot of failure / cure with sva
eo_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure with sva
eo_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
```

#### Eosinophil ontology search

```{r eo_gprofiler}
ups <- eo_sig[["deseq"]][["ups"]][["fail_vs_cure"]]
downs <- eo_sig[["deseq"]][["downs"]][["fail_vs_cure"]]

eo_up_gp <- simple_gprofiler(sig_genes = ups)
eo_up_gp[["pvalue_plots"]][["bpp_plot_over"]]
eo_up_gp[["pvalue_plots"]][["mfp_plot_over"]]
eo_up_gp[["pvalue_plots"]][["reactome_plot_over"]]

eo_down_gp <- simple_gprofiler(downs)
eo_down_gp[["pvalue_plots"]][["bpp_plot_over"]]
eo_down_gp[["pvalue_plots"]][["mfp_plot_over"]]
eo_down_gp[["pvalue_plots"]][["reactome_plot_over"]]
```

#### Eosinophil MSigDB query

```{r msig_eo_goseq, fig.show = "hide"}
eo_up_goseq_msig <- goseq_msigdb(sig_genes = ups, signatures = broad_c7,
                                 signature_category = "c7", length_db = hs_length)

eo_down_goseq_msig <- goseq_msigdb(sig_genes = downs, signatures = broad_c7,
                                   signature_category = "c7", length_db = hs_length)
```

#### Plot of similar experiments

```{r msig_plots_eo}
## Eosinophil genes with increased expression in the failed samples
## share genes with the following experiments
eo_up_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]

## Eosinophil genes with increased expression in the cured samples
## share genes with the following experiments
eo_down_goseq_msig[["pvalue_plots"]][["mfp_plot_over"]]
```

## Biopsies

### Evaluate Biopsy samples

```{r biopsies}
biop <- subset_expt(hs_valid, subset = "typeofcells=='biopsy'") %>%
  set_expt_conditions(fact = "clinicaloutcome") %>%
  set_expt_batches(fact = "donor") %>%
  set_expt_colors(colors = chosen_colors)

save_result <- save(biop, file = "rda/biopsy_expt.rda")
biop_norm <- normalize_expt(biop, filter = TRUE, convert = "cpm",
                            transform = "log2", norm = "quant")
plt <- plot_pca(biop_norm, plot_labels = FALSE)$plot
pp(file = glue("images/biop_pca_normalized-v{ver}.pdf"), image = plt)

biop_nb <- sm(normalize_expt(biop, convert = "cpm", filter = TRUE,
                             transform = "log2", batch = "svaseq"))
plt <- plot_pca(biop_nb, plot_labels = FALSE)$plot
pp(file = glue("images/biop_pca_normalized_svaseq-v{ver}.pdf"), image = plt)
```

### DE of Biopsy samples

#### Without sva

```{r de_biopsy, fig.show = "hide"}
biop_de <- sm(all_pairwise(biop, model_batch = FALSE, filter = TRUE))
biop_tables <- combine_de_tables(biop_de, keepers = keepers,
                                 excel = glue::glue("excel/biopsy_clinical_all_tables-v{ver}.xlsx"))
written <- write_xlsx(data = biop_tables[["data"]][[1]],
                      excel = glue::glue("excel/biopsy_clinical_table-v{ver}.xlsx"))
biop_sig <- extract_significant_genes(biop_tables, according_to = "deseq")
##written <- write_xlsx(data = biop_sig[["deseq"]][["ups"]][[1]],
##                      excel = glue::glue("excel/biopsy_clinical_sigup-v{ver}.xlsx"))
written <- write_xlsx(data = biop_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/biopsy_clinical_sigdown-v{ver}.xlsx"))
biop_pct_sig <- extract_significant_genes(biop_tables, n = 200, lfc = NULL, p = NULL, according_to = "deseq")
written <- write_xlsx(data = biop_pct_sig[["deseq"]][["ups"]][[1]],
                      excel = glue::glue("excel/biopsy_clinical_sigup_pct-v{ver}.xlsx"))
written <- write_xlsx(data = biop_pct_sig[["deseq"]][["downs"]][[1]],
                      excel = glue::glue("excel/biopsy_clinical_sigdown_pct-v{ver}.xlsx"))

biop_cpm <- sm(normalize_expt(biop, convert = "cpm"))
written <- write_xlsx(data = exprs(biop_cpm),
                      excel = glue::glue("excel/biopsy_cpm_before_batch-v{ver}.xlsx"))
biop_bcpm <- sm(normalize_expt(biop, filter = TRUE, batch = "svaseq", convert = "cpm"))
written <- write_xlsx(data = exprs(biop_bcpm),
                      excel = glue::glue("excel/biopsy_cpm_after_batch-v{ver}.xlsx"))
```

#### with sva

```{r de_biopsy_sva, fig.show = "hide"}
biop_de_sva <- sm(all_pairwise(biop, model_batch = "svaseq", filter = TRUE))
biop_tables_sva <- sm(combine_de_tables(
    biop_de_sva, keepers = keepers,
    excel = glue::glue("excel/biopsy_clinical_all_tables_sva-v{ver}.xlsx")))
biop_sig_sva <- sm(extract_significant_genes(
    biop_tables_sva,
    excel = glue::glue("excel/biopsy_clinical_sig_tables_sva-v{ver}.xlsx"),
    according_to = "deseq"))
```

#### Biopsy DE plots

```{r biop_de_plots}
## DESeq2 MA plot of failure / cure
biop_tables[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure
biop_tables[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot

## DESeq2 MA plot of failure / cure
biop_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_ma_plots"]]$plot

## DESeq2 Volcano plot of failure / cure
biop_tables_sva[["plots"]][["fail_vs_cure"]][["deseq_vol_plots"]]$plot
```

# Look for shared genes among Monocytes/Neutrophils/Eosinophils

We have three variables containing the 'significant' DE genes for the
three cell types.  For this I am choosing (for the moment) to use the
sva data.

```{r shared_by_type}
## mono_sig_sva, neut_sig_sva, eo_sig_sva
sig_vectors <- list(
    "monocytes" = c(rownames(mono_sig_sva[["deseq"]][["ups"]][["fail_vs_cure"]]),
                    rownames(mono_sig_sva[["deseq"]][["downs"]][["fail_vs_cure"]])),
    "neutrophils" = c(rownames(neut_sig_sva[["deseq"]][["ups"]][["fail_vs_cure"]]),
                      rownames(neut_sig_sva[["deseq"]][["downs"]][["fail_vs_cure"]])),
    "eosinophils" =  c(rownames(eo_sig_sva[["deseq"]][["ups"]][["fail_vs_cure"]]),
                       rownames(eo_sig_sva[["deseq"]][["downs"]][["fail_vs_cure"]])))

shared_vector <- Vennerable::Venn(Sets = sig_vectors)
Vennerable::plot(shared_vector, doWeights = FALSE)

shared_ids <- shared_vector@IntersectionSets[["111"]]
shared_expt <- exclude_genes_expt(hs_expt, ids = shared_ids, method = "keep")
shared_written <- sm(write_expt(shared_expt, excel="excel/genes_shared_across_celltypes.xlsx"))
```

# Monocytes by visit

 1. Can you please share with us a PCA (SVA and non-SVA) of the
    monocytes of the TMRC3 project, but labeling them based on the visit
    (V1, V2, V3)?
 2. Can you please share DE lists of V1 vs V2, V1 vs V3, V1 vs. V2+V3
    and V2 vs V3?

```{r monocytes_by_visit}
visit_colors <- chosen_colors <- c("#D95F02", "#7570B3", "#1B9E77")
names(visit_colors) <- c(1, 2, 3)
mono_visit <- subset_expt(hs_valid, subset = "typeofcells=='monocytes'") %>%
  set_expt_conditions(fact = "visitnumber") %>%
  set_expt_batches(fact = "clinicaloutcome") %>%
  set_expt_colors(colors = chosen_colors)

mono_visit_norm <- normalize_expt(mono_visit, filter = TRUE, norm = "quant", convert = "cpm",
                                  transform = "log2")
mono_visit_pca <- plot_pca(mono_visit_norm)
pp(file = "images/monocyte_by_visit.png", image = mono_visit_pca$plot)

mono_visit_nb <- normalize_expt(mono_visit, filter = TRUE, convert = "cpm",
                                batch = "svaseq", transform = "log2")
mono_visit_nb_pca <- plot_pca(mono_visit_nb)
pp(file = "images/monocyte_by_visit_nb.png", image = mono_visit_nb_pca$plot)

table(pData(mono_visit_norm)$batch)
```

```{r mono_visit_de, fig.show = "hide"}
keepers <- list(
    "second_vs_first" = c("c2", "c1"),
    "third_vs_second" = c("c3", "c2"),
    "third_vs_first" = c("c3", "c1"))
mono_visit_de <- all_pairwise(mono_visit, model_batch = "svaseq", filter = TRUE)

mono_visit_tables <- combine_de_tables(
    mono_visit_de,
    keepers = keepers,
    excel = glue::glue("excel/mono_visit_tables-v{ver}.xlsx"))
```

```{r v1_vs_all}
new_factor <- pData(mono_visit)[["visitnumber"]]
not_one_idx <- new_factor != 1
new_factor[not_one_idx] <- "not_1"
mono_one_vs <- set_expt_conditions(mono_visit, new_factor)

mono_one_vs_de <- all_pairwise(mono_one_vs, model_batch = "svaseq", filter = TRUE)

mono_one_vs_tables <- combine_de_tables(
    mono_one_vs_de,
    excel = glue::glue("excel/mono_one_vs_tables-v{ver}.xlsx"))
```

# Test TSP

In writing the following, I quickly realized that tspair was not
joking when it said it is intended for small numbers of genes.  For a
full expressionset of human data it is struggling.  I like the idea,
it may prove worth while to spend some time optimizing the package so
that it is more usable.

```{r tsp, eval = FALSE}
expt <- hs_clinical_nobiop

simple_tsp <- function(expt, column = "condition") {
  facts <- levels(as.factor(pData(expt)[[column]]))
  retlist <- list()
  if (length(facts) < 2) {
    stop("This requires factors with at least 2 levels.")
  } else if (length(facts) == 2) {
    retlist <- simple_tsp_pair(expt, column = column)
  } else {
    for (first in 1:(length(facts) - 1)) {
      for (second in 2:(length(facts))) {
        if (first < second) {
          name <- glue::glue("{facts[first]}_vs_{facts[second]}")
          message("Starting ", name, ".")
          substring <- glue::glue("{column}=='{facts[first]}'|{column}=='{facts[second]}'")
          subby <- subset_expt(expt, subset=as.character(substring))
          retlist[[name]] <- simple_tsp_pair(subby, column = column)
        }
      }
    }
  }
}

simple_tsp_pair <- function(subby, column = "condition", repetitions = 50) {
  tsp_input <- subby[["expressionset"]]
  tsp_output <- tspcalc(tsp_input, column)
  tsp_scores <- tspsig(tsp_input, column, B = repetitions)
}

tsp1 <- tspcalc(tsp_input, "condition")

```

```{r saveme}
if (!isTRUE(get0("skip_load"))) {
  pander::pander(sessionInfo())
  message(paste0("This is hpgltools commit: ", get_git_commit()))
  message(paste0("Saving to ", savefile))
  tmp <- sm(saveme(filename = savefile))
}
```

```{r loadme_after, eval = FALSE}
tmp <- loadme(filename = savefile)
```
